View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5589_low_7 (Length: 558)

Name: NF5589_low_7
Description: NF5589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5589_low_7
NF5589_low_7
[»] chr1 (45 HSPs)
chr1 (12-530)||(43188656-43189174)
chr1 (17-197)||(43209020-43209199)
chr1 (418-529)||(32152117-32152226)
chr1 (418-527)||(31808009-31808115)
chr1 (419-527)||(13723515-13723621)
chr1 (303-376)||(43209219-43209292)
chr1 (418-527)||(4813499-4813606)
chr1 (447-530)||(41737113-41737194)
chr1 (449-530)||(38680465-38680544)
chr1 (416-527)||(10842286-10842393)
chr1 (418-530)||(25258289-25258399)
chr1 (418-530)||(31305277-31305387)
chr1 (433-530)||(32144285-32144380)
chr1 (467-527)||(28723690-28723748)
chr1 (458-530)||(30336058-30336128)
chr1 (458-530)||(50692408-50692478)
chr1 (459-526)||(15911590-15911655)
chr1 (417-528)||(40261554-40261662)
chr1 (416-530)||(15512815-15512927)
chr1 (416-530)||(28948998-28949110)
chr1 (464-530)||(47754676-47754740)
chr1 (417-513)||(4081838-4081932)
chr1 (458-530)||(16582532-16582602)
chr1 (458-530)||(44335288-44335358)
chr1 (417-528)||(23982628-23982737)
chr1 (492-527)||(16395585-16395620)
chr1 (492-530)||(2342935-2342973)
chr1 (417-530)||(8984695-8984806)
chr1 (416-530)||(51390571-51390681)
chr1 (458-530)||(5085123-5085193)
chr1 (458-530)||(32047441-32047511)
chr1 (458-530)||(33231839-33231909)
chr1 (458-530)||(48721902-48721972)
chr1 (464-527)||(4081931-4081992)
chr1 (467-530)||(25063218-25063279)
chr1 (495-530)||(291669-291704)
chr1 (467-529)||(3072147-3072207)
chr1 (467-529)||(28679856-28679916)
chr1 (492-530)||(13145449-13145487)
chr1 (458-527)||(30898600-30898667)
chr1 (492-530)||(47070995-47071033)
chr1 (458-530)||(3143402-3143472)
chr1 (458-530)||(13352833-13352903)
chr1 (458-530)||(34696917-34696987)
chr1 (447-530)||(20564763-20564844)
[»] chr7 (31 HSPs)
chr7 (417-530)||(31373733-31373844)
chr7 (448-527)||(37491657-37491734)
chr7 (464-527)||(29992981-29993042)
chr7 (416-529)||(19236103-19236213)
chr7 (429-530)||(46783876-46783975)
chr7 (453-530)||(27213482-27213557)
chr7 (418-527)||(40740911-40741017)
chr7 (452-527)||(48193609-48193682)
chr7 (458-530)||(20123450-20123520)
chr7 (447-530)||(2276612-2276693)
chr7 (464-527)||(26201006-26201067)
chr7 (416-527)||(28663714-28663822)
chr7 (458-527)||(4089538-4089605)
chr7 (453-530)||(25750363-25750438)
chr7 (458-530)||(6376168-6376238)
chr7 (459-527)||(21752529-21752595)
chr7 (472-527)||(21392931-21392984)
chr7 (417-528)||(29636077-29636186)
chr7 (467-525)||(5334435-5334491)
chr7 (467-529)||(19477452-19477512)
chr7 (458-530)||(27162939-27163007)
chr7 (465-530)||(36726208-36726271)
chr7 (458-530)||(21388242-21388312)
chr7 (458-530)||(21801091-21801161)
chr7 (453-529)||(27170007-27170080)
chr7 (458-530)||(37048035-37048105)
chr7 (458-530)||(37673737-37673807)
chr7 (458-530)||(48767564-48767634)
chr7 (472-527)||(4068413-4068466)
chr7 (467-530)||(40211312-40211373)
chr7 (464-527)||(42993226-42993287)
[»] chr4 (39 HSPs)
chr4 (429-530)||(41920073-41920172)
chr4 (417-527)||(31486446-31486555)
chr4 (448-530)||(56373379-56373459)
chr4 (447-530)||(14602690-14602771)
chr4 (452-530)||(29584888-29584964)
chr4 (458-529)||(5416905-5416972)
chr4 (458-530)||(37175057-37175126)
chr4 (458-530)||(38136355-38136425)
chr4 (419-527)||(45079849-45079955)
chr4 (416-527)||(19654386-19654495)
chr4 (464-530)||(3094188-3094252)
chr4 (418-527)||(39414196-39414303)
chr4 (458-530)||(12624696-12624766)
chr4 (458-530)||(22651464-22651534)
chr4 (467-527)||(33246535-33246593)
chr4 (458-526)||(34543702-34543768)
chr4 (467-530)||(13096577-13096638)
chr4 (458-529)||(20262430-20262499)
chr4 (464-521)||(20791933-20791988)
chr4 (458-527)||(28116543-28116610)
chr4 (458-527)||(30153260-30153327)
chr4 (458-530)||(25477225-25477295)
chr4 (467-527)||(48472533-48472591)
chr4 (458-530)||(50782778-50782848)
chr4 (467-530)||(10602241-10602302)
chr4 (458-527)||(20016525-20016590)
chr4 (467-530)||(46729314-46729375)
chr4 (418-527)||(7002142-7002250)
chr4 (458-530)||(20293743-20293817)
chr4 (452-530)||(22750877-22750953)
chr4 (416-530)||(26203088-26203200)
chr4 (452-526)||(51787765-51787837)
chr4 (458-527)||(16070431-16070498)
chr4 (458-527)||(20291340-20291407)
chr4 (458-527)||(37625163-37625230)
chr4 (467-528)||(45628111-45628170)
chr4 (447-527)||(10541295-10541372)
chr4 (458-530)||(39237624-39237694)
chr4 (467-530)||(5932895-5932956)
[»] chr5 (31 HSPs)
chr5 (415-530)||(38972161-38972273)
chr5 (417-530)||(32067787-32067898)
chr5 (458-530)||(21574914-21574984)
chr5 (458-530)||(29866189-29866259)
chr5 (464-530)||(600771-600835)
chr5 (458-530)||(4857528-4857602)
chr5 (464-530)||(20946093-20946157)
chr5 (416-530)||(39690520-39690632)
chr5 (458-530)||(3559061-3559131)
chr5 (467-530)||(4745136-4745197)
chr5 (464-530)||(15898497-15898561)
chr5 (448-530)||(27587828-27587908)
chr5 (464-530)||(36177298-36177362)
chr5 (458-527)||(27642502-27642569)
chr5 (458-523)||(43060551-43060614)
chr5 (458-530)||(3247308-3247378)
chr5 (418-530)||(21912081-21912190)
chr5 (467-529)||(10523309-10523369)
chr5 (492-527)||(10934038-10934073)
chr5 (467-521)||(11980725-11980777)
chr5 (464-530)||(25017708-25017772)
chr5 (492-527)||(30348114-30348149)
chr5 (415-524)||(7510563-7510670)
chr5 (492-530)||(29874210-29874248)
chr5 (458-527)||(34877666-34877733)
chr5 (492-529)||(129642-129679)
chr5 (447-527)||(14044535-14044613)
chr5 (492-529)||(24781303-24781340)
chr5 (448-527)||(35569042-35569119)
chr5 (447-483)||(36750853-36750889)
chr5 (467-530)||(41521197-41521258)
[»] chr3 (41 HSPs)
chr3 (413-527)||(20945340-20945452)
chr3 (418-527)||(41825177-41825283)
chr3 (415-529)||(11388077-11388189)
chr3 (429-529)||(14645927-14646025)
chr3 (466-530)||(27047215-27047277)
chr3 (464-527)||(48309450-48309510)
chr3 (467-529)||(33412011-33412071)
chr3 (458-530)||(46435767-46435837)
chr3 (452-530)||(26517252-26517328)
chr3 (418-527)||(29611794-29611900)
chr3 (416-527)||(42010825-42010934)
chr3 (439-530)||(52325540-52325629)
chr3 (464-530)||(12077780-12077844)
chr3 (418-527)||(41740013-41740121)
chr3 (458-527)||(11344557-11344624)
chr3 (449-530)||(27638114-27638193)
chr3 (469-530)||(28477395-28477454)
chr3 (429-530)||(31531462-31531561)
chr3 (492-530)||(35055817-35055855)
chr3 (453-530)||(42891413-42891488)
chr3 (458-530)||(11393921-11393991)
chr3 (446-530)||(26121319-26121401)
chr3 (458-530)||(30476040-30476110)
chr3 (470-530)||(39617287-39617345)
chr3 (458-530)||(40645673-40645743)
chr3 (458-530)||(41727275-41727345)
chr3 (458-530)||(46048521-46048591)
chr3 (458-530)||(48901554-48901624)
chr3 (458-530)||(48903120-48903190)
chr3 (464-527)||(13084398-13084459)
chr3 (464-527)||(22659585-22659646)
chr3 (492-527)||(21932957-21932992)
chr3 (448-530)||(26043008-26043088)
chr3 (464-530)||(29676776-29676840)
chr3 (452-530)||(31650702-31650778)
chr3 (464-529)||(25750532-25750595)
chr3 (458-530)||(26998894-26998964)
chr3 (458-530)||(33287865-33287935)
chr3 (467-527)||(44083635-44083693)
chr3 (415-491)||(6902640-6902716)
chr3 (494-530)||(54425993-54426029)
[»] chr8 (34 HSPs)
chr8 (448-529)||(14577689-14577768)
chr8 (467-530)||(30262574-30262635)
chr8 (458-530)||(26878764-26878834)
chr8 (458-530)||(31746441-31746511)
chr8 (418-530)||(45203719-45203828)
chr8 (448-529)||(14522641-14522720)
chr8 (416-529)||(16644073-16644184)
chr8 (458-530)||(22590375-22590445)
chr8 (418-530)||(36437461-36437571)
chr8 (447-530)||(5191585-5191665)
chr8 (464-530)||(25888601-25888665)
chr8 (417-527)||(34882629-34882737)
chr8 (458-530)||(24962401-24962471)
chr8 (458-530)||(25198289-25198359)
chr8 (472-530)||(12762856-12762912)
chr8 (416-530)||(12998729-12998841)
chr8 (417-530)||(24276593-24276702)
chr8 (458-527)||(43980622-43980689)
chr8 (458-530)||(2562766-2562836)
chr8 (458-530)||(25185030-25185100)
chr8 (447-527)||(31673586-31673663)
chr8 (458-530)||(37956121-37956191)
chr8 (458-529)||(57225-57294)
chr8 (464-530)||(38770223-38770287)
chr8 (492-530)||(36309632-36309670)
chr8 (458-530)||(7172219-7172289)
chr8 (467-527)||(14739438-14739496)
chr8 (458-530)||(24512203-24512273)
chr8 (492-529)||(27194062-27194099)
chr8 (493-530)||(40517773-40517810)
chr8 (464-527)||(3006820-3006881)
chr8 (447-530)||(3113569-3113650)
chr8 (467-530)||(7772521-7772582)
chr8 (459-530)||(41541550-41541619)
[»] chr6 (22 HSPs)
chr6 (446-530)||(12514621-12514703)
chr6 (448-530)||(22410879-22410959)
chr6 (458-530)||(31945948-31946018)
chr6 (416-530)||(3887979-3888090)
chr6 (453-530)||(15981789-15981864)
chr6 (464-529)||(3729395-3729458)
chr6 (472-529)||(10669311-10669366)
chr6 (417-530)||(19838890-19839001)
chr6 (473-527)||(1514267-1514319)
chr6 (464-530)||(1763819-1763883)
chr6 (458-530)||(5084573-5084647)
chr6 (464-530)||(31780130-31780194)
chr6 (447-520)||(8644842-8644913)
chr6 (453-530)||(16327118-16327193)
chr6 (458-530)||(5895731-5895801)
chr6 (458-530)||(11302855-11302925)
chr6 (415-523)||(28238357-28238463)
chr6 (492-527)||(12514794-12514829)
chr6 (453-530)||(16350516-16350591)
chr6 (464-527)||(20522978-20523039)
chr6 (458-528)||(30248564-30248631)
chr6 (464-527)||(31536018-31536079)
[»] chr2 (36 HSPs)
chr2 (414-530)||(8384007-8384120)
chr2 (452-530)||(44424589-44424665)
chr2 (447-527)||(2131746-2131824)
chr2 (447-527)||(21012842-21012920)
chr2 (418-530)||(28264986-28265096)
chr2 (467-530)||(4398559-4398620)
chr2 (464-530)||(14420683-14420747)
chr2 (418-530)||(43709878-43709989)
chr2 (466-530)||(11071676-11071738)
chr2 (458-530)||(17663624-17663694)
chr2 (458-530)||(37355036-37355106)
chr2 (452-527)||(9718210-9718283)
chr2 (417-527)||(41865675-41865783)
chr2 (418-528)||(45214685-45214793)
chr2 (472-525)||(34042096-34042147)
chr2 (458-530)||(3645323-3645393)
chr2 (458-530)||(17250996-17251066)
chr2 (458-530)||(20361983-20362053)
chr2 (458-530)||(24774865-24774935)
chr2 (458-530)||(40346116-40346186)
chr2 (458-530)||(45150771-45150841)
chr2 (417-515)||(6275617-6275714)
chr2 (458-520)||(247660-247720)
chr2 (448-530)||(44421439-44421519)
chr2 (459-512)||(2917150-2917201)
chr2 (453-530)||(3337681-3337756)
chr2 (458-527)||(8065110-8065177)
chr2 (458-527)||(27297577-27297644)
chr2 (464-529)||(43650040-43650103)
chr2 (458-530)||(11459153-11459223)
chr2 (458-530)||(15851531-15851601)
chr2 (448-528)||(27749502-27749580)
chr2 (492-529)||(35453769-35453806)
chr2 (458-530)||(41665710-41665780)
chr2 (464-507)||(2395808-2395849)
chr2 (447-530)||(13477068-13477149)
[»] scaffold0005 (1 HSPs)
scaffold0005 (447-530)||(214607-214688)
[»] scaffold1091 (1 HSPs)
scaffold1091 (458-527)||(1951-2018)
[»] scaffold0012 (1 HSPs)
scaffold0012 (467-530)||(99852-99913)
[»] scaffold0182 (1 HSPs)
scaffold0182 (462-530)||(18693-18759)
[»] scaffold0038 (1 HSPs)
scaffold0038 (415-523)||(38519-38625)
[»] scaffold0013 (1 HSPs)
scaffold0013 (417-530)||(49095-49206)
[»] scaffold0166 (1 HSPs)
scaffold0166 (492-529)||(23686-23723)


Alignment Details
Target: chr1 (Bit Score: 487; Significance: 0; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 12 - 530
Target Start/End: Original strand, 43188656 - 43189174
Alignment:
Q  12 acttggccctttgggtcaacactaggactactccttaagtcggtagtggagcatccaattattttgaacggagttggattgactccaaacaagcaactcc 111  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43188656 acttggcccttttggtcaacactgggactactccttaagtcggtagtggagcatccaattattttgaacggagttggactgactccaaacaagcaactcc 43188755  T
Q  112 aggaatcaaactcatattctttttctatagaagaaccatgttgccacttgccaacccctcccaaaaactttggtaattgtttgcttttttctctctttca 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43188756 aggaatcaaactcatattctttttctatagaagaaccatgttgccacttgccaacccctcccaaaaactttggtaattgtttgcttttttctctctttca 43188855  T
Q  212 tttcttaagagagactcttctgtttcgttgtttgcttcactatcgggatagaggcgtgtatatctggtatcacgcaaagtttttgttttaaaggttaaga 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43188856 tttcttaagagagactcttctgtttcgttgtttgcttcactatcgggatagagccgtgtatatctggtatcacgcaaagtttttgttttaaaggttaaga 43188955  T
Q  312 aagttgggtggagcttattttaccttatatttttgttttatgcgctagcaaaaatatatacacacttgctctttattttacttcatgtactggcgaagta 411  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43188956 aagttgggtggagcttattttaccttatatttttgttttatgccgtagcaaaaatatatacacacttgctctttattttacttcatgtactggcgaagta 43189055  T
Q  412 gttttatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatg 511  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43189056 gttttatactccctccatccctatatctaagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatatgtctattttgtatg 43189155  T
Q  512 ttaatattaccaaattgtc 530  Q
    |||||||||||||||||||    
T  43189156 ttaatattaccaaattgtc 43189174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 43209020 - 43209199
Alignment:
Q  17 gccctttgggtcaacactaggactactccttaagtcggtagtggagcatccaattattttgaacggagttggattgactccaaacaagcaactccaggaa 116  Q
    ||||||||||| |||||| |||||| | |||||||||||||||  |||||  |||| |||||| | ||||| |  |||||||| ||| ||||||||||||    
T  43209020 gccctttgggtaaacactgggactaatgcttaagtcggtagtgcggcatcttattaatttgaatgaagttgtaccgactccaaccaaacaactccaggaa 43209119  T
Q  117 tcaaactcatattctttttctatagaagaaccatgttgccacttgccaacccctcccaaaaactttggtaattgtttgctt 197  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  43209120 tcgaactcatattctttttctatagaagaaccatgtttccacttgccaa-ccctcccaaaaacattggtaattgtttgctt 43209199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 418 - 529
Target Start/End: Original strand, 32152117 - 32152226
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||| ||| ||||| ||||||  |||||||||| ||||| |||||||||||||||||| |||||||  ||||||||||||||||| ||||||||    
T  32152117 tactccctccgtccttatatctaagcaccttttacatttttcacatttcttaagaaaagttgttggtgcaat--taatgtgtctattttgtgtgttaata 32152214  T
Q  518 ttaccaaattgt 529  Q
    ||||||||||||    
T  32152215 ttaccaaattgt 32152226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 418 - 527
Target Start/End: Complemental strand, 31808115 - 31808009
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    ||||||| |||||||||||| ||||||  |||| ||||| ||||| ||||| |||||||||||||||| |||||  ||||||||||||||| ||||||||    
