View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5588_high_11 (Length: 283)

Name: NF5588_high_11
Description: NF5588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5588_high_11
NF5588_high_11
[»] chr7 (68 HSPs)
chr7 (34-146)||(28218426-28218538)
chr7 (31-146)||(28218181-28218297)
chr7 (34-146)||(41600221-41600333)
chr7 (31-146)||(20419539-20419654)
chr7 (31-146)||(23704921-23705035)
chr7 (34-146)||(12006803-12006915)
chr7 (34-146)||(48672542-48672654)
chr7 (31-146)||(12006544-12006658)
chr7 (34-146)||(23704665-23704776)
chr7 (34-146)||(20419799-20419912)
chr7 (34-146)||(20458954-20459065)
chr7 (34-146)||(25772594-25772706)
chr7 (31-146)||(38879726-38879842)
chr7 (31-146)||(16995203-16995317)
chr7 (31-146)||(20458695-20458809)
chr7 (37-146)||(20963760-20963868)
chr7 (34-146)||(23383763-23383875)
chr7 (34-145)||(1250469-1250580)
chr7 (31-146)||(41599961-41600076)
chr7 (31-146)||(10409634-10409748)
chr7 (34-146)||(38879987-38880096)
chr7 (31-146)||(44816834-44816953)
chr7 (31-146)||(25772367-25772481)
chr7 (31-146)||(48672280-48672397)
chr7 (34-146)||(6465858-6465969)
chr7 (31-146)||(20963497-20963613)
chr7 (1-71)||(23704843-23704915)
chr7 (31-146)||(48648265-48648379)
chr7 (37-150)||(7657968-7658083)
chr7 (1-71)||(20458815-20458887)
chr7 (31-146)||(23383502-23383618)
chr7 (1-71)||(44816959-44817031)
chr7 (31-117)||(24195056-24195142)
chr7 (4-71)||(20963622-20963691)
chr7 (38-146)||(7658236-7658340)
chr7 (1-71)||(20419660-20419732)
chr7 (1-71)||(25772487-25772559)
chr7 (1-71)||(41600082-41600154)
chr7 (1-67)||(12006664-12006732)
chr7 (97-146)||(24195198-24195247)
chr7 (1-71)||(48648385-48648457)
chr7 (1-70)||(31851363-31851434)
chr7 (33-144)||(33131638-33131749)
chr7 (34-146)||(48648492-48648602)
chr7 (38-80)||(31851506-31851548)
chr7 (98-144)||(31852157-31852203)
chr7 (1-71)||(10409556-10409628)
chr7 (1-71)||(23383624-23383696)
chr7 (35-83)||(24194929-24194978)
chr7 (97-146)||(33162862-33162911)
chr7 (1-71)||(48672403-48672475)
chr7 (35-83)||(10409440-10409488)
chr7 (33-128)||(14800918-14801013)
chr7 (33-128)||(15247910-15248005)
chr7 (33-126)||(14630359-14630450)
chr7 (93-136)||(14646972-14647015)
chr7 (93-144)||(23258246-23258297)
chr7 (1-64)||(38879848-38879913)
chr7 (42-122)||(7842467-7842546)
chr7 (30-71)||(24194973-24195014)
chr7 (1-71)||(33162717-33162789)
chr7 (31-82)||(1250273-1250324)
chr7 (32-71)||(28218320-28218359)
chr7 (53-146)||(6466087-6466180)
chr7 (93-146)||(31851244-31851297)
chr7 (30-70)||(6466037-6466077)
chr7 (24-64)||(7658119-7658159)
chr7 (34-78)||(44817098-44817142)
[»] chr5 (58 HSPs)
chr5 (30-146)||(23979160-23979276)
chr5 (30-155)||(14143896-14144020)
chr5 (31-146)||(24837172-24837287)
chr5 (35-146)||(31799643-31799754)
chr5 (34-146)||(14411700-14411812)
chr5 (31-146)||(17762542-17762657)
chr5 (35-146)||(18336720-18336830)
chr5 (34-146)||(7126180-7126292)
chr5 (34-146)||(24837432-24837544)
chr5 (30-146)||(6817126-6817241)
chr5 (34-146)||(17762286-17762397)
chr5 (34-146)||(41001616-41001727)
chr5 (35-144)||(14144165-14144274)
chr5 (35-144)||(7125923-7126031)
chr5 (34-146)||(24074306-24074418)
chr5 (35-144)||(29445070-29445178)
chr5 (31-146)||(4918992-4919108)
chr5 (34-145)||(31799903-31800013)
chr5 (28-146)||(994003-994120)
chr5 (31-146)||(30512291-30512405)
chr5 (31-146)||(30552631-30552745)
chr5 (34-146)||(18336470-18336583)
chr5 (34-146)||(24650962-24651074)
chr5 (31-146)||(993753-993865)
chr5 (34-146)||(4919253-4919364)
chr5 (35-144)||(27158996-27159104)
chr5 (31-135)||(41001370-41001471)
chr5 (31-146)||(14411926-14412040)
chr5 (34-145)||(29444810-29444921)
chr5 (35-144)||(27159221-27159327)
chr5 (37-144)||(20709478-20709584)
chr5 (30-136)||(22571090-22571196)
chr5 (39-146)||(24650705-24650810)
chr5 (1-71)||(7126041-7126113)
chr5 (30-83)||(20709278-20709331)
chr5 (30-118)||(24074561-24074649)
chr5 (1-71)||(24837293-24837365)
chr5 (24-71)||(18336638-18336685)
chr5 (20-71)||(24650845-24650896)
chr5 (3-71)||(41001479-41001549)
chr5 (30-144)||(41424521-41424635)
chr5 (38-82)||(6817388-6817432)
chr5 (1-70)||(20709336-20709407)
chr5 (20-71)||(14144083-14144134)
chr5 (1-71)||(14411847-14411920)
chr5 (18-68)||(24074487-24074537)
chr5 (1-71)||(993871-993942)
chr5 (1-67)||(4919114-4919182)
chr5 (1-67)||(6817246-6817314)
chr5 (1-71)||(17762464-17762536)
chr5 (1-71)||(31799764-31799836)
chr5 (38-82)||(20959358-20959402)
chr5 (33-81)||(32233967-32234015)
chr5 (1-71)||(27159114-27159185)
chr5 (33-81)||(28070532-28070580)
chr5 (33-80)||(28071759-28071806)
chr5 (98-144)||(28071825-28071871)
chr5 (25-66)||(20947056-20947097)
[»] chr3 (79 HSPs)
chr3 (31-146)||(9266978-9267093)
chr3 (37-146)||(14171852-14171961)
chr3 (31-146)||(35995681-35995796)
chr3 (34-146)||(14262299-14262411)
chr3 (38-146)||(45969918-45970026)
chr3 (35-146)||(16721994-16722105)
chr3 (35-146)||(16722255-16722366)
chr3 (35-144)||(14262041-14262150)
chr3 (35-144)||(14162135-14162243)
chr3 (34-146)||(19113028-19113140)
chr3 (34-146)||(33372409-33372521)
chr3 (34-146)||(43572392-43572504)
chr3 (31-146)||(21633156-21633271)
chr3 (35-144)||(5800869-5800977)
chr3 (34-146)||(5800608-5800720)
chr3 (35-146)||(19112767-19112879)
chr3 (34-146)||(20853959-20854070)
chr3 (34-146)||(30500304-30500415)
chr3 (36-146)||(33372669-33372779)
chr3 (37-146)||(11003735-11003844)
chr3 (49-146)||(19720336-19720433)
chr3 (35-144)||(30500048-30500155)
chr3 (38-146)||(49986530-49986639)
chr3 (34-146)||(14161874-14161986)
chr3 (31-146)||(20853698-20853814)
chr3 (34-146)||(45003499-45003611)
chr3 (39-146)||(45970183-45970291)
chr3 (34-146)||(52552951-52553063)
chr3 (34-146)||(9267238-9267349)
chr3 (30-146)||(43572650-43572765)
chr3 (30-146)||(4204712-4204827)
chr3 (93-157)||(27946187-27946251)
chr3 (31-146)||(14171590-14171704)
chr3 (28-146)||(17649267-17649384)
chr3 (34-146)||(21632904-21633011)
chr3 (35-146)||(35995942-35996050)
chr3 (31-135)||(45003756-45003859)
chr3 (33-137)||(36990922-36991025)
chr3 (33-137)||(37016362-37016465)
chr3 (1-71)||(49986710-49986782)
chr3 (31-146)||(49986788-49986903)
chr3 (35-144)||(15328724-15328834)
chr3 (3-71)||(16722173-16722243)
chr3 (93-144)||(27946114-27946165)
chr3 (1-68)||(17465492-17465561)
chr3 (33-137)||(35740829-35740931)
chr3 (34-146)||(17465630-17465742)
chr3 (1-71)||(19112889-19112961)
chr3 (1-75)||(35995802-35995878)
chr3 (34-146)||(38283553-38283665)
chr3 (1-75)||(38283728-38283804)
chr3 (35-144)||(52552695-52552806)
chr3 (33-144)||(35741847-35741957)
chr3 (6-75)||(47575401-47575472)
chr3 (6-70)||(14262165-14262231)
chr3 (1-71)||(9267099-9267171)
chr3 (1-71)||(14171710-14171782)
chr3 (31-146)||(17465370-17465486)
chr3 (1-67)||(20853820-20853888)
chr3 (1-71)||(21633078-21633150)
chr3 (1-71)||(45970097-45970169)
chr3 (96-144)||(3425973-3426021)
chr3 (30-82)||(38283809-38283861)
chr3 (1-70)||(45003679-45003750)
chr3 (93-144)||(3424779-3424830)
chr3 (20-71)||(14162053-14162104)
chr3 (1-67)||(4204832-4204900)
chr3 (34-146)||(15328466-15328575)
chr3 (18-71)||(15328642-15328695)
chr3 (1-71)||(30500165-30500237)
chr3 (94-146)||(24490242-24490294)
chr3 (34-136)||(32998397-32998497)
chr3 (35-83)||(45058755-45058803)
chr3 (6-71)||(52552821-52552888)
chr3 (20-71)||(5800787-5800838)
chr3 (1-67)||(33372592-33372659)
chr3 (24-71)||(43572573-43572620)
chr3 (34-76)||(1068912-1068954)
chr3 (38-146)||(47575539-47575646)
[»] chr8 (59 HSPs)
chr8 (34-146)||(10108373-10108485)
chr8 (31-146)||(43851668-43851782)
chr8 (35-144)||(10108634-10108743)
chr8 (35-144)||(14820558-14820667)
chr8 (37-146)||(30789773-30789882)
chr8 (35-146)||(5554872-5554983)
chr8 (31-146)||(7689783-7689898)
chr8 (31-146)||(10171403-10171518)
chr8 (34-146)||(14820298-14820409)
chr8 (35-144)||(21147941-21148051)
chr8 (35-141)||(5555133-5555239)
chr8 (30-141)||(42112993-42113103)
chr8 (34-146)||(7689527-7689638)
chr8 (30-138)||(30789519-30789626)
chr8 (34-146)||(21148199-21148311)
chr8 (41-144)||(26136690-26136793)
chr8 (31-146)||(17622893-17623005)
chr8 (37-146)||(42606019-42606128)
chr8 (34-146)||(18044092-18044202)
chr8 (31-146)||(26136945-26137059)
chr8 (38-146)||(17623154-17623261)
chr8 (31-145)||(22494644-22494757)
chr8 (38-146)||(43481581-43481690)
chr8 (34-146)||(2583323-2583435)
chr8 (35-144)||(14767511-14767621)
chr8 (20-71)||(17623032-17623083)
chr8 (31-146)||(2583580-2583696)
chr8 (1-71)||(7689705-7689777)
chr8 (1-71)||(10108552-10108624)
chr8 (1-67)||(42605939-42606007)
chr8 (31-124)||(26532807-26532901)
chr8 (34-146)||(35367413-35367525)
chr8 (95-144)||(20877069-20877118)
chr8 (1-71)||(22494566-22494638)
chr8 (1-71)||(26136867-26136939)
chr8 (34-146)||(42113247-42113356)
chr8 (33-136)||(38726700-38726803)
chr8 (34-145)||(42605759-42605868)
chr8 (30-131)||(21144764-21144865)
chr8 (18-71)||(14767650-14767703)
chr8 (34-146)||(14767770-14767879)
chr8 (33-144)||(39888486-39888597)
chr8 (6-71)||(43851793-43851860)
chr8 (93-144)||(1949657-1949708)
chr8 (20-71)||(2583502-2583553)
chr8 (20-71)||(5555051-5555102)
chr8 (20-71)||(30789652-30789703)
chr8 (93-144)||(40487736-40487787)
chr8 (18-64)||(21148080-21148126)
chr8 (33-144)||(20875703-20875812)
chr8 (33-137)||(40486641-40486744)
chr8 (30-125)||(21144598-21144695)
chr8 (37-80)||(22494454-22494497)
chr8 (30-81)||(44162731-44162782)
chr8 (1-64)||(26532907-26532972)
chr8 (20-66)||(43481459-43481505)
chr8 (37-82)||(39889628-39889673)
chr8 (1-71)||(42113108-42113180)
chr8 (34-82)||(28977686-28977734)
[»] chr1 (63 HSPs)
chr1 (34-159)||(18462276-18462400)
chr1 (31-146)||(39711332-39711447)
chr1 (37-146)||(39826312-39826421)
chr1 (35-144)||(17606572-17606679)
chr1 (31-146)||(4906965-4907080)
chr1 (31-146)||(33628693-33628808)
chr1 (34-146)||(4907225-4907337)
chr1 (34-146)||(52058271-52058383)
chr1 (34-146)||(24467632-24467743)
chr1 (31-146)||(39826053-39826168)
chr1 (30-146)||(24467886-24467999)
chr1 (34-144)||(33628953-33629063)
chr1 (30-146)||(52058014-52058130)
chr1 (30-146)||(17606307-17606427)
chr1 (30-145)||(18462543-18462658)
chr1 (31-146)||(30299491-30299606)
chr1 (34-146)||(8292807-8292919)
chr1 (31-146)||(8293067-8293183)
chr1 (34-146)||(39711077-39711187)
chr1 (38-146)||(30299235-30299342)
chr1 (34-146)||(34749368-34749480)
chr1 (35-146)||(39970909-39971021)
chr1 (42-146)||(29696568-29696671)
chr1 (31-146)||(29696818-29696932)
chr1 (31-146)||(34749141-34749255)
chr1 (30-130)||(42510034-42510133)
chr1 (30-146)||(48072220-48072336)
chr1 (31-146)||(30252158-30252275)
chr1 (34-144)||(48071966-48072076)
chr1 (35-144)||(20995932-20996040)
chr1 (31-146)||(18342279-18342392)
chr1 (93-155)||(20995692-20995754)
chr1 (1-71)||(39711254-39711326)
chr1 (31-146)||(39970648-39970764)
chr1 (34-146)||(43539350-43539462)
chr1 (34-137)||(17501993-17502095)
chr1 (33-144)||(27039643-27039753)
chr1 (1-71)||(29696745-29696812)
chr1 (1-70)||(34749261-34749332)
chr1 (6-71)||(42510143-42510210)
chr1 (1-70)||(48072144-48072215)
chr1 (20-71)||(17606490-17606541)
chr1 (20-71)||(33628835-33628886)
chr1 (1-68)||(13229916-13229985)
chr1 (20-66)||(39970791-39970837)
chr1 (35-144)||(43539611-43539720)
chr1 (1-66)||(30299418-30299485)
chr1 (1-70)||(39826174-39826245)
chr1 (20-71)||(4907107-4907158)
chr1 (97-144)||(42510341-42510388)
chr1 (30-79)||(7473862-7473911)
chr1 (31-146)||(13229991-13230107)
chr1 (30-126)||(16294206-16294302)
chr1 (95-144)||(37236723-37236772)
chr1 (93-136)||(17500782-17500825)
chr1 (93-144)||(43400758-43400809)
chr1 (24-70)||(43539530-43539576)
chr1 (1-71)||(20995851-20995922)
chr1 (6-71)||(52058140-52058207)
chr1 (20-71)||(7473937-7473988)
chr1 (20-71)||(24467810-24467860)
chr1 (93-144)||(26271207-26271258)
chr1 (50-82)||(215191-215223)
[»] chr4 (80 HSPs)
chr4 (34-146)||(9618983-9619095)
chr4 (34-146)||(38574231-38574343)
chr4 (34-146)||(46046687-46046798)
chr4 (31-146)||(9516613-9516728)
chr4 (31-146)||(34063985-34064100)
chr4 (34-146)||(3018014-3018127)
chr4 (34-146)||(9516873-9516985)
chr4 (31-146)||(9619239-9619354)
chr4 (31-146)||(26252497-26252612)
chr4 (31-146)||(9396959-9397073)
chr4 (31-151)||(38573967-38574086)
chr4 (34-141)||(15640724-15640830)
chr4 (31-146)||(35376388-35376502)
chr4 (34-146)||(9396702-9396814)
chr4 (34-146)||(31090324-31090436)
chr4 (35-146)||(48259826-48259938)
chr4 (30-146)||(3273879-3273993)
chr4 (38-146)||(35376166-35376273)
chr4 (38-139)||(31943959-31944061)
chr4 (34-144)||(48580129-48580239)
chr4 (30-146)||(15640974-15641091)
chr4 (35-144)||(37012712-37012821)
chr4 (34-146)||(7819018-7819129)
chr4 (31-146)||(31090063-31090179)
chr4 (38-146)||(37012974-37013081)
chr4 (31-146)||(46046433-46046542)
chr4 (34-146)||(3273624-3273737)
chr4 (30-149)||(13131940-13132060)
chr4 (93-146)||(31218303-31218356)
chr4 (31-146)||(12904750-12904864)
chr4 (31-146)||(31944210-31944325)
chr4 (35-146)||(13132205-13132314)
chr4 (35-152)||(4356145-4356261)
chr4 (35-144)||(48579871-48579980)
chr4 (35-144)||(3018276-3018383)
chr4 (94-155)||(41946959-41947020)
chr4 (31-146)||(48260011-48260125)
chr4 (34-80)||(26252337-26252383)
chr4 (1-71)||(26252418-26252491)
chr4 (1-71)||(9516734-9516806)
chr4 (1-71)||(9619161-9619233)
chr4 (31-79)||(7819274-7819322)
chr4 (35-83)||(34064246-34064294)
chr4 (35-146)||(41947120-41947229)
chr4 (20-71)||(46046569-46046620)
chr4 (30-144)||(4355887-4356000)
chr4 (35-144)||(18713224-18713335)
chr4 (36-137)||(31083362-31083463)
chr4 (21-71)||(31944132-31944182)
chr4 (34-131)||(43312227-43312324)
chr4 (1-71)||(7819196-7819268)
chr4 (1-71)||(37012831-37012903)
chr4 (1-70)||(9396882-9396953)
chr4 (33-144)||(36887685-36887796)
chr4 (20-71)||(18667471-18667522)
chr4 (101-144)||(18667620-18667663)
chr4 (20-71)||(34064127-34064178)
chr4 (20-71)||(48259933-48259984)
chr4 (1-71)||(4356063-4356135)
chr4 (34-83)||(18713026-18713075)
chr4 (31-146)||(20069560-20069673)
chr4 (1-71)||(31090185-31090257)
chr4 (1-67)||(38574092-38574160)
chr4 (31-146)||(31082188-31082302)
chr4 (34-82)||(36888943-36888991)
chr4 (24-71)||(3018194-3018241)
chr4 (93-144)||(43313533-43313584)
chr4 (93-144)||(53896451-53896502)
chr4 (24-66)||(15640902-15640944)
chr4 (93-139)||(51029095-51029141)
chr4 (42-143)||(12520643-12520746)
chr4 (98-146)||(7819347-7819395)
chr4 (20-64)||(48580011-48580055)
chr4 (108-144)||(50462733-50462769)
chr4 (35-78)||(18667553-18667596)
chr4 (34-80)||(20068518-20068564)
chr4 (1-71)||(13132065-13132137)
chr4 (20-68)||(3273806-3273853)
chr4 (30-82)||(36699483-36699535)
chr4 (97-137)||(46934083-46934123)
[»] scaffold0117 (1 HSPs)
scaffold0117 (37-144)||(12248-12355)
[»] chr2 (62 HSPs)
chr2 (31-146)||(23806212-23806327)
chr2 (34-146)||(17850849-17850961)
chr2 (31-146)||(17463351-17463466)
chr2 (34-144)||(19251476-19251585)
chr2 (40-144)||(23854693-23854797)
chr2 (34-138)||(26135828-26135932)
chr2 (31-151)||(26236355-26236474)
chr2 (34-146)||(26236130-26236242)
chr2 (31-146)||(15106327-15106440)
chr2 (31-146)||(17850590-17850704)
chr2 (34-146)||(15106070-15106182)
chr2 (30-146)||(19251729-19251844)
chr2 (34-146)||(22263454-22263568)
chr2 (31-145)||(30390463-30390577)
chr2 (35-144)||(26560561-26560668)
chr2 (34-146)||(42670982-42671094)
chr2 (28-146)||(20498750-20498866)
chr2 (30-146)||(13254695-13254811)
chr2 (34-146)||(13254500-13254612)
chr2 (30-138)||(17463103-17463210)
chr2 (30-146)||(20499004-20499120)
chr2 (35-144)||(42670722-42670833)
chr2 (38-152)||(39878100-39878213)
chr2 (35-144)||(22263197-22263305)
chr2 (1-71)||(26236277-26236349)
chr2 (43-146)||(23046710-23046813)
chr2 (43-146)||(44098894-44098997)
chr2 (1-71)||(22263315-22263387)
chr2 (102-146)||(23855025-23855069)
chr2 (38-146)||(34548577-34548684)
chr2 (30-144)||(12418982-12419095)
chr2 (30-144)||(12431042-12431155)
chr2 (20-71)||(15106249-15106300)
chr2 (20-71)||(23806134-23806185)
chr2 (42-144)||(30959943-30960044)
chr2 (30-136)||(33290062-33290168)
chr2 (30-144)||(33290308-33290420)
chr2 (20-70)||(23854811-23854861)
chr2 (96-146)||(26560880-26560930)
chr2 (30-79)||(13284667-13284716)
chr2 (1-70)||(19251653-19251724)
chr2 (1-70)||(26560678-26560749)
chr2 (37-144)||(30958689-30958795)
chr2 (33-127)||(21482142-21482235)
chr2 (41-146)||(26136087-26136192)
chr2 (20-71)||(42670864-42670915)
chr2 (1-72)||(30390583-30390656)
chr2 (93-146)||(23047904-23047957)
chr2 (34-79)||(23806022-23806067)
chr2 (1-71)||(26135999-26136071)
chr2 (18-71)||(39878284-39878337)
chr2 (93-137)||(13284735-13284779)
chr2 (34-82)||(23854929-23854977)
chr2 (30-73)||(13284484-13284527)
chr2 (3-71)||(17463273-17463343)
chr2 (30-71)||(33290231-33290272)
chr2 (30-71)||(39878361-39878402)
chr2 (93-146)||(39878395-39878447)
chr2 (100-144)||(13284417-13284461)
chr2 (23-71)||(20498927-20498975)
chr2 (1-64)||(17850710-17850775)
chr2 (38-80)||(26560821-26560863)
[»] chr6 (48 HSPs)
chr6 (34-146)||(9481185-9481297)
chr6 (34-146)||(32017767-32017878)
chr6 (31-146)||(18500318-18500432)
chr6 (31-146)||(26385281-26385396)
chr6 (34-146)||(19284132-19284244)
chr6 (31-146)||(24732198-24732312)
chr6 (34-146)||(24731938-24732053)
chr6 (38-146)||(26385541-26385649)
chr6 (39-144)||(9154884-9154990)
chr6 (31-149)||(33714483-33714605)
chr6 (1-71)||(26385402-26385474)
chr6 (30-137)||(9854146-9854251)
chr6 (28-146)||(30617970-30618083)
chr6 (94-145)||(10321737-10321788)
chr6 (97-146)||(18500655-18500704)
chr6 (1-71)||(24732120-24732192)
chr6 (1-67)||(33714611-33714679)
chr6 (35-83)||(9481446-9481494)
chr6 (30-146)||(30458903-30459020)
chr6 (93-146)||(2299635-2299688)
chr6 (38-126)||(3230129-3230217)
chr6 (1-70)||(32017660-32017731)
chr6 (20-67)||(30618147-30618194)
chr6 (1-71)||(18500438-18500511)
chr6 (1-71)||(2299434-2299506)
chr6 (42-79)||(2299580-2299617)
chr6 (37-136)||(21069527-21069627)
chr6 (34-83)||(33637625-33637674)
chr6 (30-82)||(14680949-14681001)
chr6 (38-82)||(17142744-17142788)
chr6 (42-82)||(30618232-30618272)
chr6 (24-71)||(33637709-33637757)
chr6 (93-136)||(2299353-2299396)
chr6 (37-144)||(21070802-21070910)
chr6 (93-146)||(34884560-34884613)
chr6 (35-71)||(17142798-17142834)
chr6 (28-71)||(3230016-3230059)
chr6 (20-71)||(9481364-9481415)
chr6 (37-72)||(10321997-10322032)
chr6 (30-136)||(14681141-14681247)
chr6 (31-74)||(33637788-33637831)
chr6 (97-136)||(34113591-34113630)
chr6 (30-80)||(10321799-10321849)
chr6 (101-139)||(30459229-30459267)
chr6 (37-82)||(32017605-32017648)
chr6 (1-71)||(30459025-30459097)
chr6 (31-71)||(2299389-2299428)
chr6 (98-146)||(33637844-33637892)
[»] scaffold0185 (2 HSPs)
scaffold0185 (30-146)||(3872-3988)
scaffold0185 (20-67)||(4014-4061)
[»] scaffold0361 (3 HSPs)
scaffold0361 (31-146)||(4823-4937)
scaffold0361 (28-146)||(4565-4684)
scaffold0361 (1-71)||(4745-4817)
[»] scaffold0449 (3 HSPs)
scaffold0449 (38-146)||(7466-7575)
scaffold0449 (31-146)||(7229-7344)
scaffold0449 (20-66)||(7375-7422)
[»] scaffold0141 (3 HSPs)
scaffold0141 (31-146)||(8582-8697)
scaffold0141 (38-146)||(8328-8434)
scaffold0141 (1-71)||(8505-8576)
[»] scaffold0809 (3 HSPs)
scaffold0809 (34-146)||(1414-1525)
scaffold0809 (33-151)||(1672-1786)
scaffold0809 (6-71)||(1592-1659)
[»] scaffold0352 (2 HSPs)
scaffold0352 (35-146)||(4670-4781)
scaffold0352 (34-146)||(5941-6054)
[»] scaffold0477 (3 HSPs)
scaffold0477 (31-146)||(5008-5121)
scaffold0477 (97-146)||(4883-4932)
scaffold0477 (1-71)||(4929-5002)
[»] scaffold0176 (2 HSPs)
scaffold0176 (93-146)||(15950-16003)
scaffold0176 (38-78)||(15899-15939)
[»] scaffold0881 (4 HSPs)
scaffold0881 (31-83)||(286-338)
scaffold0881 (20-71)||(365-416)
scaffold0881 (39-159)||(487-605)
scaffold0881 (99-139)||(229-269)
[»] scaffold0157 (1 HSPs)
scaffold0157 (42-143)||(171-274)
[»] scaffold0220 (1 HSPs)
scaffold0220 (30-81)||(27648-27699)


Alignment Details
Target: chr7 (Bit Score: 86; Significance: 4e-41; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 28218426 - 28218538
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  28218426 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacga 28218525  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  28218526 aaagaggtattta 28218538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 28218297 - 28218181
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  28218297 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacaggg 28218198  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  28218197 acgaaaagaggtattta 28218181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 41600221 - 41600333
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||| |    
T  41600221 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacaa 41600320  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  41600321 aaagaggtattta 41600333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 20419654 - 20419539
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||| |||||    
T  20419654 aatgagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattataggga 20419555  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  20419554 cgaaaagaggtattta 20419539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 23704921 - 23705035
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||| ||    
T  23704921 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttt-acagggactaaaaccggaattcgctaatattacagaga 23705019  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  23705020 cgaaaagaggtattta 23705035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 12006803 - 12006915
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||| |||||||||||||||||||| | ||||    
T  12006803 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaatcggaattcgctaatattacatgaacga 12006902  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  12006903 aaagaggtattta 12006915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 48672542 - 48672654
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||         |||||||||||||||| |||||||||||||||||| |||||    
T  48672542 gagggaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacagagacga 48672641  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  48672642 aaagaggtattta 48672654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 12006658 - 12006544
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |          ||||||||||||| ||||||||||||||||||||||||    
T  12006658 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaatt-tttttttttacagggactaaaatcggaattcgctaatattacaggga 12006560  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  12006559 cgaaaagaggtattta 12006544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 23704776 - 23704665
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||         |||| || |||||||||||||||||||||||||||||||||    
T  23704776 gagggaccaaaagtggaagaatctgaaattacagggacaaaatgtaaatctttttttt-acagtgagtaaaaccggaattcgctaatattacagggacga 23704678  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  23704677 aaagaggtattta 23704665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 20419799 - 20419912
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||||||||||||     
T  20419799 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgttaatattacagggaca 20419898  T
Q  133 aaaagaggtattta 146  Q
    ||||||||||||||    
T  20419899 aaaagaggtattta 20419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 20458954 - 20459065
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||         ||||| ||| |||||||||||| ||||||||||||||||||    
T  20458954 gagggaccaaaagtggaagaatctgaaattacagtgacaaaatctaaatctttttttttacaggtact-aaaccggaattccctaatattacagggacga 20459052  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  20459053 aaagaggtattta 20459065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 25772594 - 25772706
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||         |||||||||||||| ||||||| ||||||||| ||||||||    
T  25772594 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcactaatattatagggacga 25772693  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  25772694 aaagagatattta 25772706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 38879842 - 38879726
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||          ||||| |||||||  ||||||||||||||||||||||    
T  38879842 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaattggaattcgctaatattacaggg 38879743  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  38879742 acgaaaagaggtattta 38879726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 16995317 - 16995203
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||          ||||| |||||||||| |||||||||||||||||| ||    
T  16995317 aatgtgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-attttttttacaggaactaaaaccgaaattcgctaatattacagaga 16995219  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  16995218 cgaaaagaggtattta 16995203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 20458809 - 20458695
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||          ||||||||||||||||||||||| ||||||||||||||    
T  20458809 aatgagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaat-tttttatttacagggactaaaaccggaattcgttaatattacaggga 20458711  T
Q  131 cgaaaagaggtattta 146  Q
    |||||| | |||||||    
T  20458710 cgaaaaaatgtattta 20458695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 20963760 - 20963868
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||          ||||||||||||||||||||||||||||||||||||||| ||||    
T  20963760 ggaccaaaagtgaaagaatctgaaattacagggactaaatctaaat-tttatttttacagggactaaaaccggaattcgctaatattacagggacaaaaa 20963858  T
Q  137 gaggtattta 146  Q
    ||||||||||    
T  20963859 gaggtattta 20963868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 23383763 - 23383875
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||          |||||||||||| | |||||| ||||||||||||||||||    
