View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5590-Insertion-7 (Length: 976)

Name: NF5590-Insertion-7
Description: NF5590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5590-Insertion-7
NF5590-Insertion-7
[»] chr3 (72 HSPs)
chr3 (7-408)||(1901176-1901571)
chr3 (7-408)||(1910622-1911017)
chr3 (605-975)||(1901961-1902331)
chr3 (605-975)||(1911407-1911777)
chr3 (38-408)||(1894363-1894734)
chr3 (38-408)||(1903809-1904180)
chr3 (654-911)||(35864077-35864334)
chr3 (173-408)||(2934082-2934316)
chr3 (404-560)||(1901740-1901896)
chr3 (404-560)||(1911186-1911342)
chr3 (705-970)||(21984209-21984474)
chr3 (738-888)||(11027175-11027325)
chr3 (696-897)||(7729708-7729908)
chr3 (478-560)||(7867597-7867679)
chr3 (478-560)||(25959430-25959512)
chr3 (478-560)||(31326809-31326891)
chr3 (478-560)||(32795937-32796019)
chr3 (726-863)||(31339880-31340017)
chr3 (480-560)||(462291-462371)
chr3 (480-560)||(981571-981651)
chr3 (770-941)||(54393254-54393428)
chr3 (667-870)||(10480436-10480639)
chr3 (478-560)||(50294012-50294094)
chr3 (478-560)||(32981009-32981091)
chr3 (478-560)||(34607807-34607889)
chr3 (482-560)||(41717364-41717442)
chr3 (478-560)||(44593067-44593149)
chr3 (478-559)||(1295434-1295515)
chr3 (779-921)||(52259689-52259831)
chr3 (483-560)||(29800442-29800519)
chr3 (652-749)||(44441778-44441875)
chr3 (478-560)||(46473229-46473311)
chr3 (479-560)||(43409254-43409335)
chr3 (508-560)||(32656076-32656128)
chr3 (478-560)||(11173551-11173633)
chr3 (410-468)||(31339734-31339792)
chr3 (879-976)||(44441602-44441699)
chr3 (764-882)||(49600729-49600847)
chr3 (779-882)||(34962274-34962377)
chr3 (485-560)||(7231901-7231976)
chr3 (478-560)||(27198041-27198124)
chr3 (478-560)||(49457666-49457749)
chr3 (485-559)||(28300541-28300615)
chr3 (479-560)||(47276386-47276468)
chr3 (479-560)||(1031316-1031397)
chr3 (605-641)||(7867746-7867782)
chr3 (605-641)||(14957836-14957872)
chr3 (605-641)||(18169157-18169193)
chr3 (605-641)||(20380924-20380960)
chr3 (605-641)||(38944176-38944212)
chr3 (605-641)||(48945847-48945883)
chr3 (605-641)||(51464307-51464343)
chr3 (485-560)||(20380784-20380859)
chr3 (485-560)||(29706004-29706079)
chr3 (478-560)||(35987342-35987425)
chr3 (478-555)||(47773866-47773942)
chr3 (485-559)||(55344190-55344265)
chr3 (485-555)||(22153970-22154040)
chr3 (611-641)||(29800590-29800620)
chr3 (501-555)||(31176349-31176403)
chr3 (607-641)||(35272027-35272061)
chr3 (608-641)||(108431-108464)
chr3 (608-641)||(5398918-5398951)
chr3 (608-641)||(12792638-12792671)
chr3 (482-527)||(16267799-16267844)
chr3 (514-559)||(18181543-18181588)
chr3 (608-641)||(20215948-20215981)
chr3 (483-559)||(29525333-29525410)
chr3 (605-638)||(31997816-31997849)
chr3 (608-641)||(34607958-34607991)
chr3 (605-638)||(34733326-34733359)
chr3 (608-641)||(45205288-45205321)
[»] chr6 (25 HSPs)
chr6 (666-938)||(6822518-6822790)
chr6 (652-795)||(11769760-11769903)
chr6 (479-560)||(8173201-8173282)
chr6 (698-882)||(18250755-18250939)
chr6 (478-559)||(32729991-32730072)
chr6 (478-560)||(21443789-21443871)
chr6 (478-560)||(16533147-16533230)
chr6 (820-919)||(33106823-33106920)
chr6 (652-768)||(33106707-33106823)
chr6 (605-641)||(12441538-12441574)
chr6 (479-523)||(25567382-25567426)
chr6 (479-560)||(12044431-12044513)
chr6 (479-559)||(11742872-11742953)
chr6 (605-641)||(27334858-27334894)
chr6 (605-641)||(27395598-27395634)
chr6 (605-641)||(32457287-32457323)
chr6 (478-560)||(608548-608631)
chr6 (485-560)||(1897787-1897862)
chr6 (605-640)||(6435037-6435072)
chr6 (478-560)||(20712167-20712250)
chr6 (478-559)||(23653780-23653862)
chr6 (479-560)||(25561831-25561910)
chr6 (479-560)||(26101345-26101424)
chr6 (605-638)||(28549045-28549078)
chr6 (608-641)||(30796113-30796146)
[»] chr2 (46 HSPs)
chr2 (657-941)||(28528939-28529223)
chr2 (654-897)||(44718840-44719081)
chr2 (481-560)||(19668078-19668157)
chr2 (721-853)||(42530893-42531033)
chr2 (478-560)||(40951291-40951373)
chr2 (481-560)||(5167633-5167712)
chr2 (482-560)||(30856908-30856986)
chr2 (479-560)||(4842408-4842489)
chr2 (488-560)||(13553244-13553316)
chr2 (478-558)||(15283137-15283217)
chr2 (650-749)||(42071527-42071626)
chr2 (486-558)||(10288255-10288327)
chr2 (478-559)||(21805674-21805755)
chr2 (478-558)||(36763407-36763488)
chr2 (488-560)||(35792354-35792426)
chr2 (825-897)||(42071417-42071489)
chr2 (479-560)||(37631255-37631337)
chr2 (478-559)||(43791678-43791760)
chr2 (483-520)||(13553310-13553347)
chr2 (478-523)||(19637365-19637410)
chr2 (478-523)||(19835958-19836003)
chr2 (606-641)||(21490703-21490738)
chr2 (605-641)||(4738607-4738643)
chr2 (605-641)||(5067681-5067717)
chr2 (478-557)||(8352939-8353019)
chr2 (605-641)||(14140372-14140408)
chr2 (605-641)||(30856807-30856843)
chr2 (605-641)||(31629604-31629640)
chr2 (605-641)||(33296106-33296142)
chr2 (605-641)||(36435681-36435717)
chr2 (478-560)||(1574554-1574637)
chr2 (485-560)||(3091842-3091917)
chr2 (485-560)||(11164271-11164346)
chr2 (485-560)||(13711162-13711237)
chr2 (485-560)||(42251815-42251890)
chr2 (606-641)||(42283275-42283310)
chr2 (479-560)||(305857-305939)
chr2 (803-924)||(21490265-21490384)
chr2 (485-559)||(42665707-42665781)
chr2 (478-559)||(44059610-44059692)
chr2 (608-641)||(5167780-5167813)
chr2 (608-641)||(6365186-6365219)
chr2 (608-641)||(15283288-15283321)
chr2 (608-641)||(36132974-36133007)
chr2 (608-641)||(41040266-41040299)
chr2 (411-468)||(44719099-44719156)
[»] chr5 (51 HSPs)
chr5 (652-976)||(15810667-15810991)
chr5 (652-976)||(15726823-15727146)
chr5 (705-970)||(29368448-29368713)
chr5 (666-868)||(4930660-4930861)
chr5 (479-560)||(9636047-9636128)
chr5 (478-560)||(91316-91398)
chr5 (478-554)||(24792559-24792635)
chr5 (478-560)||(36581355-36581437)