T  31808115 tactcccaccatccctatatttaagcaccttttgcattt-tcacacttcttgagaaaagttgttagtgtaatta--atgtgtctattttgtgtgttaata 31808019  T
Q  518 ttaccaaatt 527  Q
    ||||||||||    
T  31808018 ttaccaaatt 31808009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 419 - 527
Target Start/End: Complemental strand, 13723621 - 13723515
Alignment:
Q  419 actccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatat 518  Q
    |||||||||||| || ||| ||||||   ||| ||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||| | |||||||    
T  13723621 actccctccatctctttatgtaagcaccctttgcatttttcacatttcttaagaaaagttgttagtgcaat--taatgtgtctattttgtgtattaatat 13723524  T
Q  519 taccaaatt 527  Q
    |||||||||    
T  13723523 taccaaatt 13723515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 303 - 376
Target Start/End: Original strand, 43209219 - 43209292
Alignment:
Q  303 aggttaagaaagttgggtggagcttattttaccttatatttttgttttatgcgctagcaaaaatatatacacac 376  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||  ||||||||||||| ||||||    
T  43209219 aggttaagaaagttgagtggagcttattttatcttatatttttgttttatgccatagcaaaaatatacacacac 43209292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 418 - 527
Target Start/End: Complemental strand, 4813606 - 4813499
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||| | ||||||||||||| |   |||| | ||| ||||| ||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||    
T  4813606 tactcccttcgtccctatatataacccccttttgcttttttcacatttcttaagaaaagttgttaatgcaatta--atgtgtctattttgtgtgttaata 4813509  T
Q  518 ttaccaaatt 527  Q
    ||||||||||    
T  4813508 ttaccaaatt 4813499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 447 - 530
Target Start/End: Original strand, 41737113 - 41737194
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| ||||| |||||||||||||||||||||| ||||| ||  |||||||||||| |||||||||||||||||||||    
T  41737113 ttttgcatttatcacacttcttaagaaaagttgttagtgtaattaaaa--tgtctattttgtgtgttaatattaccaaattgtc 41737194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 530
Target Start/End: Original strand, 38680465 - 38680544
Alignment:
Q  449 ttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||| ||||| |||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||| |||||||||    
T  38680465 ttacttttttcacatttcttaagaaaagttgttagtgtaatta--atgtgtctattttgtgtgttaatattatcaaattgtc 38680544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 416 - 527
Target Start/End: Original strand, 10842286 - 10842393
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    |||||||||| | ||||||||||||| |   |||||| ||| ||||| ||||||||||||||||||| ||||||  |||| |||||||||||  ||||||    
T  10842286 tatactcccttcgtccctatatataacccccttttacttttttcacatttcttaagaaaagttgttaatgcaat--taatatgtctattttg--tgttaa 10842381  T
Q  516 tattaccaaatt 527  Q
    ||||||||||||    
T  10842382 tattaccaaatt 10842393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 418 - 530
Target Start/End: Original strand, 25258289 - 25258399
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||  ||| ||||| ||||||  |||||||||| ||| | || |||||||||||||||||||||||  ||||||||||||||| | | || |||    
T  25258289 tactccctctgtccttatatttaagcaccttttacatttttcatattttttaagaaaagttgttagtgcaat--taatgtgtctattttatgtcttgata 25258386  T
Q  518 ttaccaaattgtc 530  Q
    |||||||||||||    
T  25258387 ttaccaaattgtc 25258399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 418 - 530
Target Start/End: Original strand, 31305277 - 31305387
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||| ||||||||| ||| |   |||| | ||| ||||| || ||||||||||||||| ||| |||||  |||||||||||||||||| |||||    
T  31305277 tactccctccgtccctatatgtaaaccccttttgcttttttcacatttattaagaaaagttgttggtgtaatta--atgtgtctattttgtatgctaata 31305374  T
Q  518 ttaccaaattgtc 530  Q
    |||||||||||||    
T  31305375 ttaccaaattgtc 31305387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 433 - 530
Target Start/End: Original strand, 32144285 - 32144380
Alignment:
Q  433 tatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||  |||| ||||| | ||| |||||||||||||||||| ||||| |||  |||||||||||||||  ||||||||||||||||||||    
T  32144285 tatatctaagcaccttttgcattttttacatttcttaagaaaagttgttggtgcattta--atgtgtctattttgtgcgttaatattaccaaattgtc 32144380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 28723748 - 28723690
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||||    
T  28723748 ttaagaaaagttgttagtgtaatta--atgtgtctattttgtgtgttaatattaccaaatt 28723690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 30336058 - 30336128
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||  ||| |||||  ||||||||||||||| |||||||||||||||||||||    
T  30336058 tcacatttcttaagaaaagttgtcggtgtaatta--atgtgtctattttgtgtgttaatattaccaaattgtc 30336128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 50692408 - 50692478
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| | ||||||||  ||||||||||||||| ||||| |||||||||||||||    
T  50692408 tcacatttcttaagaaaagttgtcaatgcaatta--atgtgtctattttgtgtgttagtattaccaaattgtc 50692478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 459 - 526
Target Start/End: Complemental strand, 15911655 - 15911590
Alignment:
Q  459 cacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaat 526  Q
    |||| |||||||||||||||||||||| | |||  ||||||||||||||| |||||||||||||||||    
T  15911655 cacatttcttaagaaaagttgttagtgtactta--atgtgtctattttgtgtgttaatattaccaaat 15911590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 417 - 528
Target Start/End: Original strand, 40261554 - 40261662
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||||||||| |||||||||  || || |||||||  || ||||| |||||| ||||||| |||||||||||||  |||||| |||||||| |||||||    
T  40261554 atactccctccgtccctatatgcaaacactttttaccctt-tcacatttcttatgaaaagtagttagtgcaatta--atgtgtttattttgtgtgttaat 40261650  T
Q  517 attaccaaattg 528  Q
    |||| |||||||    
T  40261651 attatcaaattg 40261662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 530
Target Start/End: Complemental strand, 15512927 - 15512815
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    |||||||||||| ||||||||| ||| |    ||| | ||| ||||| |||||||||||||||||||||| | |||  ||||||||||||| | ||||||    
T  15512927 tatactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtagtta--atgtgtctattttatgtgttaa 15512830  T
Q  516 tattaccaaattgtc 530  Q
    |||||| ||||||||    
T  15512829 tattactaaattgtc 15512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 530
Target Start/End: Complemental strand, 28949110 - 28948998
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    |||||||||||| ||||||||| ||| |    ||| | ||| ||||| |||||||||||||||||||||| | |||  ||||||||||||| | ||||||    
T  28949110 tatactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtagtta--atgtgtctattttatgtgttaa 28949013  T
Q  516 tattaccaaattgtc 530  Q
    |||||| ||||||||    
T  28949012 tattactaaattgtc 28948998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 47754740 - 47754676
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||| |||| |||||||||||||||  ||||||||||||| | |||||||||||||||||||||    
T  47754740 ttcttaaaaaaaattgttagtgcaatta--atgtgtctattttttgtgttaatattaccaaattgtc 47754676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 513
Target Start/End: Original strand, 4081838 - 4081932
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgtt 513  Q
    ||||||||||||||||| ||| ||| ||  |||| ||||| |||||||| |||| ||||||||||||  ||||  |||||||||||| |||||||||    
T  4081838 atactccctccatccctgtatgtaaacatattttgcatttttcacaatttttaaaaaaagttgttagaacaat--taatgtgtctatattgtatgtt 4081932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 16582532 - 16582602
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  16582532 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgtc 16582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 44335288 - 44335358
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||| ||||||||| |||| |||||  |||||||| |||||| |||||||||||||||||||||    
T  44335288 tcacatttcttaataaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattaccaaattgtc 44335358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 528
Target Start/End: Complemental strand, 23982737 - 23982628
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||||||||| ||||||||| ||||     ||| ||||| ||||| ||||||||||||||||| | || |||||  |||||||| |||||| |||||||    
T  23982737 atactccctccgtccctatatgtaagtcccctttgcatttttcacatttcttaagaaaagttgtcaatgtaatta--atgtgtctgttttgtgtgttaat 23982640  T
Q  517 attaccaaattg 528  Q
    |||| |||||||    
T  23982639 attatcaaattg 23982628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 492 - 527
Target Start/End: Complemental strand, 16395620 - 16395585
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||||||||||||||||||||||||    
T  16395620 taatgtgtctattttgtatgttaatattaccaaatt 16395585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 530
Target Start/End: Original strand, 2342935 - 2342973
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  2342935 taatgtgtctattttgtgtgttaatattaccaaattgtc 2342973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 530
Target Start/End: Complemental strand, 8984806 - 8984695
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||||||||  ||||||||| |||||    ||| ||||| ||||| || ||||| ||| ||||||||| |||||  |||||||| |||||| |||||||    
T  8984806 atactccctctgtccctatatgtaagcctcctttgcatttttcacattttttaaggaaaattgttagtgtaatta--atgtgtctgttttgtgtgttaat 8984709  T
Q  517 attaccaaattgtc 530  Q
    ||||| ||||||||    
T  8984708 attactaaattgtc 8984695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 530
Target Start/End: Complemental strand, 51390681 - 51390571
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattctt-aagaaaagttgttagtgcaattataatgtgtctattttgtatgtta 514  Q
    |||||||||||| ||||||||| ||||||  ||||  |||| ||||| ||||| ||||| | |||||| ||||||  ||||||||||||||||| |||      
T  51390681 tatactccctccgtccctatatctaagcaccttttgaatttttcacatttcttaaagaagaattgttaatgcaat--taatgtgtctattttgtgtgt-- 51390586  T
Q  515 atattaccaaattgtc 530  Q
     |||||||||||||||    
T  51390585 -tattaccaaattgtc 51390571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 5085193 - 5085123
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || |||||||||||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  5085193 tcacattttttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgtc 5085123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 32047441 - 32047511
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||||  |||||| | |||||| |||||||||||| ||||||||    
T  32047441 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtttgttttgtgtgttaatattacgaaattgtc 32047511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 33231839 - 33231909
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||| ||||||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  33231839 tcacatttcttaaaaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgtc 33231909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 48721972 - 48721902
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||| ||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  48721972 tcacatttcttaagaaaagctgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgtc 48721902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 4081931 - 4081992
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||| ||| ||||||||  |||||| || |||||||||||||||||| |||||    
T  4081931 ttcttaagaaaagttattaatgcaatta--atgtgtttagtttgtatgttaatattactaaatt 4081992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 530
Target Start/End: Original strand, 25063218 - 25063279
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||||| ||| |||||  ||||||||||| |||||| ||||||||||||| |||||||    
T  25063218 ttaagaaaagttattaatgcaa--ataatgtgtctgttttgtgtgttaatattacctaattgtc 25063279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 530
Target Start/End: Complemental strand, 291704 - 291669
Alignment:
Q  495 tgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||||||||||||| ||||||||    
T  291704 tgtgtctattttgtatgttaatattactaaattgtc 291669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 529
Target Start/End: Original strand, 3072147 - 3072207
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    |||||||||||||||||||||||  |||||||| |||||| | |||||||||||  |||||||    
T  3072147 ttaagaaaagttgttagtgcaat--taatgtgtttattttatgtgttaatattattaaattgt 3072207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 529
Target Start/End: Complemental strand, 28679916 - 28679856
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    |||| ||||||||||| ||||||||  ||||||||||||||| |||||||||||  |||||||    
T  28679916 ttaaaaaaagttgttaatgcaatta--atgtgtctattttgtgtgttaatattattaaattgt 28679856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 530
Target Start/End: Original strand, 13145449 - 13145487
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  13145449 taatatgtctgttttgtatgttaatattaccaaattgtc 13145487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 30898667 - 30898600
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| |||||||||||| |||| |||| |||||  |||||||| |||| | ||||||||||||||||||    
T  30898667 tcacatttcttaagaaaaattgtcagtgtaatta--atgtgtctgttttatgtgttaatattaccaaatt 30898600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 530
Target Start/End: Complemental strand, 47071033 - 47070995
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  47071033 taatgtgtctattttatgtgttaatattaccaaattgtc 47070995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 3143402 - 3143472
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| | || |||||  ||||||||  ||||| |||||||||||| ||||||||    
T  3143402 tcacatttcttaagaaaagttgtcattgtaatta--atgtgtctgctttgtgtgttaatattacaaaattgtc 3143472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 13352833 - 13352903
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||| || |||||| ||||||  |||||||| |||| | ||||||||||| |||||||||    