T  23383763 gagggaccaaaggtggaagaatatgaaattacagggacaaaatctaaatcttttttttttcagggactaaaatcagaattcactaatattacagggacga 23383862  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  23383863 aaagaggtattta 23383875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 1250469 - 1250580
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||         |||| ||||||||| ||||||||||||||||||| ||||||    
T  1250469 gagggaccaaaagtggaagaatatgaaattaaagggacaaaatctaaatcttttagtttacagagactaaaactggaattcgctaatattacaaggacga 1250568  T
Q  134 aaagaggtattt 145  Q
    |||||| |||||    
T  1250569 aaagagatattt 1250580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 41600076 - 41599961
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||          | | |||||||||||| |||||||||||||||||||||    
T  41600076 aatgagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaatatttttttttatatggactaaaaccgaaattcgctaatattacaggga 41599977  T
Q  131 cgaaaagaggtattta 146  Q
     |||||||||||||||    
T  41599976 tgaaaagaggtattta 41599961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 10409634 - 10409748
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||         ||||||||||||| |||||||||||||||||||| |||    
T  10409634 aatgagggatcaaaagtggaagaatctaaaattacagagacaaaatctaaatctttttttt-acagggactaaaatcggaattcgctaatattacatgga 10409732  T
Q  131 cgaaaagaggtattta 146  Q
     |||||||||||||||    
T  10409733 tgaaaagaggtattta 10409748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 38879987 - 38880096
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |    |||||||||||||||| |||||||||||||||||||    
T  38879987 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttttttttaa---agactaaaaccggaatttgctaatattacagggacga 38880083  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  38880084 aaagaggtattta 38880096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 44816953 - 44816834
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--nnnnnnnnnacagggactaaaaccggaattcgctaatattacagg 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||           |||| ||||||||||| |||||||||||||||||||    
T  44816953 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaaatctttttttttttacagagactaaaaccgaaattcgctaatattacagg 44816854  T
Q  129 gac--gaaaagaggtattta 146  Q
    |||  |||||||||||||||    
T  44816853 gacgagaaaagaggtattta 44816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 25772481 - 25772367
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||         ||||  ||||||| || |||||||||||||||||||||    
T  25772481 aatgagggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatc-ttttttttacagaaactaaaatcgaaattcgctaatattacaggga 25772383  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  25772382 cgaaaagaggtattta 25772367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 48672397 - 48672280
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn--acagggactaaaaccggaattcgctaatattacagg 128  Q
    ||||||||| ||||||||||||||||||||||||||| ||| |||||||||||           |||| ||||||||||| ||||| |||||||||||||    
T  48672397 aatgagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaatctttttttttttacagagactaaaaccgaaattcactaatattacagg 48672298  T
Q  129 gacgaaaagaggtattta 146  Q
    ||||||||||||||||||    
T  48672297 gacgaaaagaggtattta 48672280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 6465969 - 6465858
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||| | ||| |||||||||          |||||||||||||||||||||||||||||||||| ||||||    
T  6465969 gagggaccaaaagtggaagaatctgaaattacaagaacataatctaaat-attttttttacagggactaaaaccggaattcgctaatattacatggacga 6465871  T
Q  134 aaagaggtattta 146  Q
    ||| || ||||||    
T  6465870 aaaaagatattta 6465858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 20963613 - 20963497
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||          ||||||||||||||  |||||| ||||||||||||||    
T  20963613 aatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatcttttttttttacagggactaaaactagaattcactaatattacaggg 20963514  T
Q  130 acgaaaagaggtattta 146  Q
    ||||||| || ||||||    
T  20963513 acgaaaatagatattta 20963497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23704915 - 23704843
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23704915 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 23704843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 48648379 - 48648265
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||||||         ||| ||||||||| || |||||||| ||||||||||||    
T  48648379 aatgagggaccaaaaatgaaaaaatctgaaattacagggacaaaatctaaatc-tttttcttacatggactaaaatcgaaattcgctgatattacaggga 48648281  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||| ||||||    
T  48648280 cgaaaagagatattta 48648265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 150
Target Start/End: Complemental strand, 7658083 - 7657968
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn--acagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||| |||||| |||||||||| ||||| ||||||||||           ||||||| |||||||| ||||||||||||||||| |||||||    
T  7658083 ggaccaaaagtgtaagaatttgaaattacatggacataatctaaatctttttttttttacagggattaaaaccgaaattcgctaatattacatggacgaa 7657984  T
Q  135 aagaggtatttagcct 150  Q
    ||||||||||||||||    
T  7657983 aagaggtatttagcct 7657968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20458815 - 20458887
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  20458815 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggac 20458887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 23383618 - 23383502
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||| |||| ||||||||| |||||||| ||||||||||||||||||          | |||||||||||||||||||| |||||||||||| |    
T  23383618 aatgagggacaaaaaatggaagaatatgaaattatagggacaaaatctaaatcttttttttttatagggactaaaaccggaattcactaatattacagag 23383519  T
Q  130 acgaaaagaggtattta 146  Q
    ||||||||| |||||||    
T  23383518 acgaaaagaagtattta 23383502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44816959 - 44817031
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  44816959 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggac 44817031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 24195056 - 24195142
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgct 117  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||         |||||||||||||||||| ||||||    
T  24195056 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccggatttcgct 24195142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 20963622 - 20963691
Alignment:
Q  4 taagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  20963622 taagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaagaatatgaaattacaaggac 20963691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 7658236 - 7658340
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    |||||||||||||||||||| ||||||||||||||||||||   |          |||| ||||||||||| |||||| |||||||||||||||||||||    
T  7658236 gaccaaaagtggaagaatcttaaattacagggacaaaatcttttt----ttttttacagagactaaaaccgaaattcgttaatattacagggacgaaaag 7658331  T
Q  138 aggtattta 146  Q
    |||||||||    
T  7658332 aggtattta 7658340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20419660 - 20419732
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  20419660 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggac 20419732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25772487 - 25772559
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  25772487 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggac 25772559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41600082 - 41600154
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  41600082 acgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggac 41600154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12006664 - 12006732
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    |||| ||||||||||| |||  ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  12006664 acgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacag 12006732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 24195198 - 24195247
Alignment:
Q  97 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  24195198 ggactaaaatcagaattcgctaatattacagggacgaaaagaggtattta 24195247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48648385 - 48648457
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||| |||||||| |||  |||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  48648385 acgtaagtagaatctgcatacatggcacgtaaaaggagggaccaaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31851363 - 31851434
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||| ||||||||||| |||  ||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  31851363 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagaaatatgaaattacaggga 31851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 33131749 - 33131638
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    ||||||| |||||| ||||||||||||||| | ||||||| |||||||||          ||||||||||||||||||| ||||| |||||||||||||     
T  33131749 tgagggagcaaaagcggaagaatctgaaatgatagggacagaatctaaatttttttatttacagggactaaaaccggaaatcgctcatattacagggacc 33131650  T
Q  133 aaaagaggtatt 144  Q
    ||| | ||||||    
T  33131649 aaagggggtatt 33131638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 48648492 - 48648602
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||| |||||||||||||| ||||||||  |||||||||||||||         | || |||||||| || |||||||||||||||| |||||||    
T  48648492 gagggaccagaagtggaagaatctaaaattacatagacaaaatctaaatc--tttttttatagagactaaaatcgaaattcgctaatattactgggacga 48648589  T
Q  134 aaagaggtattta 146  Q
    ||||| |||||||    
T  48648590 aaagaagtattta 48648602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 31851506 - 31851548
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaa 80  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  31851506 gaccaaaagtggaagaatatgaaattacagggacaaaatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 31852157 - 31852203
Alignment:
Q  98 gactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  31852157 gactaaaaccgaaattcgttaatattacagggacgaaaagaggtatt 31852203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10409628 - 10409556
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  ||||| ||||||||||||| |||||||||| ||||||||||||||| ||||    
T  10409628 acgttagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggac 10409556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23383624 - 23383696
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  || ||||||||||||||||||||||||| | |||| |||||||||| ||||    
T  23383624 acgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacaaggac 23383696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 24194978 - 24194929
Alignment:
Q  35 agggaccaaaagtg-gaagaatctgaaattacagggacaaaatctaaatc 83  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||    
T  24194978 agggaccaaaagtgagaggaatctgaaattacagggacaaaatctaaatc 24194929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 33162862 - 33162911
Alignment:
Q  97 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    |||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  33162862 ggactaaaacagaaattcgctaatattacagagacgaaaagaggtattta 33162911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48672403 - 48672475
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  ||||| ||||||||||||| |||||||||| ||||||||||||||| ||||    
T  48672403 acgtcagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggac 48672475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 10409488 - 10409440
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 83  Q
    |||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  10409488 agggactaaaagtagaagaatctgaaattacaaggacaaaatctaaatc 10409440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 14800918 - 14801013
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagg 128  Q
    |||| ||||||  ||||||||||||||||| ||||||||||||||||||           |||||||||||||||| |||||||| ||||||||||    
T  14800918 tgagagaccaattgtggaagaatctgaaatgacagggacaaaatctaaacttttttttttacagggactaaaaccgaaattcgctcatattacagg 14801013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 15247910 - 15248005
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagg 128  Q
    |||| ||||||  ||||||||||||||||| ||||||||||||||||||           |||||||||||||||| |||||||| ||||||||||    
T  15247910 tgagagaccaattgtggaagaatctgaaatgacagggacaaaatctaaacttttttttttacagggactaaaaccgaaattcgctcatattacagg 15248005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 14630450 - 14630359
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattaca 126  Q
    |||||||||||  ||||||||||||||||| ||||||||| |||||||  |         ||||||||||||||||||||||||| ||||||||    
T  14630450 tgagggaccaattgtggaagaatctgaaatgacagggacagaatctaa--ccttttttttacagggactaaaaccggaattcgctcatattaca 14630359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 14646972 - 14647015
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  14646972 acagggactaaaaccggaattcgctcatattacagggactaaaa 14647015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 23258246 - 23258297
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||||| |||||||||||||||||||||||||| ||| ||||||| ||||    
T  23258246 acagggaccaaaaccggaattcgctaatattacagagaccaaaagagatatt 23258297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38879848 - 38879913
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaatta 64  Q
    |||||||||||||||| |||  |||||| |||||||||||||||||  |||| |||||||||||||    
T  38879848 acgtaagcagaatctgcatacatggcacataaaatgagggaccaaatttggaggaatctgaaatta 38879913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 7842546 - 7842467
Alignment:
Q  42 aaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatat 122  Q
    ||||||||| ||||||||||||||||||||| |||||||| |         ||||||||||||||| ||||||||||||||    
T  7842546 aaaagtggaggaatctgaaattacagggacagaatctaaa-ctttttttttacagggactaaaaccagaattcgctaatat 7842467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 24195014 - 24194973
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  24195014 aaatgagggaccaaaagtggaggaatctgaaattatagggac 24194973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33162789 - 33162717
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  |||||| ||||||||||||||||||||| |  |||||||||||||| ||||    
T  33162789 acgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatctgaaattacacggac 33162717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 1250324 - 1250273
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    |||||| |||||||||||||||||||| |||||| | ||||||||| |||||    
T  1250324 aatgagagaccaaaagtggaagaatctaaaattaaaaggacaaaatttaaat 1250273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 28218320 - 28218359
Alignment:
Q  32 atgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  28218320 atgagggaccaaaagtggagtaatctgaaattacagggac 28218359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 146
Target Start/End: Original strand, 6466087 - 6466180
Alignment:
Q  53 aatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    |||||||||||||| ||||| |||| |||||         |||| ||||||||||| ||||||||||||||||||  || ||||||| ||||||    
T  6466087 aatctgaaattacacggacagaatccaaatctttttttttacagagactaaaaccgaaattcgctaatattacagatacaaaaagagatattta 6466180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 31851297 - 31851244
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    ||||| ||||||| || ||||| ||||||||| | |||||||||||||||||||    
T  31851297 acaggaactaaaatcgaaattcactaatattaaaaggacgaaaagaggtattta 31851244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 6466077 - 6466037
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||||||||||||||||||||  ||| ||||||||||||||    
T  6466077 aaatgagggaccaaaagtggagtaatatgaaattacaggga 6466037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 7658119 - 7658159
Alignment:
Q  24 cacgtaaaatgagggaccaaaagtggaagaatctgaaatta 64  Q
    ||||||||||||||||| |||||| || |||||||||||||    
T  7658119 cacgtaaaatgagggactaaaagtagatgaatctgaaatta 7658159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 44817098 - 44817142
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatct 78  Q
    ||||||||||||||| |||||| |||||||| | |||||||||||    
T  44817098 gagggaccaaaagtgaaagaatatgaaattataaggacaaaatct 44817142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 23979160 - 23979276
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  23979160 aaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggg 23979259  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  23979260 acgaaaagaggtattta 23979276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 14144020 - 14143896
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||    
T  14144020 aaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttt-acagggactaaaaccggaattcgctaatattacaggg 14143922  T
Q  130 acgaaaagaggtatttagcctcttat 155  Q
    ||||||||||||||||| ||| ||||    
T  14143921 acgaaaagaggtatttacccttttat 14143896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 24837287 - 24837172
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||         |||||||||||||||||||||||||| |||||||||||    
T  24837287 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctattattacaggga 24837188  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  24837187 cgaaaagaggtattta 24837172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 31799754 - 31799643
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||| |||||||||||||||||||||| |||||||||    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactgaaaccggaattcgctaatattatagggacgaa 31799655  T
Q  135 aagaggtattta 146  Q
    ||||||||||||    
T  31799654 aagaggtattta 31799643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 14411812 - 14411700
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||||||||||||||  |||||||| ||||||         |||||||||||||||||||||||||||||||||||||||||    
T  14411812 gagggaccaaaagtggaagaatctgaaattacatagacaaaatataaatctttttttatacagggactaaaaccggaattcgctaatattacagggacga 14411713  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  14411712 aaagaggtattta 14411700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 17762542 - 17762657
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||         ||||||||||||||| ||||||||||||| ||||||||    
T  17762542 aatgagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatactacaggga 17762641  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  17762642 cgaaaagaggtattta 17762657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 18336720 - 18336830
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| |||||||||||||    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaat-ttacagggacgaa 18336818  T
Q  135 aagaggtattta 146  Q
    ||||||||||||    
T  18336819 aagaggtattta 18336830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 7126180 - 7126292
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||         |||  ||||||||||||||||||||||||||||||||| ||    
T  7126180 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaaagactaaaaccggaattcgctaatattacagggatga 7126279  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  7126280 aaagaggtattta 7126292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 24837432 - 24837544
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||||||    
T  24837432 gagggagcaaaagtagaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaactggaattcgctaatattacagggacga 24837531  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  24837532 aaagaggtattta 24837544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 6817241 - 6817126
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||         |||||||||||||||||||||| ||||||||||| ||    
T  6817241 aaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatctttttttt-acagggactaaaaccggaattcactaatattacaagg 6817143  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  6817142 acgaaaagaggtattta 6817126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 17762397 - 17762286
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||         ||||||||||||||||||||||||||||||||||||||| |    
T  17762397 gagggaccaaaagtggaagaatctgaaattacaggaacaaaatataaatctttttttt-acagggactaaaaccggaattcgctaatattacagggacaa 17762299  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  17762298 aaagaggtattta 17762286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 41001616 - 41001727
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||         ||| |||||||||||||||||||||||||||||||||||||    
T  41001616 gagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatc-ttttttttacaaggactaaaaccggaattcgctaatattacagggacga 41001714  T
Q  134 aaagaggtattta 146  Q
    ||| |||||||||    
T  41001715 aaaaaggtattta 41001727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 14144165 - 14144274
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||| ||||||||| ||||||||||| ||||||    
T  14144165 agggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgttaatattacagtgacgaa 14144264  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  14144265 aagaggtatt 14144274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 7126031 - 7125923
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||| |||||||||||||||||||||| |||||    
T  7126031 agggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatc-ttttttttacagggactaaaatcggaattcgctaatattacaggaacgaa 7125933  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  7125932 aagaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 24074418 - 24074306
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||          |||||||||||||||| ||||||||||||||||| ||||||    
T  24074418 gagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttacagggactaaaaccgaaattcgctaatattacatggacga 24074319  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  24074318 aaagaggtattta 24074306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 29445070 - 29445178
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||         ||| |||||||||| |||||||||||||||||||||||||||    
T  29445070 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttttaca-ggactaaaactggaattcgctaatattacagggacgaa 29445168  T
Q  135 aagaggtatt 144  Q
    ||||| ||||    
T  29445169 aagagatatt 29445178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 4919108 - 4918992
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||          ||||| |||||||||| |||||||||||||||||| |    
T  4919108 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaaccgaaattcgctaatattacagag 4919009  T
Q  130 acgaaaagaggtattta 146  Q
    | |||||||||||||||    
T  4919008 atgaaaagaggtattta 4918992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 31799903 - 31800013
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||||         ||||| |||||||||||||||||||||||||| ||||||||    
T  31799903 gagggatcaaaagaggaagaatctgaaattacatggacaaaatctaaatctttttttttacagg-actaaaaccggaattcgctaatattatagggacga 31800001  T
Q  134 aaagaggtattt 145  Q
    ||||||||||||    
T  31800002 aaagaggtattt 31800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 994003 - 994120
Alignment:
Q  28 taaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacag 127  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||         |||||||||||||||| ||||||||| |||||| |    
T  994003 taaaaggagggaccaaaagtggaagaatctgcaattacagggacaaaatctaaatcttttattctacagggactaaaaccgaaattcgctattattacgg 994102  T
Q  128 ggacgaaaagaggtattta 146  Q
    |||| |||| |||||||||    
T  994103 ggac-aaaaaaggtattta 994120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 30512405 - 30512291
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||         |||||||||||||||  ||||| |||||||||||||||    
T  30512405 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatc-ctttttttacagggactaaaaccaaaattcactaatattacaggga 30512307  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||| ||||||    
T  30512306 cgaaaagagatattta 30512291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 30552745 - 30552631
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||         |||||||||||||||  ||||| |||||||||||||||    
T  30552745 aatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatc-ctttttttacagggactaaaaccaaaattcactaatattacaggga 30552647  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||| ||||||    
T  30552646 cgaaaagagatattta 30552631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 18336583 - 18336470
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||          ||||||||||||| |||||||||||||||||| |||||||    
T  18336583 gagggatcaaaagcggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaatcggaattcgctaatattatagggacg 18336484  T
Q  133 aaaagaggtattta 146  Q
    ||||||| ||||||    
T  18336483 aaaagagatattta 18336470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 24650962 - 24651074
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||| ||          ||| ||||||||||||||||||||||||||||||| |||||    
T  24650962 gagggatcaaaagtggaagaatctaaaattacagggataaaatctagattttcttttttacatggactaaaaccggaattcgctaatattacagagacga 24651061  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  24651062 aaagaggtattta 24651074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 993865 - 993753
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||| |||| |||||||| |          ||||||||||||||||||||||||||||||||||| ||    
T  993865 aatgagggaccaaaagtggaagaatatgaaattacaaggactaaatctaatt---tttttttacagggactaaaaccggaattcgctaatattacagaga 993769  T
Q  131 cgaaaagaggtattta 146  Q
    |||||||| |||||||    
T  993768 cgaaaagaagtattta 993753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 4919253 - 4919364
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| |          ||||| ||||||||||||||||||||||||| ||| |||||    
