View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5589_high_31 (Length: 250)
Name: NF5589_high_31
Description: NF5589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5589_high_31 |
 |  |
|
| [»] chr7 (1 HSPs) |
 |  |
|
| [»] chr2 (3 HSPs) |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 9 - 250
Target Start/End: Complemental strand, 29623347 - 29623106
Alignment:
| Q |
9 |
agcagagagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggt |
108 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29623347 |
agcaaagagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggt |
29623248 |
T |
 |
| Q |
109 |
gaagatttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctca |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29623247 |
gaagatttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctca |
29623148 |
T |
 |
| Q |
209 |
cacaaaggatagacattgctcttgatgtagctcatgcattgg |
250 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29623147 |
cacaaaggatagacattgctcttgatgtagctcatgcattgg |
29623106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 35385983 - 35386220
Alignment:
| Q |
9 |
agcagagagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggt |
108 |
Q |
| |
|
|||| |||||||||| |||||||| || |||| ||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
35385983 |
agcaaagagtttcatggcagaatgcaatgctctgggaaagatgaagcaccagaatcttgtcaaggtcctaacctgttgttcaagtgttgattataagggt |
35386082 |
T |
 |
| Q |
109 |
gaagatttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctca |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||| |||||| |||||| | |||||| |||||||||| |||| || |||||||||||||||| |
|
|
| T |
35386083 |
gaagatttcaaggctattgtttttgagttcatgtcaaatgagagtcttgaaaagtttttgcacaataatgaagggtctgaaaatcataatctcaacctca |
35386182 |
T |
 |
| Q |
209 |
cacaaaggatagacattgctcttgatgtagctcatgca |
246 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
35386183 |
cataaaggttagacattgctcttgatgtagctcatgca |
35386220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 43 - 250
Target Start/End: Original strand, 35754819 - 35755026
Alignment:
| Q |
43 |
ggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaagatttcaaggctattgtttttgagttcatgc |
142 |
Q |
| |
|
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35754819 |
ggaaagatgaagcaccggaatcttgtcaagattttaacttgttgttcaagtgttgattataatggtgaagatttcaaagctattgtttttgagttcatgt |
35754918 |
T |
 |
| Q |
143 |
ctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctcacacaaaggatagacattgctcttgatgtagctca |
242 |
Q |
| |
|
| ||| |||||| |||||| ||||||||||||||||||| || |||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
35754919 |
caaatgggagtcttgaaaagttgttgcacgataatgaagggtcaggaaattttaatctcaacctcacacaaaggttagacattgctcttgatgtagctca |
35755018 |
T |
 |
| Q |
243 |
tgcattgg |
250 |
Q |
| |
|
|||||||| |
|
|
| T |
35755019 |
tgcattgg |
35755026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 35410649 - 35410881
Alignment:
| Q |
14 |
agagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaaga |
113 |
Q |
| |
|
|||||||||| || ||||| || || || ||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
35410649 |
agagtttcatggcggaatgcaatgctttaagaaagatgaggcaccgtaatcttgtcaaaatcctaacgtgttgttcaagtgttgattataatggtgaaga |
35410748 |
T |
 |
| Q |
114 |
tttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctcacacaa |
213 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || |||||||||| | ||||| ||||| ||||| |||| || ||||||||||||||||||||| |
|
|
| T |
35410749 |
gttcaaggctattgtttttgagttaatgcctaatgggaatctagaaaagtttttgcatgataacgaagggtctgaaaatcataatctcaacctcacacaa |
35410848 |
T |
 |
| Q |
214 |