T  13352833 tcacatttcttaagaaatgtagttagttcaatta--atgtgtctgttttatgtgttaatattagcaaattgtc 13352903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 34696987 - 34696917
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || |||||||||||||| |||| |||||  || ||||| |||||| |||||||||||| ||||||||    
T  34696987 tcacattttttaagaaaagttgtcagtgtaatta--atatgtctgttttgtgtgttaatattacgaaattgtc 34696917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 530
Target Start/End: Original strand, 20564763 - 20564844
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| ||||| || ||||||||||||| ||||| || ||  ||||||||| ||| | |||||||||||| ||||||||    
T  20564763 ttttgcatttttcacatttgttaagaaaagttgatagtgtaacta--atgtgtctactttatgtgttaatattacaaaattgtc 20564844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 530
Target Start/End: Complemental strand, 31373844 - 31373733
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||||||||||||||||||| |||||| ||||| ||||| ||||| |||||||||||| ||||||| |||||  ||||||||||||||||| |||||||    
T  31373844 atactccctccatccctatatctaagcactttttgcatttttcacatttcttaagaaaaattgttagggcaat--taatgtgtctattttgtgtgttaat 31373747  T
Q  517 attaccaaattgtc 530  Q
    ||||| ||||||||    
T  31373746 attactaaattgtc 31373733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 448 - 527
Target Start/End: Complemental strand, 37491734 - 37491657
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  37491734 tttacttttttcacatttcttaagaaaagttgttagtgcaatta--atgtgtctattttatatgttaatattaccaaatt 37491657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 29992981 - 29993042
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  29992981 ttcttaagaaaagttgttagtgcaatta--atgtgtctattttgtatgttaatactaccaaatt 29993042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 529
Target Start/End: Complemental strand, 19236213 - 19236103
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    ||||||||||||||||||| || ||| |  ||||| ||||| ||||| ||| |||||||||||||||||| |||||  |||||||  |||||||||||||    
T  19236213 tatactccctccatccctaaatgtaaccctttttt-catttttcacatttcgtaagaaaagttgttagtgtaatta--atgtgtcggttttgtatgttaa 19236117  T
Q  516 tattaccaaattgt 529  Q
    |||||||| |||||    
T  19236116 tattaccatattgt 19236103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 429 - 530
Target Start/End: Complemental strand, 46783975 - 46783876
Alignment:
Q  429 tccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattg 528  Q
    ||||||||| ||||||  ||||| |||| ||||| ||||||||||||||| |||||| |||  |||||||||||| || | |||||||||||||||||||    
T  46783975 tccctatatctaagcaccttttatatttttcacatttcttaagaaaagttattagtgaaat--taatgtgtctatcttatgtgttaatattaccaaattg 46783878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 453 - 530
Target Start/End: Original strand, 27213482 - 27213557
Alignment:
Q  453 atttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| |||||||||||||||||||||||||   |||| |||||||||||| |||||||||||| ||||||||    
T  27213482 atttttcacatttcttaagaaaagttgttagtgcaa--ctaatatgtctattttgtgtgttaatattactaaattgtc 27213557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 418 - 527
Target Start/End: Original strand, 40740911 - 40741017
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||| ||||||||||||| |  ||||  | ||| ||||| ||||||||||||||||||| || |||||  || |||||||||||| ||||||||    
T  40740911 tactccctccgtccctatatataaccccttttatctttt-tcacatttcttaagaaaagttgttaatgtaatta--atatgtctattttgtgtgttaata 40741007  T
Q  518 ttaccaaatt 527  Q
    ||||||||||    
T  40741008 ttaccaaatt 40741017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 452 - 527
Target Start/End: Original strand, 48193609 - 48193682
Alignment:
Q  452 catttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||| || ||||||||| ||||||||| |||||  ||||||||||||||| ||||||||||||||||||    
T  48193609 catttttcacattttttaagaaaaattgttagtgtaatta--atgtgtctattttgtgtgttaatattaccaaatt 48193682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 20123450 - 20123520
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||||  |||||||| |||||| ||||||||||| |||||||||    
T  20123450 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattatcaaattgtc 20123520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 530
Target Start/End: Complemental strand, 2276693 - 2276612
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||| ||||| ||||||| ||||||||| |||| | |||  || ||||| |||||| |||||||||||||||||||||    
T  2276693 ttttacatttttcacatttcttaacaaaagttgtcagtgtagtta--atttgtctgttttgtgtgttaatattaccaaattgtc 2276612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 527
Target Start/End: Complemental strand, 26201067 - 26201006
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||| |||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  26201067 ttcttaagaaaagttattagtgcaattat--tgtgtctattttgtgtattaatattatcaaatt 26201006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 527
Target Start/End: Original strand, 28663714 - 28663822
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    |||||||||||| ||||||||||||| |  ||||    ||| ||||| ||||||||||| ||||||| | ||||||  ||||||||||||||| ||||||    
T  28663714 tatactccctccgtccctatatataaccccttttgttttttttcacatttcttaagaaa-gttgttaatacaatta--atgtgtctattttgtgtgttaa 28663810  T
Q  516 tattaccaaatt 527  Q
    ||||| ||||||    
T  28663811 tattatcaaatt 28663822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 4089605 - 4089538
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||||||||||||||| |||| |||||  |||||||| |||||| |||||||||||| |||||    
T  4089605 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaaatt 4089538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 530
Target Start/End: Original strand, 25750363 - 25750438
Alignment:
Q  453 atttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| ||||||| ||||||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  25750363 atttttcacatttcttaaaaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacaaaattgtc 25750438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 6376238 - 6376168
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| ||||||||| |||||  |||| ||| |||||| |||||||||||| ||||||||    
T  6376238 tcacatttcttaagaaaaattgttagtgtaatta--atgtctctgttttgtgtgttaatattactaaattgtc 6376168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 459 - 527
Target Start/End: Original strand, 21752529 - 21752595
Alignment:
Q  459 cacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||| ||||||| ||||||||||||||||||  |||| ||| ||||||||  |||||||||||||||||    
T  21752529 cacatttcttaaaaaaagttgttagtgcaat--taatttgtttattttgtgggttaatattaccaaatt 21752595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 472 - 527
Target Start/End: Complemental strand, 21392984 - 21392931
Alignment:
Q  472 aaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||| |||||||||||||||  ||||||||||||||  ||||||||||||||||||    
T  21392984 aaaatttgttagtgcaatta--atgtgtctattttgagtgttaatattaccaaatt 21392931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 528
Target Start/End: Complemental strand, 29636186 - 29636077
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||||||||| ||||||||| ||| |    ||| |||||  |||| || |||||||||||||| | || |||||  |||||||| |||||| |||||||    
T  29636186 atactccctccgtccctatatgtaaaccccctttgcattttacacattttttaagaaaagttgtcaatgtaatta--atgtgtctgttttgtgtgttaat 29636089  T
Q  517 attaccaaattg 528  Q
    ||||||||||||    
T  29636088 attaccaaattg 29636077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 525
Target Start/End: Complemental strand, 5334491 - 5334435
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaa 525  Q
    ||||||||| ||||||||| |||||  |||||| | |||||||||||||||||||||||    
T  5334491 ttaagaaaaattgttagtgtaatta--atgtgtttgttttgtatgttaatattaccaaa 5334435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 529
Target Start/End: Complemental strand, 19477512 - 19477452
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||||||||||||||||| |||||  ||| || |||||| ||||||||| ||||||||||||    
T  19477512 ttaagaaaagttgttagtgtaatta--atgcgtttattttatatgttaatgttaccaaattgt 19477452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 27163007 - 27162939
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||| |||||||||||||||||  |||||||  |||||||| | |||||||| ||||||||||    
T  27163007 tcacatttcttaagtaaagttgttagtgcaat--taatgtg--tattttgtgttttaatattgccaaattgtc 27162939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 530
Target Start/End: Complemental strand, 36726271 - 36726208
Alignment:
Q  465 tcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||| | |||||||||| |||||  |||||| | |||||| |||||||||||||||||||||    
T  36726271 tcttaagagatgttgttagtgtaatta--atgtgtttgttttgtgtgttaatattaccaaattgtc 36726208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 21388242 - 21388312
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| ||||  ||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  21388242 tcacatttcttaagaaaatttgtcggtgtaatta--atgtgtctgttttgtgtgttaatattactaaattgtc 21388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 21801161 - 21801091
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||   || |||  |||||||||| |||||| |||||||||||| ||||||||    
T  21801161 tcacatttcttaagaaaagttgtcgatgtaat--taatgtgtctgttttgtgtgttaatattactaaattgtc 21801091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 529
Target Start/End: Original strand, 27170007 - 27170080
Alignment:
Q  453 atttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    |||| ||||| ||||||||| ||  ||||||||||||  |||| |||||||||||| || |||||||||||||||||    
T  27170007 atttttcacatttcttaagacaacatgttagtgcaat--taatttgtctattttgtgtg-taatattaccaaattgt 27170080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 37048035 - 37048105
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||| | |||| |||  |||||||||| |||||| ||||||| || ||||||||||    
T  37048035 tcacatttcttaagaaaagttatcagtgtaat--taatgtgtctgttttgtgtgttaatgttcccaaattgtc 37048105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 37673737 - 37673807
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||| ||||| |||| |||||  |||||||| |||||| |||||||||||  ||||||||    
T  37673737 tcacatttcttaagaaatgttgtgagtgtaatta--atgtgtctgttttgtgtgttaatattatgaaattgtc 37673807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 48767564 - 48767634
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||| ||| ||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  48767564 tcacatttcttaaaaaacgttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgtc 48767634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 527
Target Start/End: Original strand, 4068413 - 4068466
Alignment:
Q  472 aaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||| ||||||||  || | |||||||||||||||||||||| ||||||    
T  4068413 aaaagttgttaatgcaatta--atatatctattttgtatgttaatattatcaaatt 4068466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 40211373 - 40211312
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||| ||||| ||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  40211373 ttaagaaaaattgtttgtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgtc 40211312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 527
Target Start/End: Complemental strand, 42993287 - 42993226
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||||||| | ||||||  | ||||||||||| | ||||||||||| ||||||    
T  42993287 ttcttaagaaaagttgttaatacaatta--acgtgtctattttatgtgttaatattatcaaatt 42993226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 4e-27; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 429 - 530
Target Start/End: Complemental strand, 41920172 - 41920073
Alignment:
Q  429 tccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattg 528  Q
    ||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||  |||| | |||||||||| |||||||||||||||||||    
T  41920172 tccctatatataagcaccttttacatttttcacatttcttaagaaaagttgttagtgcaat--taatatttctattttgtgtgttaatattaccaaattg 41920075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 417 - 527
Target Start/End: Original strand, 31486446 - 31486555
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgt-cacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    ||||||||||| ||||||||| |||||  ||||| | ||| | |||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  31486446 atactccctccgtccctatatgtaagccctttttgctttttttcacatttcttaagaaaagttgttagtgcaat--taatgtgtctattttgtgtgttaa 31486543  T
Q  516 tattaccaaatt 527  Q
    |||||| |||||    
T  31486544 tattactaaatt 31486555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 448 - 530
Target Start/End: Complemental strand, 56373459 - 56373379
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| |||| ||||| |||||||||||| |||||||||||||||  |||||| |||||||| |||||||||||||||||||||    
T  56373459 tttatatttttcacatttcttaagaaaaattgttagtgcaatta--atgtgtttattttgtgtgttaatattaccaaattgtc 56373379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 530
Target Start/End: Complemental strand, 14602771 - 14602690
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||| ||| ||||| |||||||||||||||||||||| |||  ||||||||||| ||| | |||||||||||||||||||||    
T  14602771 ttttacttttttcacatttcttaagaaaagttgttagtgtaat--taatgtgtctagtttttgtgttaatattaccaaattgtc 14602690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 452 - 530
Target Start/End: Original strand, 29584888 - 29584964
Alignment:
Q  452 catttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||| |||||||||||| ||||||||| |||||  ||||||||||| ||| |||||||||||||||||||||    
T  29584888 catttttcacatttcttaagaaaaattgttagtgtaatta--atgtgtctattctgtgtgttaatattaccaaattgtc 29584964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 458 - 529
Target Start/End: Complemental strand, 5416972 - 5416905
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||| |||||||||||||||||| |||    ||||||||||||||||||| ||||||||||||||||||||    