T  4919253 gagggatcaaaagtagaagaatctgaaattacagggacaaaatctaatt-tttttttttacaggaactaaaaccggaattcgctaatattccagagacga 4919351  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  4919352 aaagaggtattta 4919364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 27159104 - 27158996
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||         || | ||||||||| | ||||||||||||||||| |||||||    
T  27159104 agggaccaaaagtggaagaatctgaaattacagggacaaaatttaaatc-tttttttaactgagactaaaactgaaattcgctaatattacatggacgaa 27159006  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  27159005 aagaggtatt 27158996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 41001471 - 41001370
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| |          |||||||||||||||| |||||||||||||||||||||    
T  41001471 aatgaaggaccaaaagtggaagaatatgaaattacagggacaaaatctaatt---tttttttacagggactaaaaccgaaattcgctaatattacaggga 41001375  T
Q  131 cgaaa 135  Q
    |||||    
T  41001374 cgaaa 41001370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 14411926 - 14412040
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||          |||||||||||||||| |||||| |||||||| || ||    
T  14411926 aatgagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaaat-tttttttttacagggactaaaaccgaaattcgttaatattatagaga 14412024  T
Q  131 cgaaaagaggtattta 146  Q
     |||||||||||||||    
T  14412025 tgaaaagaggtattta 14412040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 29444921 - 29444810
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||| ||||||| |||||||||| ||||| ||||||||||         ||||||||||||| | ||||||| |||||||||||||||||    
T  29444921 gagggaccaaaagtagaagaatatgaaattacaaggacataatctaaatccttttttttacagggactaaaatcagaattcgttaatattacagggacga 29444822  T
Q  134 aaagaggtattt 145  Q
    |||||| |||||    
T  29444821 aaagagatattt 29444810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 27159221 - 27159327
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||| ||||||||| | ||||||||||||||||||||||||          ||| |||||||||||| ||||||||||||||||| |||||||    
T  27159221 agggaccaaaaatggaagaatataaaattacagggacaaaatctaaat---tttttttacaaggactaaaaccgaaattcgctaatattacaaggacgaa 27159317  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  27159318 aagaggtatt 27159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 20709478 - 20709584
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||         |||||||||||||||  |||||| |||||||||| |||||||||    
T  20709478 ggacaaaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttt-acagggactaaaaccaaaattcgttaatattacatggacgaaaa 20709576  T
Q  137 gaggtatt 144  Q
    ||||||||    
T  20709577 gaggtatt 20709584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 22571196 - 22571090
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||||||||||||||||||| ||||||||||| || | |||||||||          ||||||||||||| |||||||||||||||||||| ||    
T  22571196 aaatgagggaccaaaagtggaagaatatgaaattacagagatataatctaaatttttttttttacagggactaaaatcggaattcgctaatattacaagg 22571097  T
Q  130 acgaaaa 136  Q
    || ||||    
T  22571096 acaaaaa 22571090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 24650810 - 24650705
Alignment:
Q  39 accaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaaga 138  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||         |||  || |||||||| |||||| ||||||||||||||||||||||    
T  24650810 accaaaagtggaagaatatgaaattacaggaacaaaatctaaatcttttttt--acatagattaaaaccgaaattcgttaatattacagggacgaaaaga 24650713  T
Q  139 ggtattta 146  Q
    ||||||||    
T  24650712 ggtattta 24650705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7126041 - 7126113
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  7126041 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggac 7126113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 20709331 - 20709278
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 83  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  20709331 aaatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaaatc 20709278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 24074561 - 24074649
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgcta 118  Q
    |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||         ||||||| ||||||||||||||||||    
T  24074561 aaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggattaaaaccggaattcgcta 24074649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24837293 - 24837365
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  24837293 acgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggac 24837365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 18336685 - 18336638
Alignment:
Q  24 cacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18336685 cacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 18336638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 24650845 - 24650896
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  24650845 atggcacgtaaaatgagggaccaaaaatggaggaatctgaaattacagggac 24650896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 41001479 - 41001549
Alignment:
Q  3 gtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||| |||  |||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  41001479 gtaagcagaatctgcatacatggcacgtaaaatgagggactaaaaatggaggaatctgaaattacagggac 41001549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 41424635 - 41424521
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||           ||| ||||  ||||||||||||||||||||| || ||    
T  41424635 aaatgagggactaaaagtggaagaatctgaaatgacagggacagaatctaaacttttttttttacaaggacctaaaccggaattcgctaatattgcaagg 41424536  T
Q  130 acgaaaagaggtatt 144  Q
    || ||||||||||||    
T  41424535 accaaaagaggtatt 41424521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 6817388 - 6817432
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  6817388 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 6817432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20709336 - 20709407
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||| ||||||||||| |||  |||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  20709336 acgtcagcagaatctgcatacatggcacgtaaaatgagggacaaaaagtggaggaatatgaaattacaggga 20709407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 14144134 - 14144083
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  14144134 atggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacatggac 14144083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14411920 - 14411847
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagt-ggaagaatctgaaattacagggac 71  Q
    |||||||||||||||  |||  || |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  14411920 acgtaagcagaatctacatacatgacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 14411847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 24074537 - 24074487
Alignment:
Q  18 atatggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagg 68  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||||    
T  24074537 atatggcacgtaaaatgagggaccaaaagtggagaaatttgaaattacagg 24074487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 993871 - 993942
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  || ||||||||||||||||||||||||||| |||| || ||||||||||||    
T  993871 acgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatg-aattacagggac 993942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4919114 - 4919182
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    ||||||||||||| || |||  ||| |||||||||||||||||||||||||| |||| |||||||||||    
T  4919114 acgtaagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtggaggaatttgaaattacag 4919182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6817246 - 6817314
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    |||| ||||||||||| |||  ||||||||||||| ||||||||||| |||| ||||||||||||||||    
T  6817246 acgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaaatggaggaatctgaaattacag 6817314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17762536 - 17762464
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||| || |||  ||| || ||||||||||||||||||||||| |||||| |||||||||||||    
T  17762536 acgtaagcagaatttgcatacatgggacataaaatgagggaccaaaagtggaggaatctaaaattacagggac 17762464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31799764 - 31799836
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||| || |||  ||||| |||||||||||||||||||||||| || | |||||||||||||||    
T  31799764 acgtaagcagaatttgtatacatggcatgtaaaatgagggaccaaaagtggaggattttgaaattacagggac 31799836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 20959358 - 20959402
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  20959358 gaccaaaagtggaggaatctgaaattgcagggacaaaatctaaat 20959402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 32234015 - 32233967
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 81  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  32234015 tgagggaccaaaagtggaagaatctcaaatgatagggacaaaatctaaa 32233967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27159114 - 27159185
Alignment:
Q  1 acgtaagcagaatctgaatatggcacgtaaaatgagggaccaaaagt-ggaagaatctgaaattacagggac 71  Q
    |||| |||| |||||  ||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  27159114 acgtcagcaaaatctacatacggcacgtaaaatgagggatcaaaagtgggaggaatctgaaattacagggac 27159185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 28070580 - 28070532
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 81  Q
    ||||||||  |||||||||||||||||||||||| ||||| ||||||||    
T  28070580 tgagggactcaaagtggaagaatctgaaattacaaggacagaatctaaa 28070532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 28071759 - 28071806
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 80  Q
    ||||||||| |||||||||||||||||||||||| ||| | |||||||    
T  28071759 tgagggacctaaagtggaagaatctgaaattacaaggatataatctaa 28071806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 28071825 - 28071871
Alignment:
Q  98 gactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    ||||||||||| |||||||| ||||||||||||| ||||| ||||||    
T  28071825 gactaaaaccgaaattcgctcatattacagggaccaaaaggggtatt 28071871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 20947056 - 20947097
Alignment:
Q  25 acgtaaaatgagggaccaaaagtggaagaatctgaaattaca 66  Q
    |||| ||||||| ||||||||||||| |||||||||||||||    
T  20947056 acgtgaaatgagtgaccaaaagtggaggaatctgaaattaca 20947097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 9267093 - 9266978
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  9267093 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggga 9266994  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  9266993 cgaaaagaggtattta 9266978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 14171852 - 14171961
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  14171852 ggaccaaaagtggaagaatcagaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacgaaaa 14171951  T
Q  137 gaggtattta 146  Q
    ||||||||||    
T  14171952 gaggtattta 14171961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 35995796 - 35995681
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||| |    
T  35995796 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaaaaaaaaattctacagggactaaaaccggaattcgctaatattacaggaa 35995697  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  35995696 cgaaaagaggtattta 35995681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 14262299 - 14262411
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  14262299 gagggactaaaagtggaacaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacga 14262398  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  14262399 aaagaggtattta 14262411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 45970026 - 45969918
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||| ||||||||||||||||||||||    
T  45970026 gaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcactaatattacagggacgaaaag 45969927  T
Q  138 aggtattta 146  Q
    |||||||||    
T  45969926 aggtattta 45969918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 16722105 - 16721994
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||||||||||||||||||||||||||||||||||    
T  16722105 agggaccaaaagtggaagaatctgaaattacatggacaaaatctaaatttttttttttacagtgactaaaaccggaattcgctaatattacagggacgaa 16722006  T
Q  135 aagaggtattta 146  Q
    ||||||||||||    
T  16722005 aagaggtattta 16721994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 16722255 - 16722366
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||| | |||||||||||||||||||||||||    
T  16722255 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaactgaaattcgctaatattacagggacgaa 16722354  T
Q  135 aagaggtattta 146  Q
    ||||||||||||    
T  16722355 aagaggtattta 16722366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 14262150 - 14262041
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||||||||||||||||||||||||||||||||    
T  14262150 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatatttttttttacaaggactaaaaccggaattcgctaatattacagggacgaa 14262051  T
Q  135 aagaggtatt 144  Q
    ||||| ||||    
T  14262050 aagagatatt 14262041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 14162135 - 14162243
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||||||||| ||    
T  14162135 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctctttttt-acagggactaaaaccggaattcgctaatattacagggacaaa 14162233  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  14162234 aagaggtatt 14162243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 19113028 - 19113140
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||         ||||||||||||||||||||||| |||||||| ||||||||    
T  19113028 gagggaccaaaagtagaagaatctgaaattacagggataaaatctaaatctttttttttacagggactaaaaccggaattcgttaatattatagggacga 19113127  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  19113128 aaagaggtattta 19113140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 33372521 - 33372409
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||         ||||| ||||||||| |||||||||||||||||||||||||    
T  33372521 gagggaccaaaagtggaataatctgaaattacagggacaaaatctaaatctttttatttacaggaactaaaaccagaattcgctaatattacagggacga 33372422  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  33372421 aaagagatattta 33372409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 43572504 - 43572392
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||| ||||||||||||||||||| ||||    
T  43572504 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttttctttttacagggactaaaaccgaaattcgctaatattacaggaacga 43572405  T
Q  134 aaagaggtattta 146  Q
    ||||| |||||||    
T  43572404 aaagatgtattta 43572392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 21633156 - 21633271
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||         | |||||||||||| | |||||||||||||||||||||    
T  21633156 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaactgaaattcgctaatattacaggga 21633255  T
Q  131 cgaaaagaggtattta 146  Q
    ||| || |||||||||    
T  21633256 cgagaataggtattta 21633271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 5800869 - 5800977
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||         |||||||||||| |||||||||||||||||||||||||||||    
T  5800869 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaa-ccggaattcgctaatattacagggacgaa 5800967  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  5800968 aagaggtatt 5800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 5800720 - 5800608
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||         |||||||||||||||| |||||| |||||||||||||||||    
T  5800720 gagggaccaaaaatggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccgaaattcgttaatattacagggacga 5800621  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  5800620 aaagaggtattta 5800608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 19112879 - 19112767
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||||| ||||||    
T  19112879 agggaccaaaagtggaagaatatgaaattccagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacatggacga 19112780  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  19112779 aaagaggtattta 19112767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 20853959 - 20854070
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||| ||||||||||||||||| ||||||    
T  20853959 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttaca-ggactaaaaccgaaattcgctaatattacatggacga 20854057  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  20854058 aaagagatattta 20854070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 30500304 - 30500415
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||          |||||||||||||| ||||||||||||||||||||||||||    
T  30500304 gagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaat-tttttttttacagggactaaaactggaattcgctaatattacagggacga 30500402  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  30500403 aaagaggtattta 30500415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 33372669 - 33372779
Alignment:
Q  36 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaa 135  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||         ||||| ||||||| || |||||||||||||||| |||||||||    
T  33372669 gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttaacaggaactaaaatcgaaattcgctaatattacggggacgaaa 33372768  T
Q  136 agaggtattta 146  Q
    |||||||||||    
T  33372769 agaggtattta 33372779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 146
Target Start/End: Complemental strand, 11003844 - 11003735
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||         ||||||||||||||||||||||| |||||||||| |||| ||||    
T  11003844 ggaccaaaagtggaagaatctgaaattacaaggacaaaatctaagtctttttatttacagggactaaaaccggaattcggtaatattacaaggacaaaaa 11003745  T
Q  137 gaggtattta 146  Q
    ||||||||||    
T  11003744 gaggtattta 11003735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 19720433 - 19720336
Alignment:
Q  49 gaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    ||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19720433 gaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagagatattta 19720336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 30500155 - 30500048
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||          |||||||||||||||| ||||||||||||||||||||| |||    
T  30500155 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat--ttttttttacagggactaaaaccgaaattcgctaatattacagggatgaa 30500058  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  30500057 aagaggtatt 30500048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 49986639 - 49986530
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||| ||||||||||||||||| |||||||||||||||||||||    
T  49986639 gaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagtgactaaaaccggaattctctaatattacagggacgaaaa 49986540  T
Q  137 gaggtattta 146  Q
    ||||||||||    
T  49986539 gaggtattta 49986530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 14161986 - 14161874
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||         | ||| |||||||| ||||||||||||||||||||||||||    
T  14161986 gagggaccaaaagtggaagaatatgaaattacagggacataatctaaatctttttttttataggaactaaaactggaattcgctaatattacagggacga 14161887  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  14161886 aaagagatattta 14161874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 20853814 - 20853698
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||          ||||||  |||||||| ||||||||||||||||||||    
T  20853814 aatgagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatcttttttttttacagggtttaaaaccgaaattcgctaatattacaggg 20853715  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  20853714 acgaaaagaggtattta 20853698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 45003611 - 45003499
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||         | ||||||| ||||||||||| ||||||||||| |||||||    
T  45003611 gagggacaaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttatagggactgaaaccggaatttgctaatattacggggacga 45003512  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  45003511 aaagagatattta 45003499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 45970183 - 45970291
Alignment:
Q  39 accaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    |||||||||||||||||||||||||||||||||||||| ||||||          |||||||||||||||| ||||| ||||||||||||||||||||||    
T  45970183 accaaaagtggaagaatctgaaattacagggacaaaatttaaatcttttttttttacagggactaaaaccgaaattcactaatattacagggacgaaaag 45970282  T
Q  138 aggtattta 146  Q
    |||||||||    
T  45970283 aggtattta 45970291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 52552951 - 52553063
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||         ||||||||||||||  |||||||||||||||||| ||||||    
T  52552951 gagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgctaatattacaaggacga 52553050  T
Q  134 aaagaggtattta 146  Q
    ||||| |||||||    
T  52553051 aaagatgtattta 52553063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 9267238 - 9267349
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||           ||||||||||||| |||||||||||||||||||| ||||||    
T  9267238 gagggaccaaaagtagaagaatctgatattacagggacaaaatctaaaa-aatttatatacagggactaaaatcggaattcgctaatattacaaggacga 9267336  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  9267337 aaagaggtattta 9267349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 43572650 - 43572765
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||          ||||| ||||||||||||||| |  ||||||||||||    
T  43572650 aaatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaaat-tttttttttacaggaactaaaaccggaatttgtcaatattacaggg 43572748  T
Q  130 acgaaaagaggtattta 146  Q
    | |||||||||||||||    
T  43572749 atgaaaagaggtattta 43572765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 4204827 - 4204712
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||         ||||| |||||||| | |||||  |||||||||||||    
T  4204827 aaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaatc-ttttttttacaggaactaaaactgaaattcattaatattacaggg 4204729  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||| ||||    
T  4204728 acgaaaagaggtcttta 4204712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 27946187 - 27946251
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttagcctcttataa 157  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  27946187 acagggactaaaaccggaattcgctaatattactgggacgaaaagaggtatttaccctcttataa 27946251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 14171704 - 14171590
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||         ||||  | ||||| ||||||||||||||||||||||||    
T  14171704 aatgagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaatc-ttttttttacagaaattaaaatcggaattcgctaatattacaggga 14171606  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||| ||||||||    
T  14171605 cgaaaagtggtattta 14171590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 17649267 - 17649384
Alignment:
Q  28 taaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacag 127  Q
    ||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||          |||| |||||||||||||||||||| ||||||||    
T  17649267 taaaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaaatcttttttttc-caggaactaaaaccggaattcgctagtattacag 17649365  T
Q  128 ggacgaaaagaggtattta 146  Q
    || ||||||||||||||||    
T  17649366 ggtcgaaaagaggtattta 17649384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 21633011 - 21632904
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| |||         ||||||||||||     ||||||||||||||||||||||||    
T  21633011 gagggaccaaaagtgaaagaatctgaaattacagggacaacatctagatctttttttttacagggactaaa-----aattcgctaatattacagggacga 21632917  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  21632916 aaagaggtattta 21632904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 35995942 - 35996050
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||||||||||||| | |||||| ||||| |          ||||||||||||| ||||||||||||||||||||||||||||    
T  35995942 agggaccaaaagtggaagaatctgaaattactgagacaaattctaatt---tttttttacagggactaaaatcggaattcgctaatattacagggacgaa 35996038  T
Q  135 aagaggtattta 146  Q
    |||| |||||||    
T  35996039 aagatgtattta 35996050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 45003756 - 45003859
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||||||||         ||||| |||||||||| |||||||||||||||||||||    
T  45003756 aatgagggaccaaaagtggaagaatatgaaattatagggactaaatctaaatc-ttttttttacaggaactaaaaccgaaattcgctaatattacaggga 45003854  T
Q  131 cgaaa 135  Q
    |||||    
T  45003855 cgaaa 45003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 36990922 - 36991025
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||| |         |||||||||||||||| ||||||||||||||||||||||     
T  36990922 tgagggactaaaagtggaagaatctaaaattacagggacagaatctaaa-ctttttttttacagggactaaaaccgaaattcgctaatattacagggacc 36991020  T
Q  133 aaaag 137  Q
    |||||    
T  36991021 aaaag 36991025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 137
Target Start/End: Original strand, 37016362 - 37016465
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||| |         |||||||||||||||| ||||||||||||||||||||||     
T  37016362 tgagggactaaaagtggaagaatctaaaattacagggacagaatctaaa-ctttttttttacagggactaaaaccgaaattcgctaatattacagggacc 37016460  T
Q  133 aaaag 137  Q
    |||||    
T  37016461 aaaag 37016465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 49986782 - 49986710
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  49986782 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 49986710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 49986788 - 49986903