chr5 (478-560)||(15639486-15639568)
chr5 (479-560)||(13734249-13734330)
chr5 (824-976)||(22399404-22399555)
chr5 (478-560)||(28904093-28904179)
chr5 (478-560)||(28940488-28940574)
chr5 (479-558)||(582758-582837)
chr5 (479-558)||(7144678-7144757)
chr5 (479-559)||(19437359-19437439)
chr5 (478-560)||(6865675-6865757)
chr5 (483-560)||(36624419-36624496)
chr5 (483-560)||(39595375-39595452)
chr5 (478-560)||(5698216-5698298)
chr5 (478-560)||(26626707-26626789)
chr5 (483-559)||(23991333-23991410)
chr5 (479-560)||(26627431-26627512)
chr5 (478-523)||(38387848-38387893)
chr5 (605-641)||(125092-125128)
chr5 (478-514)||(20040921-20040957)
chr5 (485-559)||(125194-125268)
chr5 (479-560)||(11880875-11880957)
chr5 (483-560)||(12612909-12612987)
chr5 (478-524)||(32732004-32732050)
chr5 (740-782)||(38351726-38351768)
chr5 (721-782)||(17228914-17228975)
chr5 (605-641)||(1774318-1774354)
chr5 (605-641)||(6865811-6865847)
chr5 (605-641)||(19127124-19127160)
chr5 (605-641)||(23991169-23991205)
chr5 (605-641)||(28811429-28811465)
chr5 (605-637)||(29227721-29227753)
chr5 (605-641)||(34381012-34381048)
chr5 (605-641)||(36713213-36713249)
chr5 (605-641)||(39595272-39595308)
chr5 (409-468)||(4930877-4930936)
chr5 (606-641)||(14508193-14508228)
chr5 (485-560)||(33567134-33567209)
chr5 (478-560)||(41460217-41460300)
chr5 (479-560)||(3960057-3960139)
chr5 (605-639)||(12910786-12910820)
chr5 (828-878)||(17229004-17229054)
chr5 (483-560)||(3722969-3723046)
chr5 (605-638)||(4098626-4098659)
chr5 (605-638)||(33567247-33567280)
[»] chr8 (42 HSPs)
chr8 (721-929)||(40381594-40381802)
chr8 (735-965)||(42163974-42164204)
chr8 (652-853)||(14539388-14539589)
chr8 (693-974)||(3310494-3310775)
chr8 (479-560)||(1796584-1796665)
chr8 (726-941)||(37728356-37728571)
chr8 (478-560)||(6005045-6005127)
chr8 (482-559)||(5782890-5782967)
chr8 (479-560)||(36740413-36740494)
chr8 (479-559)||(32725671-32725751)
chr8 (478-560)||(12045541-12045623)
chr8 (478-560)||(42443207-42443289)
chr8 (478-559)||(44380502-44380583)
chr8 (810-882)||(2537200-2537272)
chr8 (886-976)||(1336111-1336201)
chr8 (666-749)||(1336280-1336363)
chr8 (764-919)||(12585655-12585810)
chr8 (478-523)||(69514-69559)
chr8 (478-560)||(38174136-38174219)
chr8 (485-559)||(21273605-21273679)
chr8 (478-559)||(43605556-43605638)
chr8 (608-641)||(6004944-6004977)
chr8 (483-559)||(20994950-20995027)
chr8 (605-641)||(1796496-1796532)
chr8 (605-641)||(5502371-5502407)
chr8 (480-560)||(9046254-9046334)
chr8 (605-641)||(12732842-12732878)
chr8 (815-938)||(16340198-16340319)
chr8 (605-641)||(22852874-22852910)
chr8 (605-641)||(28927681-28927717)
chr8 (605-641)||(36497661-36497697)
chr8 (605-641)||(45101396-45101432)
chr8 (485-560)||(37524323-37524398)
chr8 (485-560)||(40413258-40413333)
chr8 (483-560)||(9895107-9895185)
chr8 (478-558)||(6849148-6849229)
chr8 (483-560)||(7678833-7678910)
chr8 (605-638)||(11138910-11138943)
chr8 (605-638)||(27836183-27836216)
chr8 (518-559)||(39359838-39359879)
chr8 (608-641)||(42047335-42047368)
chr8 (608-641)||(43419879-43419912)
[»] chr1 (75 HSPs)
chr1 (703-933)||(30294091-30294321)
chr1 (666-976)||(27850396-27850707)
chr1 (656-865)||(21487306-21487509)
chr1 (478-560)||(48872480-48872562)
chr1 (478-560)||(27352731-27352813)
chr1 (480-560)||(51339590-51339670)
chr1 (479-560)||(4604630-4604711)
chr1 (487-560)||(30530471-30530544)
chr1 (478-560)||(25061834-25061916)
chr1 (478-560)||(36930644-36930726)
chr1 (478-560)||(49621462-49621544)
chr1 (478-560)||(50527945-50528027)
chr1 (479-560)||(43611971-43612052)
chr1 (482-560)||(25098683-25098758)
chr1 (478-558)||(44730747-44730827)
chr1 (478-560)||(16658540-16658626)
chr1 (803-910)||(37244915-37245022)
chr1 (478-560)||(30687153-30687235)
chr1 (482-560)||(32821736-32821814)
chr1 (478-560)||(40595942-40596024)
chr1 (478-560)||(51172195-51172277)
chr1 (652-749)||(46396444-46396541)
chr1 (768-839)||(5200333-5200404)
chr1 (652-755)||(42773370-42773473)
chr1 (879-976)||(46396620-46396717)
chr1 (478-560)||(21255672-21255755)
chr1 (479-560)||(16987548-16987630)
chr1 (876-976)||(1282177-1282277)
chr1 (876-976)||(1283208-1283308)
chr1 (478-554)||(40605308-40605385)
chr1 (478-560)||(11460895-11460977)
chr1 (666-755)||(37245038-37245128)
chr1 (479-560)||(43640875-43640957)
chr1 (479-560)||(47059778-47059860)
chr1 (483-523)||(5043186-5043226)
chr1 (822-882)||(29095842-29095902)
chr1 (478-560)||(42299075-42299158)
chr1 (607-641)||(10384211-10384245)
chr1 (815-852)||(42772340-42772377)
chr1 (605-641)||(5309075-5309111)
chr1 (605-641)||(6829818-6829854)
chr1 (605-641)||(7503470-7503506)
chr1 (605-641)||(8391362-8391398)
chr1 (605-641)||(18610773-18610809)
chr1 (605-641)||(29293959-29293995)
chr1 (483-554)||(29294055-29294124)
chr1 (605-641)||(32821635-32821671)
chr1 (605-641)||(37843467-37843503)
chr1 (482-558)||(45349989-45350065)
chr1 (605-641)||(45740579-45740615)
chr1 (605-641)||(49425738-49425774)
chr1 (605-641)||(49453491-49453527)
chr1 (605-641)||(50226914-50226950)
chr1 (482-514)||(51571665-51571697)
chr1 (478-560)||(23554852-23554935)
chr1 (478-560)||(25239124-25239207)
chr1 (478-560)||(31244622-31244705)
chr1 (485-560)||(34187365-34187440)
chr1 (763-830)||(42772392-42772459)
chr1 (478-560)||(48325323-48325406)
chr1 (478-560)||(366758-366840)
chr1 (607-641)||(25302680-25302714)
chr1 (479-560)||(32966368-32966450)
chr1 (478-560)||(38019391-38019472)
chr1 (482-520)||(44959074-44959112)
chr1 (770-843)||(1282281-1282354)
chr1 (652-749)||(1282356-1282452)
chr1 (770-843)||(1283312-1283385)
chr1 (652-749)||(1283387-1283483)
chr1 (478-559)||(4511665-4511746)
chr1 (605-638)||(5477187-5477220)
chr1 (607-640)||(9882696-9882729)
chr1 (478-558)||(29253953-29254034)