T  5416972 tcacatttcttaagaaaagttgtttgtg----tataatgtgtctattttgtttgttaatattaccaaattgt 5416905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 37175126 - 37175057
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||| ||| |||||  ||||||||||||||| |||||||||||||||||||||    
T  37175126 tcacatttcttaagaaaagttgtt-gtgtaatta--atgtgtctattttgtgtgttaatattaccaaattgtc 37175057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 38136355 - 38136425
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| ||||||||| |||||  ||||||||||||||| ||||||||||| |||||||||    
T  38136355 tcacatttcttaagaaaatttgttagtgtaatta--atgtgtctattttgtgtgttaatattatcaaattgtc 38136425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 419 - 527
Target Start/End: Complemental strand, 45079955 - 45079849
Alignment:
Q  419 actccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatat 518  Q
    ||||||| | ||| ||||| |||||| ||||||| ||| ||||| |||||||||||||| |||||||||||  |||  | |||||||||| |||||||||    
T  45079955 actcccttcgtccttatatgtaagcattttttacctttttcacatttcttaagaaaagtagttagtgcaat--taacatatctattttgtgtgttaatat 45079858  T
Q  519 taccaaatt 527  Q
    || ||||||    
T  45079857 tagcaaatt 45079849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 416 - 527
Target Start/End: Original strand, 19654386 - 19654495
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    ||||||| |||| ||||||||| ||| ||  ||||| |||| ||||| ||||||||||||  |||||||| |||  ||||||||||||||| | |||| |    
T  19654386 tatactctctccgtccctatatgtaaacatcttttatatttttcacatttcttaagaaaaactgttagtgtaat--taatgtgtctattttatgtgttga 19654483  T
Q  516 tattaccaaatt 527  Q
    ||||||||||||    
T  19654484 tattaccaaatt 19654495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 3094188 - 3094252
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||||||||||||  | |||||  ||||||||||||||| |||||||||||||||||||||    
T  3094188 ttcttaagaaaagttgttaaagtaatta--atgtgtctattttgtgtgttaatattaccaaattgtc 3094252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 527
Target Start/End: Original strand, 39414196 - 39414303
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||  ||||||||||||| |   |||||| ||| ||| | |||||||||||||||| || ||||||  |||| |||||||||||| ||||||||    
T  39414196 tactccctctgtccctatatataaccctgttttacttttttcatatttcttaagaaaagttgataatgcaat--taatatgtctattttgtgtgttaata 39414293  T
Q  518 ttaccaaatt 527  Q
    ||| ||||||    
T  39414294 ttatcaaatt 39414303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 12624696 - 12624766
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||||||| |||  ||||||| ||||||| | |||||||||||| ||||||||    
T  12624696 tcacatttcttaagaaaagttgttagtgtaat--taatgtgactattttatgtgttaatattactaaattgtc 12624766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 22651464 - 22651534
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| || ||| || |||||  |||||| ||||||||||||||||||||||||||||||    
T  22651464 tcacatttcttaagaaaatttattaatgtaatta--atgtgtttattttgtatgttaatattaccaaattgtc 22651534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 33246593 - 33246535
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||||||| ||||| |||||  ||||||||| ||||||||||||||||||    
T  33246593 ttaagaaaagttgttagtgtaattaaaatgt--ctattttgtgtgttaatattaccaaatt 33246535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 526
Target Start/End: Original strand, 34543702 - 34543768
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaat 526  Q
    ||||| |||||||||||||||||  ||| |||||  ||||||||||||||| |||||||||||||||||    
T  34543702 tcacatttcttaagaaaagttgtccgtgtaatta--atgtgtctattttgtgtgttaatattaccaaat 34543768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 13096638 - 13096577
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||||| |||||  |||||||| | |||| |||||||||||||||||||||    
T  13096638 ttaagaaaagttgttagtgtaatta--atgtgtctgtgttgtgtgttaatattaccaaattgtc 13096577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 529
Target Start/End: Complemental strand, 20262499 - 20262430
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||| ||||||||||||||||| |||| |||||  |||||||| |||||| |||||||||||| |||||||    
T  20262499 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgt 20262430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 521
Target Start/End: Original strand, 20791933 - 20791988
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattac 521  Q
    |||||||||||||||| |||||||||  |||| |||||||||||| ||||||||||||    
T  20791933 ttcttaagaaaagttggtagtgcaat--taatatgtctattttgtgtgttaatattac 20791988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 28116610 - 28116543
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| || ||||||||||||||||||| |||||  || |||||||||||| |||||||||| |||||||    
T  28116610 tcacattttttaagaaaagttgttagtgtaatta--atatgtctattttgtgtgttaatattgccaaatt 28116543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 30153327 - 30153260
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||||||||||||||| |||| |||||  |||||||| |||||| || |||||||||||||||    
T  30153327 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgataatattaccaaatt 30153260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 25477225 - 25477295
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||||  |||||||| |||| | |||||||||||| ||||||||    
T  25477225 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttatgtgttaatattacaaaattgtc 25477295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 527
Target Start/End: Complemental strand, 48472591 - 48472533
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||||||||||| |||| |||||  ||||||||||||||| |||||||||||| |||||    
T  48472591 ttaagaaaagttgtcagtgtaatta--atgtgtctattttgtgtgttaatattacgaaatt 48472533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 50782778 - 50782848
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||  |||||||||| |||||| | |||||||||| ||||||||    
T  50782778 tcacatttcttaagaaaagttgtcagtgtaat--taatgtgtctgttttgtgtcttaatattacgaaattgtc 50782848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 10602302 - 10602241
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||| ||||| |||||  || |||||||||||| |||||||||||| ||||||||    
T  10602302 ttaagaaaagttggtagtgtaatta--atttgtctattttgtgtgttaatattactaaattgtc 10602241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 20016525 - 20016590
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| || |||||||| || |||||||||||||     |||||||||||||||||||||||||||||||    
T  20016525 tcacattttttaagaaaggtagttagtgcaattaa----tgtctattttgtatgttaatattaccaaatt 20016590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 530
Target Start/End: Original strand, 46729314 - 46729375
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  46729314 ttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgtc 46729375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 527
Target Start/End: Original strand, 7002142 - 7002250
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattc-ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    |||||||||| ||||||||||||| |   |||| | ||| ||||| ||| ||||||||| |||||| ||||||  |||||| | |||||| | |||||||    
T  7002142 tactccctccgtccctatatataacccccttttgcttttttcacatttctttaagaaaaattgttaatgcaat--taatgtttatattttatgtgttaat 7002239  T
Q  517 attaccaaatt 527  Q
    |||||||||||    
T  7002240 attaccaaatt 7002250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 20293743 - 20293817
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaatta--taatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||||  |||||||| |||||| |||| |||||||||  |||||||    
T  20293743 tcacatttcttaagaaaagttgtcagtgtaattaattaatgtgtatattttttatgctaatattactgaattgtc 20293817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 530
Target Start/End: Complemental strand, 22750953 - 22750877
Alignment:
Q  452 catttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||| |||||||||||||||||  ||| |||||  |||| ||| |||||| | |||||||||||||||||||    
T  22750953 catttttcacatttcttaagaaaagttgtctgtgtaatta--atgtatctgttttgtgtattaatattaccaaattgtc 22750877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 530
Target Start/End: Original strand, 26203088 - 26203200
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    |||||||||||| ||||||||| |||||    ||||| |||  |||| || |||||||||||||||| || |||  |||||| | |||||| | ||||||    
T  26203088 tatactccctccgtccctatatgtaagccccctttactttttccacatttattaagaaaagttgttactgtaat--taatgtatatattttatgtgttaa 26203185  T
Q  516 tattaccaaattgtc 530  Q
    |||||| ||||||||    
T  26203186 tattacaaaattgtc 26203200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 526
Target Start/End: Original strand, 51787765 - 51787837
Alignment:
Q  452 catttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaat 526  Q
    ||||| ||||| |||||||||||||||||  ||| |||||  |||||||| |||||| |||||||||||| ||||    
T  51787765 catttttcacatttcttaagaaaagttgtcggtgtaatta--atgtgtctgttttgtgtgttaatattacgaaat 51787837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 16070431 - 16070498
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||||||||| | ||| |||| |||||  |||||||| |||||| ||||||||||||||||||    
T  16070431 tcacatttcttaagaaatgctgtcagtgtaatta--atgtgtctgttttgtgtgttaatattaccaaatt 16070498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 20291340 - 20291407
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| |||||||||||||||| || || |||||  |||||||||||||||  ||||||||||| |||||    
T  20291340 tcacatttcttaagaaaagttggtaatgtaatta--atgtgtctattttgtgggttaatattactaaatt 20291407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 37625230 - 37625163
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||||||||||||||| |||  |||||  |||||| |||||||| |||||||||||| |||||    
T  37625230 tcacatttcttaagaaaagttgtcagtataatta--atgtgtttattttgtgtgttaatattactaaatt 37625163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 528
Target Start/End: Complemental strand, 45628170 - 45628111
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattg 528  Q
    ||||||||||||||||||| ||||   |||||||| |||||| | |||||||||||||||||    
T  45628170 ttaagaaaagttgttagtgtaattg--atgtgtctgttttgtgtattaatattaccaaattg 45628111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 527
Target Start/End: Complemental strand, 10541372 - 10541295
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||||||| | ||| |||| |||||||||||||| ||||||||  |||| | |||||||| | ||||||||||||||||    
T  10541372 ttttacattttt-acatttctaaagaaaagttgttaatgcaatta--atgtatatattttgtgtattaatattaccaaatt 10541295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 39237694 - 39237624
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || |||||||||||||| |||| |||||  |||| ||| |||||| |||||||||||| ||||||||    
T  39237694 tcacattttttaagaaaagttgtcagtgtaatta--atgtatctgttttgtgtgttaatattacgaaattgtc 39237624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 530
Target Start/End: Original strand, 5932895 - 5932956
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||||||| |||| |||||  |||||| | |||||| ||||||||||| |||||||||    
T  5932895 ttaagaaaagttgtcagtgtaatta--atgtgtttgttttgtgtgttaatattatcaaattgtc 5932956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 530
Target Start/End: Complemental strand, 38972273 - 38972161
Alignment:
Q  415 ttatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgtta 514  Q
    ||||||||||||| ||||||||| ||| ||  |||||||||| ||||| |||||||||||||||||||||| |||  ||||||||||| |||  ||||||    
T  38972273 ttatactccctccgtccctatatgtaaacacattttacatttttcacatttcttaagaaaagttgttagtgtaat--taatgtgtcta-tttaaatgtta 38972177  T
Q  515 atattaccaaattgtc 530  Q
    ||||||||||||||||    
T  38972176 atattaccaaattgtc 38972161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 530
Target Start/End: Original strand, 32067787 - 32067898
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||| ||||| || |||||| |||||  ||| ||| ||| | ||| |||||||||||| | ||||||||||||   ||||||||||||||| |||||||    
T  32067787 atacttcctccgtctctatatgtaagccctttgtactttttttacatttcttaagaaaaatagttagtgcaattc--atgtgtctattttgtgtgttaat 32067884  T
Q  517 attaccaaattgtc 530  Q
    ||||||||||||||    
T  32067885 attaccaaattgtc 32067898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 21574984 - 21574914
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||| ||| |||||| | |||  |||||||||||||||||||||||||||||||||||||    
T  21574984 tcacatttcttaagaaatgtttttagtgtactta--atgtgtctattttgtatgttaatattaccaaattgtc 21574914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 29866189 - 29866259
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||||||||||||  |||| ||||| |||||| ||||||||||||||| |||||    
T  29866189 tcacatttcttaagaaaagttgttagtgcaat--taatatgtcttttttgtgtgttaatattaccaagttgtc 29866259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 600771 - 600835
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||||| |||||||||||||||  ||||||||||| ||| ||||||||||| |||||||||    
T  600771 ttcttaagaaaacttgttagtgcaatta--atgtgtctattatgtgtgttaatattatcaaattgtc 600835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 4857602 - 4857528
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaatta--taatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||| |||||||||||||| |||||  ||||||||||||||| | |||||||||||| ||||||||    
T  4857602 tcacatttcttaataaaagttgttagtgtaattaattaatgtgtctattttatgtgttaatattactaaattgtc 4857528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 20946093 - 20946157
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||| ||||||||||||||||  | ||||||||||||| ||||||||||| |||||||||    
T  20946093 ttcttaagaaacgttgttagtgcaatta--acgtgtctattttgtgtgttaatattatcaaattgtc 20946157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 530
Target Start/End: Complemental strand, 39690632 - 39690520
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    |||||||||||| ||||||||| ||| |    ||| | ||| ||||| |||||||||||||||||||||| | |||  ||||||||||||| | ||||||    
T  39690632 tatactccctccgtccctatatgtaacccccctttgcttttttcacatttcttaagaaaagttgttagtgtagtta--atgtgtctattttatgtgttaa 39690535  T
