View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5588-Insertion-4 (Length: 866)

Name: NF5588-Insertion-4
Description: NF5588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5588-Insertion-4
NF5588-Insertion-4
[»] chr2 (45 HSPs)
chr2 (12-593)||(41265147-41265732)
chr2 (576-713)||(41264996-41265133)
chr2 (356-569)||(30907235-30907455)
chr2 (436-557)||(21813209-21813330)
chr2 (358-567)||(39376159-39376367)
chr2 (361-512)||(27893023-27893174)
chr2 (783-866)||(41264819-41264902)
chr2 (371-483)||(30907073-30907184)
chr2 (371-483)||(31263923-31264035)
chr2 (356-539)||(34336018-34336210)
chr2 (360-483)||(27893574-27893697)
chr2 (369-557)||(31264089-31264288)
chr2 (373-483)||(34429681-34429791)
chr2 (375-513)||(39301807-39301945)
chr2 (375-483)||(31263987-31264095)
chr2 (369-483)||(16781062-16781177)
chr2 (369-516)||(36196475-36196629)
chr2 (404-516)||(20535934-20536046)
chr2 (352-483)||(34336287-34336418)
chr2 (375-483)||(30907136-30907244)
chr2 (372-483)||(11871764-11871875)
chr2 (357-476)||(37543100-37543219)
chr2 (358-424)||(21813191-21813257)
chr2 (381-498)||(37542956-37543072)
chr2 (423-498)||(5116895-5116970)
chr2 (375-440)||(19080691-19080756)
chr2 (361-516)||(19080617-19080781)
chr2 (372-483)||(8260384-8260495)
chr2 (476-516)||(20535555-20535595)
chr2 (380-483)||(32341460-32341564)
chr2 (387-483)||(39376360-39376456)
chr2 (364-419)||(41265100-41265155)
chr2 (380-437)||(19081067-19081124)
chr2 (437-484)||(16780943-16780990)
chr2 (380-427)||(27893570-27893617)
chr2 (380-483)||(34336227-34336330)
chr2 (412-483)||(39376420-39376491)
chr2 (356-434)||(151640-151717)
chr2 (474-528)||(5117038-5117092)
chr2 (377-423)||(20535967-20536013)
chr2 (382-427)||(11871760-11871805)
chr2 (362-423)||(16780928-16780989)
chr2 (375-436)||(16781049-16781110)
chr2 (358-438)||(20535487-20535568)
chr2 (575-604)||(27893659-27893688)
[»] chr6 (33 HSPs)
chr6 (356-557)||(16168449-16168650)
chr6 (369-512)||(2839622-2839765)
chr6 (358-569)||(20575398-20575619)
chr6 (362-516)||(11527526-11527680)
chr6 (353-516)||(2840032-2840195)
chr6 (357-569)||(32417631-32417852)
chr6 (357-569)||(32423472-32423693)
chr6 (361-483)||(16168704-16168826)
chr6 (359-514)||(28630599-28630754)
chr6 (376-483)||(32417533-32417640)
chr6 (376-483)||(32423374-32423481)
chr6 (357-516)||(17180110-17180278)
chr6 (371-483)||(32417468-32417580)
chr6 (371-483)||(32423309-32423421)
chr6 (372-516)||(10862558-10862712)
chr6 (371-485)||(9902276-9902390)
chr6 (401-516)||(9946685-9946800)
chr6 (356-498)||(20575646-20575785)
chr6 (357-513)||(11528019-11528184)
chr6 (375-483)||(16168644-16168752)
chr6 (404-483)||(24139521-24139600)
chr6 (380-483)||(17179632-17179735)
chr6 (423-483)||(20575610-20575670)
chr6 (380-424)||(24139520-24139564)
chr6 (474-513)||(10407716-10407755)
chr6 (381-440)||(17179693-17179752)
chr6 (474-516)||(10962849-10962891)
chr6 (461-514)||(24139087-24139140)
chr6 (357-409)||(17131546-17131598)
chr6 (375-427)||(20575606-20575658)
chr6 (474-513)||(10407360-10407399)
chr6 (474-512)||(9902010-9902048)
chr6 (445-483)||(17132228-17132266)
[»] chr7 (79 HSPs)
chr7 (357-569)||(31893235-31893447)
chr7 (355-516)||(5559599-5559758)
chr7 (369-513)||(1441416-1441560)
chr7 (371-498)||(31893474-31893601)
chr7 (446-566)||(36566443-36566563)
chr7 (357-483)||(5805023-5805149)
chr7 (362-557)||(34951218-34951421)
chr7 (361-483)||(33879529-33879651)
chr7 (353-513)||(27995042-27995211)
chr7 (362-515)||(28256918-28257071)
chr7 (371-514)||(39958686-39958829)
chr7 (369-483)||(1286367-1286481)
chr7 (430-569)||(4187608-4187756)
chr7 (357-516)||(5559092-5559262)
chr7 (371-516)||(35214805-35214960)
chr7 (372-516)||(8040127-8040270)
chr7 (362-553)||(19925272-19925472)
chr7 (369-512)||(33235031-33235183)
chr7 (352-483)||(34951475-34951606)
chr7 (361-483)||(36566267-36566389)
chr7 (357-514)||(23150624-23150790)
chr7 (371-483)||(21412865-21412977)
chr7 (380-483)||(21412934-21413037)
chr7 (361-569)||(21413028-21413244)
chr7 (355-516)||(8039646-8039799)
chr7 (369-483)||(21433141-21433255)
chr7 (358-483)||(5805607-5805731)
chr7 (355-479)||(40904675-40904798)
chr7 (369-511)||(1346477-1346624)
chr7 (352-483)||(19925085-19925215)
chr7 (358-516)||(20366035-20366200)
chr7 (347-483)||(29591068-29591205)
chr7 (486-557)||(33879405-33879476)
chr7 (422-516)||(10620206-10620300)
chr7 (362-479)||(1286821-1286936)
chr7 (362-483)||(22876867-22876987)
chr7 (375-483)||(36566341-36566449)
chr7 (359-483)||(20366551-20366675)
chr7 (349-512)||(35215299-35215471)
chr7 (360-483)||(39959207-39959330)
chr7 (375-462)||(40904754-40904841)
chr7 (360-483)||(31175970-31176086)
chr7 (521-569)||(21433248-21433296)
chr7 (375-483)||(31893438-31893537)
chr7 (375-483)||(33879470-33879577)
chr7 (380-471)||(5075356-5075446)
chr7 (380-483)||(28256501-28256604)
chr7 (380-513)||(20183778-20183919)
chr7 (462-516)||(28104637-28104691)
chr7 (354-483)||(6220389-6220516)
chr7 (362-479)||(20101813-20101928)
chr7 (380-440)||(10619868-10619928)
chr7 (376-483)||(21433287-21433395)
chr7 (372-424)||(33235564-33235616)
chr7 (380-427)||(21433212-21433259)
chr7 (375-437)||(1286433-1286495)
chr7 (474-516)||(1349120-1349162)
chr7 (357-427)||(1440991-1441061)
chr7 (369-483)||(4187503-4187617)
chr7 (571-609)||(5559711-5559749)
chr7 (474-516)||(10619911-10619953)
chr7 (377-427)||(21412991-21413041)
chr7 (357-483)||(23679544-23679660)
chr7 (446-516)||(42990989-42991058)
chr7 (380-437)||(28256561-28256618)
chr7 (375-440)||(31175953-31176018)
chr7 (362-423)||(36566526-36566587)
chr7 (380-437)||(39959193-39959250)
chr7 (423-483)||(10619851-10619911)
chr7 (430-513)||(33235526-33235618)
chr7 (380-427)||(6220385-6220431)
chr7 (380-427)||(23679540-23679586)
chr7 (380-423)||(34951415-34951458)
chr7 (376-427)||(36566402-36566453)
chr7 (380-438)||(5805592-5805650)
chr7 (571-609)||(19925432-19925470)
chr7 (571-604)||(1441527-1441560)
chr7 (375-440)||(5805101-5805166)
chr7 (406-483)||(34951415-34951492)
[»] chr8 (64 HSPs)
chr8 (358-569)||(45017732-45017952)
chr8 (358-602)||(11113536-11113781)
chr8 (356-569)||(9770713-9770935)
chr8 (357-569)||(36359885-36360106)
chr8 (357-516)||(30576640-30576808)
chr8 (375-516)||(40553228-40553369)
chr8 (358-510)||(14871342-14871496)
chr8 (357-483)||(39701415-39701541)
chr8 (357-498)||(9770545-9770686)
chr8 (358-483)||(16197014-16197139)
chr8 (369-512)||(6236222-6236365)
chr8 (380-513)||(25730106-25730249)
chr8 (377-483)||(9277006-9277112)
chr8 (357-483)||(36360097-36360223)
chr8 (357-569)||(29794186-29794406)
chr8 (380-513)||(25737592-25737735)
chr8 (362-483)||(8713835-8713956)
chr8 (353-516)||(23553335-23553507)
chr8 (359-483)||(25737090-25737214)
chr8 (371-514)||(44041270-44041422)
chr8 (380-513)||(8714337-8714479)
chr8 (375-516)||(39700887-39701037)
chr8 (357-483)||(43422842-43422968)
chr8 (372-483)||(4613739-4613850)
chr8 (361-455)||(36314697-36314791)
chr8 (369-483)||(43423115-43423228)
chr8 (350-427)||(13771885-13771962)
chr8 (435-508)||(23179049-23179122)
chr8 (372-516)||(31169465-31169617)
chr8 (362-483)||(45017943-45018062)
chr8 (380-483)||(9770628-9770722)
chr8 (380-483)||(23553890-23553993)
chr8 (360-427)||(35433884-35433951)
chr8 (380-483)||(41190293-41190396)
chr8 (357-513)||(9276466-9276632)
chr8 (403-479)||(39700855-39700931)
chr8 (400-483)||(43422945-43423028)
chr8 (380-475)||(43423063-43423158)
chr8 (380-438)||(9276991-9277049)
chr8 (380-512)||(16208674-16208815)
chr8 (375-424)||(41190292-41190341)
chr8 (387-475)||(14870954-14871041)
chr8 (357-465)||(29792558-29792666)
chr8 (435-483)||(35433899-35433947)
chr8 (380-427)||(13771425-13771472)
chr8 (377-440)||(16208695-16208758)
chr8 (474-513)||(35434313-35434352)
chr8 (372-423)||(40553261-40553312)
chr8 (364-483)||(40553321-40553440)
chr8 (435-516)||(34686878-34686968)
chr8 (357-422)||(23179032-23179096)
chr8 (380-440)||(5358650-5358710)
chr8 (380-440)||(16197096-16197156)
chr8 (375-427)||(25730141-25730193)
chr8 (356-440)||(29030183-29030267)
chr8 (380-440)||(39701398-39701458)
chr8 (569-604)||(9276478-9276513)
chr8 (376-427)||(23553886-23553937)
chr8 (369-440)||(34686903-34686974)
chr8 (474-513)||(44040872-44040911)
chr8 (446-516)||(5359050-5359120)
chr8 (575-609)||(9770893-9770927)
chr8 (361-483)||(40552750-40552872)
chr8 (576-609)||(36314755-36314788)
[»] scaffold0027 (2 HSPs)
scaffold0027 (371-513)||(9393-9535)
scaffold0027 (380-478)||(9891-9989)
[»] chr4 (49 HSPs)
chr4 (351-516)||(19631742-19631911)
chr4 (380-569)||(26329865-26330063)
chr4 (362-516)||(52183404-52183558)
chr4 (358-512)||(52865942-52866096)
chr4 (357-478)||(22025319-22025440)
chr4 (375-483)||(2788928-2789036)
chr4 (356-483)||(26330020-26330147)
chr4 (369-515)||(8408832-8408987)
chr4 (361-475)||(2788779-2788893)
chr4 (482-557)||(36890577-36890652)
chr4 (357-483)||(43098425-43098551)
chr4 (422-569)||(22025103-22025259)
chr4 (372-483)||(31229254-31229366)
chr4 (361-557)||(43098171-43098371)
chr4 (371-483)||(52568208-52568320)
chr4 (436-513)||(44916294-44916371)
chr4 (375-483)||(43098365-43098473)
chr4 (380-483)||(2909183-2909286)
chr4 (371-498)||(23085205-23085331)
chr4 (454-516)||(30543108-30543170)
chr4 (375-437)||(31229318-31229380)
chr4 (361-498)||(35023735-35023872)
chr4 (374-483)||(41735814-41735923)
chr4 (371-483)||(52181714-52181826)
chr4 (380-483)||(2788988-2789091)
chr4 (380-483)||(9320018-9320121)
chr4 (381-483)||(35046437-35046539)
chr4 (375-440)||(52568191-52568256)
chr4 (380-483)||(5387134-5387237)
chr4 (360-427)||(42116077-42116144)
chr4 (372-427)||(52567743-52567798)
chr4 (474-516)||(8408453-8408495)
chr4 (357-423)||(44916324-44916390)
chr4 (354-427)||(19632255-19632327)
chr4 (414-483)||(26329805-26329874)
chr4 (446-503)||(52866347-52866404)
chr4 (375-438)||(26329945-26330008)
chr4 (478-514)||(19681304-19681340)
chr4 (404-483)||(36890503-36890583)
chr4 (380-427)||(9320078-9320125)
chr4 (372-427)||(35046556-35046611)
chr4 (380-427)||(52181783-52181830)
chr4 (474-513)||(52567794-52567833)
chr4 (377-427)||(5387191-5387241)
chr4 (571-609)||(22025058-22025096)
chr4 (401-483)||(35046560-35046642)
chr4 (362-427)||(2508252-2508317)
chr4 (357-406)||(22025051-22025100)
chr4 (576-609)||(43098174-43098207)
[»] chr1 (29 HSPs)
chr1 (372-516)||(10685848-10685992)
chr1 (353-477)||(11897823-11897947)
chr1 (357-516)||(27351036-27351204)
chr1 (356-513)||(27351518-27351675)
chr1 (369-516)||(10686685-10686841)
chr1 (380-513)||(49650581-49650715)
chr1 (350-483)||(17898861-17898994)
chr1 (359-513)||(48352716-48352879)
chr1 (377-475)||(44964035-44964133)
chr1 (357-529)||(44963824-44964005)
chr1 (401-513)||(49650984-49651096)
chr1 (353-479)||(44964091-44964216)
chr1 (356-483)||(34254483-34254610)
chr1 (369-483)||(29419062-29419176)
chr1 (375-483)||(17898801-17898909)
chr1 (474-557)||(1765804-1765887)
chr1 (432-510)||(4772171-4772249)
chr1 (430-512)||(4772621-4772703)
chr1 (376-483)||(1765881-1765988)
chr1 (380-483)||(1765941-1766044)
chr1 (357-513)||(39302668-39302827)
chr1 (352-427)||(8903288-8903363)
chr1 (452-514)||(4030726-4030788)
chr1 (376-427)||(17898797-17898848)
chr1 (377-423)||(49651014-49651060)
chr1 (474-515)||(2965542-2965583)
chr1 (414-483)||(8902803-8902872)
chr1 (376-427)||(8902825-8902876)
chr1 (474-515)||(48352311-48352352)
[»] scaffold0746 (2 HSPs)
scaffold0746 (373-513)||(509-658)
scaffold0746 (372-513)||(21-170)
[»] chr5 (43 HSPs)
chr5 (369-513)||(35189911-35190054)
chr5 (369-513)||(36417883-36418027)
chr5 (358-516)||(13538455-13538617)
chr5 (361-516)||(20728517-20728681)
chr5 (357-516)||(36418371-36418539)
chr5 (358-479)||(18951289-18951410)
chr5 (369-514)||(5734954-5735107)
chr5 (361-516)||(38405518-38405670)
chr5 (372-516)||(35190393-35190536)
chr5 (411-569)||(6336245-6336412)
chr5 (356-473)||(14235552-14235669)
chr5 (356-483)||(18248942-18249069)
chr5 (380-483)||(32660267-32660370)
chr5 (362-483)||(6336133-6336254)
chr5 (380-512)||(26275512-26275644)
chr5 (380-461)||(18951371-18951452)
chr5 (452-513)||(38082636-38082697)
chr5 (460-516)||(26275979-26276035)
chr5 (380-483)||(30737748-30737851)
chr5 (352-427)||(35891270-35891345)
chr5 (369-483)||(32660196-32660310)
chr5 (491-569)||(32660361-32660439)
chr5 (358-483)||(1722486-1722611)
chr5 (369-513)||(19278702-19278854)
chr5 (358-516)||(13543070-13543240)
chr5 (380-516)||(30738228-30738374)
chr5 (372-514)||(20729017-20729159)
chr5 (356-423)||(31813955-31814022)
chr5 (474-516)||(5734573-5734615)
chr5 (375-427)||(6336206-6336258)
chr5 (371-427)||(32459426-32459482)
chr5 (380-427)||(18249026-18249073)
chr5 (357-483)||(13543615-13543741)
chr5 (357-423)||(26276012-26276078)
chr5 (471-516)||(38405144-38405189)
chr5 (435-483)||(18951306-18951354)
chr5 (375-427)||(32660322-32660374)
chr5 (474-513)||(32459478-32459517)
chr5 (474-516)||(18238309-18238351)
chr5 (435-485)||(31813953-31814003)
chr5 (475-521)||(35890878-35890924)
chr5 (369-419)||(40744971-40745021)
chr5 (422-475)||(18321234-18321287)
[»] scaffold0070 (2 HSPs)
scaffold0070 (373-513)||(28545-28694)
scaffold0070 (461-513)||(29033-29084)
[»] scaffold0019 (5 HSPs)
scaffold0019 (357-480)||(124373-124496)
scaffold0019 (361-483)||(124132-124253)
scaffold0019 (375-478)||(124315-124418)
scaffold0019 (491-569)||(124244-124322)
scaffold0019 (571-609)||(124135-124173)
[»] chr3 (24 HSPs)
chr3 (474-569)||(54456722-54456817)
chr3 (357-483)||(31247657-31247783)
chr3 (371-513)||(50530245-50530386)
chr3 (371-516)||(3088073-3088218)
chr3 (423-515)||(4276597-4276689)
chr3 (454-557)||(5505595-5505698)
chr3 (435-516)||(14629288-14629369)
chr3 (454-523)||(35555947-35556016)
chr3 (372-516)||(35555526-35555680)
chr3 (380-483)||(54456808-54456911)
chr3 (380-481)||(3087090-3087190)
chr3 (401-516)||(21376595-21376719)
chr3 (468-516)||(21376990-21377038)
chr3 (463-514)||(33975069-33975120)
chr3 (357-423)||(14629270-14629336)
chr3 (616-675)||(36902385-36902440)
chr3 (436-483)||(3087086-3087132)
chr3 (474-513)||(4276246-4276285)
chr3 (380-423)||(14964741-14964784)
chr3 (380-427)||(21376634-21376681)
chr3 (369-483)||(4276132-4276246)
chr3 (377-423)||(4276629-4276675)
chr3 (357-419)||(18745502-18745564)
chr3 (571-604)||(35556008-35556041)
[»] scaffold0041 (2 HSPs)
scaffold0041 (355-479)||(45220-45343)
scaffold0041 (375-462)||(45177-45264)
[»] scaffold0374 (4 HSPs)
scaffold0374 (356-428)||(16057-16129)
scaffold0374 (474-513)||(16581-16620)
scaffold0374 (474-516)||(16224-16266)
scaffold0374 (370-427)||(16171-16228)


Alignment Details
Target: chr2 (Bit Score: 427; Significance: 0; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 12 - 593
Target Start/End: Complemental strand, 41265732 - 41265147
Alignment:
Q  12 tgacaaaatctgaagtaatatgaccactatattacgaactatacaaatgaagaacctaa---attttggattgaatatgattaatcaatcacttttgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||   ||| |||||||||||||||||||||||||||||| |||    
T  41265732 tgacaaaatctgaagtaatatgaccactatattacgaactatacaaatgaagaatctaagatattctggattgaatatgattaatcaatcacttttaaaa 41265633  T
Q  109 tggaaaagtactaattaatgtaacagaaaggaaaagaaattcattcacaaggaatattttcttatttatggattccttaatcaatatctttaaagcattc 208  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| |||||| |||||    
T  41265632 tggaaaagtattaattaatgtaacagaaaggaaaagaaatttattcacaagtaatattttcttatttatggattccttaaccaatatttttaaaacattc 41265533  T
Q  209 gatagaaaattcaataaaaaattcttgaaattaagaccatctttattaagggagttttttaagtgacactctaagtcttatgagacaccaacaacttaag 308  Q
    | |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||     
T  41265532 gttagaaaattcaataaaaaattcttgaaactaagaccatctttattaagggagtcttttaagtgacactctaagtcttatgaggcaccaacaacttaaa 41265433  T
Q  309 atcttcaatcttaaatgagacccacannnnnnnaatattaaaaatttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagt 408  Q
    ||||||||||| ||||||||||||||       || |||||||||||||| |||||||||||||||| || ||||||||||| |||||||||||||||||    
T  41265432 atcttcaatctcaaatgagacccacatttttttaaaattaaaaatttaagtccaaatacaacttttgatccttttagtttgagagaattatcaagttagt 41265333  T
Q  409 catttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactat 508  Q
    |||||||||||| |||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41265332 catttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactat 41265233  T
Q  509 ttcacc-gtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaatttttgaaactttttgggaattttgtcaaactaaaa 593  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| | |||||||||||    
T  41265232 ttcaccggtcatcgtttcaaatgtttcaaatatgtccttttagtttgaaatttttgaaactttttgaaaattctatcaaactaaaa 41265147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 576 - 713
Target Start/End: Complemental strand, 41265133 - 41264996
Alignment:
Q  576 aattttgtcaaactaaaaggaccaaaagttgtatctggtcaaaatttaaaatataatgatacttataaagttattgataattgattagtgaatttcattt 675  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41265133 aattatgtcaaactaaaatgaccaaaagttgtatctgatcaaaatttaaaatataatgatacttataaagttattgataattgattagtgaatttcattt 41265034  T
Q  676 nnnnnnnttgtgtgagatgttaggttgaaaggattgag 713  Q
           |||||||||||||||||||||||||||||||    
T  41265033 aaaaaaattgtgtgagatgttaggttgaaaggattgag 41264996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 356 - 569
Target Start/End: Complemental strand, 30907455 - 30907235
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaa-tttgataga 454  Q
    |||||||||||| ||||||  || ||||||||||| | ||||   |||||||||||||||||||| |||||| |||||||||||| |||| ||||| |||    
T  30907455 aaggccaaataccacttttaatccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaaga 30907356  T
Q  455 attctcaagttagtccttt---------aagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttct 545  Q
    |||||||||||||||||||         ||||||||||||||||||||    ||||||| |||||| |||||| ||||||||| ||||||||||||| ||    
T  30907355 attctcaagttagtcctttaagtttcaaaagtttcaaataagtcattt---atgataaattatttcgccgtcaccgtttcaaaagtttcaaatatgtcct 30907259  T
Q  546 tttagtttgaaatttttgaaactt 569  Q
    |||||||||||| |||||||||||    
T  30907258 tttagtttgaaacttttgaaactt 30907235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 436 - 557
Target Start/End: Original strand, 21813209 - 21813330
Alignment:
Q  436 gtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttca 535  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| | ||||||| |||| |    
T  21813209 gtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaaaggtccttttagttgataaactatttcaccgtcaccatttcaaaagtttta 21813308  T
Q  536 aatatgttcttttagtttgaaa 557  Q
    |||| || ||||||||||||||    
T  21813309 aataggtccttttagtttgaaa 21813330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 358 - 567
Target Start/End: Original strand, 39376159 - 39376367
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||| | |||| ||||||||||||| | | |||| ||||||| ||| || ||||||  |||||| ||| ||| |||| ||| ||| |  |||||    
T  39376159 ggccaaataccattttttgtcattttagtttaacataattctcaagttggtccttcaagttttgaaagtttcaactagatccttttagttttacggaatt 39376258  T
Q  458 ctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaa 557  Q
    |  ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||  | |||||||||||| |    
T  39376259 cctaagttagtc-tttaaatttcaaataagtctttttagttgataaactatttcaccatcattgtttcaaaagtttcaaatagatccttttagtttgaga 39376357  T
Q  558 tttttgaaac 567  Q
     |||||||||    
T  39376358 cttttgaaac 39376367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 512
Target Start/End: Original strand, 27893023 - 27893174
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| || ||||||| ||||||||||| |||||| |||||||| || ||||| |||| |||||| ||||||  || | ||| ||||| || |||| |    
T  27893023 caaataccacgtttggtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattccc 27893122  T
Q  461 aagttagtcctttaagtttcaaataagtcattttagttgataaactatttca 512  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  27893123 aagttagtcctttaagtttcaaataggtctttttagttgataaactatttca 27893174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 783 - 866
Target Start/End: Complemental strand, 41264902 - 41264819
Alignment:
Q  783 aagatcaayttagtttaaatacctaaaaatcatgttacttcaaaaataaaagtagaaaaagttaccaatacctccgacacgtcc 866  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41264902 aagatccatttagtttaaatatctaaaaatcatgttacttcaaaaataaaagtagaaaaagttgccaatacctccgacacgtcc 41264819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 371 - 483
Target Start/End: Original strand, 30907073 - 30907184
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||||||| ||||||||||| |||||| ||||||||||| |||||||||| |||||| |||||||||||| ||| ||||| | |||||||||||||||||    
T  30907073 ttttggtc-ttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattctcaagttagtcc 30907171  T
Q  471 tttaagtttcaaa 483  Q
    |||||||||||||    
T  30907172 tttaagtttcaaa 30907184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 371 - 483
Target Start/End: Original strand, 31263923 - 31264035
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||||||| ||||||||||| ||||||  ||||||| || |||||||||| |||||| |||||||||||| ||| ||||| |||||||||||||||||||    
T  31263923 ttttggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcc 31264022  T
Q  471 tttaagtttcaaa 483  Q
    |||||||||||||    
T  31264023 tttaagtttcaaa 31264035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 356 - 539
Target Start/End: Original strand, 34336018 - 34336210
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    |||| ||||||| ||||||| || ||||||||||||| |||| |||| |||||| |||||||||  |||||| |||||| ||| | ||| ||||| ||||    
T  34336018 aaggtcaaataccacttttgatccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtttgacagaa 34336117  T
Q  456 ttctcaagttagtcctttaagtttc---------aaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaata 539  Q
    ||| |||||||||||||||||||||         ||||| ||| |||||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  34336118 ttcccaagttagtcctttaagtttcaaaagttttaaataggtctttttagttaataaactatttcaccatcaccgtttcaaaagtttcaaata 34336210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 360 - 483
Target Start/End: Complemental strand, 27893697 - 27893574
Alignment:
Q  360 ccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattct 459  Q
    |||||||  |||||||||| ||||||||||| | |||| ||||||||||| ||||||||||  ||||| ||||||||| || ||| ||||| |||||||     
T  27893697 ccaaatatcacttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattcc 27893598  T
Q  460 caagttagtcctttaagtttcaaa 483  Q
    ||||||||||||||||||||||||    
T  27893597 caagttagtcctttaagtttcaaa 27893574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 369 - 557
Target Start/End: Complemental strand, 31264288 - 31264089
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagtta--gtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagtta 466  Q
    ||||||| || ||||||||||| ||||||  |||||||  ||  |||||||||| |||||| |||||| ||||| ||| ||||| ||||||  |||||||    
T  31264288 acttttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtttgacagaatttccaagtta 31264189  T
Q  467 gtcctttaagtttcaaa---------taagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaa 557  Q
    ||  |||||||||||||         || ||| |||||||||||||||||||||||||||| | ||||||| |||||||||| || ||||||||||||||    
T  31264188 gttatttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgtcaccctttcaaaagtttcaaataggtccttttagtttgaaa 31264089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 373 - 483
Target Start/End: Original strand, 34429681 - 34429791
Alignment:
Q  373 ttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctt 472  Q
    |||||| ||||||||||| |||||| ||||||||||| ||||| |||| ||| || |||||||||||| ||||||||| ||||||  ||||||| |||||    
T  34429681 ttggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatttccaagttaatcctt 34429780  T
Q  473 taagtttcaaa 483  Q
    |||||||||||    
T  34429781 taagtttcaaa 34429791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 375 - 513
Target Start/End: Complemental strand, 39301945 - 39301807