aggatagacattgctcttgatgtagctcatgca |
246 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |
|
|
| T |
35410849 |
aggttagacattgctcttgatgtagctcatgca |
35410881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 246
Target Start/End: Original strand, 35366831 - 35367068
Alignment:
| Q |
9 |
agcagagagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggt |
108 |
Q |
| |
|
|||| ||||||||| ||||||||| || |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
35366831 |
agcaaagagtttcaaagcagaatgtgaagctctaggaaagatgaagcaccgaaatcttgtcaagatcctaacttgttgttcaagcattgattataagggt |
35366930 |
T |
 |
| Q |
109 |
gaagatttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctca |
208 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |||||||||||| | |||| ||||| ||||| ||||||| |||||||||| ||||| |
|
|
| T |
35366931 |
gaagagttcaaggctattgtttttgagttcatgcctaagggaagtctagaaaagcttctgcatgataacgaagggtctggaaatcataatctcagcctca |
35367030 |
T |
 |
| Q |
209 |
cacaaaggatagacattgctcttgatgtagctcatgca |
246 |
Q |
| |
|
||| || | ||||||||||||||||||||||||||| |
|
|
| T |
35367031 |
gacacagagttgacattgctcttgatgtagctcatgca |
35367068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 250
Target Start/End: Original strand, 35376377 - 35376624
Alignment:
| Q |
9 |
agcagagagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggt |
108 |
Q |
| |
|
|||| ||||||||||||| ||||| || || ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
35376377 |
agcaaagagtttcattgcggaatgcaatgctttaggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggt |
35376476 |
T |
 |
| Q |
109 |
gaagatttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaag-----ga-tctggaagccataatctca |
202 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||| | || ||| ||||| ||||||| | ||| |||| || ||| ||| | ||||||| |
|
|
| T |
35376477 |
gaagattttaaggccattgtttttgagttcatgcctagtgggaatctggaaaacctgttgcatggtaacgaagatcatgagtctagaaatctgaatctca |
35376576 |
T |
 |
| Q |
203 |
acctcacacaaaggatagacattgctcttgatgtagctcatgcattgg |
250 |
Q |
| |
|
| ||||||||||| ||||||||||||| || |||||||||||||||| |
|
|
| T |
35376577 |
atttcacacaaaggttagacattgctctcgacgtagctcatgcattgg |
35376624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 41 - 250
Target Start/End: Original strand, 35423668 - 35423883
Alignment:
| Q |
41 |
taggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaagatttcaaggctattgtttttgagttcat |
140 |
Q |
| |
|
||||||||||||| ||||| |||||||| || ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
35423668 |
taggaaagatgaagcaccgtaatcttgtgaaaatcctaacttgctgttcaagtgttgattataatggtgaagattttaaggccattgtttttgagttcat |
35423767 |
T |
 |
| Q |
141 |
gcctaatatgagtctagaaaagatgttgcacgataatgaag-----ga-tctggaagccataatctcaacctcacacaaaggatagacattgctcttgat |
234 |
Q |
| |
|
||||| | || ||||||||| ||||||| | ||| |||| || ||| ||| | |||||||| ||||||||||| ||||||||||||| || |
|
|
| T |
35423768 |
gcctagtgggaatctagaaaacctgttgcatggtaacgaagatcatgagtctagaaatctgaatctcaatttcacacaaaggttagacattgctctcgac |
35423867 |
T |
 |
| Q |
235 |
gtagctcatgcattgg |
250 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
35423868 |
gtagctcatgcattgg |
35423883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 41 - 170
Target Start/End: Original strand, 35370249 - 35370379
Alignment:
| Q |
41 |
taggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaaga-tttcaaggctattgtttttgagttca |
139 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||| |
|
|
| T |
35370249 |
taggaaagatgaggcaccgtaatcttgtcaaaatcctaacgtgttgctcaagtgttgattataatggtgaagagttccaaggctattgtttttgagttca |
35370348 |
T |
 |
| Q |
140 |
tgcctaatatgagtctagaaaagatgttgca |
170 |
Q |
| |
|
|||| ||| |||| ||||||| |||||||| |