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||| |||||||||| | |||||||||||||           ||||| |||||||||| |||||||||||||||| |||    
T  49986788 aatgagggaccaaaagtggaagaatatgaaattacaag-acaaaatctaaatttcttttttttacaggaactaaaaccgaaattcgctaatattactggg 49986886  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  49986887 acgaaaagaggtattta 49986903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 15328724 - 15328834
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||          |  ||||||||||||  |||||||||||||||||| || ||    
T  15328724 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttttttttttattgggactaaaaccaaaattcgctaatattacagagatga 15328823  T
Q  134 aaagaggtatt 144  Q
    |||||||||||    
T  15328824 aaagaggtatt 15328834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 16722243 - 16722173
Alignment:
Q  3 gtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||| |||  || ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16722243 gtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 16722173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 27946165 - 27946114
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27946165 acagggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatt 27946114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17465492 - 17465561
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagg 68  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  17465492 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacagg 17465561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 35740931 - 35740829
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||| |||||||||||||| | |||||||||||||||||||||||           || ||||||||||||||||||||||||||||||||||||     
T  35740931 tgagggactaaaagtggaagaatttaaaattacagggacaaaatctaaa--cttttttttacggggactaaaaccggaattcgctaatattacagggacc 35740834  T
Q  133 aaaag 137  Q
    |||||    
T  35740833 aaaag 35740829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 17465630 - 17465742
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||| |||||||| || ||||||||||||||| |||||          |||| || |||||| | ||||||||||||||||| ||||||    
T  17465630 gagggaccaaaagtgaaagaatctaaagttacagggacaaaatttaaatattttattttacagagattaaaactgaaattcgctaatattacaaggacga 17465729  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  17465730 aaagaggtattta 17465742  T

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Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19112889 - 19112961
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||| ||||||||||||||||||||||||||  |||||||||||||||||||    
T  19112889 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggac 19112961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 35995802 - 35995878
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaa 75  Q
    |||||||||||||||| |||  || ||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  35995802 acgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaacatgaaattacagggacaaaa 35995878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 38283665 - 38283553
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| ||||||||||| ||| |||||||| ||| |||||||||||||          ||| ||||||||||||||||||| |||||||||||||| ||    
T  38283665 gagggatcaaaagtggaacaatatgaaattataggaacaaaatctaaatttttttttttacaaggactaaaaccggaattcgttaatattacagggatga 38283566  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  38283565 aaagagatattta 38283553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38283804 - 38283728
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaa 75  Q
    |||| ||||||||||| |||  |||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  38283804 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacacggacaaaa 38283728  T

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Target: chr3; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 52552806 - 52552695
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--nnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||           |||| |||||||| || |||| |||||||||| |||||||    
T  52552806 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctatttttttttacagagactaaaatcgaaatttgctaatattagagggacg 52552707  T
Q  133 aaaagaggtatt 144  Q
    ||||||| ||||    
T  52552706 aaaagagatatt 52552695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 35741847 - 35741957
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||| ||||| |||||||||| |||| ||||||||| |||||||| |         |||||||||||||| ||||||||||||||||||||||||     
T  35741847 tgagggactaaaagcggaagaatctaaaatgacagggacataatctaaa-ctttttttttacagggactaaaactggaattcgctaatattacagggacc 35741945  T
Q  133 aaaagaggtatt 144  Q
    ||||| ||||||    
T  35741946 aaaagtggtatt 35741957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 47575401 - 47575472
Alignment:
Q  6 agcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaa 75  Q
    ||||||||||| |||  ||||||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  47575401 agcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacagggacaaaa 47575472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 14262165 - 14262231
Alignment:
Q  6 agcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  14262165 agcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacaggga 14262231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9267099 - 9267171
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  | | |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  9267099 acgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggac 9267171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14171710 - 14171782
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  ||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  14171710 acgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaaatggaggaatctgaaattacagggac 14171782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 17465486 - 17465370
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagg-gacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||         ||||| ||||||| | |||||||||||||||| | ||    
T  17465486 aatgagagatcaaaaatggaagaatctgaaattacaggagacgaaatctaaatcattttttttacaggtactaaaatcagaattcgctaatattaaaagg 17465387  T
Q  130 acgaaaagaggtattta 146  Q
    || ||||||||||||||    
T  17465386 acaaaaagaggtattta 17465370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20853820 - 20853888
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    ||||||| |||||||| |||  |||||||||||||||||||||||||||||| |||||| |||||||||    
T  20853820 acgtaagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctaaaattacag 20853888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21633150 - 21633078
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||| |||||||| |||  |||||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  21633150 acgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattacaaggac 21633078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45970169 - 45970097
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||| | |||  || |||||||||||||||||||||||||||  |||||||||||||||||||    
T  45970169 acgtaagcagaatccgcatacatgacacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggac 45970097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 3425973 - 3426021
Alignment:
Q  96 gggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  3425973 gggactaaaaccggaattcgctaatattacaggggccaaaagaggtatt 3426021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 38283809 - 38283861
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38283809 aaataagggatcaaaagtggaagaatctgaaattatagggacaaaatctaaat 38283861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45003750 - 45003679
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||||||||||||||| |||  ||||| ||||||||||||| |||||||||| |||| ||||||||||||||    
T  45003750 acgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatatgaaattacaggga 45003679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 3424830 - 3424779
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  3424830 acagggaccaaaaccggaaatcgctaatattacagggaccaaaagaggtatt 3424779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 14162104 - 14162053
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  14162104 atggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggac 14162053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4204832 - 4204900
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    |||| ||||||||||| |||  ||||||||||||||||||||||||||||||  ||| |||||||||||    
T  4204832 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatatgaaattacag 4204900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 15328575 - 15328466
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||  ||| ||||||||| |||||||||||||||||||||||| |          ||||||||||||| || ||||  ||||||||||||| ||||    
T  15328575 gagggacacaaactggaagaatatgaaattacagggacaaaatctaatt---tttttttacagggactaaaaacgaaatttactaatattacaggaacga 15328479  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  15328478 aaagaggtattta 15328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 15328695 - 15328642
Alignment:
Q  18 atatggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  15328695 atatgacacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggac 15328642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30500165 - 30500237
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  |||||||||||||||||||||||||||| | |||| |||||||||| ||||    
T  30500165 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgaaggaatttgaaattacatggac 30500237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 24490242 - 24490294
Alignment:
Q  94 cagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| || ||||||    
T  24490242 cagggactaaaaccggaattcactaatattacagggaggaaaaaagatattta 24490294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 32998397 - 32998497
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||||||           ||||| ||||| ||| ||||||||||||||||||||||| |    
T  32998397 gagggactaaaagtggaggaatctgaaattacagggacagaatctaaa--cttttttttacaggaactaacaccagaattcgctaatattacagggacca 32998494  T
Q  134 aaa 136  Q
    |||    
T  32998495 aaa 32998497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 45058755 - 45058803
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 83  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  45058755 agggatcaaaaatggaagaatctgaaattacagagacaaaatctaaatc 45058803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 52552821 - 52552888
Alignment:
Q  6 agcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||| |||  || ||||||||||||||||||||||||| | |||| |||||||||||||||    
T  52552821 agcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacagggac 52552888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 5800838 - 5800787
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||| ||||||||||||||||||| |||| |||| |||||||||||||||    
T  5800838 atggcatgtaaaatgagggaccaaaaatggaggaatttgaaattacagggac 5800787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33372659 - 33372592
Alignment:
Q  1 acgtaagcagaatctgaata-tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    |||| ||||||||||| ||| || |||||||||||||||| |||||||||| |||| |||||||||||    
T  33372659 acgtcagcagaatctgcatactgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacag 33372592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 43572620 - 43572573
Alignment:
Q  24 cacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||||    
T  43572620 cacgtaaaatgagggaccaaaagtggagtaatttgaaattacagggac 43572573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 1068912 - 1068954
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaat 76  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  1068912 gagggactaaaagtggaagaatctgaaatgacagggacaaaat 1068954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 47575539 - 47575646
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    |||||||||| ||| ||||||||||||||| |||||||||| |||          ||||||||||||||| |||||| || ||||||| | |||||| ||    
T  47575539 gaccaaaagttgaaaaatctgaaattacagagacaaaatct-aatttttttttttacagggactaaaaccagaattcactcatattacggagacgaatag 47575637  T
Q  138 aggtattta 146  Q
    |||||||||    
T  47575638 aggtattta 47575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 9e-39; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 10108485 - 10108373
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  10108485 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacga 10108386  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  10108385 aaagaggtattta 10108373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 43851782 - 43851668
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  43851782 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttgttt-acagggactaaaaccggaattcgctaatattacaggga 43851684  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  43851683 cgaaaagaggtattta 43851668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 10108634 - 10108743
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||||||||    
T  10108634 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaatttgctaatattacagggacgaa 10108733  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  10108734 aagaggtatt 10108743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 14820558 - 14820667
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||| ||    
T  14820558 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggactaa 14820657  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  14820658 aagaggtatt 14820667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 30789773 - 30789882
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||  |||||||||||||||||||||    
T  30789773 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaatttactaatattacagggacgaaaa 30789872  T
Q  137 gaggtattta 146  Q
    ||||||||||    
T  30789873 gaggtattta 30789882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 5554983 - 5554872
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||         ||||||||||||||||||||||||||||||||||||||||||    
T  5554983 agggaccaaaagtggaagaatatgaaattatagggacaaaatctgaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaa 5554884  T
Q  135 aagaggtattta 146  Q
    ||||||||||||    
T  5554883 aagaggtattta 5554872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 7689783 - 7689898
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||         ||| ||||||||| ||||||||||||||||||||||||    
T  7689783 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttttacacggactaaaatcggaattcgctaatattacaggga 7689882  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  7689883 cgaaaagaggtattta 7689898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 10171403 - 10171518
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  10171403 aatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaatagttttttttacagggactaaaaccggaattcgctaatattacaggga 10171502  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||| ||||||||    
T  10171503 cgaaaagcggtattta 10171518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 14820409 - 14820298
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||         ||||| |||||||||||||||||||||||||||||||||||    
T  14820409 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttt-acaggaactaaaaccggaattcgctaatattacagggacga 14820311  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  14820310 aaagaggtattta 14820298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 21148051 - 21147941
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||| |    
T  21148051 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacagggacaa 21147952  T
Q  134 aaagaggtatt 144  Q
    |||||||||||    
T  21147951 aaagaggtatt 21147941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 5555133 - 5555239
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||         |||| ||||||||||| |||||||||||||||||||||||||    
T  5555133 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacgaa 5555232  T
Q  135 aagaggt 141  Q
    |||||||    
T  5555233 aagaggt 5555239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 42113103 - 42112993
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||| |||||||| |||||||||||||| ||||||||||         ||||||||||||| |||||||||||||||||||||||    
T  42113103 aaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaatctttttttt-acagggactaaaatcggaattcgctaatattacaggg 42113005  T
Q  130 acgaaaagaggt 141  Q
    ||||||||||||    
T  42113004 acgaaaagaggt 42112993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 7689638 - 7689527
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||         ||| |||||||| ||| ||||||||||||||||||||||||    
T  7689638 gagggaccaaaagtggaagaatctgaaattacaaggacaaa-tctaaatctttttatttacaaggactaaagccgaaattcgctaatattacagggacga 7689540  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  7689539 aaagaggtattta 7689527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 30789626 - 30789519
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||||||||||         ||||||||||||| |||||||||||||||||||||||    
T  30789626 aaatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaaatctttttttt-acagggactaaaatcggaattcgctaatattacaggg 30789528  T
Q  130 acgaaaaga 138  Q
    |||||||||    
T  30789527 acgaaaaga 30789519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 21148199 - 21148311
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||| |||||||||||||| |||||||||| ||||||||||||| |          |||||||||||||||||||||| |||||||||||| |||||    
T  21148199 gagggactaaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttacagggactaaaaccggaattcactaatattacagagacga 21148298  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  21148299 aaagaggtattta 21148311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 26136793 - 26136690
Alignment:
Q  41 caaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagagg 140  Q
    ||||| |||||||||||||||||||| |||||||||||||||          |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  26136793 caaaattggaagaatctgaaattacaaggacaaaatctaaatttttttttttacagggactaaaactggaattcgctaatattacaggaacgaaaagagg 26136694  T
Q  141 tatt 144  Q
    ||||    
T  26136693 tatt 26136690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 17623005 - 17622893
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||||||         |||||||||||||| | ||||||||||||||||| |||    
T  17623005 aatgagggaccaaaagtggaagaatctaaaattacaga-acaaaatctaaatcttttttt--acagggactaaaactgaaattcgctaatattacaagga 17622909  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  17622908 cgaaaagaggtattta 17622893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 42606019 - 42606128
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||         |||  |||||||||| ||||||||||||||||||||||| ||||    
T  42606019 ggaccaaaagtggaagaatttgaaattacggggacaaaatctaaatctttttttttacattgactaaaaccagaattcgctaatattacagggacaaaaa 42606118  T
Q  137 gaggtattta 146  Q
    ||| ||||||    
T  42606119 gagatattta 42606128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 18044092 - 18044202
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| |||||| | ||||||||||||||||||||||||||| ||| |          ||| |||||||||||||||||||||||||||||||||||||    
T  18044092 gagggatcaaaagcgaaagaatctgaaattacagggacaaaatataatt--atttttttacatggactaaaaccggaattcgctaatattacagggacga 18044189  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  18044190 aaagaggtattta 18044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 26136945 - 26137059
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnac-agggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |          || |||||||||||| | ||||| ||||||||||||||    
T  26136945 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaatt--ttttttttactagggactaaaactgaaattcactaatattacaggg 26137042  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||| ||||||||    
T  26137043 acgaaaagtggtattta 26137059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 17623154 - 17623261
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||         ||||| ||||||||| ||||| |||||||||||||||| ||||||    
T  17623154 gaccaaaagtggaagaatttgaaattacaaggacaaaatctaaatc-ttttttttacaggcactaaaaccagaattggctaatattacagggatgaaaag 17623252  T
Q  138 aggtattta 146  Q
    |||||||||    
T  17623253 aggtattta 17623261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 22494644 - 22494757
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||         || || ||||||||| |||||| || ||||||||||||    
T  22494644 aatgagggaccaaaagtggaagaatttgaaattacagggacaaattctaaatctctttttttac-ggaactaaaaccagaattcactgatattacaggga 22494742  T
Q  131 cgaaaagaggtattt 145  Q
    |||| ||||||||||    
T  22494743 cgaagagaggtattt 22494757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 43481581 - 43481690
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||||          |||| |||||||||||||||||||||||||||||| ||||||||    
T  43481581 gaccaagagtggaagaatttgaaattacagggacaaaatttaaatcttttttttttacagagactaaaaccggaattcgctaatattacagtgacgaaaa 43481680  T
Q  137 gaggtattta 146  Q
    ||| ||||||    
T  43481681 gagatattta 43481690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 2583435 - 2583323
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||||         ||| | ||||||| || ||||||||||||||||||| | ||    
T  2583435 gagggatcaaaagtagaagaatccgaaattacagggacaaaatctaaatcttttattttacaagaactaaaatcgaaattcgctaatattacaggaatga 2583336  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  2583335 aaagaggtattta 2583323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 14767621 - 14767511
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||          |  ||||||||||||  |||||||||||||||||| || ||    
T  14767621 agggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttttttttttattgggactaaaaccaaaattcgctaatattacagagatga 14767522  T
Q  134 aaagaggtatt 144  Q
    |||||||||||    
T  14767521 aaagaggtatt 14767511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 17623032 - 17623083
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17623032 atggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 17623083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 2583580 - 2583696
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||          |||||| |||||||  |||||||||||||||||  ||    
T  2583580 aatgaggaaccaaaagtggaagaatctgaaattatagggacaaaatttaaatcttttttttttacagggcctaaaactagaattcgctaatattacgagg 2583679  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||| ||||||    
T  2583680 acgaaaagagatattta 2583696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7689777 - 7689705
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  7689777 acgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggac 7689705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10108624 - 10108552
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  10108624 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggac 10108552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42606007 - 42605939
Alignment:
Q  1 acgtaagcagaatctgaat--atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    ||||||||||||| || ||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42606007 acgtaagcagaatttgcattcatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacag 42605939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 26532901 - 26532807
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatatta 124  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||          ||| ||||||||||||||||||||||||||||    
T  26532901 aatgagggatcaaaagtggaaaaatttgaaattacagggacaaaatctaaatcttttttttttacatggactaaaaccggaattcgctaatatta 26532807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 35367525 - 35367413
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||| ||||||| || ||||||||||||||||||||||||||||| |           ||||||| ||||||||||||||||||||||| |||||||     
T  35367525 gagggatcaaaagtcga-gaatctgaaattacagggacaaaatctaattttattttttttacagggattaaaaccggaattcgctaatattgcagggacc 35367427  T
Q  133 aaaagaggtattta 146  Q
    ||||||||||||||    
T  35367426 aaaagaggtattta 35367413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 20877069 - 20877118
Alignment:
Q  95 agggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20877069 agggactaaaaccggaattcgctcatattacagggaccaaaagaggtatt 20877118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22494638 - 22494566
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||| || |||  || ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  22494638 acgtaagcagaatttgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattactgggac 22494566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26136939 - 26136867
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||| |||| |||||||||| |||| ||||    
T  26136939 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaagtacaaggac 26136867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 42113247 - 42113356
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| ||||||||||||||| |||||||| ||||||| ||||||| |          ||||| |||||||||| |||||| |||||||||||||||||    
T  42113247 gagggatcaaaagtggaagaatttgaaattaaagggacataatctaatt---tttttttacaggaactaaaaccgaaattcgttaatattacagggacga 42113343  T
Q  134 aaagaggtattta 146  Q
    ||||| |||||||    
T  42113344 aaagatgtattta 42113356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 136
Target Start/End: Complemental strand, 38726803 - 38726700
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||||           | ||||||||||||||||||| ||| |||||||||||||     
T  38726803 tgagggatctaaagtggaagaatctgaaattacaaggacaaaatctaaacttttttttttatagggactaaaaccggaatttgctcatattacagggacc 38726704  T
Q  133 aaaa 136  Q
    ||||    