Q  516 tattaccaaattgtc 530  Q
    |||||| ||||||||    
T  39690534 tattactaaattgtc 39690520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 3559131 - 3559061
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| ||||| ||  |||||  ||||||||||||||| |||||||||||||||||||||    
T  3559131 tcacatttcttaagaaaaattgttggtataatta--atgtgtctattttgtgtgttaatattaccaaattgtc 3559061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 530
Target Start/End: Original strand, 4745136 - 4745197
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||| |||||||||||||  |||||| ||||||||  ||||||||||||||||||||    
T  4745136 ttaagaaaagtagttagtgcaatta--atgtgtttattttgtgggttaatattaccaaattgtc 4745197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 15898561 - 15898497
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||| |||| |||||  |||||||| |||||| ||||||||||| |||||||||    
T  15898561 ttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattatcaaattgtc 15898497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 530
Target Start/End: Original strand, 27587828 - 27587908
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||| ||||| ||||||||||||||||| |||  |||||  |||||||| |||||| |||||||||||| ||||||||    
T  27587828 tttacttttttcacatttcttaagaaaagttgtcagtataatta--atgtgtctgttttgtgtgttaatattactaaattgtc 27587908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 36177298 - 36177362
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||| | |||| |||||  ||||||||||||||| |||||||||||| ||||||||    
T  36177298 ttcttaagaaaagttatcagtgtaatta--atgtgtctattttgtgtgttaatattacaaaattgtc 36177362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 27642502 - 27642569
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| |||||||||||||||||||||| | |  ||||||||||||||| | |||||||||||| |||||    
T  27642502 tcacatttcttaagaaaagttgttagtgtagt--taatgtgtctattttatgtgttaatattactaaatt 27642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 523
Target Start/End: Complemental strand, 43060614 - 43060551
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattacca 523  Q
    ||||| || |||| |||||||||||||| |||||  ||||||||||||||| ||||||||||||||    
T  43060614 tcacattttttaataaaagttgttagtgtaatta--atgtgtctattttgtgtgttaatattacca 43060551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 3247378 - 3247308
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||  |||| |||||  || ||||| ||||||||||||||||||| ||||||||    
T  3247378 tcacatttcttaagaaaagttgacagtgtaatta--atatgtctgttttgtatgttaatattacgaaattgtc 3247308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 418 - 530
Target Start/End: Original strand, 21912081 - 21912190
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||| |||||||||||||||   |||  | ||| ||||| || ||||||||||||||||||| | |||  ||||||||||||| | ||||||||    
T  21912081 tactccctccgtccctatatataagcccctttg-cttttttcacatttattaagaaaagttgttagtgtagtta--atgtgtctattttatgtgttaata 21912177  T
Q  518 ttaccaaattgtc 530  Q
    |||  ||||||||    
T  21912178 ttattaaattgtc 21912190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 529
Target Start/End: Complemental strand, 10523369 - 10523309
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    |||||||||||| | |||| |||||  |||||||| |||||| ||||||||||||||||||||    
T  10523369 ttaagaaaagttatcagtgtaatta--atgtgtctgttttgtgtgttaatattaccaaattgt 10523309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 527
Target Start/End: Original strand, 10934038 - 10934073
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||||||| |||||||||||||||||||||||||    
T  10934038 taatgtgtctgttttgtatgttaatattaccaaatt 10934073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 521
Target Start/End: Original strand, 11980725 - 11980777
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattac 521  Q
    |||| |||||||||||||| |||||  ||||||||||||||| ||||||||||||    
T  11980725 ttaataaaagttgttagtgtaatta--atgtgtctattttgtgtgttaatattac 11980777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 25017772 - 25017708
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||| ||||| |||  |||||  |||||||| |||||| |||||||||||||||||||||    
T  25017772 ttcttaagaaatgttgtcagtataatta--atgtgtctgttttgtgtgttaatattaccaaattgtc 25017708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 527
Target Start/End: Complemental strand, 30348149 - 30348114
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||||| ||||||||||||||||||    
T  30348149 taatgtgtctattttgtgtgttaatattaccaaatt 30348114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 524
Target Start/End: Original strand, 7510563 - 7510670
Alignment:
Q  415 ttatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgtta 514  Q
    ||||||||| ||| ||||| |||||||||    |||  |||| ||||| || |||||||||||| |||||| |||||  |||||| | |||||| |||||    
T  7510563 ttatactccttccgtccctttatataagccccctttgtatttttcacattttttaagaaaagttattagtgtaatta--atgtgtatgttttgtgtgtta 7510660  T
Q  515 atattaccaa 524  Q
    ||||||||||    
T  7510661 atattaccaa 7510670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 530
Target Start/End: Original strand, 29874210 - 29874248
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  29874210 taatgtatctattttgtgtgttaatattaccaaattgtc 29874248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 34877666 - 34877733
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||||||||| ||||| |||| |||||  || ||||| |||||| ||||||||||||||||||    
T  34877666 tcacatttcttaagaaatgttgtcagtgtaatta--atttgtctgttttgtgtgttaatattaccaaatt 34877733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 529
Target Start/End: Original strand, 129642 - 129679
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  129642 taatgtgtctattttgtgtattaatattaccaaattgt 129679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 447 - 527
Target Start/End: Complemental strand, 14044613 - 14044535
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||| ||| ||||| ||||||||||||||||||| |||| |  |||| |||||||||| | | ||||||||| ||||||    
T  14044613 ttttacttttttcacatttcttaagaaaagttgttaatgcagt--taatatgtctattttatgtattaatattatcaaatt 14044535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 529
Target Start/End: Complemental strand, 24781340 - 24781303
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  24781340 taatgtgtttattttgtatgttaatattatcaaattgt 24781303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 527
Target Start/End: Complemental strand, 35569119 - 35569042
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||| ||||| ||||||||||||||| | |||| |||  |||||||||| |||| | | |||||||||| |||||    
T  35569119 tttacatttttcacatttcttaagaaaagttatcagtgtaat--taatgtgtctgttttatgtattaatattactaaatt 35569042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 483
Target Start/End: Complemental strand, 36750889 - 36750853
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttag 483  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  36750889 ttttacatttttcacaattcttaataaaagttgttag 36750853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 530
Target Start/End: Original strand, 41521197 - 41521258
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||| ||||||||| |||||  || |||||||||||| |||||||||||  ||||||||    
T  41521197 ttaagaaaaattgttagtgaaatta--atatgtctattttgtgtgttaatattattaaattgtc 41521258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 413 - 527
Target Start/End: Complemental strand, 20945452 - 20945340
Alignment:
Q  413 ttttatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgt 512  Q
    |||||||||||| || ||||||||| ||| ||  |||||||||| ||||| |||||||||||||||||||||| |||  ||||||||||||||| | |||    
T  20945452 ttttatactcccaccgtccctatatgtaaacaccttttacatttttcacatttcttaagaaaagttgttagtgtaat--taatgtgtctattttatgtgt 20945355  T
Q  513 taatattaccaaatt 527  Q
    |||||||||| ||||    
T  20945354 taatattacctaatt 20945340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 418 - 527
Target Start/End: Complemental strand, 41825283 - 41825177
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    ||||||| |||||||||||| ||||||  |||| ||||| ||||| ||||||||||||||||| |||| |||||  ||||||||||||| | ||||||||    
T  41825283 tactcccaccatccctatatttaagcaccttttgcattt-tcacacttcttaagaaaagttgtcagtgtaatta--atgtgtctattttatgtgttaata 41825187  T
Q  518 ttaccaaatt 527  Q
    ||||||||||    
T  41825186 ttaccaaatt 41825177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 415 - 529
Target Start/End: Original strand, 11388077 - 11388189
Alignment:
Q  415 ttatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgtta 514  Q
    ||||||||||| | ||||||||||||| |   |||| | ||| ||||| |||||||||||| ||||||||| |||||  ||||||||||||||  |||||    
T  11388077 ttatactcccttcgtccctatatataatcccattttgcttttttcacatttcttaagaaaaattgttagtgtaatta--atgtgtctattttgcgtgtta 11388174  T
Q  515 atattaccaaattgt 529  Q
    |||||||||||||||    
T  11388175 atattaccaaattgt 11388189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 429 - 529
Target Start/End: Complemental strand, 14646025 - 14645927
Alignment:
Q  429 tccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattg 528  Q
    ||||||||| ||||   ||||| | ||| ||||| || ||||||||||||||||||| |||||  ||||||||||||||| |||||||||||||||||||    
T  14646025 tccctatatctaagtcctttttgcttttttcacattttttaagaaaagttgttagtgtaatta--atgtgtctattttgtgtgttaatattaccaaattg 14645928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 466 - 530
Target Start/End: Complemental strand, 27047277 - 27047215
Alignment:
Q  466 cttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||| ||||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  27047277 cttaagaaaagctgttagtgcaatta--atgtgtctattttgtgtgttaatattaccaaattgtc 27047215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 48309450 - 48309510
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||    
T  48309450 ttcttaagaaaagttgttagtgcaattat---gtgtctattttgtatgttaatattacaaaatt 48309510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 467 - 529
Target Start/End: Complemental strand, 33412071 - 33412011
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||||||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  33412071 ttaagaaaaattgttagtgcaatta--atgtgtctattttgtgtgttaatattaccaaattgt 33412011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 46435837 - 46435767
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||||  |||||||| |||||| |||||||||||||||||||||    
T  46435837 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattaccaaattgtc 46435767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 530
Target Start/End: Complemental strand, 26517328 - 26517252
Alignment:
Q  452 catttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||| ||||||||||||||||| |||| |||||  |||||||| |||| | |||||||||||||||||||||    
T  26517328 catttttcacatttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttctgtgttaatattaccaaattgtc 26517252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 527
Target Start/End: Original strand, 29611794 - 29611900
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    ||||||| |||||||||||| ||||||  |||| ||||| || || || || ||||| |||||||||| |||||  ||||||||||||||| ||||||||    
T  29611794 tactcccaccatccctatatttaagcaccttttgcattt-tctcacttattgagaaatgttgttagtgtaatta--atgtgtctattttgtgtgttaata 29611890  T
Q  518 ttaccaaatt 527  Q
    ||| ||||||    
T  29611891 ttatcaaatt 29611900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 527
Target Start/End: Original strand, 42010825 - 42010934
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    |||||||||||| ||||| ||||||| |   ||||   ||| ||||| |||||||||||| |||||| || |||||  ||||||||||||||| ||||||    
T  42010825 tatactccctccgtccctgtatataatctccttttgtttttttcacatttcttaagaaaatttgttaatgtaatta--atgtgtctattttgtgtgttaa 42010922  T
Q  516 tattaccaaatt 527  Q
    ||||| ||||||    
T  42010923 tattatcaaatt 42010934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 530
Target Start/End: Complemental strand, 52325629 - 52325540
Alignment:
Q  439 taagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||| | ||| ||||| ||||| ||||||||||||  |||||||| |||||  ||||||||||||| | ||||||||||| |||||||||    
T  52325629 taagcactctttgcatttttcacatttcttaagaaaaaatgttagtgtaatta--atgtgtctattttatgtgttaatattatcaaattgtc 52325540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 12077844 - 12077780
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  12077844 ttcttaagaaaagttgtcagtgtaatta--atgtgtctcttttgtgtgttaatattacaaaattgtc 12077780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 527
Target Start/End: Complemental strand, 41740121 - 41740013
Alignment:
Q  418 tactccctccatccctatatataagcaa-tttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    |||||||||| | ||||||||||| |   ||||||| ||| ||||| || ||||||||| || ||| | ||||||  ||||||||||||||| |||||||    
T  41740121 tactccctccgttcctatatataaccccctttttacttttttcacattttttaagaaaaattattaatacaatta--atgtgtctattttgtgtgttaat 41740024  T
Q  517 attaccaaatt 527  Q
    |||||||||||    
T  41740023 attaccaaatt 41740013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 11344557 - 11344624
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||||||||||||| || ||| |||||  ||||||||||||||| |||||| |||||||||||    
T  11344557 tcacatttcttaagaaaagttattggtgtaatta--atgtgtctattttgtgtgttaacattaccaaatt 11344624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 530
Target Start/End: Complemental strand, 27638193 - 27638114
Alignment:
Q  449 ttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||| ||||| ||||||||||||||| |||||| |||||  |||| |||||||||| |||||||||||  ||||||||    
T  27638193 ttacctttttcacatttcttaagaaaagttattagtgtaatta--atgtctctattttgtgtgttaatattataaaattgtc 27638114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 530
Target Start/End: Original strand, 28477395 - 28477454
Alignment:
Q  469 aagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||  |||||||||  |||||||| |||||| |||||||||||||||||||||    
T  28477395 aagaaaagttgtcggtgcaatta--atgtgtctgttttgtgtgttaatattaccaaattgtc 28477454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 530