chr1 (608-641)||(31427995-31428028)
chr1 (488-560)||(50659090-50659162)
[»] chr7 (40 HSPs)
chr7 (652-969)||(23756472-23756791)
chr7 (479-560)||(18157074-18157155)
chr7 (481-560)||(43107713-43107792)
chr7 (478-560)||(2469793-2469875)
chr7 (478-559)||(25940555-25940636)
chr7 (478-560)||(9031308-9031390)
chr7 (479-560)||(27688738-27688819)
chr7 (479-560)||(30941278-30941359)
chr7 (491-560)||(43444729-43444798)
chr7 (478-560)||(43079517-43079602)
chr7 (478-560)||(6655505-6655587)
chr7 (478-560)||(35098475-35098557)
chr7 (478-555)||(35072133-35072210)
chr7 (764-919)||(22972847-22973002)
chr7 (765-882)||(33758395-33758512)
chr7 (485-559)||(12141986-12142060)
chr7 (506-560)||(29034186-29034240)
chr7 (478-559)||(40693415-40693497)
chr7 (480-560)||(21588816-21588897)
chr7 (478-560)||(8792488-8792567)
chr7 (478-560)||(4678164-4678247)
chr7 (478-560)||(37392144-37392227)
chr7 (478-560)||(38023314-38023396)
chr7 (605-641)||(2469703-2469739)
chr7 (605-641)||(22330655-22330691)
chr7 (609-641)||(27778079-27778111)
chr7 (605-641)||(37352014-37352050)
chr7 (605-641)||(41077535-41077571)
chr7 (605-641)||(45607024-45607060)
chr7 (485-560)||(5978680-5978755)
chr7 (606-641)||(37832450-37832485)
chr7 (482-560)||(40077356-40077435)
chr7 (478-512)||(8061634-8061668)
chr7 (478-559)||(10591035-10591117)
chr7 (605-639)||(28596908-28596942)
chr7 (605-639)||(32154571-32154605)
chr7 (663-717)||(46232378-46232432)
chr7 (605-638)||(23680062-23680095)
chr7 (608-641)||(31982057-31982090)
chr7 (608-641)||(41966332-41966365)
[»] chr4 (64 HSPs)
chr4 (478-560)||(46567030-46567112)
chr4 (652-871)||(13035532-13035747)
chr4 (666-941)||(22087635-22087913)
chr4 (478-560)||(12638925-12639007)
chr4 (479-560)||(28676043-28676124)
chr4 (770-975)||(47551993-47552200)
chr4 (478-560)||(55510960-55511042)
chr4 (479-559)||(33438147-33438227)
chr4 (779-882)||(46732653-46732755)
chr4 (479-560)||(40847470-40847549)
chr4 (483-555)||(16508870-16508942)
chr4 (478-533)||(11997778-11997833)
chr4 (775-921)||(27907223-27907367)
chr4 (479-560)||(23836989-23837070)
chr4 (879-974)||(26333241-26333336)
chr4 (731-795)||(35747008-35747072)
chr4 (478-560)||(18874811-18874894)
chr4 (478-560)||(54801097-54801180)
chr4 (482-560)||(26440764-26440842)
chr4 (479-560)||(32621728-32621799)
chr4 (478-560)||(37977216-37977298)
chr4 (655-749)||(47551897-47551991)
chr4 (605-641)||(51039151-51039187)
chr4 (485-560)||(5234366-5234441)
chr4 (764-976)||(13028607-13028815)
chr4 (485-560)||(31275247-31275322)
chr4 (479-514)||(41010060-41010095)
chr4 (485-559)||(22071600-22071674)
chr4 (486-560)||(31658020-31658094)
chr4 (480-514)||(48783941-48783975)
chr4 (478-560)||(51389417-51389499)
chr4 (479-524)||(7795137-7795182)
chr4 (605-641)||(4896535-4896571)
chr4 (605-641)||(6370980-6371016)
chr4 (605-641)||(11064124-11064160)
chr4 (605-641)||(11997685-11997721)
chr4 (605-641)||(15596396-15596432)
chr4 (605-641)||(22257231-22257267)
chr4 (479-511)||(23094525-23094557)
chr4 (520-560)||(24209717-24209757)
chr4 (605-641)||(26885291-26885327)
chr4 (605-641)||(33093139-33093175)
chr4 (605-641)||(34116575-34116611)
chr4 (605-641)||(35017153-35017189)
chr4 (605-641)||(37547065-37547101)
chr4 (605-641)||(41119505-41119541)
chr4 (605-641)||(46173550-46173586)
chr4 (605-641)||(47014939-47014975)
chr4 (485-560)||(4896395-4896470)
chr4 (798-881)||(24368009-24368092)
chr4 (478-556)||(34259931-34260010)
chr4 (478-560)||(42510812-42510895)
chr4 (478-559)||(3475970-3476052)
chr4 (652-750)||(13028978-13029076)
chr4 (480-514)||(24209689-24209723)
chr4 (485-559)||(42915114-42915188)
chr4 (608-641)||(940297-940330)
chr4 (483-559)||(2613509-2613586)
chr4 (518-559)||(8456005-8456046)
chr4 (608-641)||(12638825-12638858)
chr4 (608-641)||(26440676-26440709)
chr4 (480-560)||(33860435-33860516)
chr4 (483-559)||(41609564-41609641)
chr4 (605-638)||(48326555-48326588)
[»] scaffold0166 (1 HSPs)
scaffold0166 (478-554)||(34942-35018)
[»] scaffold0002 (2 HSPs)
scaffold0002 (478-560)||(440819-440901)
scaffold0002 (605-641)||(440718-440754)
[»] scaffold0184 (1 HSPs)
scaffold0184 (479-560)||(16483-16564)
[»] scaffold0078 (1 HSPs)
scaffold0078 (479-560)||(56280-56361)
[»] scaffold0245 (3 HSPs)
scaffold0245 (876-976)||(7857-7957)
scaffold0245 (770-843)||(7961-8034)
scaffold0245 (652-749)||(8036-8132)
[»] scaffold0229 (3 HSPs)
scaffold0229 (876-976)||(8185-8285)
scaffold0229 (770-843)||(8289-8362)
scaffold0229 (652-749)||(8364-8460)
[»] scaffold0115 (1 HSPs)
scaffold0115 (485-560)||(15084-15158)
[»] scaffold0003 (1 HSPs)
scaffold0003 (478-560)||(337219-337301)
[»] scaffold0662 (1 HSPs)
scaffold0662 (605-641)||(1078-1114)
[»] scaffold0508 (1 HSPs)
scaffold0508 (605-641)||(11571-11607)
[»] scaffold0318 (1 HSPs)
scaffold0318 (479-558)||(18179-18258)
[»] scaffold0154 (1 HSPs)
scaffold0154 (605-641)||(19726-19762)
[»] scaffold0026 (1 HSPs)
scaffold0026 (605-641)||(113625-113661)
[»] scaffold0011 (1 HSPs)
scaffold0011 (605-641)||(219699-219735)
[»] scaffold0131 (1 HSPs)
scaffold0131 (605-640)||(15569-15604)
[»] scaffold0036 (1 HSPs)
scaffold0036 (485-560)||(18105-18179)
[»] scaffold0086 (1 HSPs)
scaffold0086 (479-560)||(17218-17300)
[»] scaffold0018 (1 HSPs)
scaffold0018 (611-641)||(36002-36032)


Alignment Details
Target: chr3 (Bit Score: 342; Significance: 0; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 7 - 408
Target Start/End: Original strand, 1901176 - 1901571
Alignment:
Q  7 agttttgctagaataactgttacaaaacccaaaaagaaaacaaacaatggaaacagttactagtatgtcataccttgagcagttggtcagcatggcaagg 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1901176 agttttgctaaaataactgttacaaaacccaaaaagaaaacaaacaatggaaacagttactagtacgtcataccttgagcagttggtcagcatggcaagg 1901275  T