T  38726703 aaaa 38726700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 42605868 - 42605759
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||| |          ||||  ||||||| ||||||||| |||||||||| ||||||    
T  42605868 gagggaccaaaagtggaagaatatgaaattacagggataaaatctaatt--ttttttttacagaaactaaaatcggaattcgttaatattacatggacga 42605771  T
Q  134 aaagaggtattt 145  Q
    ||||| ||||||    
T  42605770 aaagaagtattt 42605759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 21144764 - 21144865
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||| |||||| |||| |||| ||||||||||||||| |||||||||||||||          | ||||||||||| ||||||||| |||||||||||||    
T  21144764 aaataagggacgaaaaatggaggaatctgaaattacaaggacaaaatctaaattttttattttatagggactaaaatcggaattcgttaatattacaggg 21144863  T
Q  130 ac 131  Q
    ||    
T  21144864 ac 21144865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 14767650 - 14767703
Alignment:
Q  18 atatggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  14767650 atatgacacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggac 14767703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 14767770 - 14767879
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||  ||| ||||||||| |||||||||||||||||||||||| |          ||||||||||||| || ||||  ||||||||||||| ||||    
T  14767770 gagggacacaaactggaagaatatgaaattacagggacaaaatctaatt---tttttttacagggactaaaaacgaaatttactaatattacaggaacga 14767866  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  14767867 aaagaggtattta 14767879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 39888597 - 39888486
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    ||||||| |||||| |||||||||| |||| | ||||||| |||||||||          |||||||||||||||| | |||||| |||||| ||||||     
T  39888597 tgagggatcaaaagcggaagaatctcaaatgatagggacagaatctaaattattatttttacagggactaaaaccgaatttcgcttatattatagggacc 39888498  T
Q  133 aaaagaggtatt 144  Q
    ||||||||||||    
T  39888497 aaaagaggtatt 39888486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 43851793 - 43851860
Alignment:
Q  6 agcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||| |||  || |||||||||||||||| |||||||||| |||| |||||||||||||||    
T  43851793 agcagaatctgcatacatgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggac 43851860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 1949708 - 1949657
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    ||||| ||||||||||||||||| | ||||||||||||| ||||||||||||    
T  1949708 acaggcactaaaaccggaattcgatcatattacagggaccaaaagaggtatt 1949657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 2583553 - 2583502
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||| |||||||||||||| ||||||||| |||| |||||||||||||||    
T  2583553 atggcatgtaaaatgagggactaaaagtggaggaatttgaaattacagggac 2583502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 5555102 - 5555051
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||||||||||| | ||||  ||||||||||||||    
T  5555102 atggcacgtaaaatgagggaccaaaagtgaaggaattcgaaattacagggac 5555051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 30789652 - 30789703
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||||| ||||    
T  30789652 atggcacgtaagatgagggatcaaaagtggaggaatctgaaattacaaggac 30789703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 40487736 - 40487787
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||| ||||||    
T  40487736 acagggactaaaactggaattcgctaatattacaaggaccaaaagtggtatt 40487787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 21148080 - 21148126
Alignment:
Q  18 atatggcacgtaaaatgagggaccaaaagtggaagaatctgaaatta 64  Q
    ||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  21148080 atatgacacgtaaaatgagggaccaaaagtggaggaatttgaaatta 21148126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 20875812 - 20875703
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||| ||||||||||||||||||||| | ||||||| |||| |||           ||| |||||||||||| |||| ||| |||||||||||||     
T  20875812 tgagggactaaaagtggaagaatctgaaataatagggacataatccaaa--cttttttttacaaggactaaaaccgaaatttgctcatattacagggacc 20875715  T
Q  133 aaaagaggtatt 144  Q
    ||||||||||||    
T  20875714 aaaagaggtatt 20875703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 137
Target Start/End: Complemental strand, 40486744 - 40486641
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||| |||||||||| ||||| |||||||| ||||| |||||||| |          |||||||||||| ||||||||| |||||||||||||||     
T  40486744 tgagggactaaaagtggaataatctaaaattacaaggacagaatctaaa-ctttttttttgcagggactaaaatcggaattcgttaatattacagggacc 40486646  T
Q  133 aaaag 137  Q
    |||||    
T  40486645 aaaag 40486641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 21144695 - 21144598
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctg--aaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattac 125  Q
    ||||||| |||||||| |||||||||||   ||||||| ||||||||||||| ||          |||||||||||||||||||||| ||||||||||    
T  21144695 aaatgagagaccaaaaatggaagaatctataaaattaccgggacaaaatctatattttttttgttacagggactaaaaccggaattctctaatattac 21144598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 22494497 - 22494454
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 80  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||    
T  22494497 ggaccaaaaatggaagaatatgaaattacaggaacaaaatctaa 22494454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 44162782 - 44162731
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 81  Q
    ||||||| |||||||||| |||||||||||||| ||||| ||||||| ||||    
T  44162782 aaatgagagaccaaaagtagaagaatctgaaatgacaggaacaaaatgtaaa 44162731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26532907 - 26532972
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaatta 64  Q
    |||| ||||||||||| |||  || ||||||||||||||||  ||||||||| |||||||||||||    
T  26532907 acgtcagcagaatctgcatacatgacacgtaaaatgagggattaaaagtggaggaatctgaaatta 26532972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 43481459 - 43481505
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattaca 66  Q
    ||||||||||||| |||||| |||||||||| |||||| ||||||||    
T  43481459 atggcacgtaaaacgagggatcaaaagtggaggaatctaaaattaca 43481505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 39889628 - 39889673
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    ||||||||||||||||||||||||||   ||||||| |||||||||    
T  39889628 ggaccaaaagtggaagaatctgaaatggtagggacataatctaaat 39889673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42113108 - 42113180
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  || ||| |||||||||||||||||||||||  ||| |||||||| ||||||    
T  42113108 acgtcagcagaatctgcatacatgacacataaaatgagggaccaaaagtggagtaatatgaaattatagggac 42113180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 28977734 - 28977686
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    |||||||||||||||||| ||| |||||| | ||||||| |||||||||    
T  28977734 gagggaccaaaagtggaaaaatatgaaatgatagggacagaatctaaat 28977686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 9e-39; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 18462400 - 18462276
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  18462400 gagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatctttttttt-acagggactaaaaccggaattcgctaatattacagggacga 18462302  T
Q  134 aaagaggtatttagcctcttataaat 159  Q
    ||||||||||||| ||| ||||||||    
T  18462301 aaagaggtatttacccttttataaat 18462276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 39711332 - 39711447
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||         ||||||||||||||| ||||||||||||||||||||||    
T  39711332 aatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatattacaggga 39711431  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  39711432 cgaaaagaggtattta 39711447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 39826312 - 39826421
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||| ||||||||||||||||| |||||||||    
T  39826312 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccgaaattcgctaatattacatggacgaaaa 39826411  T
Q  137 gaggtattta 146  Q
    ||||||||||    
T  39826412 gaggtattta 39826421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 17606572 - 17606679
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||    
T  17606572 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatcttttttt--acagggactaaaaccggaattcgctaatattacagggacgaa 17606669  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  17606670 aagaggtatt 17606679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 4907080 - 4906965
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||  |||||| |||||||||||||||    
T  4907080 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaactagaattcactaatattacaggga 4906981  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  4906980 cgaaaagaggtattta 4906965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 33628808 - 33628693
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||         || |||||||||||| ||||||||||||||||||||||    
T  33628808 aatgagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaaatctttttttttacggggactaaaaccagaattcgctaatattacaggga 33628709  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  33628708 cgaaaagaggtattta 33628693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 4907225 - 4907337
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||| ||    
T  4907225 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacagggactaaaactggaattcgctaatattacagggagga 4907324  T
Q  134 aaagaggtattta 146  Q
    ||| || ||||||    
T  4907325 aaatagatattta 4907337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 52058271 - 52058383
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||         ||||| |||||||||  ||||||||||||||||||||||||    
T  52058271 gagggaccaaaagtggaagaatctgaaattacagggacataatctaaatctttttttctacaggaactaaaaccaaaattcgctaatattacagggacga 52058370  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  52058371 aaagaggtattta 52058383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 24467743 - 24467632
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||  ||||||||||||||||||||||||||    
T  24467743 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-ttttttttacagggactaaaattggaattcgctaatattacagggacga 24467645  T
Q  134 aaagaggtattta 146  Q
    ||||| |||||||    
T  24467644 aaagatgtattta 24467632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 39826168 - 39826053
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||         ||||||||||||| || ||||||||||||||| | |||    
T  39826168 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcgaaattcgctaatattatatgga 39826069  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  39826068 cgaaaagaggtattta 39826053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 24467886 - 24467999
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||| ||||||||||| |     
T  24467886 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcactaatattacatg- 24467984  T
Q  130 acgaaaagaggtattta 146  Q
      |||||||||||||||    
T  24467985 --gaaaagaggtattta 24467999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 33628953 - 33629063
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |          ||||||||||||||||||||||||||||||||||||||| |    
T  33628953 gagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaattttttttttttacagggactaaaaccggaattcgctaatattacagggacaa 33629052  T
Q  134 aaagaggtatt 144  Q
    |||||||||||    
T  33629053 aaagaggtatt 33629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 52058130 - 52058014
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||         ||||  ||||||||||||||||| |||||||||| ||    
T  52058130 aaatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaatctttttttttacagaaactaaaaccggaattcgttaatattacaagg 52058031  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  52058030 acgaaaagaggtattta 52058014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 17606427 - 17606307
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn----acagggactaaaaccggaattcgctaatattac 125  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||             ||||||||||||| |||||||||||||||||||    
T  17606427 aaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatctttttttttttttacagggactaaaatcggaattcgctaatattac 17606328  T
Q  126 agggacgaaaagaggtattta 146  Q
    |||||||||||||||||||||    
T  17606327 agggacgaaaagaggtattta 17606307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 145
Target Start/End: Original strand, 18462543 - 18462658
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||         ||| | ||||||||||||||| |||||||||||||||    
T  18462543 aaatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaaatctttttttatacaagaactaaaaccggaatttgctaatattacaggg 18462642  T
Q  130 acgaaaagaggtattt 145  Q
    | ||||||||||||||    
T  18462643 aggaaaagaggtattt 18462658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 30299491 - 30299606
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||         ||||| |||||||||| |||| ||||||||||||| ||    
T  30299491 aatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttacaggaactaaaaccgaaatttgctaatattacagaga 30299590  T
Q  131 cgaaaagaggtattta 146  Q
    |||||| |||||||||    
T  30299591 cgaaaataggtattta 30299606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 8292919 - 8292807
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||||||||         ||||||||||||||||| ||||||||||| |||||||||||    
T  8292919 gaggaaccaaaagtggaagaatatgaaatttcagggacaaaatctaaatcttttattttacagggactaaaaccgggattcgctaatagtacagggacga 8292820  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  8292819 aaagagttattta 8292807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 8293067 - 8293183
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||          ||||||||||||||  ||||||| |||||||| ||||    
T  8293067 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaactagaattcgttaatattataggg 8293166  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  8293167 acgaaaagaggtattta 8293183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 39711187 - 39711077
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||||  |||||    
T  39711187 gagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttt-acagggactaaaaccggaattcgctaatattaca-agacga 39711090  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  39711089 aaagaggtattta 39711077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 30299342 - 30299235
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    |||||||||||||||||| |||||||||||||||||||||||||||         ||| ||||||||| || | ||||||||||||||||||||||||||    
T  30299342 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttaca-ggactaaaatcgaagttcgctaatattacagggacgaaaag 30299244  T
Q  138 aggtattta 146  Q
    |||||||||    
T  30299243 aggtattta 30299235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 34749368 - 34749480
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||         ||| ||||||||| ||||||||| ||||||||||| ||| |    
T  34749368 gaggtaccaaaagtggaagaatctgaaattacagggataaaatctaaatctttttttttacaaggactaaaatcggaattcgataatattacagagacaa 34749467  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  34749468 aaagaggtattta 34749480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 39970909 - 39971021
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||          |||||||||||||||| |||||| |||||||||| ||||||    
T  39970909 agggaccaaaagtggaaggatctaaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccgaaattcgttaatattacatggacga 39971008  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  39971009 aaagaggtattta 39971021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 29696671 - 29696568
Alignment:
Q  42 aaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagaggt 141  Q
    |||||||||||||| ||||||||| |||||||||||||||||         |||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  29696671 aaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttt-acagagactaaaaccgaaattcgctaatattacagggacgaaaagaggt 29696573  T
Q  142 attta 146  Q
    |||||    
T  29696572 attta 29696568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 29696818 - 29696932
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||          |||| |||||||||||||||||||||||||||||   |    
T  29696818 aatgagggaccaaaagtggaagaatctgaaattacatggacaaaatct-aatttttttttttacagtgactaaaaccggaattcgctaatattacataaa 29696916  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  29696917 cgaaaagaggtattta 29696932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 34749255 - 34749141
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||||         | ||||||||||| | ||||||||||||||||||||||    
T  34749255 aatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatc-ttttttttatagggactaaaatcagaattcgctaatattacaggga 34749157  T
Q  131 cgaaaagaggtattta 146  Q
     ||||||| |||||||    
T  34749156 tgaaaagatgtattta 34749141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 42510133 - 42510034
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||||||||    
T  42510133 aaatgagggactaaaagtggaagaatatgaaattacagggacaaaatctaaat-tatttttttacagggattaaaaccggaattcgctaatattacaggg 42510035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 48072220 - 48072336
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||  |||||||||||||||| |||||||||||||||| |||||||||          ||| |||||||||||||||||| |||||||||||  |    
T  48072220 aaatgaggacccaaaagtggaagaatatgaaattacagggacataatctaaatatttttttttacaaggactaaaaccggaattcactaatattacaatg 48072319  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  48072320 acgaaaagaggtattta 48072336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 30252158 - 30252275
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||||         ||||||||||||||| |||||||||||||||| |||||    
T  30252158 aatgagggatcaaaaatggaagaatatgaaattacggggacaaaatctaaatctttatttttacagggactaaaaccagaattcgctaatattataggga 30252257  T
Q  131 c--gaaaagaggtattta 146  Q
    |  | |||||||||||||    
T  30252258 caaggaaagaggtattta 30252275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 48072076 - 48071966
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||||||||         ||||| ||||||||| |||||||||||||||||| | ||||    
T  48072076 gagggagcaaaagtggaataatatgaaattacagggacaaaatctaaatcttttttattacaggaactaaaaccagaattcgctaatattacatgaacga 48071977  T
Q  134 aaagaggtatt 144  Q
    |||||| ||||    
T  48071976 aaagagatatt 48071966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 20995932 - 20996040
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||         ||| ||||||||||   |||||||||||||||||||||| ||    
T  20995932 agggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatc-ttttttttacatggactaaaactaaaattcgctaatattacagggacaaa 20996030  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  20996031 aagaggtatt 20996040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 18342279 - 18342392
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||||| |||||||||||||| |||||||||| | | ||||| |||||          |||||||||||||||| |||||||||||||||||||||    
T  18342279 aatgagggactaaaagtggaagaatatgaaattacaagaataaaatttaaat--ttttttttacagggactaaaaccgaaattcgctaatattacaggga 18342376  T
Q  131 cgaaaagaggtattta 146  Q
    |||||| |||||||||    
T  18342377 cgaaaaaaggtattta 18342392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 20995754 - 20995692
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttagcctcttat 155  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| ||||    
T  20995754 acagggactaaaaccggaattcgctaatattacagagatgaaaagaggtatttaccctattat 20995692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39711326 - 39711254
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||| || |||  |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  39711326 acgtaagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatccgaaattacagggac 39711254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 39970764 - 39970648
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||          |||| || |||||  | |||||| |||||||||| ||    
T  39970764 aatgagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaatcttttttttttacagagattaaaattgaaattcgttaatattacatgg 39970665  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  39970664 acgaaaagaggtattta 39970648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 43539462 - 43539350
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||         ||| ||||||||| ||||||| |||||| ||||| ||| ||    
T  43539462 gagggaccaaaagtggaacaatataaaattacagggacaaaatctaaatcgttttttttacaaggactaaaatcggaatttgctaatcttacatggatga 43539363  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  43539362 aaagagatattta 43539350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 17501993 - 17502095
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||||||| |         | |||||||||||||||||||||||||||||||| |||| |    
T  17501993 gagggactaaaagtggaggaatctgaaattacagggacagaatctaaa-ctttttttttatagggactaaaaccggaattcgctaatattacaaggacca 17502091  T
Q  134 aaag 137  Q
    ||||    
T  17502092 aaag 17502095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 27039753 - 27039643
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    ||||||||||| ||||||||||||| | |||  |||||||||||||||| |         ||| |||| |||||||||||||||| ||||||||||||||    
T  27039753 tgagggaccaatagtggaagaatcttatattgtagggacaaaatctaaa-ctttttttttacaaggaccaaaaccggaattcgctcatattacagggacg 27039655  T
Q  133 aaaagaggtatt 144  Q
    ||||||||||||    
T  27039654 aaaagaggtatt 27039643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29696812 - 29696745
Alignment:
Q  1 acgtaagcagaatctgaatatggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| ||   |||||||||||||||||||||||||||| |||||||||| |||||||||    
T  29696812 acgtaagcagaatctgcat---gcacgtaaaatgagggaccaaaagtggaggaatctgaaaatacagggac 29696745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34749261 - 34749332
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    ||||||||||||| || |||  ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  34749261 acgtaagcagaatttgcatacatggcatgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 34749332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 42510143 - 42510210
Alignment:
Q  6 agcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||| |||  |||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  42510143 agcagaatctgcatacatggcacgtgaaatgagggaccaaaagtggaggaatctgaaattacagggac 42510210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48072215 - 48072144
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||| ||||||||||| |||  || ||||||||||||||||||||||||||| |||||||||||||||||||    
T  48072215 acgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 48072144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 17606541 - 17606490
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  17606541 atggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggac 17606490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 33628835 - 33628886
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  33628835 atggcacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggac 33628886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13229985 - 13229916
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagg 68  Q
    |||||||||||||||| |||  || |||| |||||||||||||||||||||| |||||||||||||||||    
T  13229985 acgtaagcagaatctgcatacatgacacgcaaaatgagggaccaaaagtggaggaatctgaaattacagg 13229916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 39970791 - 39970837
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattaca 66  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  39970791 atggcacgtaaaatgagggaccaaaagtggatgaatctgaaattaca 39970837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 43539611 - 43539720
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||| ||||||||| |||||||||| |||||||||| |  |          ||||| ||||||||||||||| ||||||||||||||||||||    
T  43539611 agggaccaaaactggaagaatttgaaattacatggacaaaatcaatttttttttttttacaggaactaaaaccggaatttgctaatattacagggacgaa 43539710  T
Q  135 aagaggtatt 144  Q
    ||||| ||||    
T  43539711 aagagctatt 43539720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30299485 - 30299418
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattaca 66  Q
    ||||||| |||||||| |||  |||||| ||||||||||||||||||||||| |||||||||||||||    
T  30299485 acgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattaca 30299418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39826174 - 39826245
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||| ||||||||||| |||  ||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  39826174 acgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatatgaaattacaggga 39826245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 4907107 - 4907158
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  4907107 atggcatgtaaaatgagggactaaaagtggatgaatctgaaattacagggac 4907158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 42510341 - 42510388
Alignment:
Q  97 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  42510341 ggactaaaaccggaattcgctaatattacagggaccaaaagtggtatt 42510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 7473911 - 7473862
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatcta 79  Q
    |||||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  7473911 aaatgagggaccaaaagtggaagaatatgaaattacagagacataatcta 7473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 13229991 - 13230107
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagg-gactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||  |||||||| || | |||||||||| |          ||| | ||||||||||| |||||||||||||| ||| |    