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| |||||||||||||||||| | ||||||||| ||||| ||| |||||||  |||||  || | ||| ||||| |||||| | |||||| | |||||    
T  39301945 ggtccttttagtttgatagaatttttaagttagtcctttaaattttaaaagttttaattaaatctttttagtttgacagaatttttaagttatttcttta 39301846  T
Q  475 agtttcaaataagtcattttagttgataaactatttcac 513  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  39301845 agtttcaaataggccattttagttgataaactatttcac 39301807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 483
Target Start/End: Original strand, 31263987 - 31264095
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| ||||||||||| |||||| ||||||||||| ||||||||||||||||| ||| ||||| || ||  ||||| ||||||| ||||||||| |||||    
T  31263987 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttttctttgacagaattcccaagttagtacttta 31264086  T
Q  475 agtttcaaa 483  Q
    |||||||||    
T  31264087 agtttcaaa 31264095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 369 - 483
Target Start/End: Complemental strand, 16781177 - 16781062
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcattt-aagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttag 467  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||| ||||||  ||||||  ||||||||||| ||| ||||| | ||||| ||||||||    
T  16781177 acttttggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttgacaaaattcacaagttag 16781078  T
Q  468 tcctttaagtttcaaa 483  Q
    |||||||| |||||||    
T  16781077 tcctttaaatttcaaa 16781062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 369 - 516
Target Start/End: Complemental strand, 36196629 - 36196475
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||||||| ||||||||||  | |||| |||| |||||| |||||||||| |||||| |||||||||| | ||| ||||| ||||||  |||||||||    
T  36196629 acttttggtccttttagtttg--acaattttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaatttccaagttagt 36196532  T
Q  469 ccttt---------aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    | |||         |||||||||||| ||||||||||||||||||||||||||||||    
T  36196531 catttgagtttcaaaagtttcaaataggtcattttagttgataaactatttcaccgt 36196475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 404 - 516
Target Start/End: Complemental strand, 20536046 - 20535934
Alignment:
Q  404 ttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataa 503  Q
    |||||| |||||||| | ||||||  |||||  || | ||| ||||| | |||||||||||||||| ||||||||||||||||||| | |||||||||||    
T  20536046 ttagtcctttaagttacgaaagttttaattatatcattttagtttgacataattctcaagttagtcttttaagtttcaaataagtcttgttagttgataa 20535947  T
Q  504 actatttcaccgt 516  Q
    |||||||||||||    
T  20535946 actatttcaccgt 20535934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 483
Target Start/End: Complemental strand, 34336418 - 34336287
Alignment:
Q  352 atttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgat 451  Q
    |||| ||| ||||||  |||||||||| ||||||||||| |||||| |||| |||||| ||||| |||| |||||| || ||| ||||| |||||||||     
T  34336418 attttaggtcaaatatcacttttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttgac 34336319  T
Q  452 agaattctcaagttagtcctttaagtttcaaa 483  Q
    | ||||||||| ||||| |||||| |||||||    
T  34336318 aaaattctcaaattagttctttaaatttcaaa 34336287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 483
Target Start/End: Original strand, 30907136 - 30907244
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| ||||||||||| | |||| ||||||||||| ||||||||||||||||| ||| ||| |||| |||  |||| | ||||| |||||||||| ||||    
T  30907136 ggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagattgacataattcccaagttagtcattta 30907235  T
Q  475 agtttcaaa 483  Q
    |||||||||    
T  30907236 agtttcaaa 30907244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 372 - 483
Target Start/End: Complemental strand, 11871875 - 11871764
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||| ||||||||||| ||||||  ||||  ||||  ||||||||  ||| || |||||| ||||||||| ||||| ||||||||| ||||||||||    
T  11871875 tttggtccttttagtttgacagaatttccaagccagtccgttaagttttgaaactttcaattatgtcctcttagtttgacagaattctcgagttagtcct 11871776  T
Q  472 ttaagtttcaaa 483  Q
    ||||||||||||    
T  11871775 ttaagtttcaaa 11871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 357 - 476
Target Start/End: Complemental strand, 37543219 - 37543100
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| | |||||||  ||||||||||| |||||| ||||||||||| |||||||||  |||||| |||||| ||||| ||| ||||| | |||    
T  37543219 aggccaaataccatttttggttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttgacataat 37543120  T
Q  457 tctcaagttagtcctttaag 476  Q
    |  |||| ||||||||||||    
T  37543119 ttccaaggtagtcctttaag 37543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 424
Target Start/End: Original strand, 21813191 - 21813257
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaa 424  Q
    |||||||||| |||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  21813191 ggccaaataccacttttagtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaa 21813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 381 - 498
Target Start/End: Original strand, 37542956 - 37543072
Alignment:
Q  381 tttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttc 480  Q
    |||||||||| |||| | ||||||||||| |||||||||| ||||||  ||||| ||| | ||| ||||| | ||||  |||||||||||||||||||||    
T  37542956 tttagtttgacagaact-tcaagttagtcttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcctttaagtttc 37543054  T
Q  481 aaataagtcattttagtt 498  Q
    ||| | ||||||||||||    
T  37543055 aaacaggtcattttagtt 37543072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 498
Target Start/End: Original strand, 5116895 - 5116970
Alignment:
Q  423 aagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagtt 498  Q
    ||||| |||||||||||| ||| ||||| | |||| | || |||||||||||||||||||||||||||||||||||    
T  5116895 aagtttcaattaggtccttttagtttgacaaaatttttaaattagtcctttaagtttcaaataagtcattttagtt 5116970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 375 - 440
Target Start/End: Original strand, 19080691 - 19080756
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||  ||||||||    
T  19080691 ggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtcct 19080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 361 - 516
Target Start/End: Original strand, 19080617 - 19080781
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| | ||||||||||||||||| || ||||||    | ||| || |||||||||  |||||| |||||||||| | ||| ||||| |||||| ||    
T  19080617 caaataccatttttggtcattttagttcgacagaattccttaattaatcctttaagttttgaaagtttcaattaggtcattttagtttgacagaattttc 19080716  T
Q  461 aagttagtcctttaagtttcaa---------ataagtcattttagttgataaactatttcaccgt 516  Q
    ||||||| | ||||||||||||         ||| ||| ||||||||||||||||||||||||||    
T  19080717 aagttagacatttaagtttcaaaagtttcatataggtccttttagttgataaactatttcaccgt 19080781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 483
Target Start/End: Original strand, 8260384 - 8260495
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    |||| |||||||||||| | |||||| |||| |||||| |||||||||| |||||| ||||||| || | ||| ||||| ||| ||||||| ||| || |    
T  8260384 tttgatcattttagttttacagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactctt 8260483  T
Q  472 ttaagtttcaaa 483  Q
    |||| |||||||    
T  8260484 ttaattttcaaa 8260495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 516
Target Start/End: Original strand, 20535555 - 20535595
Alignment:
Q  476 gtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  20535555 gtttcaaataggtcattttagttgataaactatttcaccgt 20535595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 32341460 - 32341564
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcattt-aagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtt 478  Q
    ||||||||||| |||||| |||| |||||| ||| |||||| |||| || ||| ||||| || ||| ||||| ||||||||||| |||||||| ||| ||    
T  32341460 ttttagtttgaaagaattttcaaattagtccttttaagttttaaaaatttcaaataggttcttttattttgacagaattctcaatttagtcctataaatt 32341559  T
Q  479 tcaaa 483  Q
    |||||    
T  32341560 tcaaa 32341564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 483
Target Start/End: Complemental strand, 39376456 - 39376360
Alignment:
Q  387 ttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    |||| ||||||  |||||||||| ||||||||||||| ||| ||| |||||| | ||||||||| | | |||  |||||||||||||| ||||||||    
T  39376456 ttgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtctttttaatttgacaaatttcctaagttagtcctttatgtttcaaa 39376360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 364 - 419
Target Start/End: Original strand, 41265100 - 41265155
Alignment:
Q  364 atacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagttt 419  Q
    ||||||||||||||||||||||||||| | |||| ||||||||||| ||| |||||    
T  41265100 atacaacttttggtcattttagtttgacataattttcaagttagtctttttagttt 41265155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 19081124 - 19081067
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggt 437  Q
    ||||||||||| |||||| |||| |||||| |||||||||| |||||| |||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggt 19081067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 484
Target Start/End: Original strand, 16780943 - 16780990
Alignment:
Q  437 tcctcttaatttgatagaattctcaagttagtcctttaagtttcaaat 484  Q
    |||| |||||| || |||||| ||||||||||||||||||||||||||    
T  16780943 tccttttaattcgacagaattttcaagttagtcctttaagtttcaaat 16780990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 27893617 - 27893570
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  27893617 ttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtt 27893570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 483
Target Start/End: Complemental strand, 34336330 - 34336227
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||| ||||| | |||| |||| |||||  ||||| ||||||||||| ||| || |||||  || ||||| |||||| |||||||| || |||||||||    
T  34336330 ttttaatttgacaaaattctcaaattagttctttaaatttcaaaagtttcaaataagtccttgtagtttgacagaattttcaagttaatcttttaagttt 34336231  T
Q  480 caaa 483  Q
    ||||    
T  34336230 caaa 34336227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 39376491 - 39376420
Alignment:
Q  412 ttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    ||||||||| ||||||   |||||||| | |||| |||| ||||||  ||||||||||||||||||||||||    
T  39376491 ttaagtttcgaaagttttgattaggtctttttaaattgacagaatttccaagttagtcctttaagtttcaaa 39376420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 151640 - 151717
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaatta 434  Q
    ||||| |||||| ||||||| |||||||||||||| | ||||  | |||| |||||||||||||| |||||| ||||||    
T  151640 aaggcaaaataccacttttgttcattttagtttgacataatt-cctagttggtcatttaagtttcgaaagtttcaatta 151717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 474 - 528
Target Start/End: Complemental strand, 5117092 - 5117038
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaa 528  Q
    |||||| ||||| ||| |||||||||||||| ||||||||| ||| |||||||||    
T  5117092 aagttttaaatatgtctttttagttgataaattatttcaccatcaccgtttcaaa 5117038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 377 - 423
Target Start/End: Complemental strand, 20536013 - 20535967
Alignment:
Q  377 tcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    |||||||||||||| | |||| ||||||||||| |||||||||||||    
T  20536013 tcattttagtttgacataattctcaagttagtcttttaagtttcaaa 20535967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 11871805 - 11871760
Alignment:
Q  382 ttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||| |||||| || |||||||| |||||||||||||||||    
T  11871805 ttagtttgacagaattctcgagttagtcctttaagtttcaaaagtt 11871760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 362 - 423
Target Start/End: Original strand, 16780928 - 16780989
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    |||||| ||||||| || ||||| || || |||||| ||||||||||| |||||||||||||    
T  16780928 aaataccacttttgatccttttaattcgacagaattttcaagttagtcctttaagtttcaaa 16780989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 436
Target Start/End: Complemental strand, 16781110 - 16781049
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattagg 436  Q
    |||| ||||||||||| | ||||  |||||||||| ||||| ||||||||||| ||||||||    
T  16781110 ggtccttttagtttgacaaaattcacaagttagtcctttaaatttcaaaagtttcaattagg 16781049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 358 - 438
Target Start/End: Original strand, 20535487 - 20535568
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcattt-aagtttcaaaagttacaattaggtc 438  Q
    |||||||||| || || | || ||||||||| | | |||||||||||||||||||| |||||||||| ||| ||| ||||||    
T  20535487 ggccaaataccacgttagatccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtc 20535568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 575 - 604
Target Start/End: Original strand, 27893659 - 27893688
Alignment:
Q  575 gaattttgtcaaactaaaaggaccaaaagt 604  Q
    ||||||||||||||||||||||||||||||    
T  27893659 gaattttgtcaaactaaaaggaccaaaagt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 8e-60; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 356 - 557
Target Start/End: Original strand, 16168449 - 16168650
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||| ||||||| |||||||||  |||||| |||||||||| | ||| ||||| ||||    
T  16168449 aaggccaaataccacttttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtttgacagaa 16168548  T
Q  456 ttctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttga 555  Q
    ||  |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||| |||||||||| || ||||||||||||    
T  16168549 tttccaagttagtcctttaagtttcaaataggtccttttagttgataaactatttcaccctcaccgtttcaaaagtttcaaataggtccttttagtttga 16168648  T
Q  556 aa 557  Q
    ||    
T  16168649 aa 16168650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 369 - 512
Target Start/End: Original strand, 2839622 - 2839765
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||||||| ||||| ||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  2839622 acttttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagt 2839721  T
Q  469 cctttaagtttcaaataagtcattttagttgataaactatttca 512  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||    
T  2839722 cctttaaatttcaaataggtttttttagttgataaactatttca 2839765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 358 - 569
Target Start/End: Original strand, 20575398 - 20575619
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||| ||| |||||| ||||||||||||||||||  |||||||||| |||||||||| ||||||  || |||||||| ||| ||||||||||||    
T  20575398 ggccaaataccactattggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtttgatagaatt 20575497  T
Q  458 ctcaagttagtccttt---------aagtttcaaataagtcattttagttgataaacta-tttcaccgtcatcgtttcaaatgtttcaaatatgttcttt 547  Q
      ||||||||||||||         |||||||||||| ||||||| ||||||||||||| ||||||||||| | ||||||| |||||||||| || ||||    
T  20575498 tccaagttagtcctttaagttttaaaagtttcaaataggtcatttcagttgataaactattttcaccgtcaccatttcaaaagtttcaaataggtccttt 20575597  T
Q  548 tagtttgaaatttttgaaactt 569  Q
    || ||||||| |||||||||||    
T  20575598 taatttgaaacttttgaaactt 20575619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 362 - 516
Target Start/End: Original strand, 11527526 - 11527680
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| |||||||||| ||||| ||||| | ||||   ||||||||| |||||||||| |||||| |||||||||||| ||| ||||| | ||||| ||    
T  11527526 aaataccacttttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcaca 11527625  T
Q  462 agttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11527626 agttagtcctttaagtttcaaataggtcattttagttgataaactatttcaccgt 11527680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 2840195 - 2840032
Alignment:
Q  353 tttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgata 452  Q
    |||||||| |||||  || ||||||| ||||||||| | | |||| ||||||||||||||||||||||||||||| | | ||| |||| ||| ||| | |    
T  2840195 tttaaggctaaatatcacgtttggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtttaaca 2840096  T
Q  453 gaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||    
T  2840095 gaattctcaagttaatcatttaagtttcaaataggtcattttagttgataaactatttcaccgt 2840032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 357 - 569
Target Start/End: Complemental strand, 32417852 - 32417631
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| ||||||| || ||||||||| | ||||||  |||||||||  ||||| |||| |||||| |||||||||||| | | ||||| | |||    
T  32417852 aggccaaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaat 32417753  T
Q  457 tctcaagttagtcctttaagtttca---------aataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttt 547  Q
    |   ||||||||| |||||||||||         |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  |||    
T  32417752 ttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaactatttcaccgtcatcgtttcaaaagtttcaaatatgtcattt 32417653  T
Q  548 tagtttgaaatttttgaaactt 569  Q
    |||||| ||| |||||||||||    
T  32417652 tagtttaaaaattttgaaactt 32417631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 357 - 569
Target Start/End: Complemental strand, 32423693 - 32423472
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| ||||||| || ||||||||| | ||||||  |||||||||  ||||| |||| |||||| |||||||||||| | | ||||| | |||    
T  32423693 aggccaaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaat 32423594  T
Q  457 tctcaagttagtcctttaagtttca---------aataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttt 547  Q
    |   ||||||||| |||||||||||         |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  |||    
T  32423593 ttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagttgataaactatttcaccgtcatcgtttcaaaagtttcaaatatgtcattt 32423494  T
Q  548 tagtttgaaatttttgaaactt 569  Q
    |||||| ||| |||||||||||    
T  32423493 tagtttaaaaattttgaaactt 32423472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 361 - 483
Target Start/End: Complemental strand, 16168826 - 16168704
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| ||||||| || ||||||||||| ||||||  ||| |||||||||||||||||  ||||| |||||||||||| ||| ||||| |||||||||    
T  16168826 caaataccacttttgatctttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctc 16168727  T
Q  461 aagttagtcctttaagtttcaaa 483  Q
    |||||||||  ||| ||||||||    
T  16168726 aagttagtctattacgtttcaaa 16168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 359 - 514
Target Start/End: Complemental strand, 28630754 - 28630599
Alignment:
Q  359 gccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattc 458  Q
    |||| |||| |||||||||| ||||||||||| | ||||   ||||||||  |||||||||  |||||| |||||||  ||  ||| |||| ||||||||    
T  28630754 gccatataccacttttggtccttttagtttgacataattcctaagttagttttttaagttttgaaagtttcaattagacccatttagtttggtagaattc 28630655  T
Q  459 tcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcacc 514  Q
      |||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||    
T  28630654 ctaagttagtactttaagcttcaaataggtccttttagttgataaactatttcacc 28630599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 376 - 483
Target Start/End: Original strand, 32417533 - 32417640
Alignment:
Q  376 gtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaa 475  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||||||||  || || ||||| ||| ||||| ||||||  ||| ||||||||||||    
T  32417533 gtcattttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaa 32417632  T
Q  476 gtttcaaa 483  Q
    ||||||||    
T  32417633 gtttcaaa 32417640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 376 - 483
Target Start/End: Original strand, 32423374 - 32423481
Alignment:
Q  376 gtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaa 475  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||||||||  || || ||||| ||| ||||| ||||||  ||| ||||||||||||    
T  32423374 gtcattttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaa 32423473  T
Q  476 gtttcaaa 483  Q
    ||||||||    
T  32423474 gtttcaaa 32423481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 357 - 516
Target Start/End: Complemental strand, 17180278 - 17180110
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| | |||||||| ||||||||| ||| |||| | || ||| || |||||||||| ||||||  ||||| ||||| ||| ||||| | |||    
T  17180278 aggccaaataccatttttggtccttttagttttatataatttttaaattaatcctttaagtttcgaaagttttaattatgtccttttagtttgacataat 17180179  T
Q  457 tctcaagttagtcctttaa---------gtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    | |||||||||||||||||         ||||||||||  |||||||||||||||||||||||||||||    
T  17180178 tttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagttgataaactatttcaccgt 17180110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 371 - 483
Target Start/End: Original strand, 32417468 - 32417580
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||||||| ||||||||||| |||||| ||||||||||| |||||||||| ||||||  ||||| ||| | ||| ||||| | |||| |||||||||||     
T  32417468 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtca 32417567  T
Q  471 tttaagtttcaaa 483  Q
    |||||||||||||    
T  32417568 tttaagtttcaaa 32417580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 371 - 483
Target Start/End: Original strand, 32423309 - 32423421
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||||||| ||||||||||| |||||| ||||||||||| |||||||||| ||||||  ||||| ||| | ||| ||||| | |||| |||||||||||     
T  32423309 ttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtca 32423408  T
Q  471 tttaagtttcaaa 483  Q
    |||||||||||||    
T  32423409 tttaagtttcaaa 32423421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 372 - 516
Target Start/End: Complemental strand, 10862712 - 10862558
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||| ||||||||||| |||||| ||||||||||| |||||||||  |||||| |||||| ||| | ||| ||||| ||||||| | |||||||| |    
T  10862712 tttggtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccagttagtcat 10862613  T
Q  472 tt----------aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||          |||||||||||| ||| ||||||||||||||||||||||||||    
T  10862612 tttaaatttcaaaagtttcaaataggtccttttagttgataaactatttcaccgt 10862558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 371 - 485
Target Start/End: Complemental strand, 9902390 - 9902276
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||||||  ||||||||||| |||||| ||||||||||| |||||||||| ||||||  ||||| ||||| ||| ||||| | ||||| | ||||||| |    
T  9902390 ttttggttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataattcccgagttagttc 9902291  T
Q  471 tttaagtttcaaata 485  Q
    |||||||||||||||    
T  9902290 tttaagtttcaaata 9902276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 401 - 516
Target Start/End: Complemental strand, 9946800 - 9946685
Alignment:
Q  401 aagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttga 500  Q
    ||||||||| ||||| | || |||||| |||||||||| | ||| ||||| | ||||  ||| |||||||||||| ||||||| | ||| ||||||||||    
T  9946800 aagttagtcctttaaatctcgaaagtttcaattaggtcattttagtttgacataatttccaaattagtcctttaaatttcaaagaggtccttttagttga 9946701  T
Q  501 taaactatttcaccgt 516  Q
    ||||||||||||||||    
T  9946700 taaactatttcaccgt 9946685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 356 - 498
Target Start/End: Complemental strand, 20575785 - 20575646
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    |||||||||||| | |||||||| ||||||||||| |||||| ||||||||||  |||||||||| ||||||  || || ||||| ||| ||||| | ||    
T  20575785 aaggccaaataccatttttggtc-ttttagtttgacagaattctcaagttagt-ttttaagtttcgaaagttttaaataagtccttttagtttgacaaaa 20575688  T
Q  456 ttctcaagttagtcctttaagtttcaaataagtcattttagtt 498  Q
    ||| ||||||||| ||| |||||||||||| ||| ||||||||    
T  20575687 ttcccaagttagt-cttcaagtttcaaataggtccttttagtt 20575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 357 - 513
Target Start/End: Complemental strand, 11528184 - 11528019