Q  107 taactgatcaataatgtgtcattgtattcctgcaaggaaaagaagatactgtaagctaagaaaaactatacgagcatttatgctatatcttactgtgatg 206  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  1901276 taactgatcaataaggtgtcattgtattcctgcaaggaaaagaagatattgtaagctaaaaaaaattatacgagcatttatgctatatcttactgtgatg 1901375  T
Q  207 ttaatcccataatccagctcagataccatagtgaaacaacatgaatcttcacagaaaaaacattatcatgatagcaataatccaacgtttcatgtgggaa 306  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1901376 ttaatcccataatccagatcagataccatagtgaaacaacatgaatcttcacagaaaaaacattatcatgatagcaataatccaacgtttcatgtgggaa 1901475  T
Q  307 tagtccttatatttgtactggtgttagagaccacccaaggtaagaaaatcagagagtattattattaattactggaaaaaggaactaatacagaaacata 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||   | |||||||||||||||||||||    
T  1901476 tagtccttatatttgtactggtgttagagaccacccaaggtaagaaaatcagagagtattatta---attactg---ataggaactaatacagaaacata 1901569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 7 - 408
Target Start/End: Original strand, 1910622 - 1911017
Alignment:
Q  7 agttttgctagaataactgttacaaaacccaaaaagaaaacaaacaatggaaacagttactagtatgtcataccttgagcagttggtcagcatggcaagg 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1910622 agttttgctaaaataactgttacaaaacccaaaaagaaaacaaacaatggaaacagttactagtacgtcataccttgagcagttggtcagcatggcaagg 1910721  T
Q  107 taactgatcaataatgtgtcattgtattcctgcaaggaaaagaagatactgtaagctaagaaaaactatacgagcatttatgctatatcttactgtgatg 206  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  1910722 taactgatcaataaggtgtcattgtattcctgcaaggaaaagaagatattgtaagctaaaaaaaattatacgagcatttatgctatatcttactgtgatg 1910821  T
Q  207 ttaatcccataatccagctcagataccatagtgaaacaacatgaatcttcacagaaaaaacattatcatgatagcaataatccaacgtttcatgtgggaa 306  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1910822 ttaatcccataatccagatcagataccatagtgaaacaacatgaatcttcacagaaaaaacattatcatgatagcaataatccaacgtttcatgtgggaa 1910921  T
Q  307 tagtccttatatttgtactggtgttagagaccacccaaggtaagaaaatcagagagtattattattaattactggaaaaaggaactaatacagaaacata 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||   | |||||||||||||||||||||    
T  1910922 tagtccttatatttgtactggtgttagagaccacccaaggtaagaaaatcagagagtattatta---attactg---ataggaactaatacagaaacata 1911015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 605 - 975
Target Start/End: Original strand, 1901961 - 1902331
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctcnnnnnnnnaatagtataatgcactaatagttgatattttgatcacatggcccccacttatcat 704  Q
    ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1901961 aagttgtcacaaagtggttgtacaaatatcatttctcttttttttaatagtataatgcactaatagttgatattttgatcacatggcccccacttatcat 1902060  T
Q  705 aaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 804  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1902061 aaatcatttctcttttggtctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 1902160  T
Q  805 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaa 904  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1902161 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaa 1902260  T
Q  905 tcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatcc 975  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  1902261 tcataaaggacaattattattgctataaatttttatatatggtgca-cccactattcaaaaatcctggatcc 1902331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 605 - 975
Target Start/End: Original strand, 1911407 - 1911777
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctcnnnnnnnnaatagtataatgcactaatagttgatattttgatcacatggcccccacttatcat 704  Q
    ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1911407 aagttgtcacaaagtggttgtacaaatatcatttctcttttttttaatagtataatgcactaatagttgatattttgatcacatggcccccacttatcat 1911506  T
Q  705 aaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 804  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1911507 aaatcatttctcttttggtctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 1911606  T
Q  805 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaa 904  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1911607 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaa 1911706  T
Q  905 tcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatcc 975  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||    
T  1911707 tcataaaggacaattattattgctataaatttttatatatggtgca-cccactattcaaaaatcctggatcc 1911777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 38 - 408
Target Start/End: Original strand, 1894363 - 1894734
Alignment:
Q  38 aaaagaaaacaaacaatggaaacagttactagtatgtcataccttgagcagttggtcagcatggcaaggtaactgatcaataatgtgtcattgtattcct 137  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1894363 aaaagaaaacaaacaaaggaaacagttactagtatgtcataccttgagcagttggtcagcatggcaaggtaactgatcaataaggtgtcattgtattcct 1894462  T
Q  138 gcaaggaaaagaagatactgtaagctaagaaaaactatacgagcatttatgctatatcttactgtgatgttaatcccataatccagctcagataccatag 237  Q
    |||||| |||||||||| |||||||||| ||||| ||||||||| |||||||||||| |||||||||| |||| |||| |||||||| ||||||||||||    
T  1894463 gcaagggaaagaagatattgtaagctaaaaaaaattatacgagcctttatgctatattttactgtgatattaagcccacaatccagcacagataccatag 1894562  T
Q  238 tgaaacaacatgaatcttcacagaaaaaacattatcatgatagcaataa--tccaacgtttcat-gtgggaatagtccttatatttgtactggtgt--ta 332  Q
    |||| |||||||||||||||||| |||||||||||| | ||||||||||  ||||||||||||| |||||||||||||||||||||||| ||||||  ||    
T  1894563 tgaagcaacatgaatcttcacag-aaaaacattatcgtaatagcaataatctccaacgtttcatagtgggaatagtccttatatttgtagtggtgttata 1894661  T
Q  333 gagaccacccaaggtaagaaaatcagagagtattattattaattactggaaaaaggaactaatacagaaacatatc 408  Q
    |||||||| |||| ||||||||||||||||   ||||||||||||||| ||| |||||||||||||||||||||||    