T  13229991 aatgagggaccaaaagtggaagaagatgaaattaaagaggcaaaatctaattttttttttttacaagagactaaaaccgaaattcgctaatatttcagag 13230090  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  13230091 acgaaaagaggtattta 13230107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 16294206 - 16294302
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattaca 126  Q
    |||| |||||||||||||||| |||| |||||||||| |||||||||||||||          ||||||||||||| || |||| ||||||||||||    
T  16294206 aaataagggaccaaaagtggaggaatatgaaattacaaggacaaaatctaaattttttattttacagggactaaaatcgaaatttgctaatattaca 16294302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 37236772 - 37236723
Alignment:
Q  95 agggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  37236772 agggactaaaaccggaattcgctcatattacagggaccaaaagagatatt 37236723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 17500825 - 17500782
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  17500825 acagagactaaaaccggaattcgctaatattacagggaccaaaa 17500782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 43400809 - 43400758
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||||| |||||||||||||||| |||||| || ||||||||||||||||    
T  43400809 acagggaccaaaaccggaattcgctcatattatagagacgaaaagaggtatt 43400758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 43539576 - 43539530
Alignment:
Q  24 cacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||||||||||||| |||||||||||| |||| ||||||||||||||    
T  43539576 cacgtaaaatgaggtaccaaaagtggaggaatttgaaattacaggga 43539530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20995922 - 20995851
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  ||||||||||| ||||||||||||||||||  ||| |||||||||||||||    
T  20995922 acgtcagcagaatctgcatacatggcacgtaaa-tgagggaccaaaagtggagaaatttgaaattacagggac 20995851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 52058140 - 52058207
Alignment:
Q  6 agcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||| |||  || |||||||||||||||||||||||||||  ||| |||||||||| ||||    
T  52058140 agcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggagtaatatgaaattacaaggac 52058207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 7473937 - 7473988
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||| |||||| ||| |||||||||| ||||||||||||||| ||||    
T  7473937 atggcacgtgaaatgatggatcaaaagtggaggaatctgaaattacaaggac 7473988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 24467860 - 24467810
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||| |||||| |||||  |||||||||||||||||||    
T  24467860 atggcacgtaaaatgagg-accaaatgtggagtaatctgaaattacagggac 24467810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 26271207 - 26271258
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||||| ||||||| | |||||||||||||| ||||| ||||||||||||    
T  26271207 acagggaccaaaaccgaatttcgctaatattactgggactaaaagaggtatt 26271258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 215191 - 215223
Alignment:
Q  50 aagaatctgaaattacagggacaaaatctaaat 82  Q
    ||||||||||||||||| |||||||||||||||    
T  215191 aagaatctgaaattacaaggacaaaatctaaat 215223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 9619095 - 9618983
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| ||||||    
T  9619095 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttgtttttacagggactaaaaccggaattcgctaatattacatggacga 9618996  T
Q  134 aaagaggtattta 146  Q
    ||| |||||||||    
T  9618995 aaataggtattta 9618983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 38574231 - 38574343
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||||||||||| |||||||||||||||||||||||||    
T  38574231 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccagaattcgctaatattacagggacga 38574330  T
Q  134 aaagaggtattta 146  Q
    ||| |||||||||    
T  38574331 aaaaaggtattta 38574343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 46046687 - 46046798
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  46046687 gagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacga 46046786  T
Q  134 aaagaggtattta 146  Q
    ||| |||||||||    
T  46046787 aaa-aggtattta 46046798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 9516728 - 9516613
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||    
T  9516728 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaaccggaattcgctaatattacaggga 9516629  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||| ||||||    
T  9516628 cgaaaagagatattta 9516613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 34064100 - 34063985
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||         ||||||||||||||  ||||||| ||||||||||||||    
T  34064100 aatgagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgttaatattacaggga 34064001  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  34064000 cgaaaagaggtattta 34063985  T

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Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 3018127 - 3018014
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||          || |||||||||||||||||||||||||||||||||||||    
T  3018127 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttaccgggactaaaaccggaattcgctaatattacagggacg 3018028  T
Q  133 aaaagaggtattta 146  Q
    ||||||||||||||    
T  3018027 aaaagaggtattta 3018014  T

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Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 9516873 - 9516985
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||         |||| ||||||||||| ||||||||||||||||||||||||    
T  9516873 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacga 9516972  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  9516973 aaagagatattta 9516985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 9619239 - 9619354
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||||||||||         ||||||||||||||| ||||||||||||||||||||||    
T  9619239 aatgaaggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttctacagggactaaaaccagaattcgctaatattacaggga 9619338  T
Q  131 cgaaaagaggtattta 146  Q
    | ||||||||||||||    
T  9619339 caaaaagaggtattta 9619354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 26252497 - 26252612
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||         ||||| |||||||| |||||||||||||||||||||||    
T  26252497 aatgggggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaactggaattcgctaatattacaggga 26252596  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||| ||||||    
T  26252597 cgaaaagagatattta 26252612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 9396959 - 9397073
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||||    
T  9396959 aatgatggtccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttt-acagggactaaaaccggaatttgctaatattacaggga 9397057  T
Q  131 cgaaaagaggtattta 146  Q
    |||||||| |||||||    
T  9397058 cgaaaagaagtattta 9397073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 38574086 - 38573967
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||         ||||||| ||||| |||||||| ||||||||||| |||    
T  38574086 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttacagggattaaaatcggaattcactaatattacatgga 38573988  T
Q  131 cgaaaagaggtatttagcctc 151  Q
    |||||||||||||||| ||||    
T  38573987 cgaaaagaggtatttaccctc 38573967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 15640830 - 15640724
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||         ||||| |||||||||||||||||||||||||||||||||||    
T  15640830 gagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaatctttttttt-acaggaactaaaaccggaattcgctaatattacagggacga 15640732  T
Q  134 aaagaggt 141  Q
    ||||||||    
T  15640731 aaagaggt 15640724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 35376388 - 35376502
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||         |||||||||||||| |||||| ||||||||||||||||    
T  35376388 aatgagggaccaaaagtggaagattctgaaattacagggacaaaatttaaatc-ttttttttacagggactaaaactggaatttgctaatattacaggga 35376486  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||| ||||||    
T  35376487 cgaaaagagatattta 35376502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 9396814 - 9396702
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||||         |||| |||||||| || ||||||||||||||||||||||||    
T  9396814 gagggaccaaaagtggaaaaatttgaaattatagggacaaaatctaaatcttttttttaacagagactaaaatcgaaattcgctaatattacagggacga 9396715  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  9396714 aaagaggtattta 9396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 31090324 - 31090436
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |          ||||||||||||| || ||||||||||||||||||||||||    
T  31090324 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaattttttttttttacagggactaaaatcgaaattcgctaatattacagggacga 31090423  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  31090424 aaagagatattta 31090436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 48259938 - 48259826
Alignment:
Q  35 agggaccaaaagt-ggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||||||         ||||||| |||||||||||||||||||||||||||||||||    
T  48259938 agggaccaaaagtaggaggaatctgaaattacatggacaaaatctaaatctttttatttacagggattaaaaccggaattcgctaatattacagggacga 48259839  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  48259838 aaagagatattta 48259826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 3273879 - 3273993
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||         | |||||||||||||| |||||||||||||||| |||    
T  3273879 aaatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatc-ttttttttatagggactaaaaccgaaattcgctaatattac-ggg 3273976  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  3273977 acgaaaagaggtattta 3273993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 35376273 - 35376166
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||         ||||||||||||||| ||||||||||||||||||||||||||||     
T  35376273 gaccaaaagtggaagaatctaaaattacagagacaaaatctaaatctttttttt-acagggactaaaaccagaattcgctaatattacagggacgaaaat 35376175  T
Q  138 aggtattta 146  Q
    |||||||||    
T  35376174 aggtattta 35376166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 31944061 - 31943959
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||||||||||| |||||||||||||||||||||||||||          ||||| ||||||||||||||||||||||||||||||||||||||    
T  31944061 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttatttacaggaactaaaaccggaattcgctaatattacagggacgaaaa 31943962  T
Q  137 gag 139  Q
    |||    
T  31943961 gag 31943959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 48580129 - 48580239
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||         |   ||| |||||||||||||||||||||||||||||||||    
T  48580129 gagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatcgttttttttatcaggattaaaaccggaattcgctaatattacagggacga 48580228  T
Q  134 aaagaggtatt 144  Q
    |||||||||||    
T  48580229 aaagaggtatt 48580239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 15640974 - 15641091
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacagg 128  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||          ||||| | |||||||||||||| ||||||||||| |    
T  15640974 aaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttttacaggaattaaaaccggaattcactaatattacaag 15641073  T
Q  129 gacgaaaagaggtattta 146  Q
    ||||||||||||||||||    
T  15641074 gacgaaaagaggtattta 15641091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 37012821 - 37012712
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||         ||| ||||| |||   |||||||||||||||||| |||||||    
T  37012821 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacaaggactgaaattagaattcgctaatattacaaggacgaa 37012722  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  37012721 aagaggtatt 37012712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 7819129 - 7819018
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||         |||  ||||||||||||||||||||||||||| | || |||    
T  7819129 gaggaaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttaca-tgactaaaaccggaattcgctaatattatatggtcga 7819031  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  7819030 aaagaggtattta 7819018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 31090179 - 31090063
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-nnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||          ||||||||||||| || ||||| ||||||||||||||    
T  31090179 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaatcgaaattcactaatattacaggg 31090080  T
Q  130 acgaaaagaggtattta 146  Q
    || |||||| |||||||    
T  31090079 acaaaaagaagtattta 31090063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 37012974 - 37013081
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    |||||||||||||||||| |||||||||||||||||||||||| |          ||||||||||||||| ||||||||||||||||||||||||||| |    
T  37012974 gaccaaaagtggaagaatatgaaattacagggacaaaatctaatt-tttttttatacagggactaaaaccagaattcgctaatattacagggacgaaatg 37013072  T
Q  138 aggtattta 146  Q
    |||||||||    
T  37013073 aggtattta 37013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 46046542 - 46046433
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||  |          ||||||||||||| ||||||||||||||||||||||||    
T  46046542 aatgagggatcaaaagtggaagaatatgaaattacagggacaaaatctattt------ttttacagggactaaaatcggaattcgctaatattacaggga 46046449  T
Q  131 cgaaaagaggtattta 146  Q
    |||||| |||||||||    
T  46046448 cgaaaaaaggtattta 46046433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 3273737 - 3273624
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatcta-aatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||           || |||||||||| ||||||||||||||||||||||||||    
T  3273737 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctataaaaaaaaaaattacggggactaaaatcggaattcgctaatattacagggacg 3273638  T
Q  133 aaaagaggtattta 146  Q
    ||||||| ||||||    
T  3273637 aaaagagatattta 3273624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 13132060 - 13131940
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagg 128  Q
    |||||||||| |||||||||||||||||||||||||| | ||| ||||||||||          |||||||||||||| | |||||| |||||||||| |    
T  13132060 aaatgagggatcaaaagtggaagaatctgaaattacatgaacataatctaaatcttttttttttacagggactaaaacagaaattcgttaatattacaag 13131961  T
Q  129 gacgaaaagaggtatttagcc 149  Q
    |||||||||||||||||||||    
T  13131960 gacgaaaagaggtatttagcc 13131940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 31218303 - 31218356
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31218303 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 31218356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 12904864 - 12904750
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||| ||||||||||||||||||||||||||| | |||||||||||||||          |||||||||||||||  ||||||||||||||| |||||    
T  12904864 aatgagagaccaaaagtggaagaatctgaaattataaggacaaaatctaaat-tttttttttacagggactaaaaccaaaattcgctaatattataggga 12904766  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||| ||||||    
T  12904765 cgaaaagagatattta 12904750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 31944210 - 31944325
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||||| |||||||||||||| |||||||||| ||||||||||||| |          |||| ||||||||||| ||||||||||||||||| |||    
T  31944210 aatgagggacaaaaagtggaagaatatgaaattacatggacaaaatctaattatttttttttacagagactaaaaccgaaattcgctaatattacaagga 31944309  T
Q  131 cgaaaagaggtattta 146  Q
    |||||||| |||||||    
T  31944310 cgaaaagaagtattta 31944325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 13132205 - 13132314
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||         ||| ||||||||| || |||||||||||||||||||||||||    
T  13132205 agggaccaaaagtggaagaatatgaaattacagggacagaatctaaatc-ttttttttaca-ggactaaaatcgaaattcgctaatattacagggacgaa 13132302  T
Q  135 aagaggtattta 146  Q
    || |||||||||    
T  13132303 aataggtattta 13132314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 4356145 - 4356261
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| ||||          |||| || |||||||| ||||||||||||||||||||| |||    
T  4356145 agggaccaaaagtggaagaatttgaaattacagagacaaaatc-aaattttttttattacagagattaaaaccgaaattcgctaatattacagggatgaa 4356243  T
Q  135 aagaggtatttagcctct 152  Q
    |||||||||| |||||||    
T  4356244 aagaggtattaagcctct 4356261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 48579980 - 48579871
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||| || |||||||||||||||||| |||||||||||||||         |||  ||||||||||| | |||| ||||||||||||||||||    
T  48579980 agggaccaaaattgaaagaatctgaaattacagagacaaaatctaaatctttttttttacatagactaaaaccgaacttcgttaatattacagggacgaa 48579881  T
Q  135 aagaggtatt 144  Q
    ||||||||||    
T  48579880 aagaggtatt 48579871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 3018276 - 3018383
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||||||         |||||||||||||||| |||||| ||||||||||||||||||    
T  3018276 agggaccaaaagtggtagaatctgaaattacacggacaaa-tctaaatctttttttt-acagggactaaaaccgaaattcgttaatattacagggacgaa 3018373  T
Q  135 aagaggtatt 144  Q
    ||||| ||||    
T  3018374 aagagatatt 3018383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 41947020 - 41946959
Alignment:
Q  94 cagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttagcctcttat 155  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  41947020 cagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttacccttttat 41946959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 48260011 - 48260125
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||| || ||||||||||||||| |||||||||||||||||||||||||||         |||| || ||||| |  |||||||||||||||||||||    
T  48260011 aatgagcgatcaaaagtggaagaatttgaaattacagggacaaaatctaaatc-ttttttttacagagattaaaatcaaaattcgctaatattacaggga 48260109  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||| ||||||    
T  48260110 cgaaaagagatattta 48260125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 26252383 - 26252337
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26252383 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26252491 - 26252418
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagt-ggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  26252491 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 26252418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9516734 - 9516806
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  9516734 acgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 9516806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9619233 - 9619161
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  |||||||||||| |||||| |||||||||| ||||||||||||||||||||    
T  9619233 acgtaagcagaatctgtatacctggcacgtaaaaagagggagcaaaagtggaggaatctgaaattacagggac 9619161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 7819274 - 7819322
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatcta 79  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7819274 aatgagggaccaaaagtggaagaatctgacattacagggacaaaatcta 7819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 34064246 - 34064294
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 83  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34064246 agggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatc 34064294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 41947120 - 41947229
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||| |          | | |||||||||||| |||||||||||||||||||||||||    
T  41947120 agggaccaaaagtggaaaaatatgaaattacaaggacaaaatctaatt--ttttttttaaaaggactaaaaccgaaattcgctaatattacagggacgaa 41947217  T
Q  135 aagaggtattta 146  Q
    ||||| ||||||    
T  41947218 aagagatattta 41947229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 46046569 - 46046620
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  46046569 atggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggac 46046620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 4356000 - 4355887
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||||||||||| |||||| ||||||||||  ||||||||||||| |         ||||| |||||||||||||||||||||||||| | |     
T  4356000 aaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaatctaaagc-ttgtttttacaggaactaaaaccggaattcgctaatattatatga 4355902  T
Q  130 acgaaaagaggtatt 144  Q
    || ||||||||||||    
T  4355901 acaaaaagaggtatt 4355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 144
Target Start/End: Original strand, 18713224 - 18713335
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagg---gactaaaaccggaattcgctaatattacagggac 131  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||         |||||   ||||||||||| || ||||||||| |||||| ||    
T  18713224 agggaccaaaactggaagaatctgaaattacagagacaaaatctaaatc-ttttttttacagggacgactaaaaccgaaactcgctaataatacaggtac 18713322  T
Q  132 gaaaagaggtatt 144  Q
    |||||||||||||    
T  18713323 gaaaagaggtatt 18713335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 31083362 - 31083463
Alignment:
Q  36 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaa 135  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||          || || || |||||||||||||||| |||||||||||||||||    
T  31083362 gggaccaaaagtggaagaatctcaaatgatagggacaaaatctaaattttattttttactggaaccaaaaccggaattcgctcatattacagggacgaaa 31083461  T
Q  136 ag 137  Q
    ||    
T  31083462 ag 31083463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 31944182 - 31944132
Alignment:
Q  21 tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  31944182 tggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacatggac 31944132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 43312324 - 43312227
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggac 131  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||| |||||          ||||||||||||| ||||||| |||||||||||||||||    
T  43312324 gagggactaaaagtggaggaatctgaaattacagggacagaatttaaatttttttttttacagggactaaaatcggaatttgctaatattacagggac 43312227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7819268 - 7819196
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  |||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  7819268 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacatggac 7819196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37012831 - 37012903
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  |||||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  37012831 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggac 37012903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9396953 - 9396882
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||| ||||||||||| |||  || ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  9396953 acgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaaattacaggga 9396882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 36887796 - 36887685
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    ||||||||||||||||||||||||| |||| | |||||   ||||||||           |||||||||||||||  ||||||||||||||||||||||     
T  36887796 tgagggaccaaaagtggaagaatctcaaatgatagggatggaatctaaacttttttttttacagggactaaaaccaaaattcgctaatattacagggacc 36887697  T
Q  133 aaaagaggtatt 144  Q
    ||||||||||||    
T  36887696 aaaagaggtatt 36887685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 18667522 - 18667471
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||||||||    
T  18667522 atggcacgtaaaatgagggaccaaaagtggaggaatttaaaattacagggac 18667471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 18667620 - 18667663
Alignment:
Q  101 taaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  18667620 taaaactggaattcgctaatattacagggacgaaaagaggtatt 18667663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 34064127 - 34064178
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  34064127 atggcatgtaaaatgagggactaaaagtggaggaatctgaaattacagggac 34064178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 48259984 - 48259933
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  48259984 atggcacgtaaaatgagggatcaaaagtggaggaatctgaaataacagggac 48259933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4356135 - 4356063
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  || ||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  4356135 acgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggac 4356063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 18713075 - 18713026
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 83  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  18713075 gagggaccaaaattggaacaatatgaaattacagggacaaaatctaaatc 18713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 20069560 - 20069673
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||| |||||||||||||||||||| |||| | ||||||| ||||||||           |||||||| ||||| |||||||||| ||||||||||||    
T  20069560 aatgagagaccaaaagtggaagaatctcaaatgatagggacataatctaaa--cttttttttacagggaccaaaactggaattcgctcatattacaggga 20069657  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||| | ||||||    
T  20069658 cgaaaagggatattta 20069673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31090185 - 31090257
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||| || |||  ||| ||||||||||| |||||||||||||| |||||||||||||| |||||    
T  31090185 acgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaaaagtggaggaatctgaaattacggggac 31090257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38574092 - 38574160
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    |||| ||||||||||| |||  ||||| |||||||||||||||||||||||| |||| |||||||||||    
T  38574092 acgtcagcagaatctgcatacatggcatgtaaaatgagggaccaaaagtggaggaatatgaaattacag 38574160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 31082302 - 31082188