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||||||||||||| ||||||| ||| |||||||  ||||| ||||||||||| ||||||||| ||||||| ||| ||  | || ||| ||||| | ||     
T  11528184 aggccaaatacaacgtttggtcctttaagtttgaccgaattttcaagttagtcctttaagtttaaaaagtttcaaatatattcttttagtttgacataag 11528085  T
Q  457 tctcaagttagtccttt---------aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    || ||| ||| ||||||         |||||||||||| |||||||||||||||||||||||||||    
T  11528084 tcccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcac 11528019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 375 - 483
Target Start/End: Complemental strand, 16168752 - 16168644
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| ||||||||||| |||||| |||||||||||  ||| |||||||||||| ||| |||||| | ||| |||||  ||| || |||||||||| ||||    
T  16168752 ggtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtttgactgaaatcccaagttagtctttta 16168653  T
Q  475 agtttcaaa 483  Q
    |||||||||    
T  16168652 agtttcaaa 16168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 483
Target Start/End: Complemental strand, 24139600 - 24139521
Alignment:
Q  404 ttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    |||||| |||||||||| ||||||  ||||| ||||| ||| |||||||||||| ||| |||||||||||||||||||||    
T  24139600 ttagtcctttaagtttcgaaagttttaattaagtccttttagtttgatagaattatcaggttagtcctttaagtttcaaa 24139521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 17179632 - 17179735
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||| ||||| ||||||  |||| ||| | |||||||||| ||| ||  ||||||||||  ||| |||||||||||| ||||||||||||||||| |||    
T  17179632 ttttattttgacagaattcacaaggtagccttttaagtttcgaaaattttaattaggtccctttagtttgatagaattttcaagttagtcctttaaattt 17179731  T
Q  480 caaa 483  Q
    ||||    
T  17179732 caaa 17179735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 20575670 - 20575610
Alignment:
Q  423 aagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    ||||| ||| |||||||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaa 20575610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 24139564 - 24139520
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaa 424  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||    
T  24139564 ttttagtttgatagaattatcaggttagtcctttaagtttcaaaa 24139520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 474 - 513
Target Start/End: Complemental strand, 10407755 - 10407716
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  10407755 aagtttcaaatatgtcattttagttgataaactatttcac 10407716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 381 - 440
Target Start/End: Original strand, 17179693 - 17179752
Alignment:
Q  381 tttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||| || ||| ||||||||    
T  17179693 tttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtcct 17179752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 516
Target Start/End: Original strand, 10962849 - 10962891
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  10962849 aagtttcaaatatgtcattttagttgataaactattttaccgt 10962891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 461 - 514
Target Start/End: Original strand, 24139087 - 24139140
Alignment:
Q  461 aagttagtcctttaagtttcaaataagtcattttagttgataaactatttcacc 514  Q
    |||||| || ||||||||||||| | |||||||||||||||||| |||||||||    
T  24139087 aagttaatcatttaagtttcaaaaatgtcattttagttgataaattatttcacc 24139140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 17131546 - 17131598
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtc 409  Q
    ||||||||||  |||||||||| ||||| |||||||||||| |||||||||||    
T  17131546 aggccaaatatcacttttggtccttttaatttgatagaattttcaagttagtc 17131598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 20575658 - 20575606
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||| ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  20575658 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtt 20575606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 513
Target Start/End: Original strand, 10407360 - 10407399
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  10407360 aagtttcaaatatgtcattttagttgataaattatttcac 10407399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 474 - 512
Target Start/End: Original strand, 9902010 - 9902048
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttca 512  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  9902010 aagttttaaataggtcattttagttgataaactatttca 9902048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 445 - 483
Target Start/End: Complemental strand, 17132266 - 17132228
Alignment:
Q  445 atttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  17132266 atttgacagaattctcaagttaatcctttaagtttcaaa 17132228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 2e-54; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 357 - 569
Target Start/End: Original strand, 31893235 - 31893447
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| | |||||||  ||||||||||| |||||| ||||||||||  |||||||||| |||||| |||||||||| | ||| ||||| |||||    
T  31893235 aggccaaataccatttttggttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaat 31893334  T
Q  457 tctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaa 556  Q
    ||  ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||| |||||||||| || |||||||||| ||    
T  31893335 tcctaagttagtcttttaagtttcaaataggtcattttagtcgataaactatttcacagtcaccgtttcaaaagtttcaaataggtccttttagtttcaa 31893434  T
Q  557 atttttgaaactt 569  Q
    | |||||||||||    
T  31893435 aattttgaaactt 31893447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 355 - 516
Target Start/End: Complemental strand, 5559758 - 5559599
Alignment:
Q  355 taaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgataga 454  Q
    ||||||||||||| |||||||||| ||||||||||| | ||||  |||||||||| ||||||||| ||| ||| |||||||||||| ||| ||||| |||    
T  5559758 taaggccaaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagttttaaa-gtttcaattaggtccttttagtttgacaga 5559660  T
Q  455 attctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  5559659 attcccaagttagtcctttaagtttcaaataagtctttttagttgat-aactatttcaccgt 5559599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 369 - 513
Target Start/End: Complemental strand, 1441560 - 1441416
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||||||| ||||||||||| | ||||  |||||||||| |||| ||||| |||||| |||||||||| | ||| ||||||||||||| |||||||||    
T  1441560 acttttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaattcccaagttagt 1441461  T
Q  469 cctttaagtttcaaataagtcattttagttgataaactatttcac 513  Q
    | ||||||||||||||| ||| |||||||||||||||||||||||    
T  1441460 cttttaagtttcaaataggtccttttagttgataaactatttcac 1441416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 371 - 498
Target Start/End: Complemental strand, 31893601 - 31893474
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||||||| ||||||||||| ||||||   ||||||||| ||||||||| ||||||| |||||||||||| ||| ||||| |||||||||||||||||||    
T  31893601 ttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcc 31893502  T
Q  471 tttaagtttcaaataagtcattttagtt 498  Q
    ||||||||||||||||||| ||||||||    
T  31893501 tttaagtttcaaataagtccttttagtt 31893474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 446 - 566
Target Start/End: Complemental strand, 36566563 - 36566443
Alignment:
Q  446 tttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttct 545  Q
    ||||| ||||||  |||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||| |||||||||| || ||    
T  36566563 tttgacagaatttccaagttagtcttttaagtttcaaatatgtctttttagttgataaactatttcaccgtcaccttttcaaaagtttcaaataggtcct 36566464  T
Q  546 tttagtttgaaatttttgaaa 566  Q
    |||||||||||| ||||||||    
T  36566463 tttagtttgaaacttttgaaa 36566443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 357 - 483
Target Start/End: Original strand, 5805023 - 5805149
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||| |||||| ||||| |||| ||||||||||| |||||| ||||||||||| |||||||||| |||||| |||||||||||| ||| ||||| |||||    
T  5805023 aggctaaataccactttcggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaat 5805122  T
Q  457 tctcaagttagtcctttaagtttcaaa 483  Q
    ||||||| || ||||||||||||||||    
T  5805123 tctcaagctattcctttaagtttcaaa 5805149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 362 - 557
Target Start/End: Original strand, 34951218 - 34951421
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| ||||||| || ||||||||||| |  |||  |||  ||||| |||||||||| |||||| |||||||||||| ||  ||||| | |||||| |    
T  34951218 aaataccacttttgatctttttagtttgacaatattcccaacatagtc-tttaagtttcgaaagtttcaattaggtccttttcgtttgacataattctta 34951316  T
Q  462 agttagtcctttaagt---------ttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtt 552  Q
    ||||||||||||||||         |||||||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||| ||| ||||||||    
T  34951317 agttagtcctttaagtttcaaaagtttcaaataagtcattttagttgataaactatttcactgtcactgtttcaaaagtttcaaataggtttttttagtt 34951416  T
Q  553 tgaaa 557  Q
    |||||    
T  34951417 tgaaa 34951421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 483
Target Start/End: Complemental strand, 33879651 - 33879529
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| | |||||||| ||||||||||| ||||||  |||||||||| |||||||||| |||||| |||||||||||| ||||||||| ||||||  |    
T  33879651 caaataccatttttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttcc 33879552  T
Q  461 aagttagtcctttaagtttcaaa 483  Q
    |||||| ||||||||||||||||    
T  33879551 aagttaatcctttaagtttcaaa 33879529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 353 - 513
Target Start/End: Original strand, 27995042 - 27995211
Alignment:
Q  353 tttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgata 452  Q
    ||||||||||||||  || ||||||| ||||||||||| |||||| ||||||||||  |||||||||||||| ||  || ||| || | ||||||||| |    
T  27995042 tttaaggccaaatatcacgtttggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgaca 27995141  T
Q  453 gaattctcaagttagtcctttaagtt---------tcaaataagtcattttagttgataaactatttcac 513  Q
    |||||||||||||| |||||||||||         |||||||||| ||||||||||||||||||||||||    
T  27995142 gaattctcaagttaatcctttaagtttcaaaagtatcaaataagtaattttagttgataaactatttcac 27995211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 362 - 515
Target Start/End: Complemental strand, 28257071 - 28256918
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| |||||| ||| ||||||||||||| |||| | ||||||||  |||||||||  ||| || |||||||||| | ||| ||||| | |||| |||    
T  28257071 aaataccactttttgtccttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtttgacaaaattttca 28256972  T
Q  462 agttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccg 515  Q
    |||||||||||||||||| ||||| || ||||||||||||||| ||||||||||    
T  28256971 agttagtcctttaagttttaaatatgttattttagttgataaattatttcaccg 28256918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 371 - 514
Target Start/End: Original strand, 39958686 - 39958829
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||||||| ||||||||||| | |||| | ||||||||||||||||| || |||||| |||||| ||| | ||| ||||| ||||||| ||   || |||    
T  39958686 ttttggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtttgacagaattcccattctaatcc 39958785  T
Q  471 tttaagtttcaaataagtcattttagttgataaactatttcacc 514  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  39958786 tttaagtttcaaataggtccttttagttgataaactatttcacc 39958829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 369 - 483
Target Start/End: Original strand, 1286367 - 1286481
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||| ||| |||||||||||||||||| |||| |||||  ||||| ||||||||||| |||||||||||| ||| ||||| |||||||| ||||||||    
T  1286367 acttttcgtccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagt 1286466  T
Q  469 cctttaagtttcaaa 483  Q
    | |||||||||||||    
T  1286467 cttttaagtttcaaa 1286481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 430 - 569
Target Start/End: Complemental strand, 4187756 - 4187608
Alignment:
Q  430 aattaggtcctcttaatttgatagaattctcaagttagtcctttaa---------gtttcaaataagtcattttagttgataaactatttcaccgtcatc 520  Q
    |||||| |||| ||||||||| |||||| |||||||||||||||||         |||| ||||| |||||||||||||||||||||||||||| ||| |    
T  4187756 aattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagttgataaactatttcaccttcacc 4187657  T
Q  521 gtttcaaatgtttcaaatatgttcttttagtttgaaatttttgaaactt 569  Q
     ||||||| |||||||||| ||  ||||||||||||| |||||||||||    
T  4187656 atttcaaaagtttcaaataagtcattttagtttgaaacttttgaaactt 4187608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 357 - 516
Target Start/End: Original strand, 5559092 - 5559262
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcattt-aagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    ||||||||||| || ||||||| ||||| ||||| ||||||  |||||||||| ||| |||||||||||||| ||| ||| |||| ||| ||||||| ||    
T  5559092 aggccaaataccacgtttggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaa 5559191  T
Q  456 ttctcaagttagtccttt----------aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||| ||||||||||||||          |||||||||||| ||| ||||||||||||||||||||||||||    
T  5559192 ttcccaagttagtccttttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgt 5559262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 371 - 516
Target Start/End: Original strand, 35214805 - 35214960
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagt-catttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtc 469  Q
    ||||| || ||||||||||| ||||||   |||||||| | ||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||    
T  35214805 ttttgatccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtc 35214904  T
Q  470 ctttaag---------tttcaaataagtcattttagttgataaactatttcaccgt 516  Q
     ||||||         ||||||||| ||| ||||||||||||||||||||||||||    
T  35214905 ttttaagtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgt 35214960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 372 - 516
Target Start/End: Complemental strand, 8040270 - 8040127
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||| ||||||||| |  |||||  ||| |||||| |||||||||||||| || ||| ||| |||| |||  |||| ||||| | ||||||||||||    
T  8040270 tttggtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttagcttgacagaatcc-caagttagtcct 8040172  T
Q  472 ttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||    
T  8040171 ttaagtttcaaataggtccttttagttgatgaactatttcaccgt 8040127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 362 - 553
Target Start/End: Complemental strand, 19925472 - 19925272
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| |||||||||  ||||||||||| | ||||  ||| |||||| |||||||| | ||||||  |||||| |||| ||| ||||| ||||||| ||    
T  19925472 aaataccacttttggttcttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattccca 19925373  T
Q  462 agttagtcctttaagttt---------caaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtt 552  Q
    ||||||||||||||||||         |||||| ||| ||| |||||||||||||||||||| |||  |||||||| |||||||||| ||  ||||||||    
T  19925372 agttagtcctttaagtttcaaaagtttcaaataggtcctttcagttgataaactatttcaccatcactgtttcaaaagtttcaaataggtctttttagtt 19925273  T
Q  553 t 553  Q
    |    
T  19925272 t 19925272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 369 - 512
Target Start/End: Original strand, 33235031 - 33235183
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    ||||||| |||||||||||||| |||||| |||||||| || ||||| ||| ||||||| |||||||||||| ||  ||||| ||||||| ||||||||     
T  33235031 acttttgttcattttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaattcccaagttaga 33235130  T
Q  469 ccttt---------aagtttcaaataagtcattttagttgataaactatttca 512  Q
    |||||         |||||||||| | ||||||||||||||||||||||||||    
T  33235131 cctttaaatttcaaaagtttcaaagaggtcattttagttgataaactatttca 33235183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 352 - 483
Target Start/End: Complemental strand, 34951606 - 34951475
Alignment:
Q  352 atttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgat 451  Q
    |||| ||| ||||||| | |||||||| ||||||||||| |||||||||||||||||| |||||||||| |||||| ||||||| |||| ||| |||||     
T  34951606 attttagggcaaatactatttttggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgac 34951507  T
Q  452 agaattctcaagttagtcctttaagtttcaaa 483  Q
    | ||||   || | ||||||||||||||||||    
T  34951506 acaatttctaaatcagtcctttaagtttcaaa 34951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 361 - 483
Target Start/End: Original strand, 36566267 - 36566389
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| || ||||||| ||||||||||| |||||| | |||||||||||||||||||  |||||| |||||||||| | ||| ||||| |||||||||    
T  36566267 caaataccacgtttggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctc 36566366  T
Q  461 -aagttagtcctttaagtttcaaa 483  Q
     |||||||| ||||||||||||||    
T  36566367 aaagttagt-ctttaagtttcaaa 36566389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 357 - 514
Target Start/End: Original strand, 23150624 - 23150790
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| |  ||||||| ||||||||||| | |||| ||||||||||| ||||| |||  |||||| |||||| ||| | ||||||||| |||||    
T  23150624 aggccaaatactatgtttggtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaat 23150723  T
Q  457 tctcaagttagtccttt---------aagtttcaaataagtcattttagttgataaactatttcacc 514  Q
    |||||  |||||| |||         ||||||||||||| |||||||||||||||||||||||||||    
T  23150724 tctcagattagtcttttaagtttcaaaagtttcaaataaatcattttagttgataaactatttcacc 23150790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 371 - 483
Target Start/End: Original strand, 21412865 - 21412977
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||| ||| ||||||||||| |||||| | |||||| || |||||||||  |||||| ||||||| |||| ||| ||||| |||||| ||||||||||||    
T  21412865 ttttagtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttcaagttagtcc 21412964  T
Q  471 tttaagtttcaaa 483  Q
    |||||||||||||    
T  21412965 tttaagtttcaaa 21412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 21412934 - 21413037
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||  || ||| || | ||| ||| | |||||||||||||||||| |||||||||    
T  21412934 ttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtttcacagaattctcaagttagtcttttaagttt 21413033  T
Q  480 caaa 483  Q
    ||||    
T  21413034 caaa 21413037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 569
Target Start/End: Complemental strand, 21413244 - 21413028
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| | |||||||| |||||||| || ||||||  ||| ||||| |||| |||||| ||| || |||||||| ||| ||||||||| ||||||       
T  21413244 caaatactatttttggtccttttagttcgacagaattcccaaattagttattttagtttcgaaaatttcaattaggcccttttaatttgacagaatttct 21413145  T
Q  461 aagttagtccttta--------agtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtt 552  Q
    ||||||||  || |        ||||||||||| ||| |||||||| |||||||| |||||||||| ||||||||| |||| ||||| || |||||| ||    
T  21413144 aagttagtttttaagtttcaaaagtttcaaataggtccttttagttcataaactacttcaccgtcaccgtttcaaaagttttaaataggtccttttaatt 21413045  T
Q  553 tgaaatttttgaaactt 569  Q
    | ||| |||||||||||    
T  21413044 taaaacttttgaaactt 21413028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 355 - 516
Target Start/End: Original strand, 8039646 - 8039799
Alignment:
Q  355 taaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgataga 454  Q
    ||||| ||||||| |||||| ||| ||||||||||| | |||| ||||||||||  |||||||||| |||||| |||||||||||| ||| ||||| |||    
T  8039646 taaggtcaaataccactttttgtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtttgaaaga 8039745  T
Q  455 attctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||    |||||  ||    |||||||||||| ||| ||||||||||||||||||||||||||    
T  8039746 at----aagtt--tc--aaaagtttcaaataggtccttttagttgataaactatttcaccgt 8039799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 369 - 483
Target Start/End: Original strand, 21433141 - 21433255
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    ||||||| || ||||||||||| | ||||  |||||||||| |||||||||| || ||| |||||| ||||| ||| ||||| ||||||| |||||||||    
T  21433141 acttttgatccttttagtttgacaaaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattcccaagttagt 21433240  T
Q  469 cctttaagtttcaaa 483  Q
    | |||||||||||||    
T  21433241 catttaagtttcaaa 21433255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 358 - 483
Target Start/End: Complemental strand, 5805731 - 5805607
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||| || ||||||| ||||||||||| | |||| | |||||||||||||||||||  |||||| |||||| ||||| ||| |||||  |||||    
T  5805731 ggccaaatactacctttggtccttttagtttgacaaaatttt-aagttagtcatttaagttttgaaagtttcaattatgtccttttagtttgactgaatt 5805633  T
Q  458 ctcaagttagtcctttaagtttcaaa 483  Q
     |||||||| || |||||||||||||    
T  5805632 ttcaagttaatcttttaagtttcaaa 5805607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 479
Target Start/End: Original strand, 40904675 - 40904798
Alignment:
Q  355 taaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgataga 454  Q
    ||||| ||||||| ||||| |||| |||| |||||| | |||| ||||||||||| ||||||||| ||||||| |||||||||||| ||| ||||| | |    
T  40904675 taaggtcaaataccacttt-ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacata 40904773  T
Q  455 attctcaagttagtcctttaagttt 479  Q
    ||| |||| |||||| |||||||||    
T  40904774 attttcaaattagtcatttaagttt 40904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 369 - 511
Target Start/End: Original strand, 1346477 - 1346624
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    ||||||| || ||||||||||| |||||| | ||||||||  |||||||||| |||||| ||||||  |||| ||| ||||| | ||||  |||||||||    
T  1346477 acttttgatccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagt 1346576  T
Q  469 cctttaagtttcaaa-----taagtcattttagttgataaactatttc 511  Q
    |||||||||||||||      ||||  |||||||||||||||||||||    
T  1346577 cctttaagtttcaaaagtttcaagttcttttagttgataaactatttc 1346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 352 - 483
Target Start/End: Original strand, 19925085 - 19925215
Alignment:
Q  352 atttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgat 451  Q
    |||| ||||||||||| | |||||||| ||||||||||| ||||||  ||||||| || || ||||||| |||||| ||||||| |||| ||| |||||     
T  19925085 attttaggccaaatactatttttggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtttgac 19925184  T
Q  452 agaattctcaagttagtcctttaagtttcaaa 483  Q
    | |||| || | ||||||||||||||||||||    
T  19925185 acaatt-tccaattagtcctttaagtttcaaa 19925215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 358 - 516
Target Start/End: Original strand, 20366035 - 20366200
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||  | |||||||| ||||||||| | |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||| ||||| ||||||    
T  20366035 ggccaaatatcatttttggtccttttagttt-acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaatt 20366133  T
Q  458 ctcaagttagtccttta---------agtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||| ||| | ||| |||         ||||||||||| ||| ||||||||||||||||||||||||||    
T  20366134 ctc-agtcaatcccttatatttcaagagtttcaaataggtctttttagttgataaactatttcaccgt 20366200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 347 - 483
Target Start/End: Complemental strand, 29591205 - 29591068
Alignment:
Q  347 taaaaatttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaat 446  Q
    |||||| | |||| ||||||| ||||||| || | ||||||||||| |||||||||||||||| |||||||||||||||||  ||||||||| | ||| |    
T  29591205 taaaaaataaaggtcaaataccacttttg-tcttattagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagt 29591107  T
Q  447 ttgatagaattctcaagt--tagtcctttaagtttcaaa 483  Q
    |||| | ||| | |||||  || ||||||||||||||||    
T  29591106 ttgacaaaatccgcaagttataatcctttaagtttcaaa 29591068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 486 - 557
Target Start/End: Original strand, 33879405 - 33879476
Alignment:
Q  486 agtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaa 557  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||| ||||| || ||||||||||||||    
T  33879405 agtcattttagttgataaactatttcaccgtcactgtttcaaaagttttaaataggtccttttagtttgaaa 33879476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 422 - 516
Target Start/End: Complemental strand, 10620300 - 10620206
Alignment:
Q  422 aaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||| |||||||| ||| ||| ||| | ||||||  ||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  10620300 aaagtttcaattaggcccttttagtttaacagaatttccaagtaagtcctttaagtttcaaataagttattttagttgataaattattccaccgt 10620206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 362 - 479
Target Start/End: Complemental strand, 1286936 - 1286821
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    ||||||||  ||||||| ||||||||| |||||||| | |||| |||||||||| |||||||||||  || ||| |||| | |||||||||||||| |||    
T  1286936 aaatacaaagtttggtccttttagtttcatagaatttttaagtcagtcatttaa-tttcaaaagttttaaatagatcctat-aatttgatagaattttca 1286839  T
Q  462 agttagtcctttaagttt 479  Q
    | ||||||||||||||||    
T  1286838 aattagtcctttaagttt 1286821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 362 - 483
Target Start/End: Complemental strand, 22876987 - 22876867
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| ||||||| || ||||||||||| | ||||  ||||||| |  |||||||||| |||||| |||||| ||| | ||| ||||| ||||||||||    
T  22876987 aaataccacttttgatccttttagtttgacataatttccaagttaatt-tttaagtttcgaaagtttcaattaagtcattttagtttgacagaattctca 22876889  T
Q  462 agttagtcctttaagtttcaaa 483  Q
    ||||| ||||||||||||||||    
T  22876888 agttaatcctttaagtttcaaa 22876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 375 - 483
Target Start/End: Original strand, 36566341 - 36566449
Alignment:
Q  375 ggtcattttagtttgatagaattatcaa-gttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttt 473  Q
    |||||||||||||||| |||||| |||| ||||||| |||||||||||||| || ||| || ||| | ||| ||||| | ||||||||||||||||||||    
T  36566341 ggtcattttagtttgacagaattctcaaagttagtc-tttaagtttcaaaattttcaaataagtcattttagtttgacaaaattctcaagttagtccttt 36566439  T
Q  474 aagtttcaaa 483  Q
    || |||||||    
T  36566440 aaatttcaaa 36566449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 359 - 483
Target Start/End: Complemental strand, 20366675 - 20366551
Alignment:
Q  359 gccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattc 458  Q
    ||||||||| || ||||||| ||||||||  | ||||||  |||||||||| ||||||||||||||||| | |  || |||| ||| ||||| | |||||    
T  20366675 gccaaataccacatttggtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattc 20366576  T
Q  459 tcaagttagtcctttaagtttcaaa 483  Q
     ||||||||||||||| ||||||||    
T  20366575 gcaagttagtcctttaggtttcaaa 20366551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 349 - 512
Target Start/End: Complemental strand, 35215471 - 35215299
Alignment:
Q  349 aaaatttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaattt 448  Q
    |||||| ||||| |||||  || |||| || ||||||||||| | |||| ||||||||||| ||||| |||| ||| || |||||| ||| | |||||||    
T  35215471 aaaattaaaggcgaaatatcacgtttgatccttttagtttgacaaaattttcaagttagtcctttaaatttcgaaaatttcaattaagtcattttaattt 35215372  T
Q  449 gatagaattctcaagttagtccttt---------aagtttcaaataagtcattttagttgataaactatttca 512  Q
    || ||||||  ||| |||||| |||         ||||||||||||| |||||||||||||||||||||||||    
T  35215371 gacagaatttccaaattagtcttttaagttttaaaagtttcaaataactcattttagttgataaactatttca 35215299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 483
Target Start/End: Complemental strand, 39959330 - 39959207
Alignment:
Q  360 ccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattct 459  Q
    |||||||| || ||||||| ||||||||||| |||||| | || |||||||||||| ||| ||||||| ||| ||| | || ||| ||||| ||||||      
T  39959330 ccaaataccacgtttggtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttc 39959231  T
Q  460 caagttagtcctttaagtttcaaa 483  Q
    ||||||| || |||||||||||||    
T  39959230 caagttaatcatttaagtttcaaa 39959207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 375 - 462
Target Start/End: Original strand, 40904754 - 40904841
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaa 462  Q
    |||| ||||||||||| | |||| |||| |||||||||||||||| ||||||| ||| ||| |||| ||||||||| |||||||||||    
T  40904754 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattctcaa 40904841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 360 - 483
Target Start/End: Complemental strand, 31176086 - 31175970
Alignment:
Q  360 ccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattct 459  Q
    |||||||| |||||||||| ||||||||||||| ||       |||| || ||||| |||  |||||| |||||||||||| ||| ||||| ||||||      
T  31176086 ccaaataccacttttggtccttttagtttgatataa-------gttaatcctttaatttttgaaagtttcaattaggtccttttagtttgacagaatttc 31175994  T
Q  460 caagttagtcctttaagtttcaaa 483  Q
    ||||||||||||||||||||||||    
T  31175993 caagttagtcctttaagtttcaaa 31175970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 521 - 569
Target Start/End: Original strand, 21433248 - 21433296
Alignment:
Q  521 gtttcaaatgtttcaaatatgttcttttagtttgaaatttttgaaactt 569  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  21433248 gtttcaaaagtttcaaataagttcttttagtttgaaatttttgaaactt 21433296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 483
Target Start/End: Complemental strand, 31893537 - 31893438
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| ||||||||||| |||||| ||||||||||| |||||||||||||         || ||||| ||| ||||| | |||||||||||||||||||||    
T  31893537 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaa---------taagtccttttagtttgacaaaattctcaagttagtccttta 31893447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 375 - 483
Target Start/End: Complemental strand, 33879577 - 33879470
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| ||||| ||||| ||||||  ||||||| || ||||||||||||||||| ||| |||||||| ||| || || | ||||| ||||||||||| |||    
T  33879577 ggtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagttcgacataattcccaagttagtcc-tta 33879479  T
Q  475 agtttcaaa 483  Q
    |||||||||    
T  33879478 agtttcaaa 33879470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 471
Target Start/End: Original strand, 5075356 - 5075446
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||||||| |||  | ||||||||||| ||||||||| ||||||| |||||  ||||| || |||||| ||||||||||||||||||||    
T  5075356 ttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttcaattgagtcct-tttatttgacagaattctcaagttagtcct 5075446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 28256501 - 28256604
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||||| ||||||  ||||||| |  ||||| |||||||||||  ||  || |||| ||| ||||| |||||||||||||||||||||||| |||    
T  28256501 ttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtttgacagaattctcaagttagtcctttaaattt 28256600  T
Q  480 caaa 483  Q
    ||||    
T  28256601 caaa 28256604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 513
Target Start/End: Original strand, 20183778 - 20183919
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaag--- 476  Q
    ||||||||||| ||||||  ||| | |||  ||||| |||  |||||| ||||||| |||| ||||||| ||||| ||| |||||||||||||||||       
T  20183778 ttttagtttgacagaatttacaattcagttctttaaattttgaaagtttcaattagatcct-ttaatttaatagagttcccaagttagtcctttaagttt 20183876  T
Q  477 ------tttcaaataagtcattttagttgataaactatttcac 513  Q
          |||||||||||||||||||||||||||| ||||||||    
T  20183877 caaaaatttcaaataagtcattttagttgataaattatttcac 20183919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 462 - 516
Target Start/End: Complemental strand, 28104691 - 28104637
Alignment:
Q  462 agttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||||| |||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  28104691 agttattcctttaagttttaaataagtcatttcagttgataaattatttcaccgt 28104637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 354 - 483
Target Start/End: Complemental strand, 6220516 - 6220389
Alignment:
Q  354 ttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatag 453  Q
    ||||||| |||||| | |||| ||| ||||||||||||| |||| |||||||| |  |||||  ||  |||||| |||| |||| || ||| ||| ||||    
T  6220516 ttaaggctaaataccaatttttgtc-ttttagtttgatataattttcaagttaattctttaaaattataaagtttcaataaggtacttttagtttcatag 6220418  T
Q  454 aattctcaagttagtcctttaagtttcaaa 483  Q
    ||||||||||||||| ||||||||||||||    
T  6220417 aattctcaagttagt-ctttaagtttcaaa 6220389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 362 - 479
Target Start/End: Original strand, 20101813 - 20101928
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| | ||||| ||||||||||||||  |||||  |||||||||  |||||||||| |||||| ||||||| |||| ||| || || ||| || |||    
T  20101813 aaataccatttttgatcattttagtttgactgaattcccaagttagtt-tttaagtttcgaaagtttcaattagatccttttagttcgacagattt-tca 20101910  T
Q  462 agttagtcctttaagttt 479  Q
    ||||||||||||||||||    
T  20101911 agttagtcctttaagttt 20101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 10619868 - 10619928
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    ||||||||||| | |||| ||||||||||| ||||||||||||||||| ||| ||||||||    
T  10619868 ttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtcct 10619928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 21433395 - 21433287
Alignment:
Q  376 gtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt-ccttta 474  Q
    ||||||||||||||| ||||||  ||||||| || ||||||||||||||||| ||| || ||  | ||  ||||| ||||||| ||||||||| | ||||    
T  21433395 gtcattttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttagtactttta 21433296  T
Q  475 agtttcaaa 483  Q
    |||||||||    
T  21433295 agtttcaaa 21433287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 424
Target Start/End: Complemental strand, 33235616 - 33235564
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaa 424  Q
    ||||||| ||||||||||| | |||||||||||||||| ||||||||||||||    
T  33235616 tttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaa 33235564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 21433212 - 21433259
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  21433212 ttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtt 21433259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 375 - 437
Target Start/End: Original strand, 1286433 - 1286495
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggt 437  Q
    |||| ||||||||||| |||||| | ||||||||| ||||||||||||||||| ||| |||||    
T  1286433 ggtccttttagtttgagagaattctaaagttagtcttttaagtttcaaaagtttcaaataggt 1286495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 516
Target Start/End: Complemental strand, 1349162 - 1349120
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  1349162 aagtttcaaataggtcattttagttgataaaccatttcaccgt 1349120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 1440991 - 1441061
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||| || |||| || ||||||||||| ||||||  |||||||||  |||||||||||||||||    
T  1440991 aggccaaataccacatttgatccttttagtttgacagaattcccaagttagtattttaagtttcaaaagtt 1441061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 369 - 483
Target Start/End: Original strand, 4187503 - 4187617
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||| |||| |||||||||| ||||||   || ||| || |||||||||  |||||| ||||||||| || ||  ||||| | ||||| |||||||||    
T  4187503 acttttcgtcagtttagtttgacagaattcataaattaatcctttaagtttagaaagtttcaattaggtactttttgtttgacataattcccaagttagt 4187602  T
Q  469 cctttaagtttcaaa 483  Q
     ||||||||||||||    
T  4187603 tctttaagtttcaaa 4187617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 609
Target Start/End: Original strand, 5559711 - 5559749
Alignment:
Q  571 ttgggaattttgtcaaactaaaaggaccaaaagttgtat 609  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  5559711 ttgggaattttgtcaaactaaaaggaccaaaagtggtat 5559749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 516
Target Start/End: Original strand, 10619911 - 10619953
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  10619911 aagtttcaaataggtccttttagttgataaactatttcaccgt 10619953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 377 - 427
Target Start/End: Original strand, 21412991 - 21413041
Alignment:
Q  377 tcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||||||||| | |||||| ||||||||||| |||||||||||||||||    
T  21412991 tcattttagtttcacagaattctcaagttagtcttttaagtttcaaaagtt 21413041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 483
Target Start/End: Complemental strand, 23679660 - 23679544
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| || ||||||| ||||||||||||| ||||  ||| ||||||         ||| ||||| ||||||||| || ||| ||||| |||||    
T  23679660 aggccaaataccacgtttggtctttttagtttgataaaattcacaaattagtc---------tcataagtttcaattaggttcttttagtttgacagaat 23679570  T
Q  457 tctcaagttagtcctttaagtttcaaa 483  Q
    |||||||||||| ||||||||||||||    
T  23679569 tctcaagttagt-ctttaagtttcaaa 23679544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 516
Target Start/End: Complemental strand, 42991058 - 42990989
Alignment:
Q  446 tttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||||| |||||| |||||||| || ||||| ||| ||||| ||| ||||||||||||||||||||||||||    
T  42991058 tttgacagaattttcaagttaatc-tttaaattttaaataggtctttttagttgataaactatttcaccgt 42990989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 437
Target Start/End: Original strand, 28256561 - 28256618
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggt 437  Q
    ||||||||||| |||||| ||||||||||| ||||| ||||||||||| ||| |||||    
T  28256561 ttttagtttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggt 28256618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 375 - 440
Target Start/End: Complemental strand, 31176018 - 31175953
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    |||| ||||||||||| ||||||  |||||||||| ||||||||||||||||| |||  |||||||    
T  31176018 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtcct 31175953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 362 - 423
Target Start/End: Complemental strand, 36566587 - 36566526
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    |||||| ||||||||||  |||||||||| ||||||  |||||||||| |||||||||||||    
T  36566587 aaataccacttttggtccctttagtttgacagaatttccaagttagtcttttaagtttcaaa 36566526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 39959250 - 39959193
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggt 437  Q
    ||||||||||| ||||||  ||||||| |||||||||||||||||||| ||| |||||    
T  39959250 ttttagtttgacagaatttccaagttaatcatttaagtttcaaaagtttcaaataggt 39959193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 10619851 - 10619911
Alignment:
Q  423 aagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    ||||| ||||||||| || ||| ||||| | |||| |||||||||||||||||||||||||    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaa 10619911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 430 - 513
Target Start/End: Complemental strand, 33235618 - 33235526
Alignment:
Q  430 aattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa---------taagtcattttagttgataaactatttcac 513  Q
    |||| |||||| ||| ||||| | |||| |||||||||||||||||||||||||         || |||||||||||||||||||||||||||    
T  33235618 aatttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagttgataaactatttcac 33235526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 6220431 - 6220385
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||||    
T  6220431 ttttagtttcatagaattctcaagttagtc-tttaagtttcaaaagtt 6220385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 23679586 - 23679540
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  23679586 ttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtt 23679540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 423
Target Start/End: Complemental strand, 34951458 - 34951415
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    ||||||||||| | |||| |||||||||||||||||||||||||    
T  34951458 ttttagtttgacacaattctcaagttagtcatttaagtttcaaa 34951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 427
Target Start/End: Original strand, 36566402 - 36566453
Alignment:
Q  376 gtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||||||| | |||| ||||||||||| ||||| |||||||||||    
T  36566402 gtcattttagtttgacaaaattctcaagttagtcctttaaatttcaaaagtt 36566453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 380 - 438
Target Start/End: Complemental strand, 5805650 - 5805592
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtc 438  Q
    |||||||||||  ||||| |||||||| || ||||||||||||||||| ||| ||||||    
T  5805650 ttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtc 5805592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 571 - 609
Target Start/End: Original strand, 19925432 - 19925470
Alignment:
Q  571 ttgggaattttgtcaaactaaaaggaccaaaagttgtat 609  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  19925432 ttgggaattttgtcaaactaaaagaaccaaaagtggtat 19925470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 604
Target Start/End: Original strand, 1441527 - 1441560
Alignment:
Q  571 ttgggaattttgtcaaactaaaaggaccaaaagt 604  Q
    ||||||||| ||||||||||||||||||||||||    
T  1441527 ttgggaattatgtcaaactaaaaggaccaaaagt 1441560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 375 - 440
Target Start/End: Original strand, 5805101 - 5805166
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    |||| ||||||||||| |||||| ||||| || || |||||||||||||||||  || ||||||||    
T  5805101 ggtccttttagtttgacagaattctcaagctattcctttaagtttcaaaagttttaactaggtcct 5805166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 483
Target Start/End: Complemental strand, 34951492 - 34951415
Alignment:
Q  406 agtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    |||| ||||||||||||||||   || || | ||| ||| ||||| | |||||||||||||||| |||||||||||||    
T  34951492 agtcctttaagtttcaaaagtataaaatatgaccttttagtttgacacaattctcaagttagtcatttaagtttcaaa 34951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 5e-52; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 358 - 569
Target Start/End: Original strand, 45017732 - 45017952
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||| |||||||||| ||||||||||||||||||  |||||||||| |||||||||| |||||| |||||| ||| | ||| ||| | ||||||    
T  45017732 ggccaaatactacttttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaatt 45017831  T
Q  458 ctcaagttagtcctttaag---------tttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttctttt 548  Q
    | ||| |||||||||||||         ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| ||  ||||    
T  45017832 cccaaattagtcctttaagattcaaaaatttcaaataagtcattttaattgataaactatttcaccgtcaccgtttcaaaggtttcaaataggtcatttt 45017931  T
Q  549 agtttgaaatttttgaaactt 569  Q
    |||||||||||||||||||||    
T  45017932 agtttgaaatttttgaaactt 45017952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 358 - 602
Target Start/End: Original strand, 11113536 - 11113781
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||| ||||| | || ||||||||||| | ||||   ||||||||| ||||| |||  |||||| |||| ||||||| ||| ||||| ||||||    
T  11113536 ggccaaataccactttagatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatt 11113635  T
Q  458 ctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaa 557  Q
      ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||| | |||||||||||  |||||||||||||    
T  11113636 tccaagttagtcctttaagtttcaaataagttattttagttgataaactatttcatcgtcaccgtttcaaaagcttcaaatatgtcattttagtttgaaa 11113735  T
Q  558 tttttgaaact-ttttgggaattttgtcaaactaaaaggaccaaaa 602  Q
     ||   | |||  |||||||||||||||||| ||||||||||||||    
T  11113736 cttaaaagactagtttgggaattttgtcaaattaaaaggaccaaaa 11113781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 356 - 569
Target Start/End: Complemental strand, 9770935 - 9770713
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    |||||||||||| |||||||||| ||||||||||| | |||| ||||||||||| |||||||||| |||||| |||||| ||| | ||| ||||| ||||    
T  9770935 aaggccaaataccacttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaa 9770836  T
Q  456 ttctcaagttagtccttt---------aagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttctt 546  Q
    ||| ||||||||||||||         |||||||||||| ||| |||||||||||||||||||||||| |||   ||||||| ||||||||||  | |||    
T  9770835 ttcccaagttagtcctttaattttcaaaagtttcaaataggtccttttagttgataaactatttcaccatcactatttcaaaagtttcaaatagatcctt 9770736  T
Q  547 ttagtttgaaatttttgaaactt 569  Q
    |||||||||||||||||||||||    
T  9770735 ttagtttgaaatttttgaaactt 9770713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 357 - 569
Target Start/End: Original strand, 36359885 - 36360106
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||| |||||| ||| |||||| ||||||||||| ||||||  |||||||||| |||||||||| |||||| |||||||||  | ||| ||||| |||||    
T  36359885 aggctaaataccactcttggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacagaat 36359984  T
Q  457 tctcaagttagtcctttaagt---------ttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttt 547  Q
    || ||||||||||||||||||         |||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||  | ||||    
T  36359985 tcccaagttagtcctttaagttttaaaagtttcaaataggtcattttagttgataaactattttaccgtcaccgtttcaaaagtttcaaataaatccttt 36360084  T
Q  548 tagtttgaaatttttgaaactt 569  Q
    |||||||||| |||||||||||    
T  36360085 tagtttgaaacttttgaaactt 36360106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 357 - 516
Target Start/End: Complemental strand, 30576808 - 30576640
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||| |||||| || |||| || ||||||||||| |||||| ||||||||||| | ||||||||||||||| |||||||||||| ||| ||||| |||||    
T  30576808 aggctaaatactacgtttgatccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaat 30576709  T
Q  457 tctcaagttagtcctttaagtttc---------aaataagtcattttagttgataaactatttcaccgt 516  Q
    || |||||||||||||||||||||         ||||| ||||||||||||||||||||||||||||||    
T  30576708 tcccaagttagtcctttaagtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgt 30576640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 375 - 516
Target Start/End: Complemental strand, 40553369 - 40553228
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| ||||||||||| | ||||   ||||||||| ||||||||||||||||| ||||| |||||| ||| ||||| ||||||||||||||| || ||||    
T  40553369 ggtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 40553270  T
Q  475 agtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  40553269 agtttcaaatagatcattttacttgataaactatttcaccgt 40553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 358 - 510
Target Start/End: Complemental strand, 14871496 - 14871342
Alignment:
Q  358 ggccaaatacaactttt-ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaattt-gatagaa 455  Q
    |||||||||| |||||| |||| ||| ||||||| ||||||   ||||||||| |||||||||| |||||| ||||||||| || ||| ||| || | ||    
T  14871496 ggccaaataccactttttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataa 14871397  T
Q  456 ttctcaagttagtcctttaagtttcaaataagtcattttagttgataaactattt 510  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  14871396 ttctcaaattagtcctttaagtttcaaataggtccttttagttgataaactattt 14871342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 357 - 483
Target Start/End: Complemental strand, 39701541 - 39701415
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| || ||||||| ||||||||||| |||||| ||||||||||  ||||||||||||||||| |||||| ||||| ||| |||||||||||    
T  39701541 aggccaaataccacgtttggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaat 39701442  T
Q  457 tctcaagttagtcctttaagtttcaaa 483  Q
    || ||  |||||| |||||||||||||    
T  39701441 tcccagattagtcatttaagtttcaaa 39701415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 357 - 498
Target Start/End: Original strand, 9770545 - 9770686