Target Start/End: Complemental strand, 31531561 - 31531462
Alignment:
Q  429 tccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattg 528  Q
    ||||||||| ||| |  ||||| | ||| ||||| ||||||||||||||||| |||| |||  |||||||||| |||||| |||| |||||| |||||||    
T  31531561 tccctatatgtaacccctttttgcttttttcacatttcttaagaaaagttgtcagtgtaat--taatgtgtctgttttgtgtgttgatattatcaaattg 31531464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 492 - 530
Target Start/End: Original strand, 35055817 - 35055855
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  35055817 taatgtgtctattttgtgtgttaatattaccaaattgtc 35055855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 530
Target Start/End: Original strand, 42891413 - 42891488
Alignment:
Q  453 atttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| |||||||||||||||||||||  |||  |||| ||||| |||||| |||||||||||||||| ||||    
T  42891413 atttttcacatttcttaagaaaagttgttagtataat--taatttgtctgttttgtgtgttaatattaccaaactgtc 42891488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 11393921 - 11393991
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || |||| |||||||||||||| |||||  ||||||||||||||| |||||||| || |||||||||    
T  11393921 tcacattttttaaaaaaagttgttagtgtaatta--atgtgtctattttgtgtgttaatactatcaaattgtc 11393991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 530
Target Start/End: Original strand, 26121319 - 26121401
Alignment:
Q  446 tttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||| | ||| ||||||||||||||||| |||| |||||  |||||| | |||||| ||||||||||| |||||||||    
T  26121319 tttttgcattttttacatttcttaagaaaagttgtcagtgtaatta--atgtgtttgttttgtgtgttaatattatcaaattgtc 26121401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 30476040 - 30476110
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || |||||||||||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  30476040 tcacattttttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgtc 30476110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 470 - 530
Target Start/End: Complemental strand, 39617345 - 39617287
Alignment:
Q  470 agaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||| |||| |||||  |||||||| ||||||||||||||||||| ||||||||    
T  39617345 agaaaagttgtcagtgtaatta--atgtgtctgttttgtatgttaatattacgaaattgtc 39617287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 40645673 - 40645743
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||| |||||  ||| |||||  |||||||| |||||| |||||||||||||||||||||    
T  40645673 tcacatttcttaagaaatgttgtctgtgtaatta--atgtgtctgttttgtgtgttaatattaccaaattgtc 40645743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 41727345 - 41727275
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||| ||||||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  41727345 tcacatttcttaaaaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacaaaattgtc 41727275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 46048521 - 46048591
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||  |||||||||| |||||| | |||||||||| ||||||||    
T  46048521 tcacatttcttaagaaaagttgtcagtgtaat--taatgtgtctgttttgtgtattaatattacgaaattgtc 46048591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 48901624 - 48901554
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || ||||||||| | |||||||||||||  || |||||||||||| |||||||||||| ||||||||    
T  48901624 tcacatttattaagaaaaatagttagtgcaatta--atttgtctattttgtgtgttaatattactaaattgtc 48901554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 48903190 - 48903120
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || ||||||||| | |||||||||||||  || |||||||||||| |||||||||||| ||||||||    
T  48903190 tcacatttattaagaaaaatagttagtgcaatta--atttgtctattttgtgtgttaatattactaaattgtc 48903120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 527
Target Start/End: Complemental strand, 13084459 - 13084398
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||||| |||  |||||  |||||||| |||||| ||||||||||||||||||    
T  13084459 ttcttaagaaaagttgtcagtataatta--atgtgtctgttttgtgtgttaatattaccaaatt 13084398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 22659585 - 22659646
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||||||||||||||||||  |||||  |||| | |||||||| ||||||||||||||||||    
T  22659585 ttcttaagaaaagttgttagtataatta--atgtatttattttgtgtgttaatattaccaaatt 22659646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 527
Target Start/End: Original strand, 21932957 - 21932992
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21932957 taatgtgtctattttgtgtgttaatattaccaaatt 21932992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 530
Target Start/End: Original strand, 26043008 - 26043088
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||| | ||| |||||||||||| |||| |||| |||||  || ||||| |||||| ||||||| |||||||||||||    
T  26043008 tttacattttttacatttcttaagaaaaattgtcagtgtaatta--atatgtctgttttgtgtgttaatgttaccaaattgtc 26043088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 29676840 - 29676776
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||||| |||| |||| |||||  ||||||||||||| | |||||||||||| ||||||||    
T  29676840 ttcttaagaaaaattgtcagtgtaatta--atgtgtctattttatgtgttaatattacgaaattgtc 29676776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 530
Target Start/End: Complemental strand, 31650778 - 31650702
Alignment:
Q  452 catttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||| || |||| |||| |||||| ||||||||  ||||||||||||| | || ||||||||||||||||||    
T  31650778 catttttcacatttattaaaaaaaattgttaatgcaatta--atgtgtctattttatgtggtaatattaccaaattgtc 31650702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 529
Target Start/End: Original strand, 25750532 - 25750595
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||||||||| ||||||| || |||||  || |||||||||||| ||||||||||||||| ||||    
T  25750532 ttcttaagaaaggttgttaatgtaatta--atttgtctattttgtgtgttaatattaccaacttgt 25750595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 26998894 - 26998964
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| | |  |||  |||||| |||||||||| |||||||||||| ||||||||    
T  26998894 tcacatttcttaagaaaagttgtcattataat--taatgtatctattttgtttgttaatattacgaaattgtc 26998964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 33287865 - 33287935
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||  ||||| |||||  || |||||||||||| |||||||||||  ||||||||    
T  33287865 tcacatttcttaagaaaagtttgtagtgtaatta--atttgtctattttgtgtgttaatattattaaattgtc 33287935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 527
Target Start/End: Original strand, 44083635 - 44083693
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||| |||||| || |||||  |||| |||||||||| ||||||||||||||||||    
T  44083635 ttaagaaaaattgttattgtaatta--atgtatctattttgtgtgttaatattaccaaatt 44083693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 6902716 - 6902640
Alignment:
Q  415 ttatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaatta 491  Q
    ||||||||| ||||||||||||||||| |   |||||| ||| ||| | ||||||| ||| ||||||||||| ||||    
T  6902716 ttatactccatccatccctatatataaacctcttttacctttttcatatttcttaaaaaatgttgttagtgctatta 6902640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 530
Target Start/End: Complemental strand, 54426029 - 54425993
Alignment:
Q  494 atgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||| |||||| |||||||||||||||||||||    
T  54426029 atgtgtctgttttgtgtgttaatattaccaaattgtc 54425993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 14577768 - 14577689
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||||||||||    
T  14577768 tttacatttttcacatttcttaagaaaagttgttagtgtaatta--atgtgtctattttgtttgttaatattaccaaattgt 14577689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 30262635 - 30262574
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  30262635 ttaaaaaaagttgttagtgcaatta--atgtgtctattttgtatgttaatattaccaaattgtc 30262574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 26878834 - 26878764
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||||| || |||||  ||||||||||||||| |||||||||||||||||||||    
T  26878834 tcacatttcttaagaaaagttgttaatgtaatta--atgtgtctattttgtgtgttaatattaccaaattgtc 26878764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 31746511 - 31746441
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| |||||||||||||||  ||||||||||||||| |||||||||||| ||||||||    
T  31746511 tcacatttcttaagaaaaattgttagtgcaatta--atgtgtctattttgtgtgttaatattacaaaattgtc 31746441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 418 - 530
Target Start/End: Original strand, 45203719 - 45203828
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||||||||| ||| ||||||   ||| ||||| | ||| |||||||||||  || ||||||||||||  ||||||||||||||||||||||||    
T  45203719 tactccctccatccctgtatgtaagcaccctttgcattttttacatttcttaagaaatttt-ttagtgcaatta--atgtgtctattttgtatgttaata 45203815  T
Q  518 ttaccaaattgtc 530  Q
    ||||||| |||||    
T  45203816 ttaccaacttgtc 45203828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 14522720 - 14522641
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||||||| ||||| |||||||||||| ||||||||| |||  |||||||| | |||||| ||||||||||||||||||||    
T  14522720 tttacatttttcacatttcttaagaaaaattgttagtgtaat--taatgtgtatgttttgtgtgttaatattaccaaattgt 14522641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 529
Target Start/End: Complemental strand, 16644184 - 16644073
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    |||||||| ||| ||||| ||| |||||| |  || ||||| ||||| |||||||||||||||||||||| |||  |||||||| |||||||| ||||||    
T  16644184 tatactccttccgtccctgtatgtaagcactcattgcatttttcacatttcttaagaaaagttgttagtgtaat--taatgtgtatattttgtgtgttaa 16644087  T
Q  516 tattaccaaattgt 529  Q
    ||| || |||||||    
T  16644086 tatcactaaattgt 16644073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 22590375 - 22590445
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| |||||||||||||||  ||||||||||||| | ||||||||| |||||||||||    
T  22590375 tcacatttcttaagaaaatttgttagtgcaatta--atgtgtctattttttgtgttaatatcaccaaattgtc 22590445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 530
Target Start/End: Original strand, 36437461 - 36437571
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||| ||||| |||||||||  | ||| | |||  |||| || |||||||||  ||||||||||||||  ||||||||||||||| |||||| |    
T  36437461 tactccctccgtccctctatataagctctctttgccttttccacattttttaagaaaaaatgttagtgcaatta--atgtgtctattttgtgtgttaaca 36437558  T
Q  518 ttaccaaattgtc 530  Q
    |||||||||||||    
T  36437559 ttaccaaattgtc 36437571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 530
Target Start/End: Complemental strand, 5191665 - 5191585
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| ||||| |||||||||||| ||||||| |||||||  |||||||| |||||| |||||||||||||||||||||    
T  5191665 ttttgcatttttcacatttcttaagaaaaattgttag-gcaatta--atgtgtctgttttgtgtgttaatattaccaaattgtc 5191585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 25888601 - 25888665
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||||||||||||||| |||||  || |||||||||||||||||||||||| || ||||||    
T  25888601 ttcttaagaaaagttgttagtgtaatta--atatgtctattttgtatgttaatattatcatattgtc 25888665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 527
Target Start/End: Original strand, 34882629 - 34882737
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||||||||| | ||||||||||| |   |||||  ||| ||||| || ||||||||| |||||| ||||||||  ||||||||||||||| |||||||    
T  34882629 atactccctccgttcctatatataatccccttttatttttttcacattttttaagaaaaattgttaatgcaatta--atgtgtctattttgtgtgttaat 34882726  T
Q  517 attaccaaatt 527  Q
    |||| ||||||    
T  34882727 attatcaaatt 34882737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 24962471 - 24962401
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||||||| | |||  ||||||||||||| | |||||||||||| ||||||||    
T  24962471 tcacatttcttaagaaaagttgttagtgtagtta--atgtgtctattttatgtgttaatattactaaattgtc 24962401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 25198289 - 25198359
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||||  |||||| | |||||| |||||||||||||||||||||    
T  25198289 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtttgttttgtgtgttaatattaccaaattgtc 25198359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 472 - 530
Target Start/End: Original strand, 12762856 - 12762912
Alignment:
Q  472 aaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||| ||||||||  ||||||||||||||| |||||||||||| ||||||||    
T  12762856 aaaagttgttaatgcaatta--atgtgtctattttgtgtgttaatattactaaattgtc 12762912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 530
Target Start/End: Complemental strand, 12998841 - 12998729
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    ||||||||||||||| |||||| |||||  | |||   ||| ||||| ||||||||||||||||| ||| ||||  |||||||  |||||||| ||| ||    
T  12998841 tatactccctccatctctatatttaagctttctttgtctttttcacatttcttaagaaaagttgtcagttcaat--taatgtgcatattttgtgtgtgaa 12998744  T
Q  516 tattaccaaattgtc 530  Q
    |||||| ||||||||    
T  12998743 tattactaaattgtc 12998729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 530
Target Start/End: Complemental strand, 24276702 - 24276593
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||||||||| ||||||||| ||| |  | ||| | ||| ||||| ||||||| |||||||||||||  |||||  ||||||||||| |||  ||||||    
T  24276702 atactccctccgtccctatatgtaaaccctctttgcctttttcacatttcttaaaaaaagttgttagtataatta--atgtgtctattgtgt--gttaat 24276607  T
Q  517 attaccaaattgtc 530  Q
    ||||||||||||||    
T  24276606 attaccaaattgtc 24276593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 43980689 - 43980622
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| |||||||||||||||||||||| | |||  ||||||||||||| | |||||||||||| |||||    
T  43980689 tcacatttcttaagaaaagttgttagtgtagtta--atgtgtctattttatgtgttaatattactaaatt 43980622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 2562836 - 2562766