T  1894662 gagaccactcaagctaagaaaatcagagag---tattattaattactgaaaataggaactaatacagaaacatatc 1894734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 38 - 408
Target Start/End: Original strand, 1903809 - 1904180
Alignment:
Q  38 aaaagaaaacaaacaatggaaacagttactagtatgtcataccttgagcagttggtcagcatggcaaggtaactgatcaataatgtgtcattgtattcct 137  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1903809 aaaagaaaacaaacaaaggaaacagttactagtatgtcataccttgagcagttggtcagcatggcaaggtaactgatcaataaggtgtcattgtattcct 1903908  T
Q  138 gcaaggaaaagaagatactgtaagctaagaaaaactatacgagcatttatgctatatcttactgtgatgttaatcccataatccagctcagataccatag 237  Q
    |||||| |||||||||| |||||||||| ||||| ||||||||| |||||||||||| |||||||||| |||| |||| |||||||| ||||||||||||    
T  1903909 gcaagggaaagaagatattgtaagctaaaaaaaattatacgagcctttatgctatattttactgtgatattaagcccacaatccagcacagataccatag 1904008  T
Q  238 tgaaacaacatgaatcttcacagaaaaaacattatcatgatagcaataa--tccaacgtttcat-gtgggaatagtccttatatttgtactggtgt--ta 332  Q
    |||| |||||||||||||||||| |||||||||||| | ||||||||||  ||||||||||||| |||||||||||||||||||||||| ||||||  ||    
T  1904009 tgaagcaacatgaatcttcacag-aaaaacattatcgtaatagcaataatctccaacgtttcatagtgggaatagtccttatatttgtagtggtgttata 1904107  T
Q  333 gagaccacccaaggtaagaaaatcagagagtattattattaattactggaaaaaggaactaatacagaaacatatc 408  Q
    |||||||| |||| ||||||||||||||||   ||||||||||||||| ||| |||||||||||||||||||||||    
T  1904108 gagaccactcaagctaagaaaatcagagag---tattattaattactgaaaataggaactaatacagaaacatatc 1904180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 654 - 911
Target Start/End: Original strand, 35864077 - 35864334
Alignment:
Q  654 gtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattct 753  Q
    |||||||| |||||||||||||||||| | ||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35864077 gtataatgtactaatagttgatatttttaccacattgccctcacttatcacaaatcatttctcttttggcctacacatatcatcatatatctcaaattct 35864176  T
Q  754 ttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagata-ttt 852  Q
    ||||| | ||||||||| ||||||||| | | |||||||||  ||||| ||||||| |||||||| ||||||||||| |||||||||||||||||| ||     
T  35864177 ttcttgataatatgaattttatcaagatttgaatgcgaaattgaatgagagatgatcggttaaatgattgtttagttgtttatatagagaaagatacttc 35864276  T
Q  853 tcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaa 911  Q
    || ||| |||||||||| |  ||||||||  |||||||||||||| |||||||||||||    
T  35864277 tccttg-tattgaaaataaaaaaatcattgaaagtttccataatatgaaaaatcataaa 35864334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 173 - 408
Target Start/End: Complemental strand, 2934316 - 2934082
Alignment:
Q  173 tatacgagcatttatgctatatcttactgtgatgttaatcccataatccagctcagataccatagtgaaacaacatgaatcttcacagaaaaaacattat 272  Q
    |||| |||| |||||||||||| |||||||||| |||| |||| |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  2934316 tatatgagcctttatgctatattttactgtgatattaagcccacaatccagcacagataccatagtgaagcaacatgaatcttcacaga-aaaacattat 2934218  T
Q  273 catgatagcaataa--tccaacgtttcat-gtgggaatagtccttatatttgtactggtgt--tagagaccacccaaggtaagaaaatcagagagtatta 367  Q
    | | ||||||||||  |||||| |||||| |||||||||||||||||||||||| ||||||  |||||||||| |||| ||||||||||||||     ||    
T  2934217 cgtaatagcaataatctccaacatttcatagtgggaatagtccttatatttgtattggtgttatagagaccactcaagctaagaaaatcagag-----ta 2934123  T
Q  368 ttattaattactggaaaaaggaactaatacagaaacatatc 408  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  2934122 ttattaattactgaaaataggaactaatacagaaacatatc 2934082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 404 - 560
Target Start/End: Original strand, 1901740 - 1901896
Alignment:
Q  404 atatccagggacggatgtatgttggtgaatgtgtgagcttgtgcctacacaaacattttagaaacnnnnnnnnnagagcaatgatatttgaacaaccatt 503  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||         |||||||| |||||||||||||||||    
T  1901740 atatccagggaccgatgtatgtcggtgaatgtgtgagcttgtgcctacacaaacattttagaaactttttttttagagcaataatatttgaacaaccatt 1901839  T
Q  504 tggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1901840 tggtacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaatg 1901896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 404 - 560
Target Start/End: Original strand, 1911186 - 1911342
Alignment:
Q  404 atatccagggacggatgtatgttggtgaatgtgtgagcttgtgcctacacaaacattttagaaacnnnnnnnnnagagcaatgatatttgaacaaccatt 503  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||         |||||||| |||||||||||||||||    
T  1911186 atatccagggaccgatgtatgtcggtgaatgtgtgagcttgtgcctacacaaacattttagaaactttttttttagagcaataatatttgaacaaccatt 1911285  T
Q  504 tggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1911286 tggtacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaatg 1911342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 705 - 970
Target Start/End: Original strand, 21984209 - 21984474
Alignment:
Q  705 aaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 804  Q
    ||||||||||||| | |||  ||| |||||||||||||||||||||||||| || | |||||||||||||||||||| ||||| |  |||| ||||  ||    
T  21984209 aaatcatttctctcttggctcacatatatcatcatatatctcaaattctttattgataatatgaatattatcaagaaccggatacataatcgaatgtgag 21984308  T
Q  805 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaa 904  Q
    ||||| |||||||| ||||||   ||||||||||| ||||| ||| ||| |||||||||||||||||| ||| ||||| ||||||| |||||| ||||||    
T  21984309 atgatcggttaaatgattgttcgattatttatataaagaaatatacttttattgatattgaaaatgagaaaaccattcaaagtttcaataatatgaaaaa 21984408  T
Q  905 tcataaaggacaattattattgctataaatttttataaatg-tgcaccccactattcaaaaatcctg 970  Q
    |  || ||||||||||||| ||||| ||||||||||| ||| ||| ||||| || ||||||||||||    
T  21984409 ttctagaggacaattattaatgctacaaatttttatatatgatgc-ccccaataatcaaaaatcctg 21984474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 738 - 888