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||||| |||| ||||||| || || ||| |||| ||||||  ||||||| ||||||||||||| |||||| |||||| ||||| ||| ||||| |||||    
T  9770545 aggccagataccacttttgctccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaat 9770644  T
Q  457 tctcaagttagtcctttaagtttcaaataagtcattttagtt 498  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||    
T  9770645 tctcaagttagtcatttaagtttcaaataggtccttttagtt 9770686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 358 - 483
Target Start/End: Original strand, 16197014 - 16197139
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||| |||||||||| |||| |||||| ||||||||||||||||||  ||||||||| |||||| |||||| ||||| ||| ||||| ||||||    
T  16197014 ggccaaatactacttttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtttgacagaatt 16197113  T
Q  458 ctcaagttagtcctttaagtttcaaa 483  Q
    | ||||||| || |||||||||||||    
T  16197114 cccaagttaatcatttaagtttcaaa 16197139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 369 - 512
Target Start/End: Complemental strand, 6236365 - 6236222
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    ||||| |||| ||||||||| | | ||||  ||||||| |  |||||||||||| |||| |||||||||||| ||||||||| ||| ||| |||||||||    
T  6236365 actttcggtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagt 6236266  T
Q  469 cctttaagtttcaaataagtcattttagttgataaactatttca 512  Q
     |||||||||||||||| ||||||||| |||| |||||||||||    
T  6236265 actttaagtttcaaataggtcattttaattgaaaaactatttca 6236222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 380 - 513
Target Start/End: Complemental strand, 25730249 - 25730106
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaa-ttaggtcctcttaatttgatagaattctcaagttagtccttt----- 473  Q
    ||||||||||||||||||  |||||||||| |||||||||  |||||| ||| ||||||| | ||||||||| ||||||||||||||||||||||         
T  25730249 ttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcctttaaatt 25730150  T
Q  474 ----aagtttcaaataagtcattttagttgataaactatttcac 513  Q
        |||||||||||| |||||||||||||||||||||||||||    
T  25730149 tcaaaagtttcaaatatgtcattttagttgataaactatttcac 25730106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 377 - 483
Target Start/End: Complemental strand, 9277112 - 9277006
Alignment:
Q  377 tcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaag 476  Q
    |||||||||||||| ||||||  |||||||||| |||||||||| |||||| ||||||| |||| ||| ||||||||||||  |||||||||||||||||    
T  9277112 tcattttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaatttccaagttagtcctttaag 9277013  T
Q  477 tttcaaa 483  Q
    |||||||    
T  9277012 tttcaaa 9277006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 357 - 483
Target Start/End: Complemental strand, 36360223 - 36360097
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| | |||||||||||||||||||| ||||||  |||||||||| |||||||||| |||||| ||| || ||| | ||||||||| | |||    
T  36360223 aggccaaataccaattttggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaat 36360124  T
Q  457 tctcaagttagtcctttaagtttcaaa 483  Q
    |  ||||||||||||||||||||||||    
T  36360123 tgccaagttagtcctttaagtttcaaa 36360097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 357 - 569
Target Start/End: Complemental strand, 29794406 - 29794186
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||  | |||||||||||||||||||| ||||||  |||||||||| ||||| |||| ||||||   |||||||||| ||| ||||| | |||    
T  29794406 aggccaaatatcatttttggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataat 29794307  T
Q  457 tctcaagttagtcctttaagttt---------caaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttt 547  Q
    |  |||||||||| |||||||||         ||||||  || |||||||||||||| ||||||||||||| ||||| ||| |||||||||| ||  |||    
T  29794306 ttccaagttagtcttttaagtttcaaaagtttcaaatagatccttttagttgataaattatttcaccgtcaccgttt-aaaggtttcaaataagtctttt 29794208  T
Q  548 tagtttgaaatttttgaaactt 569  Q
    || ||||||| |||||||||||    
T  29794207 tactttgaaacttttgaaactt 29794186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 380 - 513
Target Start/End: Complemental strand, 25737735 - 25737592
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaa-ttaggtcctcttaatttgatagaattctcaagttagtccttt----- 473  Q
    ||||||||||||||||||  |||||||||| |||||||||  |||||| ||| ||||||| | ||||||||| ||||||||||||||||||||||         
T  25737735 ttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcctttaaatt 25737636  T
Q  474 ----aagtttcaaataagtcattttagttgataaactatttcac 513  Q
        ||||||||||||  ||||||||||||||||||||||||||    
T  25737635 tcaaaagtttcaaatatttcattttagttgataaactatttcac 25737592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 362 - 483
Target Start/End: Original strand, 8713835 - 8713956
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| |||||||||| ||||||||||| | |||| ||||||||||| ||||||||||||||||| ||||||  | || ||| ||||| | ||||| ||    
T  8713835 aaataccacttttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaattcaca 8713934  T
Q  462 agttagtcctttaagtttcaaa 483  Q
    |||||||| |||||||||||||    
T  8713935 agttagtcttttaagtttcaaa 8713956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 23553335 - 23553507
Alignment:
Q  353 tttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgata 452  Q
    ||||||| ||||||| |  |||| || ||||||||||| |||||| |||| ||  || |||||||||| |||||| |||||||||||| ||| ||||| |    
T  23553335 tttaaggtcaaataccatgtttgatccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgaca 23553434  T
Q  453 gaattctcaagttagtccttt---------aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
     |||||||||||| ||| |||         |||||||||||| ||||||||||||||||||||||||||||||    
T  23553435 aaattctcaagttggtcttttaaatttcaaaagtttcaaataggtcattttagttgataaactatttcaccgt 23553507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 359 - 483
Target Start/End: Original strand, 25737090 - 25737214
Alignment:
Q  359 gccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattc 458  Q
    ||||||||| |  ||||||| ||||||||||| | |||| ||||||||||| ||||||||||||||||| ||| ||| |||| ||| |||||  ||||||    
T  25737090 gccaaataccatatttggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattc 25737189  T
Q  459 tcaagttagtcctttaagtttcaaa 483  Q
      ||||||||||||||| |||||||    
T  25737190 ctaagttagtcctttaaatttcaaa 25737214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 371 - 514
Target Start/End: Complemental strand, 44041422 - 44041270
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||| ||| ||||||||||| | |||| ||||||||||| |||||||||  |||||| |||||| ||||| ||| ||||| |||||||  |||||||||     
T  44041422 tttttgtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtttgacagaattcctaagttagtct 44041323  T
Q  471 tttaag---------tttcaaataagtcattttagttgataaactatttcacc 514  Q
    || |||         ||||||||||||||||||||||||||||||||||||||    
T  44041322 ttaaagtttcaaaaatttcaaataagtcattttagttgataaactatttcacc 44041270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 380 - 513
Target Start/End: Complemental strand, 8714479 - 8714337
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||||||||||||  |||||||||| |||||| |||||||||| ||| ||| | || ||| ||||||||||||| |||||||||  |||||||||    
T  8714479 ttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaagttt 8714380  T
Q  480 c---------aaataagtcattttagttgataaactatttcac 513  Q
    |         ||||| ||| |||||||||||||||||||||||    
T  8714379 ctaaagttttaaataggtctttttagttgataaactatttcac 8714337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 375 - 516
Target Start/End: Original strand, 39700887 - 39701037
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttt- 473  Q
    |||| ||||||||||| | |||| | ||||||||| ||||||||| ||||||| |||||| ||||| ||| ||||| | |||||  |||||| ||||||     
T  39700887 ggtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtttgacaaaattcctaagttaatccttta 39700986  T
Q  474 --------aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
            |||||||||||| ||||||||||||||||||||||||||||||    
T  39700987 agtttcaaaagtttcaaatatgtcattttagttgataaactatttcaccgt 39701037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 357 - 483
Target Start/End: Original strand, 43422842 - 43422968
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||| |||||| ||||||| |  ||||||||||||| |||| |||| |||||| |||||||||  |||||| |||||||||||| ||| |||   | |||    
T  43422842 aggcgaaataccacttttgattcttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattttagcaaaat 43422941  T
Q  457 tctcaagttagtcctttaagtttcaaa 483  Q
    || ||||||||||||||||||||||||    
T  43422942 tcccaagttagtcctttaagtttcaaa 43422968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 372 - 483
Target Start/End: Original strand, 4613739 - 4613850
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||| ||||||||||| |||||| |||||||| || ||||| |||  |||||| |||||| ||||| ||| ||||| | |||| || ||||||||||    
T  4613739 tttggtccttttagtttgaaagaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttcgagttagtcct 4613838  T
Q  472 ttaagtttcaaa 483  Q
    ||||||||||||    
T  4613839 ttaagtttcaaa 4613850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 455
Target Start/End: Complemental strand, 36314791 - 36314697
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    ||||||| |||||||||| ||||||||||| | |||||||||||||||| ||||| |||| |||||| |||||| ||||| ||| ||||| ||||    
T  36314791 caaataccacttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtttgacagaa 36314697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 369 - 483
Target Start/End: Complemental strand, 43423228 - 43423115
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||||||| ||||||||||| | ||||   |||||||| ||||||||||| |||||| |||||| || || ||| ||| ||||||||||||| ||| |    
T  43423228 acttttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagt-cttttagtttcatagaattctcaatttact 43423130  T
Q  469 cctttaagtttcaaa 483  Q
    |||||||||||||||    
T  43423129 cctttaagtttcaaa 43423115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 13771962 - 13771885
Alignment:
Q  350 aaatttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||| |||||||||||| | |||||||||||||||||||| | ||||  |||||||||| |||||||||||||||||    
T  13771962 aaattaaaggccaaataccatttttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtt 13771885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 435 - 508
Target Start/End: Original strand, 23179049 - 23179122
Alignment:
Q  435 ggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactat 508  Q
    |||||| ||| ||||| ||||||| ||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  23179049 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaagtaggtcgttttagttgataaactat 23179122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 372 - 516
Target Start/End: Complemental strand, 31169617 - 31169465
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||||||||||||||| | |||| ||||||||||| |||||||||  |||||| ||| ||| || | ||| |||||   ||||||||| ||||||||    
T  31169617 tttggtcattttagtttgacaaaattctcaagttagtcctttaagttt-taaagtttcaaatagatcattttagtttgacgaaattctcaaattagtcct 31169519  T
Q  472 tt---------aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||         |||||||||||| |||||||||||||||||| |||||||||||    
T  31169518 ttaagttttaaaagtttcaaatatgtcattttagttgataaaatatttcaccgt 31169465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 362 - 483
Target Start/End: Complemental strand, 45018062 - 45017943
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| |||||| ||| ||||||||||| | |||  ||||||||||| |||||||||| ||||||  ||||||||||| ||| ||||| | | ||| ||    
T  45018062 aaataccacttttagtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtttgaca-agttc-ca 45017965  T
Q  462 agttagtcctttaagtttcaaa 483  Q
    ||||||||||||||||||||||    
T  45017964 agttagtcctttaagtttcaaa 45017943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 9770628 - 9770722
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||||| |||||| |||||||||||||||||||||||||         |||||||| ||| ||||| |||||||  |||||||||||||||||||    
T  9770628 ttttagtttgagagaattctcaagttagtcatttaagtttcaaa---------taggtccttttagtttgacagaattccgaagttagtcctttaagttt 9770718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 483
Target Start/End: Complemental strand, 23553993 - 23553890
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||||| |||||| | ||||||||| |||||||||| || |||  ||||| ||| | ||| ||||||||||||||||||||||| | | ||||||    
T  23553993 ttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagttt 23553894  T
Q  480 caaa 483  Q
    ||||    
T  23553893 caaa 23553890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 35433884 - 35433951
Alignment:
Q  360 ccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||  ||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  35433884 ccaaatacctcttttggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagtt 35433951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 483
Target Start/End: Complemental strand, 41190396 - 41190293
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||||| |||||| |||| |||||  ||||| |||| ||| || |||||||||| | ||| |||||||||||||||||  ||||| |||||||||    
T  41190396 ttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctcaatctagtcatttaagttt 41190297  T
Q  480 caaa 483  Q
    ||||    
T  41190296 caaa 41190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 357 - 513
Target Start/End: Original strand, 9276466 - 9276632
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagt-catttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    ||||||||||  |||||||||| ||||||||||| | |||| ||||  |||| | |||||||||  |||||| |||||||||| |  || ||||| ||||    
T  9276466 aggccaaatatcacttttggtccttttagtttgacaaaattctcaaaatagttcttttaagttttgaaagtttcaattaggtctttatagtttgacagaa 9276565  T
Q  456 ttctcaagttagtccttt---------aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    ||||||||||||||  ||         |||||||||||| ||| |||||||||||||||||||||||    
T  9276566 ttctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagttgataaactatttcac 9276632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 403 - 479
Target Start/End: Original strand, 39700855 - 39700931
Alignment:
Q  403 gttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||| |||||||||  |||||| |||||||||||| ||| ||||| | |||||| |||||||||||||||||||    
T  39700855 gttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagttagtcctttaagttt 39700931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 483
Target Start/End: Original strand, 43422945 - 43423028
Alignment:
Q  400 caagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    |||||||||| ||||||||||||||||| ||| |||||| | ||| ||||| | ||||  |||||||||||||||| |||||||    
T  43422945 caagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagtcctttaaatttcaaa 43423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 43423158 - 43423063
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaa 475  Q
    ||||||||| |||||||| |||| ||| || ||||||||||||||||| ||| |||||| | ||| ||||| | ||||| ||||||||| ||||||    
T  43423158 ttttagtttcatagaattctcaatttactcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagttagtactttaa 43423063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 438
Target Start/End: Complemental strand, 9277049 - 9276991
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtc 438  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||| ||| ||||||    
T  9277049 ttttagtttgatagaatttccaagttagtcctttaagtttcaaaagtttcaaataggtc 9276991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 380 - 512
Target Start/End: Complemental strand, 16208815 - 16208674
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttt------ 473  Q
    ||||||||||| |||||| ||||||||||  ||||||||| | |  || ||| ||| || | ||| ||| |||||||| |||||||||||||||          
T  16208815 ttttagtttgacagaattctcaagttagttctttaagttttatagatttcaaatagatcattttagttttatagaattttcaagttagtcctttgagttt 16208716  T
Q  474 ---aagtttcaaataagtcattttagttgataaactatttca 512  Q
       |||||||||||| ||| ||||||||||||||||||||||    
T  16208715 caaaagtttcaaatatgtccttttagttgataaactatttca 16208674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 375 - 424
Target Start/End: Complemental strand, 41190341 - 41190292
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaa 424  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  41190341 ggtcattttagtttgatagaattctcaatctagtcatttaagtttcaaaa 41190292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 475
Target Start/End: Original strand, 14870954 - 14871041
Alignment:
Q  387 ttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaa 475  Q
    |||| |||||| ||||||||||| ||||| ||||||||| | ||| ||  |||||||||||||| |||||||  |||||||||||||||    
T  14870954 ttgacagaattttcaagttagtc-tttaaatttcaaaagattcaaataaatcctcttaatttgacagaattcataagttagtcctttaa 14871041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 465
Target Start/End: Complemental strand, 29792666 - 29792558
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| | |||| ||| ||||||||||| ||||||  ||| |||||| ||||| |||| |||||| | ||||| |||| ||| ||||| | |||    
T  29792666 aggccaaataccatttttagtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtttgacataat 29792567  T
Q  457 tctcaagtt 465  Q
    |||||||||    
T  29792566 tctcaagtt 29792558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 435 - 483
Target Start/End: Original strand, 35433899 - 35433947
Alignment:
Q  435 ggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  35433899 ggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaa 35433947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 13771425 - 13771472
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtt 13771472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 377 - 440
Target Start/End: Complemental strand, 16208758 - 16208695
Alignment:
Q  377 tcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    |||||||||||| |||||||| ||||||||||| ||| ||||||||||||| ||| || |||||    
T  16208758 tcattttagttttatagaattttcaagttagtcctttgagtttcaaaagtttcaaatatgtcct 16208695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 474 - 513
Target Start/End: Complemental strand, 35434352 - 35434313
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  35434352 aagtttcaaatatgtcattttagttgataaactatttcac 35434313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 40553312 - 40553261
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    ||||||| ||||||||||| |||||| |||||||| ||||||||||||||||    
T  40553312 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 40553261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 364 - 483
Target Start/End: Complemental strand, 40553440 - 40553321
Alignment:
Q  364 atacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaag 463  Q
    |||||| |||||||| ||||||||||| | ||||   || |||||| ||| ||||| ||||||| |||| ||||||| ||| ||||| | ||||   |||    
T  40553440 atacaatttttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaag 40553341  T
Q  464 ttagtcctttaagtttcaaa 483  Q
    |||||| |||||||||||||    
T  40553340 ttagtcttttaagtttcaaa 40553321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 435 - 516
Target Start/End: Complemental strand, 34686968 - 34686878
Alignment:
Q  435 ggtcctcttaatttgatagaattctcaagttagtcctttaa---------gtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||| ||||||||| |||||| |||||||||||||||||         |||| ||||| ||| ||||||||||||||||||||||||||    
T  34686968 ggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactatttcaccgt 34686878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 422
Target Start/End: Original strand, 23179032 - 23179096
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaa 422  Q
    ||||||||||| | |||||||| ||||||||||| ||||||  |||||||||| ||||||||||||    
T  23179032 aggccaaatacca-ttttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 5358650 - 5358710
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    ||||||||||| |||||| ||||||||||| || ||||||||||||||  || ||||||||    
T  5358650 ttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtcct 5358710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 16197096 - 16197156
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    ||||||||||| ||||||  ||||||| |||||||||||||||||||  ||| ||||||||    
T  16197096 ttttagtttgacagaattcccaagttaatcatttaagtttcaaaagtatcaaataggtcct 16197156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 25730193 - 25730141
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||||||| ||||| |||||| ||||||||||| ||||| |||||||||||    
T  25730193 ggtcattttaatttgacagaattctcaagttagtcctttaaatttcaaaagtt 25730141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 356 - 440
Target Start/End: Complemental strand, 29030267 - 29030183
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    |||| ||||||| |||||||||||||||||||||| | ||||    ||||| || |||||||||| |||||| |||||| |||||    
T  29030267 aaggtcaaataccacttttggtcattttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtcct 29030183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 380 - 440
Target Start/End: Complemental strand, 39701458 - 39701398
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    ||||||||||||||||||  ||  ||||||||||||||||||||| || ||| ||||||||    
T  39701458 ttttagtttgatagaattcccagattagtcatttaagtttcaaaactttcaaataggtcct 39701398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 604
Target Start/End: Complemental strand, 9276513 - 9276478
Alignment:
Q  569 ttttgggaattttgtcaaactaaaaggaccaaaagt 604  Q
    ||||| ||||||||||||||||||||||||||||||    
T  9276513 ttttgagaattttgtcaaactaaaaggaccaaaagt 9276478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 427
Target Start/End: Complemental strand, 23553937 - 23553886
Alignment:
Q  376 gtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||||||||||||||||||| ||||||||||   | ||||||||||||||    
T  23553937 gtcattttagtttgatagaattctcaagttagttcctcaagtttcaaaagtt 23553886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 440
Target Start/End: Complemental strand, 34686974 - 34686903
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    |||| ||||| ||||| ||||| |||||||||||||||||| ||||| ||| |||||||  || ||||||||    
T  34686974 acttatggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtcct 34686903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 513
Target Start/End: Original strand, 44040872 - 44040911
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  44040872 aagttttaaataggtcattttagttgataaactatttcac 44040911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 446 - 516
Target Start/End: Complemental strand, 5359120 - 5359050
Alignment:
Q  446 tttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||||| |||||| |||| ||| |||||||||||| |||||   | |||||||||||||| |||||||||||    
T  5359120 tttgacagaattatcaaattaatcctttaagttttaaatacaccgttttagttgataaattatttcaccgt 5359050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 575 - 609
Target Start/End: Original strand, 9770893 - 9770927
Alignment:
Q  575 gaattttgtcaaactaaaaggaccaaaagttgtat 609  Q
    |||||||||||||||||||||||||||||| ||||    
T  9770893 gaattttgtcaaactaaaaggaccaaaagtggtat 9770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 361 - 483
Target Start/End: Original strand, 40552750 - 40552872
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| || ||| ||| ||||||||||| |||||| |||||||| |||||||| |||  |||||| |||||| |   | ||| ||||| | |||| ||    
T  40552750 caaataccacgtttcgtcgttttagtttgacagaattttcaagttaatcatttaaattttgaaagtttcaattaagatattttagtttgacaaaattttc 40552849  T
Q  461 aagttagtcctttaagtttcaaa 483  Q
    ||||||| | ||||| |||||||    
T  40552850 aagttagccatttaaatttcaaa 40552872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 609
Target Start/End: Original strand, 36314755 - 36314788
Alignment:
Q  576 aattttgtcaaactaaaaggaccaaaagttgtat 609  Q
    ||||||||||||||||||||||||||||| ||||    