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||| |||||||||||||||||| |||| | ||||||| |||||||| |         |||||||| ||| | |||||||||| |||||| |||||    
T  31082302 aatgaggggccaaaagtggaagaatctcaaatgatagggacagaatctaaa-ctttttttttacagggaccaaacctggaattcgctcatattataggga 31082204  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||| ||||||||    
T  31082203 cgaaaaggggtattta 31082188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 36888943 - 36888991
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  36888943 gagggactaaaagtggaggaatctgaaattacagggacataatctaaat 36888991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 3018241 - 3018194
Alignment:
Q  24 cacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||    
T  3018241 cacgtaaaatgagggaccaaaagtggaggaatttgaaattatagggac 3018194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 43313533 - 43313584
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||    
T  43313533 acagggactaaaaccagaattcgctaatattacagagaccaaaagtggtatt 43313584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 53896502 - 53896451
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    ||||||||||||||||||||||||| ||||||||| ||  ||||||||||||    
T  53896502 acagggactaaaaccggaattcgctcatattacagcgatcaaaagaggtatt 53896451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 15640944 - 15640902
Alignment:
Q  24 cacgtaaaatgagggaccaaaagtggaagaatctgaaattaca 66  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  15640944 cacgtaaaatgatggaccaaaagtggaggaatctgaaattaca 15640902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 51029095 - 51029141
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagag 139  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||    
T  51029095 acagggactaaaaccgaaattcgctcatattacagggaccaaaagag 51029141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 12520746 - 12520643
Alignment:
Q  42 aaaagtggaagaatctgaaattacagggacaaaatctaaa--tcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagag 139  Q
    ||||||||| ||||||||||||| ||||||||||||||||  |          | |||||||||||| ||||||||||||||||| |||||| ||||| |    
T  12520746 aaaagtggaggaatctgaaattatagggacaaaatctaaactttttttttttaatagggactaaaactggaattcgctaatattatagggactaaaagtg 12520647  T
Q  140 gtat 143  Q
    ||||    
T  12520646 gtat 12520643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 7819347 - 7819395
Alignment:
Q  98 gactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    ||||||||||| |||||||||||||||| |||||||||| || ||||||    
T  7819347 gactaaaaccgaaattcgctaatattaccgggacgaaaaaagatattta 7819395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 48580011 - 48580055
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaatta 64  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||    
T  48580011 atggcacgtaaaatgagggagcaaaagtggaggaatttgaaatta 48580055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 50462733 - 50462769
Alignment:
Q  108 ggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||||||||||||||||||||| ||||||||||||    
T  50462733 ggaattcgctaatattacagggaccaaaagaggtatt 50462769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 18667553 - 18667596
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatct 78  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||    
T  18667553 agggacaaaaactggaagaatctgaaattacagggtcaaaatct 18667596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 20068564 - 20068518
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 80  Q
    |||||||||||||||||||||||  |||| | |||||||||||||||    
T  20068564 gagggaccaaaagtggaagaatcacaaatgatagggacaaaatctaa 20068518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13132065 - 13132137
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  || ||||||||||||||| | |||||||||  |||||||||||||| ||||    
T  13132065 acgtcagcagaatctgcatacatgacacgtaaaatgaggggctaaaagtggagtaatctgaaattacatggac 13132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 3273853 - 3273806
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagg 68  Q
    |||||||||||||||||| |||||| |||||  ||||||||||||||||    
T  3273853 atggcacgtaaaatgagg-accaaacgtggagtaatctgaaattacagg 3273806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 36699483 - 36699535
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    |||||||||  | ||||| ||||||||| |||||||||||||| |||||||||    
T  36699483 aaatgagggttcgaaagtagaagaatctaaaattacagggacataatctaaat 36699535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 46934123 - 46934083
Alignment:
Q  97 ggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    ||||||||||||||||| | ||||||||||||||| |||||    
T  46934123 ggactaaaaccggaatttgttaatattacagggaccaaaag 46934083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 12248 - 12355
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||||||||||    
T  12248 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaaccggaattcgctaatattacagggacgaaaa 12347  T
Q  137 gaggtatt 144  Q
    ||||||||    
T  12348 gaggtatt 12355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 9e-36; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 23806212 - 23806327
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||| |||||||||||||||||||||    
T  23806212 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacaggga 23806311  T
Q  131 cgaaaagaggtattta 146  Q
    | ||||||||||||||    
T  23806312 caaaaagaggtattta 23806327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 17850849 - 17850961
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |         |||| ||||||||||| ||||||||||||||||||||||||    
T  17850849 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaagcattttatttacagtgactaaaaccgaaattcgctaatattacagggacga 17850948  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  17850949 aaagaggtattta 17850961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 17463351 - 17463466
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||     
T  17463351 aatgagggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggg 17463450  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  17463451 cgaaaagaggtattta 17463466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 19251585 - 19251476
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||| ||||||||||||||||||||||||    
T  19251585 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttt-acagggactaaaaccgaaattcgctaatattacagggacga 19251487  T
Q  134 aaagaggtatt 144  Q
    |||||||||||    
T  19251486 aaagaggtatt 19251476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 23854797 - 23854693
Alignment:
Q  40 ccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagag 139  Q
    |||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||| ||||||||||||||||||||||||||||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaagag 23854698  T
Q  140 gtatt 144  Q
    |||||    
T  23854697 gtatt 23854693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 26135932 - 26135828
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||| |||||||||||||||||||||||||||    
T  26135932 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaatattacagggacga 26135833  T
Q  134 aaaga 138  Q
    |||||    
T  26135832 aaaga 26135828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 26236355 - 26236474
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||          || |||||||||||| |||||||||||||||||||||    
T  26236355 aatgagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttc-caaggactaaaaccgaaattcgctaatattacaggga 26236453  T
Q  131 cgaaaagaggtatttagcctc 151  Q
    |||||||||||||||| ||||    
T  26236454 cgaaaagaggtatttaccctc 26236474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 26236242 - 26236130
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||         ||||||||||||||| |||||||||||||||||| ||||||    
T  26236242 gagggaccaaaagtgaaagaatctgaaattacagggacaaaatataaatctttttttatacagggactaaaaccagaattcgctaatattacaaggacga 26236143  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  26236142 aaagagatattta 26236130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 15106327 - 15106440
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||| || |||||||||||||||| ||||    
T  15106327 aatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat--ttttttttacagggactaaaatcgaaattcgctaatattacgggga 15106424  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  15106425 cgaaaagaggtattta 15106440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 17850704 - 17850590
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||         | ||||||||||| ||||||||||||||||||||||||    
T  17850704 aatgagggatcaaaagtggaagaatcttaaattacagagacaaaatctaaatctttttttt-atagggactaaaatcggaattcgctaatattacaggga 17850606  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  17850605 cgaaaagaggtattta 17850590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 15106182 - 15106070
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||         ||||||| |||||||| |||||||||||||||| |||||||    
T  15106182 gagggaccaaaagtggaataatctaaaattacagggacaaaatctaaatctttttatttacagggattaaaaccgaaattcgctaatattacggggacga 15106083  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  15106082 aaagagatattta 15106070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 19251729 - 19251844
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||||| ||||||||||||| |||||||||| ||||| ||||||||||         |||||||||||||||||||||| ||||||||||| ||    
T  19251729 aaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatctttttttt-acagggactaaaaccggaattcactaatattacaagg 19251827  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||||||||||    
T  19251828 acgaaaagaggtattta 19251844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 22263454 - 22263568
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn--acagggactaaaaccggaattcgctaatattacagggac 131  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||           |||| ||||||||||||||||||||||||||||||| ||    
T  22263454 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctgaatctttttttttttacagagactaaaaccggaattcgctaatattacaggaac 22263553  T
Q  132 gaaaagaggtattta 146  Q
    |||||||||||||||    
T  22263554 gaaaagaggtattta 22263568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 145
Target Start/End: Complemental strand, 30390577 - 30390463
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |          ||||||| ||||| |||||||||||||||||||| |||    
T  30390577 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaattttttttttttacagggattaaaatcggaattcgctaatattacatgga 30390478  T
Q  131 cgaaaagaggtattt 145  Q
    ||||||||| |||||    
T  30390477 cgaaaagagatattt 30390463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 26560668 - 26560561
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||         ||||||||||||| || |||||| ||||||||||||||||||    
T  26560668 agggaccaaaagtggaagaatctgaaattacagggactaaatctaaatc--tttttttacagggactaaaatcgaaattcgttaatattacagggacgaa 26560571  T
Q  135 aagaggtatt 144  Q
    ||||| ||||    
T  26560570 aagagatatt 26560561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 42670982 - 42671094
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||||||         |||||||||||||| | |||||||||||| ||||||||| |    
T  42670982 gagggaccaaaagtggaaaaatatgaaattacagggacataatctaaatccttttttttacagggactaaaactgaaattcgctaatactacagggacaa 42671081  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  42671082 aaagaggtattta 42671094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 20498866 - 20498750
Alignment:
Q  28 taaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacag 127  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||          |||||||||||||||| |||||||||||||||||     
T  20498866 taaaaggagggaccaaaagtggaagaatctgaaat-acagggacataatctaaat-attttttttacagggactaaaaccgtaattcgctaatattacat 20498769  T
Q  128 ggacgaaaagaggtattta 146  Q
     ||||||||||||||||||    
T  20498768 agacgaaaagaggtattta 20498750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 13254695 - 13254811
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagg 128  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||| ||||||          |||| |||||||||||||||||||||||||||||||    
T  13254695 aaatgagggaccaaaagtggaagaatctgaaattacagg-attaaatttaaatcttttttttttacagagactaaaaccggaattcgctaatattacagg 13254793  T
Q  129 gacgaaaagaggtattta 146  Q
    ||||||||||| ||||||    
T  13254794 gacgaaaagagatattta 13254811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 13254612 - 13254500
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||||         ||||||| |||||||  ||||||||||||||||||| |||     
T  13254612 gaggaaccaaaagtgaaagaatctgaaattacaaggacaaaatctaaatcttttattttacagggagtaaaaccaaaattcgctaatattacaggaacgg 13254513  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  13254512 aaagaggtattta 13254500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 17463210 - 17463103
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| |||          |||| ||||||||||||||||||||||||||| ||||    
T  17463210 aaatgagggaccaaaagtgggagaacctgaaattacagggacaaaatct-aatttttttttttacagcgactaaaaccggaattcgctaatattataggg 17463112  T
Q  130 acgaaaaga 138  Q
    |||||||||    
T  17463111 acgaaaaga 17463103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 20499004 - 20499120
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||         |||| |||||||||||||||| | ||||||| ||| |    
T  20499004 aaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatctttttttttacagtgactaaaaccggaatttgttaatatttcagag 20499103  T
Q  130 acgaaaagaggtattta 146  Q
    | ||||| |||||||||    
T  20499104 atgaaaataggtattta 20499120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 42670833 - 42670722
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn--acagggactaaaaccggaattcgctaatattacagggacg 132  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |            |||||||||||||||||||||||||| |||||||||||||    
T  42670833 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttttacagggactaaaaccggaattcgctactattacagggacg 42670734  T
Q  133 aaaagaggtatt 144  Q
    ||||||||||||    
T  42670733 aaaagaggtatt 42670722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 39878213 - 39878100
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||          |||||||||||||||||||||||||||||||||| |||| ||||     
T  39878213 gaccaaaagtggaagaatctgaaattacagatacataatctaaatatctttttttacagggactaaaaccggaattcgctaatattacaaggac-aaaaa 39878115  T
Q  138 aggtatttagcctct 152  Q
    ||||||||| |||||    
T  39878114 aggtatttaccctct 39878100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 22263305 - 22263197
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||         | || |||||||||| |||||| ||||||||||||||| |||    
T  22263305 agggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-tttttttcatagagactaaaaccagaattctctaatattacagggatgaa 22263207  T
Q  135 aagaggtatt 144  Q
    |||| |||||    
T  22263206 aagatgtatt 22263197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26236349 - 26236277
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  26236349 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggac 26236277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 23046813 - 23046710
Alignment:
Q  43 aaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagaggta 142  Q
    |||||||||||||||||||||||||||||| |||||||||          | || ||| |||||||||||||||| |||||||| |||||||||||||||    
T  23046813 aaagtggaagaatctgaaattacagggacagaatctaaattattttttttatagagaccaaaaccggaattcgctcatattacaaggacgaaaagaggta 23046714  T
Q  143 ttta 146  Q
    ||||    
T  23046713 ttta 23046710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 44098894 - 44098997
Alignment:
Q  43 aaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagaggta 142  Q
    |||||||||||||||||||||||||||||| |||||||||          ||||| || |||||| ||||||||| ||||||||||||||||||||| ||    
T  44098894 aaagtggaagaatctgaaattacagggacataatctaaattattttttttacaggaaccaaaaccagaattcgctcatattacagggacgaaaagagata 44098993  T
Q  143 ttta 146  Q
    ||||    
T  44098994 ttta 44098997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22263315 - 22263387
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  22263315 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggac 22263387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 23855025 - 23855069
Alignment:
Q  102 aaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23855025 aaaaccggaattcgctaatattacagggacgaaaagaggtattta 23855069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 34548684 - 34548577
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    ||||||| |||||| ||| |||||||||| ||||||||||||||||         |||||||||||||||  ||||| ||||||||||||||||||||||    
T  34548684 gaccaaaggtggaacaatatgaaattacatggacaaaatctaaatctttttttt-acagggactaaaaccaaaattcactaatattacagggacgaaaag 34548586  T
Q  138 aggtattta 146  Q
    | |||||||    
T  34548585 aagtattta 34548577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 12418982 - 12419095
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||| ||||||||| ||||| |||||| || ||||| |||||||| |         | |||||||||||||||||||||||||||||||||||    
T  12418982 aaatgagggactaaaagtggaggaatcggaaatttcatggacagaatctaaa-ctttttttttatagggactaaaaccggaattcgctaatattacaggg 12419080  T
Q  130 acgaaaagaggtatt 144  Q
    || ||||| ||||||    
T  12419081 accaaaagtggtatt 12419095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 12431042 - 12431155
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||||||| ||||||||| ||||| |||||| || ||||| |||||||| |         | |||||||||||||||||||||||||||||||||||    
T  12431042 aaatgagggactaaaagtggaggaatcggaaatttcatggacagaatctaaa-ctttttttttatagggactaaaaccggaattcgctaatattacaggg 12431140  T
Q  130 acgaaaagaggtatt 144  Q
    || ||||| ||||||    
T  12431141 accaaaagtggtatt 12431155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 15106300 - 15106249
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  15106300 atggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggac 15106249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 23806185 - 23806134
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  23806185 atggcacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggac 23806134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 30959943 - 30960044
Alignment:
Q  42 aaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagaggt 141  Q
    ||||||||| |||| |||||||||||||||| |||||||| |         ||| ||||||||||||||||||||||||||||||||||| ||||| |||    
T  30959943 aaaagtggaggaatatgaaattacagggacataatctaaa-ctttttttttacatggactaaaaccggaattcgctaatattacagggaccaaaagtggt 30960041  T
Q  142 att 144  Q
    |||    
T  30960042 att 30960044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 33290168 - 33290062
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||| |||||||||||||||| || | |||||||||| ||||| |||||||||          |||||||||||||| ||||||||||||||||||||||    
T  33290168 aaataagggaccaaaagtggaggagtatgaaattacaaggacagaatctaaattttttattttacagggactaaaactggaattcgctaatattacaggg 33290069  T
Q  130 acgaaaa 136  Q
    || ||||    
T  33290068 accaaaa 33290062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 33290308 - 33290420
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||| ||||||||||||||||||||| |||||||||| || |||||||||| |          ||||||| ||||||| |||||||||||||||||||||    
T  33290308 aaattagggaccaaaagtggaagaatatgaaattacaaggtcaaaatctaatt--ttttttttacagggattaaaaccagaattcgctaatattacaggg 33290405  T
Q  130 acgaaaagaggtatt 144  Q
    || ||||| ||||||    
T  33290406 accaaaagcggtatt 33290420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 23854811 - 23854861
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  23854811 atggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacaggga 23854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 26560880 - 26560930
Alignment:
Q  96 gggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  26560880 gggactaaaatcggaattcgctaatattacaaggacgaaaagaggtattta 26560930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 13284667 - 13284716
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatcta 79  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  13284667 aaatgagggaccaaaagtggaggaatctgaaattacaaggacaaaatcta 13284716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19251724 - 19251653
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||| ||||||||||| |||  ||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  19251724 acgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaagtggaggaatatgaaattacaggga 19251653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26560678 - 26560749
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||| ||||||||||| |||  ||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  26560678 acgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacaggga 26560749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 30958795 - 30958689
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    ||||||||||||||||||||| |||| | |||||  ||||||||| |         |||||||||||||||| |||||||||||||||||||||| ||||    
T  30958795 ggaccaaaagtggaagaatctcaaatgatagggatgaaatctaaa-ctttttttttacagggactaaaaccgaaattcgctaatattacagggaccaaaa 30958697  T
Q  137 gaggtatt 144  Q
    | ||||||    
T  30958696 gtggtatt 30958689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 21482142 - 21482235
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacag 127  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||| |         ||| |||||||||| ||||||||||||||||||||    
T  21482142 tgagggactaaaagtggaagaatctaaaatgacagggacaaaatctaaa-ctatttttttacaaggactaaaactggaattcgctaatattacag 21482235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 26136087 - 26136192
Alignment:
Q  41 caaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacgaaaagag 139  Q
    ||||||||||||||| ||||||||||  |||||||||||||||          ||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  26136087 caaaagtggaagaatatgaaattacaatgacaaaatctaaatcttttttttttacagg-actaaaaccgaaattcgttaatattacaaggacgaaaagag 26136185  T
Q  140 gtattta 146  Q
    |||||||    
T  26136186 gtattta 26136192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 42670864 - 42670915
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  42670864 atggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggac 42670915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 30390583 - 30390656
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggaca 72  Q
    ||||||||| |||||| |||  | ||||||||||||||||||||||| || | |||||||||||||||||||||    
T  30390583 acgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaaatgaaggaatctgaaattacagggaca 30390656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 23047904 - 23047957
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    |||||||  |||||||||||||||| |||||||||||||||||| |||||||||    
T  23047904 acagggagcaaaaccggaattcgctcatattacagggacgaaaataggtattta 23047957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 23806067 - 23806022
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatcta 79  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  23806067 gagggaccaaaagtggaagaatctaaaattacaggggcaaaatcta 23806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26136071 - 26135999
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||| ||||||||| |||||||||||||||| |||||| |||||||| ||||    
T  26136071 acgtaagcagaatctgcatacatggtacgtaaaataagggaccaaaagtggaggaatctaaaattacaaggac 26135999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 39878337 - 39878284
Alignment:
Q  18 atatggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||| ||||||    
T  39878337 atatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggac 39878284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 13284735 - 13284779
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    |||||||||||||||| |||||||||||||||||||||| |||||    
T  13284735 acagggactaaaaccgaaattcgctaatattacagggaccaaaag 13284779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 23854929 - 23854977
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||||    
T  23854929 gagggaccaaaagtggaagaatataaaattacagagacaaaatctaaat 23854977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 13284527 - 13284484
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaa 73  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  13284527 aaatgagggactaaaagtggaagaatatgaaattacagggacaa 13284484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 17463343 - 17463273
Alignment:
Q  3 gtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||| |||  ||||| ||||||||||||||||||| | || |||||| |||||||||||||    
T  17463343 gtaagcagaatctgcatacatggcatgtaaaatgagggaccaaaattagaggaatctaaaattacagggac 17463273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 33290272 - 33290231
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  33290272 aaatgagggaccaaaagtggaggtatctgaaattacagggac 33290231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 39878361 - 39878402
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  39878361 aaatgagggaccaaaagtgaaaaaatctgaaattacagggac 39878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 39878395 - 39878447
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    |||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||    
T  39878395 acagggacgaaaactggaattcgctaatattaca-ggacaaaaagaggtattta 39878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 13284461 - 13284417
Alignment:
Q  100 ctaaaaccggaattcgctaatattacagggacgaaaagaggtatt 144  Q
    |||||||||||||||||| ||||||||||||| ||||| ||||||    
T  13284461 ctaaaaccggaattcgctgatattacagggacaaaaagtggtatt 13284417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 20498975 - 20498927
Alignment:
Q  23 gcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||| ||||||||||   ||||||||||||||||||    
T  20498975 gcacgtaaaatgagggatcaaaagtggagtgatctgaaattacagggac 20498927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17850710 - 17850775
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaatta 64  Q
    |||| ||||||||||| |||  ||| || |||||||||||| |||||||||| |||||||||||||    
T  17850710 acgtcagcagaatctgcatacatggtacctaaaatgagggatcaaaagtggaggaatctgaaatta 17850775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 26560821 - 26560863
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaa 80  Q
    |||||||||||||||||| |||||||| | |||||||||||||    
T  26560821 gaccaaaagtggaagaatatgaaattatatggacaaaatctaa 26560863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 9481297 - 9481185
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  9481297 gagggaccaaaattggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccggaattcgctaatattacagggacga 9481198  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  9481197 aaagaggtattta 9481185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 32017767 - 32017878
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  32017767 gagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttt-acagggactaaaaccggaattcgctaatattacagggacga 32017865  T
Q  134 aaagaggtattta 146  Q
    |||||| ||||||    
T  32017866 aaagagatattta 32017878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 18500432 - 18500318
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||| ||||||||||||||| |||||    
T  18500432 aatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-tttttcttacagggactaaaaccgaaattcgctaatattataggga 18500334  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  18500333 cgaaaagaggtattta 18500318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 26385396 - 26385281
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||         ||| ||||||||||| ||||||||||||||||||| ||    
T  26385396 aatgagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatctttttttctacatggactaaaaccagaattcgctaatattacagaga 26385297  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  26385296 cgaaaagaggtattta 26385281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 19284244 - 19284132
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||         ||  |||||||||| ||||||||||||||||||| | ||||    
T  19284244 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacgtggactaaaactggaattcgctaatattacatgaacga 19284145  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  19284144 aaagaggtattta 19284132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 24732198 - 24732312
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||         ||||||||| |||  |||||||||||||||||||||||    
T  24732198 aatgagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttttacagggact-aaattggaattcgctaatattacaggga 24732296  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  24732297 cgaaaagaggtattta 24732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 24732053 - 24731938
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn---acagggactaaaaccggaattcgctaatattacaggga 130  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |             ||||||||||||||||||||||||||||||||||||||    
T  24732053 gagggaccaaaagtagaagaatctgaaattacagggacaaaatctaatttttttttttttttacagggactaaaaccggaattcgctaatattacaggga 24731954  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  24731953 cgaaaagaggtattta 24731938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 26385541 - 26385649
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    |||||||||||||||||| ||||||| |||| |||| |||||||||         ||||||||||||| |||||||||||||||||||||||||||||||    
T  26385541 gaccaaaagtggaagaatatgaaattgcaggaacaacatctaaatctttgtttttacagggactaaaatcggaattcgctaatattacagggacgaaaag 26385640  T
Q  138 aggtattta 146  Q
    |||||||||    
T  26385641 aggtattta 26385649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 9154990 - 9154884
Alignment:
Q  39 accaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgct-aatattacagggacgaaaag 137  Q
    ||||||| |||||||||||||||||||||||||||||||||||||         ||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaaatattacagggaggaaaag 9154891  T
Q  138 aggtatt 144  Q
    |||||||    
T  9154890 aggtatt 9154884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 33714605 - 33714483
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc--nnnnnnnnnacagggac--taaaaccggaattcgctaatattaca 126  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||           ||||||||  ||||||||||||||||||||||||||    
T  33714605 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttttacagggactataaaaccggaattcgctaatattaca 33714506  T
Q  127 gggacgaaaagaggtatttagcc 149  Q
    ||||||||||||  |||||||||    
T  33714505 gggacgaaaagatttatttagcc 33714483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26385402 - 26385474
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26385402 acgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 26385474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 9854146 - 9854251
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||          |||  |||||||||| |||||||||||||||||||||    
T  9854146 aaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaattattatttttaca--gactaaaaccagaattcgctaatattacaggg 9854243  T
Q  130 acgaaaag 137  Q
    || |||||    
T  9854244 acaaaaag 9854251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 30618083 - 30617970
Alignment:
Q  28 taaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacag 127  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||            | ||||||||| | |||||| ||||||||||||    
T  30618083 taaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaattttttta-----aaggactaaaatcagaattcactaatattacag 30617989  T
Q  128 ggacgaaaagaggtattta 146  Q
    |||||||||||||||||||    
T  30617988 ggacgaaaagaggtattta 30617970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 10321788 - 10321737
Alignment:
Q  94 cagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattt 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10321788 cagggactaaaaccggaattcgctaatattacagggacgaaaagaagtattt 10321737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 18500655 - 18500704
Alignment:
Q  97 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtattta 18500704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24732192 - 24732120
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||| |||||||||||||||||||||||||| ||||||||||||| ||||||    
T  24732192 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggac 24732120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33714611 - 33714679
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    |||||||||||||||| |||  ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  33714611 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacag 33714679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 9481446 - 9481494
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 83  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9481446 agggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 9481494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 30459020 - 30458903
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagg 128  Q
    ||||||| ||| |||||| ||||||||||||||||||| |||| ||||||||||          || || |||||||||| ||||| |||||||||||||    
T  30459020 aaatgagagactaaaagttgaagaatctgaaattacagtgacataatctaaatcttttttttttacgggaactaaaaccgaaattcactaatattacagg 30458921  T
Q  129 gacgaaaagaggtattta 146  Q
    |||||||||| |||||||    
T  30458920 gacgaaaagatgtattta 30458903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 2299635 - 2299688
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  2299635 acaggaactaaaaccggaattcgctaatattacaggaacgaaaagagatattta 2299688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 3230129 - 3230217
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattaca 126  Q
    ||||||||||| |||||| |||||||| | ||||||||||||||||         ||||||||||||| ||||||||||||||||||||    
T  3230129 gaccaaaagtgaaagaatatgaaattatatggacaaaatctaaatcttttattttacagggactaaaatcggaattcgctaatattaca 3230217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32017660 - 32017731
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacaggga 70  Q
    |||| ||||||||||| |||  || ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  32017660 acgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaggga 32017731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 30618194 - 30618147
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  30618194 atggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacag 30618147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18500438 - 18500511
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatct-gaaattacagggac 71  Q
    |||||||||||||||| |||  || ||||||||||||||||||||||||||| ||||||  |||||||||||||    
T  18500438 acgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctaaaaattacagggac 18500511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2299434 - 2299506
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||| || |||  |||||||||||||||||||||||||||||  |||||| |||||||| ||||    
T  2299434 acgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtggcggaatctaaaattacaaggac 2299506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 2299580 - 2299617
Alignment:
Q  42 aaaagtggaagaatctgaaattacagggacaaaatcta 79  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2299580 aaaagtggaagaatctgaaattacagggacaaaatcta 2299617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 21069627 - 21069527
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-tcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaa 135  Q
    ||||| ||| ||||||||||||| |||||||||||| |||||||| |          ||||||||||||||||||||||||| ||||||||||||| |||    
T  21069627 ggacctaaaatggaagaatctgatattacagggacagaatctaaactttttttttttacagggactaaaaccggaattcgctcatattacagggactaaa 21069528  T
Q  136 a 136  Q
    |    
T  21069527 a 21069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 33637674 - 33637625
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 83  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  33637674 gagggaccaaaagtggaagaatctaaaattacaagaacaaaatctaaatc 33637625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 14681001 - 14680949
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    |||||| ||||||||||||||||||| ||||||||||  ||||||||||||||    
T  14681001 aaatgaaggaccaaaagtggaagaatatgaaattacaaagacaaaatctaaat 14680949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 17142788 - 17142744
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  17142788 gaccaaaagtggaagaatttgaaattacagggacataatctaaat 17142744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 30618232 - 30618272
Alignment:
Q  42 aaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  30618232 aaaagtggaagaatctaaaattacagggacaaaatctaaat 30618272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 33637757 - 33637709
Alignment:
Q  24 cacgtaaaatgagggaccaaaagt-ggaagaatctgaaattacagggac 71  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  33637757 cacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 33637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 2299396 - 2299353
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  2299396 acagggactaaaaccggaattcgctaatattacatagacgaaaa 2299353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 21070802 - 21070910
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-tcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaa 135  Q
    ||||| ||||||||||||||||| |||||||||| | |||||||| |          |||| |||||| ||||||||||||| ||||||||||||| |||    
T  21070802 ggacctaaagtggaagaatctgatattacagggatagaatctaaactttttttttttacagagactaataccggaattcgctcatattacagggactaaa 21070901  T
Q  136 agaggtatt 144  Q
    || ||||||    
T  21070902 aggggtatt 21070910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 34884613 - 34884560
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    ||||||| |||||||| ||||| ||||||||||| |||||||||||| ||||||    
T  34884613 acagggattaaaaccgaaattcactaatattacaaggacgaaaagagatattta 34884560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 17142798 - 17142834
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggac 17142834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 3230016 - 3230059
Alignment:
Q  28 taaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||    
T  3230016 taaaatgagggaccaaaagtggaggaatatgaaattacaaggac 3230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 9481415 - 9481364
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||| |||||||||||| |||| |||| |||| |||||||||||||||    
T  9481415 atggcacgcaaaatgagggacaaaaaatggaggaatttgaaattacagggac 9481364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 10321997 - 10322032
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggaca 72  Q
    |||||||||||| |||||||||||||||||||||||    
T  10321997 ggaccaaaagtgaaagaatctgaaattacagggaca 10322032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 14681141 - 14681247
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    |||| |||||||||||||||| |||||| ||||| || ||||||| |||||||          |||| ||||||| ||  ||||||||||||||||||||    
T  14681141 aaataagggaccaaaagtggaggaatctaaaattgcaaggacaaagtctaaatattttattttacagagactaaagccaaaattcgctaatattacaggg 14681240  T
Q  130 acgaaaa 136  Q
    || ||||    
T  14681241 accaaaa 14681247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 33637788 - 33637831
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaa 74  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||    
T  33637788 aatgagggatcaaaagtgaaagaatatgaaattacagggacaaa 33637831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 136
Target Start/End: Original strand, 34113591 - 34113630
Alignment:
Q  97 ggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  34113591 ggactaaaaccgaaattcgctaatattacagggaccaaaa 34113630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 80
Target Start/End: Complemental strand, 10321849 - 10321799
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 80  Q
    |||||||||| |||||||| |||||| |||||||||||||| | |||||||    
T  10321849 aaatgagggagcaaaagtgtaagaatatgaaattacagggatataatctaa 10321799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 30459229 - 30459267
Alignment:
Q  101 taaaaccggaattcgctaatattacagggacgaaaagag 139  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  30459229 taaaaccgaaattcgctaatattacaggaacgaaaagag 30459267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 32017648 - 32017605
Alignment:
Q  37 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 82  Q
    ||||||||||||||||||||||||||||||   |||||||||||||    
T  32017648 ggaccaaaagtggaagaatctgaaattaca--aacaaaatctaaat 32017605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30459025 - 30459097
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  || ||||||||||||| || |||||||| || |||||||||||||| ||||    
T  30459025 acgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaagtgaaataatctgaaattacaaggac 30459097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 2299428 - 2299389
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  2299428 aatgagggactaaaagtggaagaat-tgaaattacagggac 2299389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 33637844 - 33637892
Alignment:
Q  98 gactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    ||||||||||| |||||| ||||||||||  || |||||||||||||||    
T  33637844 gactaaaaccgaaattcggtaatattacaaagatgaaaagaggtattta 33637892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 3988 - 3872
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggg 129  Q
    ||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||         |||||||||||||||||||||||||||||||||||||    
T  3988 aaatgagcgaccaacagtggaagaatttgaaattacagggacataatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggg 3889  T
Q  130 acgaaaagaggtattta 146  Q
    |||||||||| ||||||    
T  3888 acgaaaagagatattta 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 4014 - 4061
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacag 67  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||    
T  4014 atggcaagtaaaatgagggaccaaaagtggaggaatatgaaattacag 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 4823 - 4937
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||         ||||||| ||||||||||||| ||||||||||||||||    
T  4823 aatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttattttt-acagggattaaaaccggaatttgctaatattacaggga 4921  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  4922 cgaaaagaggtattta 4937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 4684 - 4565
Alignment:
Q  28 taaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattaca 126  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||| ||||||          ||||||||||||| ||||||||||||||||||||    
T  4684 taaaaggagggaccaaaagtagaagaatctcaaattacagggacaaaatttaaatcttttttttttacagggactaaaatcggaattcgctaatattaca 4585  T
Q  127 gggacgaaaagaggtattta 146  Q
     |||||||||||||||||||    
T  4584 aggacgaaaagaggtattta 4565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4817 - 4745
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||||||||||||||| |||  ||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  4817 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 4745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 67; Significance: 8e-30; HSPs: 3)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 7466 - 7575
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnn-acagggactaaaaccggaattcgctaatattacagggacgaaaa 136  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  7466 gaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaa 7565  T
Q  137 gaggtattta 146  Q
     |||||||||    
T  7566 taggtattta 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 7344 - 7229
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||||||         ||||| ||||| ||| |||||||||||||||||| |||    
T  7344 aatgagggaccgaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaacaccagaattcgctaatattacaagga 7245  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||||||||||||    
T  7244 cgaaaagaggtattta 7229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 7375 - 7422
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtgg-aagaatctgaaattaca 66  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||    
T  7375 atggtacgtaaaatgagggaccaaaagtggtaggaatctgaaattaca 7422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 8582 - 8697
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||         | ||||||||||||||||||||||||||||| |||| |    
T  8582 aatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttaaagggactaaaaccggaattcgctaatattgcaggaa 8681  T
Q  131 cgaaaagaggtattta 146  Q
    | |||||  |||||||    
T  8682 caaaaagcagtattta 8697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 8434 - 8328
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaag 137  Q
    ||||||||||| ||||||||||  |||| |||||||||||||||||         || ||||||||||||| ||||||||||||||||||||||||||||    
T  8434 gaccaaaagtgaaagaatctga--ttactgggacaaaatctaaatctttttatttacggggactaaaaccgaaattcgctaatattacagggacgaaaag 8337  T
Q  138 aggtattta 146  Q
    |||||||||    
T  8336 aggtattta 8328  T

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Target: scaffold0141; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8576 - 8505
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||| |||  || |||||||||||||| ||||||| |||| ||||||||||||||| ||||    
T  8576 acgtcagcagaatctgcatacatgacacgtaaaatgagg-accaaaaatggaggaatctgaaattacaaggac 8505  T

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Target: scaffold0809 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 1525 - 1414
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacga 133  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||         ||||||||||||| || ||||||| |||||||| ||| |||    
T  1525 gagggaccaaaagtggaagaatctgaaattacagggacataatctaaatc-ttttttttacagggactaaaatcgaaattcgcaaatattaccgggtcga 1427  T
Q  134 aaagaggtattta 146  Q
    |||||||||||||    
T  1426 aaagaggtattta 1414  T

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Target: scaffold0809; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 151
Target Start/End: Original strand, 1672 - 1786
Alignment:
Q  33 tgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||| |          | ||||||||||||||||||||| ||||||||||||||||    
T  1672 tgagggaccaaaagtggaagaatctgaaattacaaggacataatctaatt----ttttttatagggactaaaaccggaattcgttaatattacagggacg 1767  T
Q  133 aaaagaggtatttagcctc 151  Q
    |||||||| ||||| ||||    
T  1768 aaaagagggatttaccctc 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 1659 - 1592
Alignment:
Q  6 agcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||||  |||||||||||||| ||||    
T  1659 agcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatctgaaattacaaggac 1592  T

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Target: scaffold0352 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 4781 - 4670
Alignment:
Q  35 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaa 134  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||           | |||||||||||| |||||||||||||||| ||||||| ||    
T  4781 agggaccaaaagtggaggaatctgaaattacagggacagaatctaaacttttttttttatagggactaaaactggaattcgctaatattgcagggactaa 4682  T
Q  135 aagaggtattta 146  Q
    ||||||||||||    
T  4681 aagaggtattta 4670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 5941 - 6054
Alignment:
Q  34 gagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa-tcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacg 132  Q
    |||||| |||||||||| ||||||||||||||||||||| |||||||| |          ||||||||||||| ||||||||||||||||| |||||||     
T  5941 gagggatcaaaagtggaggaatctgaaattacagggacagaatctaaactttttttttttacagggactaaaatcggaattcgctaatattgcagggacc 6040  T
Q  133 aaaagaggtattta 146  Q
    ||||||||||||||    
T  6041 aaaagaggtattta 6054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 5008 - 5121
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacaggga 130  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||          ||  |||| ||||||||||||||||||||||||| |||    
T  5008 aatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaat-attttttttactaggacaaaaaccggaattcgctaatattacatgga 5106  T
Q  131 cgaaaagaggtattta 146  Q
    ||||||| ||||||||    
T  5107 cgaaaag-ggtattta 5121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 4932 - 4883
Alignment:
Q  97 ggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  4932 ggactaaaaccgaaattcgctaatattacaggaacaaaaagaggtattta 4883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5002 - 4929
Alignment:
Q  1 acgtaagcagaatctgaata--tggcacgtaaaatgagggaccaaaagtggaag-aatctgaaattacagggac 71  Q
    |||||||||||||||  |||  ||||||||||||||||||||||||||||| || ||| |||||||||| ||||    
T  5002 acgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtgggagaaatatgaaattacatggac 4929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 15950 - 16003
Alignment:
Q  93 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtattta 146  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  15950 acagagactaaaaccggaattcgctaatattacatggacgaaaagagatattta 16003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 15899 - 15939
Alignment:
Q  38 gaccaaaagtggaagaatctgaaattacagggacaaaatct 78  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  15899 gaccaaaagtgaaagaatatgaaattacagggacaaaatct 15939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 338 - 286
Alignment:
Q  31 aatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 83  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  338 aatgagggaccaaaagtggaagaatctgaaattatggggagaaaatctaaatc 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 365 - 416
Alignment:
Q  20 atggcacgtaaaatgagggaccaaaagtggaagaatctgaaattacagggac 71  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||    
T  365 atggtacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggac 416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 487 - 605
Alignment:
Q  39 accaaaagtggaagaatctgaaattacagggacaaaatctaaatcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaaga 138  Q
    ||||||||||||| |||||||||||||  | ||||||||||||||         ||||||| ||||||||||||||| ||||||| ||| ||  ||||||    
T  487 accaaaagtggaataatctgaaattac--gaacaaaatctaaatcttttattttacagggagtaaaaccggaattcgttaatattccagagataaaaaga 584  T
Q  139 ggtatttagcctcttataaat 159  Q
    |||||||| ||| ||| ||||    
T  585 ggtatttacccttttacaaat 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 269 - 229
Alignment:
Q  99 actaaaaccggaattcgctaatattacagggacgaaaagag 139  Q
    ||||||||| |||||||||||| |||||||||| |||||||    
T  269 actaaaaccagaattcgctaattttacagggacaaaaagag 229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 171 - 274
Alignment:
Q  42 aaaagtggaagaatctgaaattacagggacaaaatctaaa--tcnnnnnnnnnacagggactaaaaccggaattcgctaatattacagggacgaaaagag 139  Q
    ||||||||| ||||||||||||| ||||||||||||||||  |          | |||||||||||| ||||||||||||||||| |||||| ||||| |    
T  171 aaaagtggaggaatctgaaattatagggacaaaatctaaactttttttttttaatagggactaaaactggaattcgctaatattatagggactaaaagtg 270  T
Q  140 gtat 143  Q
    ||||    
T  271 gtat 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 27648 - 27699
Alignment:
Q  30 aaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 81  Q
    ||||||| |||| ||| ||||||||||||| |||||||||||| ||||||||    
T  27648 aaatgagagaccgaaattggaagaatctgatattacagggacataatctaaa 27699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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