Target Start/End: Original strand, 11027175 - 11027325
Alignment:
Q  738 atatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttata 837  Q
    ||||||||||| || |||||| | ||||||||||||||||||||||| ||| |||||| ||||| |||||| || |||||| ||| ||||||||||||||    
T  11027175 atatatctcaacttttttcttcataatatgaatattatcaagaatcgaatgtgaaatcgaatgagagatgactgcttaaataattatttagttatttata 11027274  T
Q  838 tagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtt 888  Q
    ||| | |||||||||| |||||||||||||||||  ||||||||| |||||    
T  11027275 tagtgtaagatatttttattgatattgaaaatgataaaatcattcaaagtt 11027325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 696 - 897
Target Start/End: Original strand, 7729708 - 7729908
Alignment:
Q  696 acttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatc 795  Q
    |||||||| |||| |||||||| | || | |||| |||||||||||| ||||| |  |||||| | ||||||||||||||||||||| | |||| |||||    
T  7729708 acttatcacaaattatttctctcttgggccacacctatcatcatatagctcaattcatttcttgataatatgaatattatcaagaatagaatgcaaaatc 7729807  T
Q  796 aaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataa 895  Q
     | ||  ||||     ||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| || |||||||||    
T  7729808 gagtgggagatatcaagttaaatgattgtttaattatttatatagagaaatatatttttattgatattgaaaatgag-aaatcattcaaaatttccataa 7729906  T
Q  896 ta 897  Q
    ||    
T  7729907 ta 7729908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 7867597 - 7867679
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  7867597 agagcaatgatatttgaacaaccatttggtacaatctatttgacaaccttcattttctctcttttcattggtaaaaaacaatg 7867679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 25959430 - 25959512
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  25959430 agagcaatgatatttgaacaaccatttgatacaacctatttgacaactttcattttctctcttttcattggtcaaaaacaatg 25959512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 31326891 - 31326809
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  31326891 agagcaatgatatttgaacaaccatttggtacaatctatttgacaatcttcattttctctcttttcattggtcaaaaacaatg 31326809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 32796019 - 32795937
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||||||    
T  32796019 agagcaatgatatttgaacaaccatttggtacaacctatttgacaactttcattttctctctttttattggtcaaaaacaatg 32795937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 726 - 863
Target Start/End: Original strand, 31339880 - 31340017
Alignment:
Q  726 acacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtt 825  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||  |||||||||    ||| | |||||  ||||||| ||||||    
T  31339880 acacatatcatcatatatctcaaattctttctcgataatatgaatattatcaataatcaaatgcgaaattgtgtgagaaatgatcagttaaatgattgtt 31339979  T
Q  826 tagttatttatatagagaaagatattttcattgatatt 863  Q
    |||||| |||||| |||||||||||||| |||||||||    
T  31339980 tagttaattatattgagaaagatatttttattgatatt 31340017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 462291 - 462371
Alignment:
Q  480 agcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | ||||||||||    
T  462291 agcaatgatatttgaacaaccatttggtacaacctatttgacaacctttcttttctctcttttcattgataaaaaacaatg 462371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 480 - 560
Target Start/End: Complemental strand, 981651 - 981571
Alignment:
Q  480 agcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  981651 agcaatgatatttgaacaaccatttagtacagcctatttgacaaccttcattttctctcttttcattggtcaaaaataatg 981571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 770 - 941
Target Start/End: Original strand, 54393254 - 54393428
Alignment:
Q  770 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaaga---tattttcattgatattgaa 866  Q
    |||||| |||| | |||| ||||||||| |   ||||||  |||||||| |||||||||||||||||||||| |||     | |||| ||||||||||||    
T  54393254 tattattaagatttggatacgaaatcaagtcggagatgaccggttaaataattgtttagttatttatatagataaaatgtttttttttattgatattgaa 54393353  T
Q  867 aatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttata 941  Q
    |||||| ||||||||| |||||||||||||| ||| |||| || ||||||||| ||| ||||| |||||||||||    
T  54393354 aatgagaaaatcattcaaagtttccataatatgaataatcgtagaggacaatttttaatgctacaaatttttata 54393428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 667 - 870
Target Start/End: Complemental strand, 10480639 - 10480436
Alignment:
Q  667 atagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatat 766  Q
    |||||||| ||||||| ||||||  || ||||||||| | ||||||| ||| | ||| ||||  ||| ||||||||| |||||| ||||||| | |||||    
T  10480639 atagttgacattttgaccacatgatccacacttatcacatatcatttttctcttggcgtacatctatgatcatatatttcaaatcctttcttgataatat 10480540  T
Q  767 gaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaa 866  Q
    | |||||||||||||||  |||  ||||| | ||| | ||||  | |||||| |||||||||||||||||||||||||| |  |||| |||||||| |||    
T  10480539 gcatattatcaagaatcaaatgtcaaatcgactgagaaatgaccgtttaaatgattgtttagttatttatatagagaaaaaggttttaattgatatcgaa 10480440  T
Q  867 aatg 870  Q
    ||||    
T  10480439 aatg 10480436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 50294012 - 50294094
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||| |||||||||| ||||||||||||    
T  50294012 agagcaatgatattttaacaaccatttggtacaacttatttgacaactttctttttctctcttttcattgatcaaaaacaatg 50294094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 32981009 - 32981091
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||| | ||||||||| ||||| |||||||||||||    
T  32981009 agagcaatgatatttgaacaaccatttggtacaaattttttgacaaccttcttcttctcccttctcatttgtcaaaaacaatg 32981091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 34607807 - 34607889
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||| | ||||||||||    