T  36314755 aattttgtcaaactaaaaggaccaaaagtggtat 36314788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 87; Significance: 3e-41; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 371 - 513
Target Start/End: Original strand, 9393 - 9535
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||| ||| ||||||||||| |||||| | ||||||||||||||||||||  ||||| |||||||||||| ||| ||| ||||||||||||||||||| |    
T  9393 ttttcgtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaatagaattctcaagttagttc 9492  T
Q  471 tttaagtttcaaataagtcattttagttgataaactatttcac 513  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  9493 tttaagtttcaaataggtccttttagttgataaactatttcac 9535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 478
Target Start/End: Complemental strand, 9989 - 9891
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtt 478  Q
    ||||||||||| |||||| ||||||||||  |||||||||| |||||| ||||||| |||| ||| ||||| | ||||| |||||||||||||| ||||    
T  9989 ttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcccaagttagtccttttagtt 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 4e-40; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 351 - 516
Target Start/End: Original strand, 19631742 - 19631911
Alignment:
Q  351 aatttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttga 450  Q
    ||||| ||||||||||  || ||||||| ||||| ||||| | |||| ||||||||||| |||||||||| |||||| |||||||||||| ||| |||||    
T  19631742 aattttaggccaaatatcacgtttggtccttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttga 19631841  T
Q  451 tagaattctcaag----ttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
     ||||||||||||    |||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  19631842 cagaattctcaagttaattagtcctttaagtttcaaataggtcattttagttgataaactattttaccgt 19631911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 26330063 - 26329865
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||| | ||||||  |||||||||| ||||||||||||||||| ||| |||||||| ||| ||||| | ||||| |||||||||| |||||||||    
T  26330063 ttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacataattcccaagttagtcatttaagttt 26329964  T
Q  480 caaa---------taagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaatttttgaaactt 569  Q
    ||||         || ||||||||||||||||||||||||||| |||| | ||||||| |||||||||| || |||||||||||||| |||||||||||    
T  26329963 caaaagtttcaaataggtcattttagttgataaactatttcactgtcaccatttcaaaagtttcaaataagtccttttagtttgaaacttttgaaactt 26329865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 362 - 516
Target Start/End: Complemental strand, 52183558 - 52183404
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| || ||||||| ||||||||| | | |||| ||||||||||| |||||||||| |||||| |||||||| ||| ||| ||||| ||||||| ||    
T  52183558 aaataccacgtttggtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattccca 52183459  T
Q  462 agttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||  |||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  52183458 agccagtcctttaagtttcaaataagttttttaagttgataaactatttcaccgt 52183404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 358 - 512
Target Start/End: Original strand, 52865942 - 52866096
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||| |||||| ||| ||||||||||| |||||| ||||||||||| |||||||||  ||||||  ||||| || || ||| ||||| | |||     
T  52865942 ggccaaataccactttttgtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatg 52866041  T
Q  458 ctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttca 512  Q
    |||||  ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52866042 ctcaatctagtcctttaagtttcaaataggtcattttagttgataaactatttca 52866096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 357 - 478
Target Start/End: Complemental strand, 22025440 - 22025319
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||||||| || ||||||| |||||| ||||||||| || ||| ||||| |||||    
T  22025440 aggccaaatacaacttttagtcattttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtttgacagaat 22025341  T
Q  457 tctcaagttagtcctttaagtt 478  Q
    || |||||||||||||||||||    
T  22025340 tcccaagttagtcctttaagtt 22025319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 375 - 483
Target Start/End: Complemental strand, 2789036 - 2788928
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||||||| ||| |||||| | ||| ||||| |||||||||||||||||| ||||    
T  2789036 ggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagtcattta 2788937  T
Q  475 agtttcaaa 483  Q
    |||||||||    
T  2788936 agtttcaaa 2788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 356 - 483
Target Start/End: Complemental strand, 26330147 - 26330020
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    |||||||||||| |||||| ||| ||||||||||| |||||| ||||||||||| |||||||||  |||||| ||||||| |||| ||| ||| | ||||    
T  26330147 aaggccaaataccacttttagtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaa 26330048  T
Q  456 ttctcaagttagtcctttaagtttcaaa 483  Q
    ||| ||||||||||||||||||||||||    
T  26330047 ttcccaagttagtcctttaagtttcaaa 26330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 369 - 515
Target Start/End: Complemental strand, 8408987 - 8408832
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||||||||||||||||||| | |||| |||||||||||||||||||||| ||| || |||| | || || ||| ||||| |||||| ||||||||||    
T  8408987 acttttggtcattttagtttgacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgacagaattttcaagttagt 8408888  T
Q  469 cctttaagttt---------caaataagtcattttagttgataaactatttcaccg 515  Q
    | |||||||||         |||||| ||||| |||||||||||||||||||||||    
T  8408887 catttaagtttcaaaagtttcaaataggtcatcttagttgataaactatttcaccg 8408832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 2788779 - 2788893
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| ||||||  || ||||||||||||  |||| ||||||||||| |||||||||| |||||| |||||||||||| ||| ||||| |||||||||    
T  2788779 caaataccacttttaatccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctc 2788878  T
Q  461 aagttagtcctttaa 475  Q
    |||||||| ||||||    
T  2788879 aagttagtactttaa 2788893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 482 - 557
Target Start/End: Complemental strand, 36890652 - 36890577
Alignment:
Q  482 aataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaa 557  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||||||||    
T  36890652 aataggtcattttagttgataaactatttcaccgtcaccgtttcaaaagtttcaaatatgtcattttagtttgaaa 36890577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 357 - 483
Target Start/End: Complemental strand, 43098551 - 43098425
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||| |||||| | |||||||| ||||||||||| ||||||   || |||||  |||||||||| |||||| |||||||||||| ||| ||||| | |||    
T  43098551 aggctaaataccatttttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaat 43098452  T
Q  457 tctcaagttagtcctttaagtttcaaa 483  Q
    || ||||||||||||||||||||||||    
T  43098451 tcccaagttagtcctttaagtttcaaa 43098425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 422 - 569
Target Start/End: Original strand, 22025103 - 22025259
Alignment:
Q  422 aaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaag---------tttcaaataagtcattttagttgataaactatttca 512  Q
    |||||| |||||||||| | ||| ||||| |||||||| |||||||||| |||||         ||||||||| ||  ||||||||||||||||||||||    
T  22025103 aaagtttcaattaggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaactatttca 22025202  T
Q  513 ccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaatttttgaaactt 569  Q
    |||| | ||||||||| ||||||||||  | |||||||||||||| | |||||||||    
T  22025203 ccgtaaccgtttcaaaagtttcaaatagctccttttagtttgaaactgttgaaactt 22025259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 372 - 483
Target Start/End: Original strand, 31229254 - 31229366
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcattt-aagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    ||||||| ||||| ||||| |||||| |||| |||||| ||| ||||||| |||||| || ||||||| | ||| ||||||||||||||||||||||||     
T  31229254 tttggtctttttaatttgacagaattttcaaattagtccttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagttagtca 31229353  T
Q  471 tttaagtttcaaa 483  Q
    |||||||||||||    
T  31229354 tttaagtttcaaa 31229366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 361 - 557
Target Start/End: Original strand, 43098171 - 43098371
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| |||||||||| ||||||||||| | ||||   ||||||||| |||||||||  |||||| |||||||||||| ||| |||   ||| |||      
T  43098171 caaataccacttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtttaccagagttccg 43098270  T
Q  461 aagttagtcc--ttt---aagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttga 555  Q
    |||||||||   |||   |||||||||||||||| |||||||||||||||||||||||  ||| || |||||| ||||||||||  |  |||||||||||    
T  43098271 aagttagtcaagtttcaaaagtttcaaataagtccttttagttgataaactatttcacgatcaccg-ttcaaaagtttcaaatagatcattttagtttga 43098369  T
Q  556 aa 557  Q
    ||    
T  43098370 aa 43098371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 371 - 483
Target Start/End: Complemental strand, 52568320 - 52568208
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||| ||||||||||||||| | || |  ||| |||||  ||||| ||||||||||| |||||||||| | ||| ||||||||||||||||||| |||||    
T  52568320 ttttagtcattttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtttgatagaattctcaagtcagtcc 52568221  T
Q  471 tttaagtttcaaa 483  Q
    |||||||||||||    
T  52568220 tttaagtttcaaa 52568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 436 - 513
Target Start/End: Complemental strand, 44916371 - 44916294
Alignment:
Q  436 gtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcac 513  Q
    ||||| ||| ||||| | |||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  44916371 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaataggttattttagttgataaactatttcac 44916294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 483
Target Start/End: Complemental strand, 43098473 - 43098365
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| ||||||||||| | ||||  |||||||||| ||||||||||||||||| ||| || ||| | ||| ||| | ||||||| |||||||||||||||    
T  43098473 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtttaacagaattcccaagttagtccttta 43098374  T
Q  475 agtttcaaa 483  Q
    |||||||||    
T  43098373 agtttcaaa 43098365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 2909183 - 2909286
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||| | |||||| ||||||||||  |||||||||| |||||  ||||||||| || ||| ||| | |||||||||||||||||||||||| |||    
T  2909183 ttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagttttacagaattctcaagttagtcctttaaattt 2909282  T
Q  480 caaa 483  Q
    ||||    
T  2909283 caaa 2909286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 371 - 498
Target Start/End: Complemental strand, 23085331 - 23085205
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||||||  ||||||||||| |||| | | ||||||||| ||||||||||||||||| |||||||   || ||| ||| |||||||| |||| |||||||    
T  23085331 ttttggttcttttagtttgacagaaattttaagttagtc-tttaagtttcaaaagtttcaattagaatcttttagttttatagaattttcaaattagtcc 23085233  T
Q  471 tttaagtttcaaataagtcattttagtt 498  Q
    ||||| ||| ||||||||| ||||||||    
T  23085232 tttaaattttaaataagtctttttagtt 23085205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 454 - 516
Target Start/End: Complemental strand, 30543170 - 30543108
Alignment:
Q  454 aattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  30543170 aattatcaagttagtcctttaaatttcaaataaatcattttaattgataaactatttcaccgt 30543108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 437
Target Start/End: Original strand, 31229318 - 31229380
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggt 437  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  31229318 ggtctttttagtttgatagaattctcaagttagtcatttaagtttcaaaagtttcaaataggt 31229380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 361 - 498
Target Start/End: Original strand, 35023735 - 35023872
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    |||||| ||||||| ||| ||||||||||| |||||||| || |||||| |||| |||| ||||||| ||||||| || | ||| || |||| ||||||     
T  35023735 caaatataacttttagtccttttagtttgaaagaattattaaattagtcttttacgttttaaaagtttcaattagatcattttagttcgataaaattctt 35023834  T
Q  461 aagttagtcctttaagtttcaaataagtcattttagtt 498  Q
    || |||||| ||||| ||| ||||| ||| ||||||||    
T  35023835 aaattagtcttttaaattttaaataggtccttttagtt 35023872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 374 - 483
Target Start/End: Original strand, 41735814 - 41735923
Alignment:
Q  374 tggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttt 473  Q
    ||||| ||||||||| | | ||||  |||||||||| ||||||||||||||||| ||| |||||||| ||| ||||| ||||||  ||||| ||||||||    
T  41735814 tggtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatttccaagtcagtccttt 41735913  T
Q  474 aagtttcaaa 483  Q
    || |||||||    
T  41735914 aaatttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 371 - 483
Target Start/End: Original strand, 52181714 - 52181826
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    ||||| || ||||||||||| | |||| ||||||||||  ||||| |||  |||||| |||| | ||||| ||| ||||| ||||||| |||||||||||    
T  52181714 ttttgatccttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaagttagtcc 52181813  T
Q  471 tttaagtttcaaa 483  Q
    |||||||||||||    
T  52181814 tttaagtttcaaa 52181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 483
Target Start/End: Complemental strand, 2789091 - 2788988
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||||| | |||| | || |||||| |||||||||   ||||| |||||||||| | ||| ||||| |||||| |||||||||||||||||||||    
T  2789091 ttttagtttgacaaaatttttaaattagtcctttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagttt 2788992  T
Q  480 caaa 483  Q
    ||||    
T  2788991 caaa 2788988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 9320018 - 9320121
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||||| | |||| ||||||||||  |||||||||| |||||| |||||| || || ||| ||||| ||||||||||| |||||| ||||| |||    
T  9320018 ttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaattt 9320117  T
Q  480 caaa 483  Q
    ||||    
T  9320118 caaa 9320121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 381 - 483
Target Start/End: Original strand, 35046437 - 35046539
Alignment:
Q  381 tttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttc 480  Q
    |||||||||| | |||| |||| |||||| |||||||||| ||||||  |||||| |||| ||| ||||| |||||||  || |||||||||||||||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttc 35046536  T
Q  481 aaa 483  Q
    |||    
T  35046537 aaa 35046539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 375 - 440
Target Start/End: Complemental strand, 52568256 - 52568191
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcct 440  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||| ||| ||||    
T  52568256 ggtcattttagtttgatagaattctcaagtcagtcctttaagtttcaaaagtttcaaatagatcct 52568191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 5387134 - 5387237
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    |||||||||||  |||||   ||||||||| ||||||||| ||||||| ||||||  || | ||| ||||| ||||||| |||||||| |||||||||||    
T  5387134 ttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaagttt 5387233  T
Q  480 caaa 483  Q
    ||||    
T  5387234 caaa 5387237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 360 - 427
Target Start/End: Complemental strand, 42116144 - 42116077
Alignment:
Q  360 ccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||||| | |||||||||||||||||||| | |||| | ||||||||| |||||||||||||||||    
T  42116144 ccaaataccatttttggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagtt 42116077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 52567743 - 52567798
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||| ||||||||||| |||||| | |||||||||||||||||||||||||||    
T  52567743 tttggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagtt 52567798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 516
Target Start/End: Original strand, 8408453 - 8408495
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  8408453 aagtttcaaataagtcattttagttgataagctatttcaccgt 8408495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 423
Target Start/End: Complemental strand, 44916390 - 44916324
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    |||||||||||| ||||| ||| ||||||||||| | |||| ||||||||||| |||||||||||||    
T  44916390 aggccaaatacatcttttagtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 354 - 427
Target Start/End: Complemental strand, 19632327 - 19632255
Alignment:
Q  354 ttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||| ||||||| | |||||||| ||||||||||| |||||| |||| |||||| |||||||||||||||||    
T  19632327 ttaaggtcaaatacgatttttggtccttttagtttgacagaattctcaaattagtc-tttaagtttcaaaagtt 19632255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 414 - 483
Target Start/End: Original strand, 26329805 - 26329874
Alignment:
Q  414 aagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    ||||||| |||||| |||||||||||| ||| ||||| ||||||  |||||||| |||||||||||||||    
T  26329805 aagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaa 26329874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 446 - 503
Target Start/End: Complemental strand, 52866404 - 52866347
Alignment:
Q  446 tttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataa 503  Q
    ||||| ||||||| |||||||||||||||||||||||| | ||| |||||||||||||    
T  52866404 tttgacagaattcccaagttagtcctttaagtttcaaaaatgtccttttagttgataa 52866347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 375 - 438
Target Start/End: Complemental strand, 26330008 - 26329945
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtc 438  Q
    |||| ||||||||||| | ||||  |||||||||||||||||||||||||||| ||| ||||||    
T  26330008 ggtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaataggtc 26329945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 478 - 514
Target Start/End: Original strand, 19681304 - 19681340
Alignment:
Q  478 ttcaaataagtcattttagttgataaactatttcacc 514  Q
    |||||||| ||||||||||||||||||||||||||||    
T  19681304 ttcaaataggtcattttagttgataaactatttcacc 19681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 404 - 483
Target Start/End: Original strand, 36890503 - 36890583
Alignment:
Q  404 ttagtcatttaagtttcaaaagttacaattaggtcctctt-aatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    |||||| ||||||||||||||||| ||| || ||| | || ||||||| | ||||  ||||||||||||||||||||||||    
T  36890503 ttagtcttttaagtttcaaaagtttcaaataagtcatttttaatttgacataatttccaagttagtcctttaagtttcaaa 36890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 9320078 - 9320125
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||| |||||| |||| |||||||||||| |||||||||||    
T  9320078 ttttagtttgacagaattctcaatttagtcatttaaatttcaaaagtt 9320125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 35046611 - 35046556
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||| ||||||||||||| | ||||  |||||||||| |||||||||||||||||    
T  35046611 tttggccattttagtttgacataattcccaagttagtcctttaagtttcaaaagtt 35046556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 52181783 - 52181830
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  52181783 ttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtt 52181830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 513
Target Start/End: Original strand, 52567794 - 52567833
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  52567794 aagttttaaataggtcattttagttgataaactatttcac 52567833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 377 - 427
Target Start/End: Original strand, 5387191 - 5387241
Alignment:
Q  377 tcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||||||||||| ||||||  |||||||| | |||||||||||||||||    
T  5387191 tcattttagtttgacagaattcccaagttagccctttaagtttcaaaagtt 5387241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 571 - 609
Target Start/End: Complemental strand, 22025096 - 22025058
Alignment:
Q  571 ttgggaattttgtcaaactaaaaggaccaaaagttgtat 609  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  22025096 ttgggaattctgtcaaactaaaaggaccaaaagtggtat 22025058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 401 - 483
Target Start/End: Complemental strand, 35046642 - 35046560
Alignment:
Q  401 aagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    ||||||||  |||||||||| ||||||  |||| || | | ||| ||||| | ||||| ||||||||||||||||||||||||    
T  35046642 aagttagtgctttaagtttcgaaagttttaatttggccattttagtttgacataattcccaagttagtcctttaagtttcaaa 35046560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 2508252 - 2508317
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||| | ||||| || ||||||||||| ||||||  |||||||||| |||||| ||||||||||    
T  2508252 aaatactatttttgatccttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtt 2508317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 22025051 - 22025100
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagtta 406  Q
    ||||||||||| |||||||||| ||||||||||| ||||||  |||||||    
T  22025051 aggccaaataccacttttggtccttttagtttgacagaattcccaagtta 22025100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 609
Target Start/End: Complemental strand, 43098207 - 43098174
Alignment:
Q  576 aattttgtcaaactaaaaggaccaaaagttgtat 609  Q
    ||||||||||||||||||||||||||||| ||||    
T  43098207 aattttgtcaaactaaaaggaccaaaagtggtat 43098174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 1e-37; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 372 - 516
Target Start/End: Original strand, 10685848 - 10685992
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||| ||||||||||| |||||| ||||||||||| |||||||||| || ||| |||||| ||| | ||| ||||| ||||||  ||||||||||||    
T  10685848 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaagttagtcct 10685947  T
Q  472 ttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  10685948 ttaagtttcaaatatgtcattttagttgataaactattttaccgt 10685992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 11897823 - 11897947
Alignment:
Q  353 tttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgata 452  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||| ||| ||||| |    
T  11897823 tttaaggtcaaataccacttttggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgaca 11897922  T
Q  453 gaattctcaagttagtcctttaagt 477  Q
    |||||| ||||||| ||||||||||    
T  11897923 gaattcccaagttaatcctttaagt 11897947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 357 - 516
Target Start/End: Original strand, 27351036 - 27351204
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||| |||||| || ||||||| ||||| ||||| ||||||  |||||||||| |||||||||| |||||| |||||| ||||| ||| ||||| | |||    
T  27351036 aggcgaaataccacgtttggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataat 27351135  T
Q  457 tctcaagttagtcctttaagtt---------tcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  27351136 tctcaagttagtcctttaagtttcaaaagtatcaaataagtcattttagttgataaactatttcaccgt 27351204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 356 - 513
Target Start/End: Complemental strand, 27351675 - 27351518
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    |||| |||||||||||||||||| ||||| ||||| | |||| |||||||  |  |||||||||| ||||||  ||||| ||| | ||| ||||||||||    
T  27351675 aaggtcaaatacaacttttggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgttttattttgatagaa 27351576  T
Q  456 ttctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcac 513  Q
    ||||||| |||||||||||||||||||||| ||  ||||| |||||||||||||||||    
T  27351575 ttctcaaattagtcctttaagtttcaaataggtgcttttacttgataaactatttcac 27351518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 369 - 516
Target Start/End: Complemental strand, 10686841 - 10686685
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||||||| ||||||||||| |||||| ||||||||||| |||||||||| ||||||  | ||||||||| ||| ||  | |||||||||||||||||    