|
|
| T |
35370349 |
tgcccaatgggagtttagaaaacatgttgca |
35370379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 35437020 - 35437120
Alignment:
| Q |
45 |
aaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaagatttcaaggctattgtttttgagttcatgcct |
144 |
Q |
| |
|
||||||||||||| || ||| | ||| ||||||||| ||||||||| |||||||||| ||||||| |||||||||||| |||||||| ||||||||| |
|
|
| T |
35437020 |
aaagatgaaacacaaaaaccttctgaagctcctaactttctgttcaagtattgattataatggtgaagttttcaaggctatagtttttgaattcatgcct |
35437119 |
T |
 |
| Q |
145 |
a |
145 |
Q |
| |
|
| |
|
|
| T |
35437120 |
a |
35437120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 10420796 - 10420556
Alignment:
| Q |
6 |
aggagcagagagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaa |
105 |
Q |
| |
|
||||||| ||||||||| |||||| | || |||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10420796 |
aggagcaaagagtttcaaagcagaacgcgaagctctaggaaagatgaaacaccgaaaccttgtcaagatcctaacttgttgttcaagcgttgattataag |
10420697 |
T |
 |
| Q |
106 |
ggtgaagatttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacc |
205 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| ||||| ||||||| |||||||||| || |
|
|
| T |
10420696 |
ggtgaagagttcaaggctattgtttttgagttcatgcctaaggggagtctagaaaagcttctgcacgataaagaagggtctggaattcataatctcagcc |
10420597 |
T |
 |
| Q |
206 |
tcacacaaaggatagacattgctcttgatgtagctcatgca |
246 |
Q |
| |
|
||| ||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
10420596 |
tcagacaaagggttgacattgctcttgatgtagctcatgca |
10420556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 41 - 246
Target Start/End: Complemental strand, 10415874 - 10415669
Alignment:
| Q |
41 |
taggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaagatttcaaggctattgtttttgagttcat |
140 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10415874 |
taggaaagatgaagcaccgtaatcttgtcaaaatcctaacttgttgttcaagtgttgattataatggtgaagatttcaaggctattgtttttgagttcat |
10415775 |
T |
 |
| Q |
141 |
gcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctcacacaaaggatagacattgctcttgatgtagct |
240 |
Q |
| |
|
|||||| |||||| |||||||| |||||||||| ||||| ||||||| |||||||||| ||| |||||||| ||||||| ||||||||| ||||| |
|
|
| T |
10415774 |
gcctaaggggagtctggaaaagattctgcacgataacgaagggtctggaattcataatctcagcctggcacaaaggttagacatcgctcttgatctagct |
10415675 |
T |
 |
| Q |
241 |
catgca |
246 |
Q |
| |
|
|||||| |
|
|
| T |
10415674 |
catgca |
10415669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 10410196 - 10410077
Alignment:
| Q |
28 |
gaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaagatttcaaggctattg |
127 |
Q |
| |
|
||||| ||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10410196 |
gaatgcaaagctctgggaaacatgaagcaccggaatcttgttaagatcctaacttgttgttcaagtgttgattataaaggtgaagatttcaaggctattg |
10410097 |
T |
 |
| Q |
128 |
tttttgagttcatgcctaat |
147 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10410096 |
tttttgagttcatgcctaat |
10410077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 30662998 - 30663234
Alignment:
| Q |
14 |
agagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaaga |
113 |
Q |
| |
|
||||||||| || ||||| ||| || | ||||||||||| ||||| |||||||||||||| || || ||||||||||| || |||||||| ||||| || |
|
|
| T |
30662998 |
agagtttcacagctgaatgcaaagctttgggaaagatgaagcaccgaaatcttgtcaagattcttacatgttgttcaagcgtagattataagggtgacga |
30663097 |
T |
 |
| Q |
114 |
tttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctcacacaa |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||| ||||||| |||||||||| |||||||||| |
|
|
| T |
30663098 |
gttcaaggctattgtttttgagttcatgcctaaggggagtctagaaaagcttctgcacgataacgaagagtctggaattcataatctcagcctcacacaa |
