View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5588_low_4 (Length: 413)
Name: NF5588_low_4
Description: NF5588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5588_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 108 - 396
Target Start/End: Original strand, 25016118 - 25016406
Alignment:
| Q |
108 |
ttaagatggactcactcttcctaagccaaggtagtgagcaacaatggcagcaggaatggcagggaagagaatggacagcttggtaccaagaataacctct |
207 |
Q |
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| T |
25016118 |
ttaagatggactcactcttcctaagccaaggtagtgagcaacaatggcagcaggaatggcagggaagagaatggacagcttggtaccaagaataacctct |
25016217 |
T |
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| Q |
208 |
tggatgttaaccaacacgttccggagcgaagcacatcgaatcctcgacacaagagcgtgatcagatttcttgcgcaaggaagaagaagacatgccatgcg |
307 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25016218 |
tggatgttaaccaaaacgttccggagcgaagcacatcgaatccttgacacaagagcgtgatcagatttcttgcgcaaggaagaagaagacatgccatgcg |
25016317 |
T |
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| Q |
308 |
cggtccggctccggccatgtccatgtctagcttccttggtcaagacctttggattaccattctccaacagccatggttgttcttgttga |
396 |
Q |
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| T |
25016318 |
cggtccggctccggccatgtccatgtctagcttccttggtcaagacctttggattaccattctccaacagccatggttgttcttgttga |
25016406 |
T |
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