T  10686841 acttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttacttcaacagaattctcaagttagt 10686742  T
Q  469 ccttt---------aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    | |||         |||||||||||| ||||||||||||||||||||||||||||||    
T  10686741 catttaagttttaaaagtttcaaataggtcattttagttgataaactatttcaccgt 10686685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 380 - 513
Target Start/End: Original strand, 49650581 - 49650715
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc-tttaagtt 478  Q
    ||||||||||| | |||| ||||||||||| ||||| |||  ||| || |||||||||||| ||| ||||| ||||||||||||||||||| ||||||||    
T  49650581 ttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaagttagtccttttaagtt 49650680  T
Q  479 tcaaataagtcattttagttgataaactatttcac 513  Q
    ||||||| ||  ||||||||||||||| |||||||    
T  49650681 tcaaataggttcttttagttgataaaccatttcac 49650715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 350 - 483
Target Start/End: Complemental strand, 17898994 - 17898861
Alignment:
Q  350 aaatttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttg 449  Q
    |||||| ||| ||||||| |||||||||| ||||||||||| |  ||| |||| |||||  ||||||||| |||| || |||||||||||| ||| ||||    
T  17898994 aaattttaggtcaaataccacttttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtttg 17898895  T
Q  450 atagaattctcaagttagtcctttaagtttcaaa 483  Q
    ||||||||| ||| ||||||||||||||||||||    
T  17898894 atagaattcacaaattagtcctttaagtttcaaa 17898861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 359 - 513
Target Start/End: Complemental strand, 48352879 - 48352716
Alignment:
Q  359 gccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattc 458  Q
    ||||||||| |||||||||| ||||||||||| ||||||  | |||||||| |||||||||| |||| | ||||||||||   ||| ||||| | |||||    
T  48352879 gccaaataccacttttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattc 48352780  T
Q  459 tcaagttagtcctttaagtttc---------aaataagtcattttagttgataaactatttcac 513  Q
     |||||||||||||||||||||         ||||| |||||||||||||||||||||||||||    
T  48352779 ccaagttagtcctttaagtttcaaaagttttaaataggtcattttagttgataaactatttcac 48352716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 377 - 475
Target Start/End: Complemental strand, 44964133 - 44964035
Alignment:
Q  377 tcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaa 475  Q
    |||||||||||||| |||||| |||||||| || ||||||||| ||||||| ||| |||||||| ||| ||||| ||||||||||||||||||||||||    
T  44964133 tcattttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagtcctttaa 44964035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 357 - 529
Target Start/End: Original strand, 44963824 - 44964005
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    |||| |||||| ||||||| || ||||||||||||||| || | |||| |||| |||||||||| |||||| |||| | ||||| ||| |||||||| ||    
T  44963824 aggctaaatactacttttgatctttttagtttgatagatttctaaagtaagtcctttaagtttcgaaagtttcaataaagtccttttagtttgataggat 44963923  T
Q  457 tctcaagttagtcctttaagtttc---------aaataagtcattttagttgataaactatttcaccgtcatcgtttcaaat 529  Q
    || ||| |||||||||||||||||         |||||  || ||| |||||||||||||||||||||||| ||||||||||    
T  44963924 tcccaaattagtcctttaagtttcaaaagttttaaatatatcttttcagttgataaactatttcaccgtcaccgtttcaaat 44964005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 401 - 513
Target Start/End: Complemental strand, 49651096 - 49650984
Alignment:
Q  401 aagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttga 500  Q
    ||||||||| || ||||||| ||||||  || ||| || | ||| ||||| |||||||||||||||||||||||||||||||||| |||  |||||||||    
T  49651096 aagttagtccttcaagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtcctttaagtttcaaataggtccctttagttga 49650997  T
Q  501 taaactatttcac 513  Q
    |||||||||||||    
T  49650996 taaactatttcac 49650984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 353 - 479
Target Start/End: Complemental strand, 44964216 - 44964091
Alignment:
Q  353 tttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgata 452  Q
    ||||||||||||||| | ||||| || |||||||| || | |||| ||||||||||| |||||||||| |||||| ||||||| || | ||| ||||| |    
T  44964216 tttaaggccaaataccatttttgatccttttagttagacaaaattctcaagttagtc-tttaagtttcgaaagtttcaattagatcattttagtttgaca 44964118  T
Q  453 gaattctcaagttagtcctttaagttt 479  Q
    |||||||||||||| ||||||||||||    
T  44964117 gaattctcaagttattcctttaagttt 44964091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 483
Target Start/End: Original strand, 34254483 - 34254610
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    ||||||||||||||  |||| || ||||||||||| |||||| ||||||| ||| |||||| ||||||||||  || ||| |||| ||| ||||| ||||    
T  34254483 aaggccaaatacaatgtttgttccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaa 34254582  T
Q  456 ttctcaagttagtcctttaagtttcaaa 483  Q
    |||  |||| ||||||||||||||||||    
T  34254583 ttcctaagtcagtcctttaagtttcaaa 34254610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 369 - 483
Target Start/End: Complemental strand, 29419176 - 29419062
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||||||| ||||||||||| | ||||  |||||||||| || ||||||| |||||| |||||||||||| ||| ||||| |||||||  || |||||    
T  29419176 acttttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaattccaaaattagt 29419077  T
Q  469 cctttaagtttcaaa 483  Q
    | |||||||||||||    
T  29419076 cttttaagtttcaaa 29419062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 483
Target Start/End: Complemental strand, 17898909 - 17898801
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| ||||||||||||||||||  ||| |||||| ||||||||||||||||| ||| || ||| | ||| ||||| |||||| |||| |||||||||||    
T  17898909 ggtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtccttta 17898810  T
Q  475 agtttcaaa 483  Q
    | |||||||    
T  17898809 aatttcaaa 17898801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 474 - 557
Target Start/End: Original strand, 1765804 - 1765887
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaa 557  Q
    |||||| |||||  || |||||||||||||||||||||||||||| || |||||| ||||||||||| | ||||||||||||||    
T  1765804 aagttttaaatagatccttttagttgataaactatttcaccgtcaccgattcaaaagtttcaaatatctccttttagtttgaaa 1765887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 432 - 510
Target Start/End: Original strand, 4772171 - 4772249
Alignment:
Q  432 ttaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactattt 510  Q
    ||||||||| ||| ||||| | ||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  4772171 ttaggtccttttagtttgacaaaattcacaaggtagtcctttaagtttcaaataagttcttttagttgataaactattt 4772249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 430 - 512
Target Start/End: Complemental strand, 4772703 - 4772621
Alignment:
Q  430 aattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttca 512  Q
    |||| |||||| ||| ||||| ||||||  ||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  4772703 aattgggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaataaattcttttagttgataaactatttca 4772621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 1765988 - 1765881
Alignment:
Q  376 gtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaa 475  Q
    ||||||||||||||| |||| | ||| ||||||| |||||| |||||||||| ||| || ||| | ||| ||||| ||||||  ||||||| ||||||||    
T  1765988 gtcattttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtttgacagaatttccaagttactcctttaa 1765889  T
Q  476 gtttcaaa 483  Q
    ||||||||    
T  1765888 gtttcaaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 483
Target Start/End: Complemental strand, 1766044 - 1765941
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||| ||||| |||||| ||||||||||| ||||| |||||||||||  ||||| ||| | ||| ||||| |||| ||||| |||||||||||||| ||    
T  1766044 ttttaatttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagctt 1765945  T
Q  480 caaa 483  Q
    ||||    
T  1765944 caaa 1765941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 513
Target Start/End: Complemental strand, 39302827 - 39302668
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| || ||||||| ||||||||||| |||||| ||||||||||| ||||| ||| ||||||| ||| ||  || | ||| ||| | | |||    
T  39302827 aggccaaataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaactatatcgttttagtttaacaaaat 39302728  T
Q  457 tctcaagttagtccttt---aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    | |||||||| ||||||   | ||||||||||  |  |||||||||||||| ||||||||    
T  39302727 tttcaagttactcctttcaaatgtttcaaatagcttcttttagttgataaattatttcac 39302668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 352 - 427
Target Start/End: Complemental strand, 8903363 - 8903288
Alignment:
Q  352 atttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||| ||||||||||| |||||||||| ||||||||||| | |||| |||||||| || |||||||||| ||||||    
T  8903363 attttaggccaaatactacttttggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtt 8903288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 452 - 514
Target Start/End: Complemental strand, 4030788 - 4030726
Alignment:
Q  452 agaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcacc 514  Q
    |||||| ||||| || ||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  4030788 agaattttcaagctaatcccttaagtttcaaataggtcattttagttggtaaactatttcacc 4030726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 376 - 427
Target Start/End: Complemental strand, 17898848 - 17898797
Alignment:
Q  376 gtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||||||| ||||||||||| |||||| ||||| |||||||||||    
T  17898848 gtcattttagtttgacagaattatcaaattagtcctttaaatttcaaaagtt 17898797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 377 - 423
Target Start/End: Complemental strand, 49651060 - 49651014
Alignment:
Q  377 tcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||||    
T  49651060 tcattttagtttgacagaattctcaagttagtcctttaagtttcaaa 49651014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 474 - 515
Target Start/End: Original strand, 2965542 - 2965583
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccg 515  Q
    |||||| ||||| |||||||||||||||||||||||||||||    
T  2965542 aagttttaaatatgtcattttagttgataaactatttcaccg 2965583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 483
Target Start/End: Original strand, 8902803 - 8902872
Alignment:
Q  414 aagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    ||||||| |||||| |||||| ||| | ||| ||||| | ||||| ||||||||||||||||||||||||    
T  8902803 aagtttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaa 8902872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 427
Target Start/End: Original strand, 8902825 - 8902876
Alignment:
Q  376 gtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||||||||| | ||||  |||||||||| |||||||||||||||||    
T  8902825 gtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtt 8902876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 515
Target Start/End: Original strand, 48352311 - 48352352
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccg 515  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  48352311 aagtttcaaataggttcttttagttgataaactatttcaccg 48352352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 78; Significance: 6e-36; HSPs: 2)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 373 - 513
Target Start/End: Complemental strand, 658 - 509
Alignment:
Q  373 ttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctt 472  Q
    |||||| ||||| |||||||||||| ||||||||||| |||||||||  |||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  658 ttggtccttttaatttgatagaattttcaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctt 559  T
Q  473 t---------aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |         |||||||||||| |||||||||||||||||||||||||||    
T  558 taaatttcaaaagtttcaaataggtcattttagttgataaactatttcac 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 513
Target Start/End: Original strand, 21 - 170
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||| ||||||||||| | |||| ||||||||||| || ||||||||||||||  || ||  |||| ||| |||||  ||||||  ||||||||  |    
T  21 tttggtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaattcctaagttagtatt 120  T
Q  472 tta--------agtttcaaataagtcattttagttgataaactatttcac 513  Q
    | |        ||||||||||| |||||||||||||||||||||||||||    
T  121 taagtttgaaaagtttcaaatatgtcattttagttgataaactatttcac 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 6e-33; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 369 - 513
Target Start/End: Original strand, 35189911 - 35190054
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||| ||||||||| |||||||||||| ||||||||||| |||||||||| ||||||  || |||||| | ||| ||||| |||| || |||||||||    
T  35189911 acttttagtcattttaatttgatagaattctcaagttagtc-tttaagtttcgaaagttttaaataggtcattttagtttgacagaactcccaagttagt 35190009  T
Q  469 cctttaagtttcaaataagtcattttagttgataaactatttcac 513  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||    
T  35190010 cctttaagtttcaaaaagatcattttagttgataaactatttcac 35190054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 369 - 513
Target Start/End: Original strand, 36417883 - 36418027
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    ||||||| || ||||||||| | |||||| ||||||||||| ||||| |||| |||||| ||||||||| || ||  ||||| | |||||||||||||||    
T  36417883 acttttgatccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttagt 36417982  T
Q  469 cctttaagtttcaaataagtcattttagttgataaactatttcac 513  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||    
T  36417983 cctttaagtttcaaataggtccttttagttgataaattatttcac 36418027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 358 - 516
Target Start/End: Original strand, 13538455 - 13538617
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    ||||||| || |||||||||| ||||||||||| | ||||   ||||||||| |||| ||||| |||||| ||||||||||   ||| ||||||||||||    
T  13538455 ggccaaagaccacttttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaatt 13538554  T
Q  458 ctcaagtta---gtccttt-aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
     ||||||||   ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  13538555 ttcaagttattagtccttttaagtttcaaatatgtcattttagttgataaactatttcaccgt 13538617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 361 - 516
Target Start/End: Original strand, 20728517 - 20728681
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| |||||||||| ||||||||||| ||||||  |||||||||| |||||||||| |||| | |||||||||||| ||| ||| | |||||||||    
T  20728517 caaataccacttttggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaacagaattctc 20728616  T
Q  461 aagttagtccttt---------aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||||         |||||||||||| ||| |||||||||| |||||||||||||||    
T  20728617 aagttagtcctttaagttttaaaagtttcaaatatgtctttttagttgaaaaactatttcaccgt 20728681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 357 - 516
Target Start/End: Complemental strand, 36418539 - 36418371
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||  || ||||||| ||||||||||| | |||| ||||||||||| |||| |||||||||||| |||||||||||| ||| ||||| | |||    
T  36418539 aggccaaatatgacgtttggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataat 36418440  T
Q  457 tctcaagttagtcctttaagttt---------caaataagtcattttagttgataaactatttcaccgt 516  Q
    | |||||||||||||||||||||         |||||| ||| ||||||||||||||||||||||||||    
T  36418439 tttcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgt 36418371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 358 - 479
Target Start/End: Original strand, 18951289 - 18951410
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||  || ||||||| ||||||||||| ||||||  |||||||||| |||||||||||||||||  || ||| |||| ||| ||||||||||||    
T  18951289 ggccaaataacacatttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaatt 18951388  T
Q  458 ctcaagttagtcctttaagttt 479  Q
    ||||||||||||||||||||||    
T  18951389 ctcaagttagtcctttaagttt 18951410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 369 - 514
Target Start/End: Complemental strand, 5735107 - 5734954
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||| ||||| |||||||||||| ||||| ||||||||||||||||| |||| ||| ||  ||||| ||||| ||| ||| | |||||||||||||||||    
T  5735107 acttatggtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctcaagttagt 5735008  T
Q  469 ccttta--------agtttcaaataagtcattttagttgataaactatttcacc 514  Q
    ||||||        ||||||||||| ||||||||||||||||||||||||||||    
T  5735007 cctttaagttcaaaagtttcaaataggtcattttagttgataaactatttcacc 5734954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 516
Target Start/End: Complemental strand, 38405670 - 38405518
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| | ||||| || ||||||||| | ||||||  ||||||| ||||||||||||| |||||| |||||| ||| | ||| ||||  |||||||||    
T  38405670 caaataccatttttgatccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtttggcagaattctc 38405571  T
Q  461 aagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||   |||||||||||||| ||||| ||| ||||||||||||||||||||||||||    
T  38405570 aa---agtcctttaagttttaaatatgtccttttagttgataaactatttcaccgt 38405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 372 - 516
Target Start/End: Complemental strand, 35190536 - 35190393
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||| ||||| ||||| |||||| |||||||| |  |||||||||  |||||| |||||||||||| ||| ||||| | ||||||||| || ||| |    
T  35190536 tttggtccttttaatttgacagaattttcaagttacttctttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctcaaatttgtctt 35190437  T
Q  472 ttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||||||||| |||  ||| ||||||||||||||||||||||||||    
T  35190436 ttaagtttc-aattggtctttttagttgataaactatttcaccgt 35190393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 411 - 569
Target Start/End: Complemental strand, 6336412 - 6336245
Alignment:
Q  411 tttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaa---------gtttcaaataagtcattttagttgat 501  Q
    |||||||||| |||||| ||||||| | || ||||||||  |||||||  |||||||||||||||         |||||||||| ||| ||| |||||||    
T  6336412 tttaagtttcgaaagtttcaattagattcttttaatttgtcagaattcctaagttagtcctttaaatttcaaatgtttcaaatatgtcctttcagttgat 6336313  T
Q  502 aaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaatttttgaaactt 569  Q
    ||||||||||||||||| ||||| ||| |||||||||| || ||||  |||||||| |||||||||||    
T  6336312 aaactatttcaccgtcaccgttttaaaagtttcaaataggtcctttatgtttgaaacttttgaaactt 6336245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 356 - 473
Target Start/End: Original strand, 14235552 - 14235669
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    |||||||||||  | |||||||| ||||||||||| | |||| | ||||||||| ||||||||  |||||||  ||||||||||| ||| ||||| ||||    
T  14235552 aaggccaaatatcatttttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtttgacagaa 14235651  T
Q  456 ttctcaagttagtccttt 473  Q
    ||||||||||||||||||    
T  14235652 ttctcaagttagtccttt 14235669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 483
Target Start/End: Original strand, 18248942 - 18249069
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaa 455  Q
    |||| ||||||| |||||||||| |||||||||||||||||| | |||||| || |||| ||||  ||||||  || || ||||| ||| ||| | ||||    
T  18248942 aaggtcaaataccacttttggtccttttagtttgatagaatttttaagttaatcttttacgttttgaaagttttaactatgtccttttagtttaacagaa 18249041  T
Q  456 ttctcaagttagtcctttaagtttcaaa 483  Q
    |||||||||||||| |||||||||||||    
T  18249042 ttctcaagttagtcatttaagtttcaaa 18249069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 32660267 - 32660370
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||| | | |||| ||||||||||| ||||||||||||||||| ||| |||||| | ||| ||||| |||||||  |||||||||||||||||||    
T  32660267 ttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagttt 32660366  T
Q  480 caaa 483  Q
    ||||    
T  32660367 caaa 32660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 362 - 483
Target Start/End: Original strand, 6336133 - 6336254
Alignment:
Q  362 aaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||| | ||| |||| ||||||||||  ||||||  |||||||||| |||||||||||||||||  || |||||| | ||| ||||| ||||||  ||    
T  6336133 aaataccattttcggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttcca 6336232  T
Q  462 agttagtcctttaagtttcaaa 483  Q
    ||||||||||||||||||||||    
T  6336233 agttagtcctttaagtttcaaa 6336254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 380 - 512
Target Start/End: Original strand, 26275512 - 26275644
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||||||||| ||||||   ||||||||  ||||||||||||||||| ||| ||| || | ||| |||||  |||||| |||||||||| || ||||||    
T  26275512 ttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattcccaagttagtcattcaagttt 26275611  T
Q  480 caaataagtcattttagttgataaactatttca 512  Q
    |||||| ||  |||||||||| |||||||||||    
T  26275612 caaataggttcttttagttgacaaactatttca 26275644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 380 - 461
Target Start/End: Original strand, 18951371 - 18951452
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctca 461  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||  || |||||| | ||| ||||||||||||||||    
T  18951371 ttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtttgatagaattctca 18951452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 452 - 513
Target Start/End: Original strand, 38082636 - 38082697
Alignment:
Q  452 agaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||||||    
T  38082636 agaattctcaagttagtcttttaaattttaaataggtcattttagttgataaactatttcac 38082697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 516
Target Start/End: Complemental strand, 26276035 - 26275979
Alignment:
Q  460 caagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  26276035 caagttagtcctttaagtttcaaatatgtccttttagttgataagctatttcaccgt 26275979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 483
Target Start/End: Original strand, 30737748 - 30737851
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||| ||||| |||||| |||||||| |||||||| |||| |||||| |||||| ||| | ||| ||||| | ||||||||| |||||| |||||||||    
T  30737748 ttttaatttgacagaattctcaagttaatcatttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtcttttaagttt 30737847  T
Q  480 caaa 483  Q
    ||||    
T  30737848 caaa 30737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 352 - 427
Target Start/End: Complemental strand, 35891345 - 35891270
Alignment:
Q  352 atttaaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||| |||| |||||||||||||| || ||||||||||| | |||| ||||||||||| |||||||||||||||||    
T  35891345 atttcaggctaaatacaacttttgatccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtt 35891270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 369 - 483
Target Start/End: Original strand, 32660196 - 32660310
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||||||| ||||||||| | | ||||   |||||| || |||||||||| |||||| |||||| || || ||| ||| | | |||||||||||||||    
T  32660196 acttttggtctttttagttttacataatttctaagttaatcctttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagttagt 32660295  T
Q  469 cctttaagtttcaaa 483  Q
    |||||||||||||||    
T  32660296 cctttaagtttcaaa 32660310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 491 - 569
Target Start/End: Complemental strand, 32660439 - 32660361
Alignment:
Q  491 ttttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaatttttgaaactt 569  Q
    ||||||||||||||||||||||  |||| ||||| ||| |||||||||| || | |||||||||||| |||||||||||    
T  32660439 ttttagttgataaactatttcagtgtcaccgttttaaaagtttcaaataagtccatttagtttgaaacttttgaaactt 32660361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 483
Target Start/End: Original strand, 1722486 - 1722611
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    |||||||||| |  ||||||| ||||||||| | | ||||  |||||||||| ||||| |||||||||||  || ||| | || ||| ||||| | ||||    