30663197 |
T |
 |
| Q |
214 |
aggatagacattgctcttgatgtagctcatgcattgg |
250 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
30663198 |
agggttgacattgctcttgatgtagctcatgcattgg |
30663234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 30671678 - 30671914
Alignment:
| Q |
14 |
agagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaaga |
113 |
Q |
| |
|
||||||||| || ||||| ||| || | ||||||||||| ||||| |||||||||||||| || || ||||||||||| || |||||||| ||||| || |
|
|
| T |
30671678 |
agagtttcacagctgaatgcaaagctttgggaaagatgaagcaccgaaatcttgtcaagattcttacatgttgttcaagcgtagattataagggtgacga |
30671777 |
T |
 |
| Q |
114 |
tttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctcacacaa |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||| ||||||| |||||||||| |||||||||| |
|
|
| T |
30671778 |
gttcaaggctattgtttttgagttcatgcctaaggggagtctagaaaagcttctgcacgataacgaagagtctggaattcataatctcagcctcacacaa |
30671877 |
T |
 |
| Q |
214 |
aggatagacattgctcttgatgtagctcatgcattgg |
250 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
30671878 |
agggttgacattgctcttgatgtagctcatgcattgg |
30671914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 30626047 - 30626283
Alignment:
| Q |
14 |
agagtttcattgcagaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaaga |
113 |
Q |
| |
|
||||||||| || ||||| ||| || | ||||||||||| ||||| |||||||||||||| || || ||||||||||| | |||||||| ||||| || |
|
|
| T |
30626047 |
agagtttcacagctgaatgcaaagctttgggaaagatgaagcaccgaaatcttgtcaagattcttacatgttgttcaagaatagattataagggtgacga |
30626146 |
T |
 |
| Q |
114 |
tttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaaggatctggaagccataatctcaacctcacacaa |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||| ||||||| |||||||||| |||||||||| |
|
|
| T |
30626147 |
gttcaaggctattgtttttgagttcatgcctaaggggagtctagaaaagcttctgcacgataacgaagagtctggaattcataatctcagcctcacacaa |
30626246 |
T |
 |
| Q |
214 |
aggatagacattgctcttgatgtagctcatgcattgg |
250 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
30626247 |
agggttgacattgctcttgatgtagctcatgcattgg |
30626283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 246
Target Start/End: Original strand, 1153787 - 1153954
Alignment:
| Q |
79 |
acttgttgttcaagtgttgattataaaggtgaagatttcaaggctattgtttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatg |
178 |
Q |
| |
|
|||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| || |
|
|
| T |
1153787 |
acttgttgctcaagtattgattgcaaaggtgaagatttcaaggctattgtttttgagttcatgcctaacgggagtctagaaaagatgttgcatgatattg |
1153886 |
T |
 |
| Q |
179 |
aaggatctggaagccataatctcaacctcacacaaaggatagacattgctcttgatgtagctcatgca |
246 |
Q |
| |
|
|||| |||| || || |||||||| |||||| ||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
1153887 |
aagggtctgaaaatcacaatctcaagctcacaaaaagggtagattttgctcttgatatagctcatgca |
1153954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 13564620 - 13564775
Alignment:
| Q |
28 |
gaatgtaaatctctaggaaagatgaaacaccggaatcttgtcaagatcctaacttgttgttcaagtgttgattataaaggtgaagatttcaaggctattg |
127 |
Q |
| |
|
||||| ||| || ||||||||||||| ||||| |||| ||| ||||| || ||| ||||||||| ||||| |||| ||||| |||||||||||||||| |
|
|
| T |
13564620 |
gaatgcaaagctttaggaaagatgaagcaccgaaatcgtgttaagattcttccttaatgttcaagtattgataataagggtgacgatttcaaggctattg |
13564719 |
T |
 |
| Q |
128 |
tttttgagttcatgcctaatatgagtctagaaaagatgttgcacgataatgaagga |
183 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||| |||| |||||| |
|
|
| T |
13564720 |
tttttgagttcatgtctaatggtagtctagaaaagatgttgcacaataacgaagga |
13564775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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