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||  ||| |||| |||||  |||||||| ||||||||||||||||||| ||||||||    
T  2562836 tcacatttcttaagaaaaactgtcagtgtaatta--atgtgtctgttttgtatgttaatattacgaaattgtc 2562766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 25185030 - 25185100
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| || ||  |||||||| |||||| |||||||||||| ||||||||    
T  25185030 tcacatttcttaagaaaagttgtcagtgtaacta--atgtgtctgttttgtgtgttaatattacgaaattgtc 25185100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 447 - 527
Target Start/End: Original strand, 31673586 - 31673663
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||| ||| ||||| || ||||||||||||||  ||| |||||  |||||| |||||||||||||||||||||||||||    
T  31673586 ttttacttttttcacattttttaagaaaagttgtg-gtgtaatta--atgtgtttattttgtatgttaatattaccaaatt 31673663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 37956121 - 37956191
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||||  |||||||| |||||| |||||||||||| || |||||    
T  37956121 tcacatttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattacgaatttgtc 37956191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 529
Target Start/End: Complemental strand, 57294 - 57225
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||| |||||||||||||||||  ||| |||||  |||||||| |||||| |||||||||||| |||||||    
T  57294 tcacatttcttaagaaaagttgtcggtgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgt 57225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 530
Target Start/End: Complemental strand, 38770287 - 38770223
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||| ||||||| |||| |||||  |||||| |||||||| |||||||||||| ||||||||    
T  38770287 ttcttaagataagttgtcagtgtaatta--atgtgtttattttgtgtgttaatattacgaaattgtc 38770223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 530
Target Start/End: Complemental strand, 36309670 - 36309632
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  36309670 taatgtgtctattttgtgtgttaatattatcaaattgtc 36309632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 7172219 - 7172289
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| || || ||| |||||  ||||||||||||||| |||||||||||  ||||||||    
T  7172219 tcacatttcttaagaaaactttttggtgtaatta--atgtgtctattttgtgtgttaatattataaaattgtc 7172289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 527
Target Start/End: Original strand, 14739438 - 14739496
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||||||  ||| |||||  |||||| |||||| ||||||||||||||||||||    
T  14739438 ttaagaaaagttgtccgtgtaatta--atgtgtttattttatatgttaatattaccaaatt 14739496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 24512273 - 24512203
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || ||||||||| |||| |||| |||||  |||||||| |||||| ||||||||||| |||||||||    
T  24512273 tcacattttttaagaaaatttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattatcaaattgtc 24512203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 529
Target Start/End: Original strand, 27194062 - 27194099
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  27194062 taatgtgtttattttgtgtgttaatattaccaaattgt 27194099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 530
Target Start/End: Original strand, 40517773 - 40517810
Alignment:
Q  493 aatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  40517773 aatgtgtctgttttgtgtgttaatattaccaaattgtc 40517810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 527
Target Start/End: Complemental strand, 3006881 - 3006820
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||||||||||||||||||  |||  |||| |||||||||| | |||||||||||| |||||    
T  3006881 ttcttaagaaaagttgttagtataat--taatatgtctattttatgtgttaatattactaaatt 3006820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 530
Target Start/End: Complemental strand, 3113650 - 3113569
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||| ||||| ||||||| |||| || | |||| |||||  || ||||| |||||| ||||||||||| |||||||||    
T  3113650 ttttacatttttcacatttcttaaaaaaaattatcagtgtaatta--atatgtctgttttgtgtgttaatattatcaaattgtc 3113569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 530
Target Start/End: Original strand, 7772521 - 7772582
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||||||| | || |||||  |||||||| |||||| |||||||||||| ||||||||    
T  7772521 ttaagaaaagttgtcattgtaatta--atgtgtctgttttgtgtgttaatattacgaaattgtc 7772582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 41541550 - 41541619
Alignment:
Q  459 cacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| |||||||||||| | |||||| ||| ||  ||||||||||||||| ||| ||||||| |||||||||    
T  41541550 cacatttcttaagaaaaatagttagtacaacta--atgtgtctattttgtgtgtcaatattatcaaattgtc 41541619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 446 - 530
Target Start/End: Complemental strand, 12514703 - 12514621
Alignment:
Q  446 tttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||| |||||  | ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  12514703 tttttacatttttcacatattttaagaaaaattgttagtgcaatta--atgtgtctattttgtgtgttaatattaccaaattgtc 12514621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 448 - 530
Target Start/End: Complemental strand, 22410959 - 22410879
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||| ||||| |||||||||||||||||||||| |||||  |||||||| |||| |||||||||||||||||||||||    
T  22410959 tttacttttttcacatttcttaagaaaagttgttagtgtaatta--atgtgtctgttttttatgttaatattaccaaattgtc 22410879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 31946018 - 31945948
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| ||||||||| |||||  ||||||||||||||| |||||||||||||||||||||    
T  31946018 tcacatttcttaagaaaatttgttagtgtaatta--atgtgtctattttgtgtgttaatattaccaaattgtc 31945948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 416 - 530
Target Start/End: Complemental strand, 3888090 - 3887979
Alignment:
Q  416 tatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    |||||||||||| ||| | ||| ||||||  |||| || || ||||| ||||||||||||||||||| |||| |  ||||||||||||||||| ||||||    
T  3888090 tatactccctccgtccttgtatgtaagcaccttttgcaattttcacatttcttaagaaaagttgttattgcagt--taatgtgtctattttgtgtgttaa 3887993  T
Q  516 tattaccaaattgtc 530  Q
    ||||| |||||||||    
T  3887992 tatta-caaattgtc 3887979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 453 - 530
Target Start/End: Original strand, 15981789 - 15981864
Alignment:
Q  453 atttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| |||||||||||||||||| ||| |||||  |||||||| |||||| |||||||||||||||||||||    
T  15981789 atttttcacatttcttaagaaaagttgttggtgtaatta--atgtgtctgttttgtgtgttaatattaccaaattgtc 15981864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 464 - 529
Target Start/End: Original strand, 3729395 - 3729458
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    |||||||||||| ||||| ||| |||||  ||||||||||||||| ||||||||||||||||||||    
T  3729395 ttcttaagaaaaattgttggtgtaatta--atgtgtctattttgtgtgttaatattaccaaattgt 3729458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 472 - 529
Target Start/End: Complemental strand, 10669366 - 10669311
Alignment:
Q  472 aaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    |||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  10669366 aaaaattgttagtgcaatta--atgtgtctattttgtgtgttaatattaccaaattgt 10669311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 530
Target Start/End: Original strand, 19838890 - 19839001
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||||||||| ||||||||| ||| |    ||| | ||| ||||| |||||||||||||||||||||| | |||  ||||||||||||| | |||||||    
T  19838890 atactccctccgtccctatatgtaatccccctttgcttttttcacatttcttaagaaaagttgttagtgtagtta--atgtgtctattttatgtgttaat 19838987  T
Q  517 attaccaaattgtc 530  Q
    ||||| ||||||||    
T  19838988 attactaaattgtc 19839001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 473 - 527
Target Start/End: Complemental strand, 1514319 - 1514267
Alignment:
Q  473 aaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||||||||||||||||  || ||| |||||||||||||||||||||||||||    
T  1514319 aaagttgttagtgcaatta--atatgtttattttgtatgttaatattaccaaatt 1514267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 1763819 - 1763883
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||| |||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  1763819 ttcttaagaaaagttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattactaaattgtc 1763883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 5084647 - 5084573
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaatta--taatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||||||| |||||   ||||||| | |||||| ||||||||||| |||||||||    
T  5084647 tcacatttcttaagaaaagttgttagtgtaattaataaatgtgtttgttttgtgtgttaatattatcaaattgtc 5084573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 31780130 - 31780194
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||| |||||||| || ||||||||  |||||||||||||||||||| ||||||| ||||||||    
T  31780130 ttcttaataaaagttgataatgcaatta--atgtgtctattttgtatgttgatattactaaattgtc 31780194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 520
Target Start/End: Complemental strand, 8644913 - 8644842
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatatta 520  Q
    |||||||||| ||||| ||||||| ||||||||||||  ||||  |||| | ||||||||||||||||||||||    
T  8644913 ttttacatttttcacatttcttaaaaaaagttgttagcacaat--taatatatctattttgtatgttaatatta 8644842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 530
Target Start/End: Original strand, 16327118 - 16327193
Alignment:
Q  453 atttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| ||||||||||||||||| | |  |||  |||||||||| |||||| |||||||||||||||||||||    
T  16327118 atttttcacatttcttaagaaaagttgtcaatataat--taatgtgtctgttttgtgtgttaatattaccaaattgtc 16327193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 5895731 - 5895801
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||||| || |||  |||||||||| |||||| | |||||||||| ||||||||    
T  5895731 tcacatttcttaagaaaagttgttaatgtaat--taatgtgtctgttttgtgtattaatattacgaaattgtc 5895801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 11302855 - 11302925
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||||||  |||  |||||||||| |||| | |||||||||||| ||||||||    
T  11302855 tcacatttcttaagaaaagttgttagtataat--taatgtgtctgttttttgtgttaatattacaaaattgtc 11302925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 28238463 - 28238357
Alignment:
Q  415 ttatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgtta 514  Q
    |||||||||||||| | |||||| |||||  | ||| | | | ||||| ||||||| |||| ||||||||  |||||  ||||||||||||||| |||||    
T  28238463 ttatactccctccacctctatatgtaagctctctttgcttctttcacatttcttaataaaaattgttagtataatta--atgtgtctattttgtgtgtta 28238366  T
Q  515 atattacca 523  Q
    |||||||||    
T  28238365 atattacca 28238357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 527
Target Start/End: Complemental strand, 12514829 - 12514794
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||| ||||||||||||||||||||||||||    
T  12514829 taatgtgtccattttgtatgttaatattaccaaatt 12514794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 530
Target Start/End: Original strand, 16350516 - 16350591
Alignment:
Q  453 atttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| || |||| ||||||||| |||| |||||  ||| |||| |||||| |||||||||||||||||||||    
T  16350516 atttttcacattttttaataaaagttgtcagtgtaatta--atgagtctgttttgtgtgttaatattaccaaattgtc 16350591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 20522978 - 20523039
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||||||||| ||||||||||||||  ||||| || || ||||| ||| ||||||||||||||    
T  20522978 ttcttaagaaatgttgttagtgcaat--taatgagtttagtttgtgtgtcaatattaccaaatt 20523039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 458 - 528
Target Start/End: Original strand, 30248564 - 30248631
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattg 528  Q
    ||||| ||||||||||||||||| ||||   |  |||||||| | |||||| |||||||||||||||||||    
T  30248564 tcacatttcttaagaaaagttgtaagtg---tattaatgtgtttgttttgtgtgttaatattaccaaattg 30248631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 527
Target Start/End: Original strand, 31536018 - 31536079
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||||||||||||||||||| |||  |||| | |||||||| | ||||||||||| ||||||    
T  31536018 ttcttaagaaaagttgttagtgtaat--taatatatctattttatttgttaatattatcaaatt 31536079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 414 - 530
Target Start/End: Complemental strand, 8384120 - 8384007
Alignment:
Q  414 tttatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgtt 513  Q
    ||||||||| ||| |||||||||| |||||| || |||| ||| ||| | |||||||||||| | |||||||||||||  |||||| |||||||| ||||    
T  8384120 tttatactctctctatccctatatctaagcacttcttactttt-tcatatttcttaagaaaaatagttagtgcaatta--atgtgtttattttgtgtgtt 8384024  T
Q  514 aatattaccaaattgtc 530  Q
    |||||||||||||||||    
T  8384023 aatattaccaaattgtc 8384007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 452 - 530
Target Start/End: Original strand, 44424589 - 44424665
Alignment:
Q  452 catttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||| |||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||| ||||||||    
T  44424589 catttttcacatttcttaagaaaagttgttagtgtaatta--atgtgtctgttttgtatgttaatattacgaaattgtc 44424665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 447 - 527
Target Start/End: Original strand, 2131746 - 2131824
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||||||||| | ||| ||||||||||||||||||||||||||  |||  |||||||||||| ||||||||||||||||||    
T  2131746 ttttacattttttacatttcttaagaaaagttgttagtgcaat--taacatgtctattttgtgtgttaatattaccaaatt 2131824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 447 - 527
Target Start/End: Original strand, 21012842 - 21012920
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    |||| ||||| ||| | ||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||| ||||||    