T  1722486 ggccaaataccatgtttggtccttttagtttaacaaaattcacaagttagtcctttaattttcaaaagttttaaatagattcttttagtttgacataatt 1722585  T
Q  458 ctcaagttagtcctttaagtttcaaa 483  Q
    ||||||||| ||||||||||||||||    
T  1722586 ctcaagttaatcctttaagtttcaaa 1722611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 513
Target Start/End: Original strand, 19278702 - 19278854
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    ||||||| || ||||||||||| |||||| | ||||||||| ||||| |||||||| ||  |||||| | || ||| ||||| |||||||||||||||      
T  19278702 acttttgatccttttagtttgacagaattcttaagttagtcctttaaatttcaaaa-ttttaattagcttcttttagtttgacagaattctcaagttacc 19278800  T
Q  469 cctttaag---------tttcaaataagtcattttagttgataaactatttcac 513  Q
     |||||||         |||||||||| ||||||||||||||||||||||||||    
T  19278801 tctttaagtttcaataatttcaaataaatcattttagttgataaactatttcac 19278854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 358 - 516
Target Start/End: Original strand, 13543070 - 13543240
Alignment:
Q  358 ggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaatt 457  Q
    ||||||| || |||||||||| ||||||||||| | ||||   |||||| |  |||||||||| |||||| |||||||||| | ||| |||||| |||||    
T  13543070 ggccaaagaccacttttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatt 13543169  T
Q  458 ctcaag---ttagtccttt---------aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
      ||||   ||||||||||         |||||||||||| |||||||||||||||||| |||||||||||    
T  13543170 tccaagttattagtcctttaagtttcaaaagtttcaaatatgtcattttagttgataaattatttcaccgt 13543240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 380 - 516
Target Start/End: Complemental strand, 30738374 - 30738228
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttt------ 473  Q
    ||||||||||| ||||||   ||||||||  |||||||||| ||| ||  ||||||||| | ||||||||| |||||||||||||| |||||||          
T  30738374 ttttagtttgacagaatttcgaagttagtattttaagtttcgaaatttt-aattaggtcattttaatttgacagaattctcaagtttgtcctttatgttt 30738276  T
Q  474 ---aagtttcaaataagtcattttagt--tgataaactatttcaccgt 516  Q
       |||||||||||| |||||||||||  |||||||||||||||||||    
T  30738275 caaaagtttcaaatatgtcattttagttgtgataaactatttcaccgt 30738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 514
Target Start/End: Complemental strand, 20729159 - 20729017
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcct 471  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||| ||| |||         ||| |||| ||| ||||| |||||| |||||||||||||    
T  20729159 tttggtccttttagtttgataaaattatcaagttagtcctttaaattttaaa---------tagatccttttagtttgacagaattttcaagttagtcct 20729069  T
Q  472 ttaa---------gtttcaaataagtcattttagttgataaactatttcacc 514  Q
    ||||         |||||||||| ||| ||||||||||||||||||||||||    
T  20729068 ttaaattttaaaagtttcaaataggtccttttagttgataaactatttcacc 20729017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 356 - 423
Target Start/End: Complemental strand, 31814022 - 31813955
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    |||| ||||||| || ||||||| ||||||||||| ||||||  ||||||||||||||||||||||||    
T  31814022 aaggtcaaataccacgtttggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaa 31813955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 516
Target Start/End: Original strand, 5734573 - 5734615
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  5734573 aagtttcaaataagtcattttagttaataaactatttcaccgt 5734615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 427
Target Start/End: Original strand, 6336206 - 6336258
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||||||||||||| ||||||  |||||||||| |||||||||||||||||    
T  6336206 ggtcattttagtttgaaagaatttccaagttagtcctttaagtttcaaaagtt 6336258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 371 - 427
Target Start/End: Original strand, 32459426 - 32459482
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||||| ||||||||||| | ||||  ||||||||||||||||||||||||||||    
T  32459426 ttttggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagtt 32459482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 18249026 - 18249073
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||||    
T  18249026 ttttagtttaacagaattctcaagttagtcatttaagtttcaaaagtt 18249073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 483
Target Start/End: Complemental strand, 13543741 - 13543615
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| ||||||  || ||||||||||| |||||| |||| |||||  ||||| |||||||||||   |  || |||| ||| ||||  |||||    
T  13543741 aggccaaataccacttttactctttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtttggaagaat 13543642  T
Q  457 tctcaagttagtcctttaagtttcaaa 483  Q
    ||| |||||| |||||||| |||||||    
T  13543641 tcttaagttaatcctttaaatttcaaa 13543615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 423
Target Start/End: Complemental strand, 26276078 - 26276012
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    ||||||||||| ||||||| || ||||||||||| | ||||  |||||||||| |||||||||||||    
T  26276078 aggccaaataccacttttgatccttttagtttgacaaaatttccaagttagtcctttaagtttcaaa 26276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 516
Target Start/End: Original strand, 38405144 - 38405189
Alignment:
Q  471 tttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||||    
T  38405144 tttaagtttcaaatatgtcattttagttgataaactgttttaccgt 38405189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 435 - 483
Target Start/End: Original strand, 18951306 - 18951354
Alignment:
Q  435 ggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    |||||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  18951306 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaa 18951354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 375 - 427
Target Start/End: Original strand, 32660322 - 32660374
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||||||||||||| ||||||   ||||||||| |||||||||||||||||    
T  32660322 ggtcattttagtttgacagaattcctaagttagtcctttaagtttcaaaagtt 32660374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 513
Target Start/End: Original strand, 32459478 - 32459517
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  32459478 aagttttaaataggtcattttagttgataaactatttcac 32459517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 474 - 516
Target Start/End: Complemental strand, 18238351 - 18238309
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||| ||||| |||||||||||||||||| |||||||||||    
T  18238351 aagttttaaataggtcattttagttgataaattatttcaccgt 18238309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 435 - 485
Target Start/End: Complemental strand, 31814003 - 31813953
Alignment:
Q  435 ggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaata 485  Q
    |||||| ||| ||||| ||||||| |||||||||| |||||||||||||||    
T  31814003 ggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaata 31813953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 475 - 521
Target Start/End: Original strand, 35890878 - 35890924
Alignment:
Q  475 agtttcaaataagtcattttagttgataaactatttcaccgtcatcg 521  Q
    ||||||| |||  ||||||||||||||||||||||||||||| ||||    
T  35890878 agtttcagatagctcattttagttgataaactatttcaccgttatcg 35890924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 369 - 419
Target Start/End: Original strand, 40744971 - 40745021
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagttt 419  Q
    ||||||| || |||||||||||||||||| |||||||| || |||||||||    
T  40744971 acttttgctccttttagtttgatagaattttcaagttaatcttttaagttt 40745021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 422 - 475
Target Start/End: Complemental strand, 18321287 - 18321234
Alignment:
Q  422 aaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaa 475  Q
    |||||| ||||||||| || ||||||||| |||||| | |||||||||||||||    
T  18321287 aaagtttcaattaggttcttttaatttgacagaatttttaagttagtcctttaa 18321234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 70; Significance: 4e-31; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 373 - 513
Target Start/End: Original strand, 28545 - 28694
Alignment:
Q  373 ttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctt 472  Q
    |||||| ||||| ||||| ||||||  |||||||||| |||||||||  |||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  28545 ttggtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctt 28644  T
Q  473 t---------aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |         |||||||||||| |||||||||||||||||||||||||||    
T  28645 taaaattcaaaagtttcaaataggtcattttagttgataaactatttcac 28694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 513
Target Start/End: Complemental strand, 29084 - 29033
Alignment:
Q  461 aagttagtcctttaagtttcaaataagtcattttagttgataaactatttcac 513  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  29084 aagttagtc-tttaagtttcaaatatgtcattttagttgataaattatttcac 29033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 68; Significance: 6e-30; HSPs: 5)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 357 - 480
Target Start/End: Complemental strand, 124496 - 124373
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||| |||||||||| |||| |||||||| ||||  |||||||||| |||||||||| |||||| |||||||||||| ||| ||||| |||||    
T  124496 aggccaaataccacttttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaat 124397  T
Q  457 tctcaagttagtcctttaagtttc 480  Q
    |  |||||||||||||||||||||    
T  124396 ttccaagttagtcctttaagtttc 124373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 361 - 483
Target Start/End: Original strand, 124132 - 124253
Alignment:
Q  361 caaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctc 460  Q
    ||||||| |||||||||| ||||||||||| | ||||  |||||||||| ||||||||||||||||| |||  |||| || ||| ||||| ||||||| |    
T  124132 caaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattccc 124231  T
Q  461 aagttagtcctttaagtttcaaa 483  Q
    || ||||| ||||||||||||||    
T  124232 aatttagt-ctttaagtttcaaa 124253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 375 - 478
Target Start/End: Complemental strand, 124418 - 124315
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtccttta 474  Q
    |||| ||||||||||| ||||||  |||||||||| |||||||||| |||||| |||||||||| | ||| ||||| ||||||| |||||| |||||||     
T  124418 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaattcccaagttggtcctttt 124319  T
Q  475 agtt 478  Q
    ||||    
T  124318 agtt 124315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 491 - 569
Target Start/End: Complemental strand, 124322 - 124244
Alignment:
Q  491 ttttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaatttttgaaactt 569  Q
    |||||||||||||||||||||||| ||| |||||||||  ||||||||| ||  ||||||||||||| |||||||||||    
T  124322 ttttagttgataaactatttcaccatcaccgtttcaaaaatttcaaataggtcattttagtttgaaacttttgaaactt 124244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 609
Target Start/End: Complemental strand, 124173 - 124135
Alignment:
Q  571 ttgggaattttgtcaaactaaaaggaccaaaagttgtat 609  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  124173 ttgggaattttgtcaaactaaaaggaccaaaagtggtat 124135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 1e-27; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 474 - 569
Target Start/End: Original strand, 54456722 - 54456817
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagtttgaaatttttgaaactt 569  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||||| ||  ||||||||||||| |||||||||||    
T  54456722 aagtttcaaatatgtcattttagttgataaactaattcaccgtcaccgtttcaaaagtttcaaataagtctttttagtttgaaacttttgaaactt 54456817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 357 - 483
Target Start/End: Complemental strand, 31247783 - 31247657
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaat 456  Q
    ||||||||||  |||||||||| ||||| ||||| ||||||  |||||||||| |||||||||| |||||| |||||||||||| ||| || || |||||    
T  31247783 aggccaaatatcacttttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacagaat 31247684  T
Q  457 tctcaagttagtcctttaagtttcaaa 483  Q
    || ||||||||| ||||||||||||||    
T  31247683 tcccaagttagtgctttaagtttcaaa 31247657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 371 - 513
Target Start/End: Original strand, 50530245 - 50530386
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    ||||| || ||||||||||| |||||| |||| |||||| ||||||||||||||||   ||||||||| | ||| ||||| ||||||||||| || ||||    
T  50530245 ttttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacagaattctcaaatttgtcc 50530344  T
Q  471 tttaagtttcaaataagtcattttagttgataaactatttcac 513  Q
     |||||||| ||||| ||||||||| |||||||||||||||||    
T  50530345 -ttaagttttaaataggtcattttaattgataaactatttcac 50530386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 371 - 516
Target Start/End: Complemental strand, 3088218 - 3088073
Alignment:
Q  371 ttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    |||||||| ||||||||||| |||||| |||||||| |  ||||| |||| |||||| |||||| ||||| ||| ||||| |  |||  | |||||||||    
T  3088218 ttttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgacatgatttcctagttagtcc 3088119  T
Q  471 tttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  3088118 tttaagtttcaaataggtccttttaattgataaactatttcaccgt 3088073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 423 - 515
Target Start/End: Complemental strand, 4276689 - 4276597
Alignment:
Q  423 aagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccg 515  Q
    ||||| ||||||| || | ||| ||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  4276689 aagtttcaattagatcattttagtttgacagaattcccaagttagtcctttaagtttcaaatagatcattttagttgataaactatttcaccg 4276597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 454 - 557
Target Start/End: Original strand, 5505595 - 5505698
Alignment:
Q  454 aattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtttcaaatgtttcaaatatgttcttttagttt 553  Q
    |||| |||||||| || |||| |||| ||| | |||||||||||||||||| | ||||||| ||||||||| ||| |||||||||| |||||||||||||    
T  5505595 aattttcaagttactcatttaggttttaaaaaggtcattttagttgataaattttttcaccatcatcgtttaaaaagtttcaaataagttcttttagttt 5505694  T
Q  554 gaaa 557  Q
    ||||    
T  5505695 gaaa 5505698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 435 - 516
Target Start/End: Original strand, 14629288 - 14629369
Alignment:
Q  435 ggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||| ||| ||||| ||||||| |||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||    
T  14629288 ggtccttttactttgacagaattcccaagttagtcctttaagtttcaaataggttcttttagttgataaattatttcaccgt 14629369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 454 - 523
Target Start/End: Complemental strand, 35556016 - 35555947
Alignment:
Q  454 aattctcaagttagtcctttaagtttcaaataagtcattttagttgataaactatttcaccgtcatcgtt 523  Q
    ||||| ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  35556016 aattcccaagttaatcctttaagtttcaaataggtcattttagttaataaactatttcaccgttatcgtt 35555947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 516
Target Start/End: Original strand, 35555526 - 35555680
Alignment:
Q  372 tttggtcattttagtttgatagaattatcaagttag-tcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcc 470  Q
    ||||||| |||||  |||| ||||||  |||||||| || ||||||||||||||||| ||||||  || | ||| ||||| |||||| ||||||||||||    
T  35555526 tttggtccttttaaattgacagaattcacaagttagatcttttaagtttcaaaagtttcaattaaatcattttagtttgacagaattatcaagttagtcc 35555625  T
Q  471 tttaa---------gtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
     ||||         ||||||||||| |||||||||||||||||||||||||||||    
T  35555626 attaaattttgaaagtttcaaataaatcattttagttgataaactatttcaccgt 35555680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 483
Target Start/End: Complemental strand, 54456911 - 54456808
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    |||||||||||||||| |  ||| ||| ||  |||||| ||||||||| ||| |||||||| ||||||||| | ||||  ||||||||||||||||||||    
T  54456911 ttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatttgacataatttccaagttagtcctttaagttt 54456812  T
Q  480 caaa 483  Q
    ||||    
T  54456811 caaa 54456808  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 380 - 481
Target Start/End: Original strand, 3087090 - 3087190
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagttt 479  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||  || ||  |||| ||| ||||| ||||||||||||| | || ||||| |||    
T  3087090 ttttaatttgatagaattttcaagttagtc-tttaagtttcaaaagttttaaataaatccttttagtttgacagaattctcaagtaaatcttttaaattt 3087188  T
Q  480 ca 481  Q
    ||    
T  3087189 ca 3087190  T

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Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 516
Target Start/End: Original strand, 21376595 - 21376719
Alignment:
Q  401 aagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa---------taagtcat 491  Q
    ||||||| | ||||| ||| |||||||  ||||| || || ||| |||||||||||| ||| ||| |||||||||||||||||         || |||||    
T  21376595 aagttagacttttaaattttaaaagttttaattaagttcttttagtttgatagaattttcaggttggtcctttaagtttcaaaagttttaaatatgtcat 21376694  T
Q  492 tttagttgataaactatttcaccgt 516  Q
    |||||||||||||||||||||||||    
T  21376695 tttagttgataaactatttcaccgt 21376719  T

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Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 516
Target Start/End: Complemental strand, 21377038 - 21376990
Alignment:
Q  468 tcctttaagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  21377038 tcctttaagtttcaaataggtccttttagtttataaactatttcaccgt 21376990  T

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Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 463 - 514
Target Start/End: Complemental strand, 33975120 - 33975069
Alignment:
Q  463 gttagtcctttaagtttcaaataagtcattttagttgataaactatttcacc 514  Q
    ||||||||||||||||||||||| ||  |||||||||||||| |||||||||    
T  33975120 gttagtcctttaagtttcaaataggttcttttagttgataaattatttcacc 33975069  T

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Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 423
Target Start/End: Original strand, 14629270 - 14629336
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    ||||||||||| || ||||||| ||||| ||||| ||||||  |||||||||| |||||||||||||    
T  14629270 aggccaaatactacgtttggtccttttactttgacagaattcccaagttagtcctttaagtttcaaa 14629336  T

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Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 616 - 675
Target Start/End: Complemental strand, 36902440 - 36902385
Alignment:
Q  616 aaaatttaaaatataatgatacttataaagttattgataattgattagtgaatttcattt 675  Q
    |||| ||||||||||||||||    |||||||||||||| ||||||||||||||||||||    
T  36902440 aaaaattaaaatataatgata----taaagttattgatagttgattagtgaatttcattt 36902385  T

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Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 483
Target Start/End: Original strand, 3087086 - 3087132
Alignment:
Q  436 gtcctcttaatttgatagaattctcaagttagtcctttaagtttcaaa 483  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  3087086 gtccttttaatttgatagaattttcaagttagt-ctttaagtttcaaa 3087132  T

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Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 474 - 513
Target Start/End: Original strand, 4276246 - 4276285
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  4276246 aagtttcaaatagttcattttagttgataaactatttcac 4276285  T

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Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 423
Target Start/End: Original strand, 14964741 - 14964784
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||    
T  14964741 ttttagtttgacagaattttcaagttagtcttttaagtttcaaa 14964784  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 21376634 - 21376681
Alignment:
Q  380 ttttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    |||||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  21376634 ttttagtttgatagaattttcaggttggtcctttaagtttcaaaagtt 21376681  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 369 - 483
Target Start/End: Original strand, 4276132 - 4276246
Alignment:
Q  369 acttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaagttagt 468  Q
    |||||||||| ||||||||||| |  ||| | ||||||||  |||||||||  |||||| |||||| ||| | ||| ||||| | |||| | | ||||||    
T  4276132 acttttggtccttttagtttgacaatatttttaagttagttctttaagttttgaaagtttcaattaagtctttttagtttgacataatttttatgttagt 4276231  T
Q  469 cctttaagtttcaaa 483  Q
     ||||||||||||||    
T  4276232 tctttaagtttcaaa 4276246  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 377 - 423
Target Start/End: Complemental strand, 4276675 - 4276629
Alignment:
Q  377 tcattttagtttgatagaattatcaagttagtcatttaagtttcaaa 423  Q
    |||||||||||||| ||||||  |||||||||| |||||||||||||    
T  4276675 tcattttagtttgacagaattcccaagttagtcctttaagtttcaaa 4276629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 18745564 - 18745502
Alignment:
Q  357 aggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagttt 419  Q
    ||||||||||||| |||||||| ||| | ||||||| ||||||||| |||||  |||||||||    
T  18745564 aggccaaatacaatttttggtcctttaaatttgataaaattatcaaattagtactttaagttt 18745502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 604
Target Start/End: Original strand, 35556008 - 35556041
Alignment:
Q  571 ttgggaattttgtcaaactaaaaggaccaaaagt 604  Q
    |||||||||||| |||||||||||||||||||||    
T  35556008 ttgggaattttgccaaactaaaaggaccaaaagt 35556041  T

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Target: scaffold0041 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 479
Target Start/End: Complemental strand, 45343 - 45220
Alignment:
Q  355 taaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgataga 454  Q
    ||||| ||||||| ||||| |||| |||| |||||| | |||| ||||||||||| ||||||||| ||||||| |||||||||||| ||| ||||| | |    
T  45343 taaggtcaaataccacttt-ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacata 45245  T
Q  455 attctcaagttagtcctttaagttt 479  Q
    ||| |||| |||||| |||||||||    
T  45244 attttcaaattagtcatttaagttt 45220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 375 - 462
Target Start/End: Complemental strand, 45264 - 45177
Alignment:
Q  375 ggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagttacaattaggtcctcttaatttgatagaattctcaa 462  Q
    |||| ||||||||||| | |||| |||| |||||||||||||||| ||||||| ||| ||| |||| ||||||||| |||||||||||    
T  45264 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattctcaa 45177  T

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Target: scaffold0374 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 4)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 356 - 428
Target Start/End: Original strand, 16057 - 16129
Alignment:
Q  356 aaggccaaatacaacttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtta 428  Q
    |||||||||||| ||||||| |||||||||||| | | |||| | ||||||||| ||||||||||||||||||    
T  16057 aaggccaaataccacttttgatcattttagtttcacaaaattcttaagttagtcttttaagtttcaaaagtta 16129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 474 - 513
Target Start/End: Complemental strand, 16620 - 16581
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcac 513  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  16620 aagttttaaataagtcattttagttgataaactatttcac 16581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 516
Target Start/End: Original strand, 16224 - 16266
Alignment:
Q  474 aagtttcaaataagtcattttagttgataaactatttcaccgt 516  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  16224 aagttttaaataggtcattttagttgataaactatttcaccgt 16266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 16171 - 16228
Alignment:
Q  370 cttttggtcattttagtttgatagaattatcaagttagtcatttaagtttcaaaagtt 427  Q
    ||||||||| ||||||||||||| ||||  ||| |||||| ||||||||| |||||||    
T  16171 cttttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagtt 16228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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