T  34607807 agagcaacgatatttgaacaactatttggtacaatctatttgacaaccttcattttctctcttttcattgataaaaaacaatg 34607889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 41717442 - 41717364
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||| ||||||||||||| || ||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  41717442 caatgatatttgatcaaccatttggtataatctatttgacaatcttctttttctctcttttcattggtcaaaaacaatg 41717364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 44593149 - 44593067
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||| || ||||||||||||| | ||||||||||||| |||||||  ||||||||||||||||||||||    
T  44593149 agagcaatgatatttgaataatcatttggtacaacttttttgacaaccttcattttctctattttcattggtcaaaaacaatg 44593067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 478 - 559
Target Start/End: Complemental strand, 1295515 - 1295434
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||||||||||||||||||||| ||||||   ||||||||||||| ||||||  ||||||||||||||||||||||    
T  1295515 agagcaatgatatttgaacaaccatttgctacaacaattttgacaaccttctttttctatcttttcattggtcaaaaacaat 1295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 779 - 921
Target Start/End: Original strand, 52259689 - 52259831
Alignment:
Q  779 gaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatc 878  Q
    ||||||||||||||||| ||||  |||||| ||||||||| ||||||| ||| ||||||| |||  || |||||| ||||||||||| |||||| |||||    
T  52259689 gaatcggatgcgaaatcgaatgggagatgactggttaaatgattgtttggttgtttatatggagggaggtatttttattgatattgagaatgagaaaatc 52259788  T
Q  879 attctaagtttccataataggaaaaatcataaaggacaattat 921  Q
    |||| | ||||| | ||||  ||| ||| || |||||||||||    
T  52259789 attcaatgtttctagaatataaaacatcgtagaggacaattat 52259831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 483 - 560
Target Start/End: Original strand, 29800442 - 29800519
Alignment:
Q  483 aatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||  |||||||||||||||||||| || |||| ||||||| |||||||||||||||||| ||||    
T  29800442 aatgatatttgaacaattatttggtacaacctatttgaaaatcttctttttctctcttttcattggtcaaaaataatg 29800519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 652 - 749
Target Start/End: Complemental strand, 44441875 - 44441778
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 749  Q
    |||||||||| |  ||||||||| |||||||||||||||  | ||||||||| ||||||||||||| | |||  |||| |||||||||||||||||||    
T  44441875 tagtataatgtatcaatagttgacattttgatcacatggatcacacttatcacaaatcatttctctcttggcgcacacttatcatcatatatctcaaa 44441778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 46473311 - 46473229
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||| ||||||||||||||||||||||| |||||| | | ||||||| |   ||||||| |||||||||||||||||||||||    
T  46473311 agagtaatgatatttgaacaaccatttgatacaacttttatgacaacttcttttttctctcttttcattggtcaaaaacaatg 46473229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 43409254 - 43409335
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||| ||||||||||||||  |||| ||| || ||||||||||| |||  ||||||| |||||||||||||||||||||||    
T  43409254 gagcattgatatttgaacaattatttagtataatctatttgacaatcttttttttctctcttttcattggtcaaaaacaatg 43409335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 508 - 560
Target Start/End: Complemental strand, 32656128 - 32656076
Alignment:
Q  508 acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  32656128 acaacctatttgacgaccttccttttctttcttttcattggtcaaaaacaatg 32656076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 11173633 - 11173551
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||| ||| ||||||||||||||||||| |||||| | | ||||||| |   ||||||| |||||||||||||||||||||||    
T  11173633 agagtaataatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatg 11173551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 410 - 468
Target Start/End: Original strand, 31339734 - 31339792
Alignment:
Q  410 agggacggatgtatgttggtgaatgtgtgagcttgtgcctacacaaacattttagaaac 468  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||||  ||||||||||    
T  31339734 agggacggatgtatgttggttcatgtgtgggcttgtgcctacacaaaatttttagaaac 31339792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 879 - 976
Target Start/End: Complemental strand, 44441699 - 44441602
Alignment:
Q  879 attctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatccg 976  Q
    |||| ||||||| |||||| ||| |||| || ||||||||||||| | ||| ||||||||||| || |||| | |||||||||||||||||||||||||    
T  44441699 attcaaagtttcaataatatgaataatcgtagaggacaattattaatactacaaatttttatatatagtgc-ctccactattcaaaaatcctggatccg 44441602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 764 - 882
Target Start/End: Complemental strand, 49600847 - 49600729
Alignment:
Q  764 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatatt 863  Q
    |||||| |||||||||| || | ||||||||| ||||   ||| | |||||| || ||||| |||||| ||||||||| | ||| ||||| ||||| |||    
T  49600847 tatgaagattatcaagactcagttgcgaaatcgaatgggtgattaatggttagatgattgtctagttacttatatagaaagagagatttttattgagatt 49600748  T
Q  864 gaaaatgagcaaatcattc 882  Q
    ||||||||| |||||||||    
T  49600747 gaaaatgagaaaatcattc 49600729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 779 - 882
Target Start/End: Complemental strand, 34962377 - 34962274
Alignment:
Q  779 gaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagata-ttttcattgatattgaaaatgagcaaat 877  Q
    ||||| |||| |||||| |||| || |||| || |||||| ||||||||||||||||||||||   ||||| |||| |||||||||||||| ||| ||||    
T  34962377 gaatcagatgtgaaatcgaatggaaaatgactg-ttaaatgattgtttagttatttatatagaatgagatactttttattgatattgaaaacgagaaaat 34962279  T
Q  878 cattc 882  Q
    |||||    
T  34962278 cattc 34962274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 7231901 - 7231976