T  21012842 ttttgcatttttcaaatttcttaagaaaagttgttagtgcaat--taatgtgtttattttgtgtgttaatattatcaaatt 21012920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 530
Target Start/End: Complemental strand, 28265096 - 28264986
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||| ||||| ||||||||   ||||| | ||| ||||| ||||||||||||||||| |||| |||  |||||||| | ||||||  |||||||    
T  28265096 tactccctccctccctgtatataagtcttttttgcttttttcacatttcttaagaaaagttgtcagtgtaat--taatgtgtttgttttgtgcgttaata 28264999  T
Q  518 ttaccaaattgtc 530  Q
    |||||||||||||    
T  28264998 ttaccaaattgtc 28264986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 4398620 - 4398559
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||||| |||||  ||||||||||||||| |||||||||||| ||||||||    
T  4398620 ttaagaaaagttgttagtgtaatta--atgtgtctattttgtgtgttaatattacgaaattgtc 4398559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 530
Target Start/End: Original strand, 14420683 - 14420747
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||||||||||||||| |||||  |||||||| |||||| |||||||||||||||||||||    
T  14420683 ttctaaagaaaagttgttagtgtaatta--atgtgtctgttttgtgtgttaatattaccaaattgtc 14420747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 530
Target Start/End: Original strand, 43709878 - 43709989
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaag-aaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    |||||||| ||||||| ||| ||||||   ||| ||||| ||||| |||||||| |||| |||||||||||||||  ||| ||||||||||| |||||||    
T  43709878 tactcccttcatccctgtatgtaagcaccctttgcatttttcacatttcttaagcaaaaattgttagtgcaatta--atgcgtctattttgtgtgttaat 43709975  T
Q  517 attaccaaattgtc 530  Q
    |||||  |||||||    
T  43709976 attacttaattgtc 43709989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 466 - 530
Target Start/End: Original strand, 11071676 - 11071738
Alignment:
Q  466 cttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||||||||||||||||||  ||||||||||| ||| | |||||||||||| ||||||||    
T  11071676 cttaagaaaagttgttagtgcaat--taatgtgtctaatttatgtgttaatattactaaattgtc 11071738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 17663624 - 17663694
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||||||| |||  ||||||| ||||||| | |||||||||||| ||||||||    
T  17663624 tcacatttcttaagaaaagttgttagtgtaat--taatgtgcctattttatgtgttaatattactaaattgtc 17663694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 37355036 - 37355106
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||| ||| |||||  |||||||| |||||| |||||||||||| ||||||||    
T  37355036 tcacatttcttaagaaaagttgtttgtgtaatta--atgtgtctcttttgtgtgttaatattacaaaattgtc 37355106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 452 - 527
Target Start/End: Complemental strand, 9718283 - 9718210
Alignment:
Q  452 catttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||| ||||||||||| ||||| |||| |||||  |||||||| |||||| ||||||||||||||||||    
T  9718283 catttttcacatttcttaagaaatgttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattaccaaatt 9718210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 527
Target Start/End: Original strand, 41865675 - 41865783
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    ||||||||||| |||||  || |||||   |||| | ||| ||||| |||||||||||||||||| ||  |||||  ||||||||||||||| ||||||     
T  41865675 atactccctccttcccttaatgtaagccccttttgcttttttcacatttcttaagaaaagttgttggtctaatta--atgtgtctattttgtgtgttaac 41865772  T
Q  517 attaccaaatt 527  Q
    |||||||||||    
T  41865773 attaccaaatt 41865783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 528
Target Start/End: Original strand, 45214685 - 45214793
Alignment:
Q  418 tactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaata 517  Q
    |||||||||| |||| |||| |||||    ||| ||||| ||||| ||||||||||||||||| |||| |||  |||||||||| |||||| ||||||||    
T  45214685 tactccctccgtcccgatatgtaagccccctttgcatttttcacatttcttaagaaaagttgtcagtgtaat--taatgtgtctgttttgtgtgttaata 45214782  T
Q  518 ttaccaaattg 528  Q
    ||  |||||||    
T  45214783 ttttcaaattg 45214793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 472 - 525
Target Start/End: Complemental strand, 34042147 - 34042096
Alignment:
Q  472 aaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaa 525  Q
    |||| |||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  34042147 aaaaattgttagttcaatta--atgtgtctattttgtatgttaatattaccaaa 34042096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 3645323 - 3645393
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||||||  | |  ||||||||||||||||| | |||||||||| ||||||||    
T  3645323 tcacatttcttaagaaaagttgttagtttact--taatgtgtctattttgtgtattaatattactaaattgtc 3645393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 17251066 - 17250996
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || ||||||||||||||||||  |||||  |||||||| |||||| |||||||||||| ||||||||    
T  17251066 tcacattttttaagaaaagttgttagtataatta--atgtgtctgttttgtgtgttaatattacaaaattgtc 17250996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 20361983 - 20362053
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||| ||||||||| | |||  ||||||||||||| | |||||||||||| ||||||||    
T  20361983 tcacatttcttaagaaaaattgttagtgtagtta--atgtgtctattttatgtgttaatattactaaattgtc 20362053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 24774865 - 24774935
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || ||||||||| || |||||| |||||  |||| |||||||||| |||||||||||||||||||||    
T  24774865 tcacattttttaagaaaatttattagtgtaatta--atgtatctattttgtgtgttaatattaccaaattgtc 24774935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 40346186 - 40346116
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| || ||||||||||||||| |||||||||  ||||||  ||||||| |||||||||||| ||||||||    
T  40346186 tcacattttttaagaaaagttgtttgtgcaatta--atgtgttcattttgtgtgttaatattactaaattgtc 40346116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 530
Target Start/End: Complemental strand, 45150841 - 45150771
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||||||||||||||| |||||||  ||||||||  ||||||| ||||||||||||  |||||||    
T  45150841 tcacatttcttaagaaaagttgtttgtgcaat--taatgtgttcattttgtgtgttaatattactcaattgtc 45150771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 515
Target Start/End: Complemental strand, 6275714 - 6275617
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaag-ttgttagtgcaattataatgtgtctattttgtatgttaa 515  Q
    ||||||||||| | | | ||| |||||| ||||||||||| || || ||||||| ||||  |||||||||||||||  ||||||||||||||| ||||||    
T  6275714 atactccctccgttcttctatgtaagcattttttacatttttcccatttcttaaaaaaaaattgttagtgcaatta--atgtgtctattttgtgtgttaa 6275617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 520
Target Start/End: Original strand, 247660 - 247720
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatatta 520  Q
    ||||| || ||||| ||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  247660 tcacattttttaaggaaagttgttagtgtaatta--atgtgtctattttgtgtgttaatatta 247720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 530
Target Start/End: Original strand, 44421439 - 44421519
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||| ||||| |||||||||||| |||| |||| |||||  |||| ||| |||||| |||||||||||| ||||||||    
T  44421439 tttacttttttcacatttcttaagaaaaattgtcagtgtaatta--atgtatctgttttgtttgttaatattactaaattgtc 44421519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 459 - 512
Target Start/End: Complemental strand, 2917201 - 2917150
Alignment:
Q  459 cacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgt 512  Q
    |||| |||||||||||||||||||||  |||  |||||||||||||||||||||    
T  2917201 cacatttcttaagaaaagttgttagtataat--taatgtgtctattttgtatgt 2917150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 530
Target Start/End: Original strand, 3337681 - 3337756
Alignment:
Q  453 atttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| ||||||||||||| ||||  |||||| |  |||||| ||||||| |||||||||||| |||||||||    
T  3337681 atttttcacatttcttaagaaaagatgttgctgcaatca--atgtgtatattttgcatgttaatattagcaaattgtc 3337756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 8065177 - 8065110
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||| ||||||| ||||| |||| |||||  |||||||| |||||| ||||||||||||||||||    
T  8065177 tcacatttcctaagaaatgttgtcagtgtaatta--atgtgtctgttttgtgtgttaatattaccaaatt 8065110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 27297577 - 27297644
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||||||||||  |||||||| |||||  |||||||| |||||| |||||||||||| |||||    
T  27297577 tcacatttcttaagaaaaactgttagtgtaatta--atgtgtctgttttgtgtgttaatattacaaaatt 27297644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 529
Target Start/End: Original strand, 43650040 - 43650103
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||| |||||| |||| |||| |||||  |||||||| ||||||||||||||||||| |||||||    
T  43650040 ttctttagaaaaattgtcagtgtaatta--atgtgtctgttttgtatgttaatattactaaattgt 43650103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 11459153 - 11459223
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| |||||| ||||||||||  ||| ||  ||||||||||| |||||| |||||||||||| ||||||||    
T  11459153 tcacatttcttatgaaaagttgtcggtgtaa--ataatgtgtctgttttgtgtgttaatattactaaattgtc 11459223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 15851531 - 15851601
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||||||||| |||| |||  |||||||||| |||| | |||||||||||  ||||||||    
T  15851531 tcacatttcttaagaaaagttgtgagtgtaat--taatgtgtctgttttttgtgttaatattatgaaattgtc 15851601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 528
Target Start/End: Original strand, 27749502 - 27749580
Alignment:
Q  448 tttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattg 528  Q
    ||||| ||| ||||| ||||||||||||||||| |||| |||  |||| ||||| |||||| | |||||||||| ||||||    
T  27749502 tttacttttttcacatttcttaagaaaagttgtcagtgtaat--taatatgtctgttttgtgtattaatattactaaattg 27749580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 529
Target Start/End: Complemental strand, 35453806 - 35453769
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  35453806 taatgtgtctattttatatgttaatattactaaattgt 35453769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 530
Target Start/End: Original strand, 41665710 - 41665780
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||| ||||||||||| ||||| |||| |||  |||||||||| |||||| |||||||| || |||||||||    
T  41665710 tcacatttcttaagaaatgttgtcagtgtaat--taatgtgtctgttttgtgtgttaatagtatcaaattgtc 41665780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 507
Target Start/End: Original strand, 2395808 - 2395849
Alignment:
Q  464 ttcttaagaaaagttgttagtgcaattataatgtgtctattttg 507  Q
    |||||||||||||||||||||| |||  ||||||||||||||||    
T  2395808 ttcttaagaaaagttgttagtgtaat--taatgtgtctattttg 2395849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 447 - 530
Target Start/End: Complemental strand, 13477149 - 13477068
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||| ||||| ||||| || ||||||||| |||||||||||||  |||| ||| |||||| | |||||||||||| | ||||||    
T  13477149 ttttgcatttttcacattttttaagaaaaattgttagtgcaat--taatatgtttattttatgtgttaatattactagattgtc 13477068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 447 - 530
Target Start/End: Original strand, 214607 - 214688
Alignment:
Q  447 ttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||| ||| ||||| |||||||||||||||||||||| |||  ||||||||||| ||| | |||||||||||||||||||||    
T  214607 ttttacttttttcacatttcttaagaaaagttgttagtgtaat--taatgtgtctagtttttgtgttaatattaccaaattgtc 214688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 2018 - 1951
Alignment:
Q  458 tcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaatt 527  Q
    ||||| ||||||||| |||||||||||| |||||  ||||||||||||||| ||||||||||||||||||    
T  2018 tcacatttcttaagataagttgttagtgtaatta--atgtgtctattttgtgtgttaatattaccaaatt 1951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 530
Target Start/End: Complemental strand, 99913 - 99852
Alignment:
Q  467 ttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    |||||||||||||||||||||| |   ||||||||||||||| |||||||||||| ||||||||    
T  99913 ttaagaaaagttgttagtgcaactt--atgtgtctattttgtgtgttaatattacgaaattgtc 99852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 530
Target Start/End: Original strand, 18693 - 18759
Alignment:
Q  462 aattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaatattaccaaattgtc 530  Q
    ||||||||| ||||||||||| ||||||||  || ||| ||||||||  ||||||||||||||||||||    
T  18693 aattcttaaaaaaagttgttaatgcaatta--atttgtttattttgtgggttaatattaccaaattgtc 18759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 415 - 523
Target Start/End: Complemental strand, 38625 - 38519
Alignment:
Q  415 ttatactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgtta 514  Q
    |||||||||||||| | |||||| |||||  | ||| | | | ||||| ||||||| |||| ||||||||  |||||  ||||||||||||||| |||||    
T  38625 ttatactccctccacctctatatgtaagctctctttgcttctttcacatttcttaataaaaattgttagtataatta--atgtgtctattttgtgtgtta 38528  T
Q  515 atattacca 523  Q
    |||||||||    
T  38527 atattacca 38519  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 530
Target Start/End: Original strand, 49095 - 49206
Alignment:
Q  417 atactccctccatccctatatataagcaatttttacatttgtcacaattcttaagaaaagttgttagtgcaattataatgtgtctattttgtatgttaat 516  Q
    |||||| |||| ||| ||||| ||| || ||||| ||||| | ||| |||||||||||| |||||| || |||  |||| |||||| ||||| |||||||    
T  49095 atactctctccgtccttatatttaaacactttttgcattttttacatttcttaagaaaaattgttaatgtaat--taatatgtctactttgtgtgttaat 49192  T
Q  517 attaccaaattgtc 530  Q
    ||||  ||||||||    
T  49193 attattaaattgtc 49206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 529
Target Start/End: Complemental strand, 23723 - 23686
Alignment:
Q  492 taatgtgtctattttgtatgttaatattaccaaattgt 529  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  23723 taatgtgtttattttgtatgttaatattatcaaattgt 23686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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