View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5587-Insertion-1 (Length: 205)
Name: NF5587-Insertion-1
Description: NF5587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5587-Insertion-1 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 53039411 - 53039213
Alignment:
| Q |
7 |
aaactatagtatgtagcttctccatattcaattccactcaaaagaagttgcgatgcggatttaagttttatggctttattcatttccttatcatcacgta |
106 |
Q |
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| T |
53039411 |
aaactatagtatgtagcttctccatattcaattccactcaaaagaagttgcgacgcggatttaagttttatggctttattcatttccttatcatcacgta |
53039312 |
T |
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| Q |
107 |
ttattagtgtatggatcgtgatactgtaactatacaatatattttgagtgtgaaccgtggtgtctggataggttagtcattaattaatgtatacaggtg |
205 |
Q |
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| T |
53039311 |
ttattagtgtatggatcgtgatactgtaactatacaatatattttgagtgtgagccgtggtgtctggataggttagtcattaattaatgtatacaggtg |
53039213 |
T |
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