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||| | | ||||||  |   ||||||| |||||||||||||||||||||||    
T  7231901 tgatatttgaacaaccatttgatacaacttttgtgacaatttattttttctctcttttcattggtcaaaaacaatg 7231976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 27198041 - 27198124
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||| | ||||| | | |||||||||   ||||||| |||||||||||| ||||||||||    
T  27198041 agagcaatgatatttgaacaatcatttgctaacaacttttatgacaacctcatttttctctcttttcattggttaaaaacaatg 27198124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 49457749 - 49457666
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtac-aacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||| ||  ||| | | |||||||||   ||||||| |||||||||||||||||||||||    
T  49457749 agagcaatgatatttgaacaaacatttgctaataacttctatgacaacctcatttttctctcttttcattggtcaaaaacaatg 49457666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 485 - 559
Target Start/End: Original strand, 28300541 - 28300615
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||||||||||| || ||||||   | ||||||| ||  ||||||| ||||||||||||||||||||||    
T  28300541 tgatatttgaacaaccatatgatacaactcttgtgacaacttttattttctctcttttcattggtcaaaaacaat 28300615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 47276468 - 47276386
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||| ||| || || |||| | | ||||||||| | ||||||| ||| |||||||||||||||||||    
T  47276468 gagcaatgatatttgaacaatcatgtgctaacaacttctatgacaacctcctttttctctcttctcattggtcaaaaacaatg 47276386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 1031316 - 1031397
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||  |||||||||||| | | ||||||| ||  ||||||  ||| | |||||||||||||||||    
T  1031316 gagcaatgatatttgaacaattatttggtacaacttttatgacaactttatttttctttcttcttattggtcaaaaacaatg 1031397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 7867746 - 7867782
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7867746 aagttgtcacaaaatagttgtacaaatatcatttctc 7867782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 14957872 - 14957836
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14957872 aagttgtcacaaagtggttgtacaaatatcatttctc 14957836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 18169193 - 18169157
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  18169193 aagttgtcacaaagtggttgtacaaatatcatttctc 18169157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 20380924 - 20380960
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20380924 aagttgtcacaaagtggttgtacaaatatcatttctc 20380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 38944176 - 38944212
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38944176 aagttgtcacaaattagttgtacaaatatcatttctc 38944212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 48945883 - 48945847
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  48945883 aagttgtcacaaagtggttgtacaaatatcatttctc 48945847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 51464307 - 51464343
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  51464307 aagttgtcacaaagtggttgtacaaatatcatttctc 51464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 20380784 - 20380859
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||   ||||| | | ||||||| |   ||||||| |||||||||||||||||||||||    
T  20380784 tgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcacttttcattggtcaaaaacaatg 20380859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 29706079 - 29706004
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| ||||| |||||| | | ||||||| |   ||||||| |||||||||||| ||||||||||    
T  29706079 tgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggtaaaaaacaatg 29706004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 35987425 - 35987342
Alignment:
Q  478 agagcaatgatatttgaacaaccatttg-gtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| ||||||  |||||  | | ||||||||||| ||||||  ||||| |||||||||||| ||||    
T  35987425 agagcaatgatatttgaacaatcatttgcttacaatttttatgacaaccttctttttctatctttttattggtcaaaaataatg 35987342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 555
Target Start/End: Original strand, 47773866 - 47773942
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacc-tatttgacaaccttccttttctcccttttcattggtcaaaaa 555  Q
    |||| ||| ||||||||||||||||||||||||||| | ||||||||| ||  |||| | | |||||||||||||||||    
T  47773866 agagtaatcatatttgaacaaccatttggtacaaccttttttgacaacttt--tttttttctttttcattggtcaaaaa 47773942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 559
Target Start/End: Original strand, 55344190 - 55344265
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatt-tgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||| ||||  |||||| | || ||||||| || |||||||| |||||||||||| |||||||||    
T  55344190 tgatatttgaacaactatttcatacaacattttatgacaacttttcttttctctcttttcattggttaaaaacaat 55344265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 485 - 555
Target Start/End: Complemental strand, 22154040 - 22153970
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaa 555  Q
    ||||||||| |||||||||||||||||| |   ||||||| ||| ||| ||| ||||||||||||| ||||    
T  22154040 tgatatttgtacaaccatttggtacaactttaatgacaactttcatttgctctcttttcattggtccaaaa 22153970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 611 - 641
Target Start/End: Original strand, 29800590 - 29800620
Alignment:
Q  611 tcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||||||||||||||||||||    
T  29800590 tcacaaagtagttgtacaaatatcatttctc 29800620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 501 - 555
Target Start/End: Original strand, 31176349 - 31176403
Alignment:
Q  501 atttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaa 555  Q
    ||||| |||||||||||||||||| |||||||||||  || |||||| |||||||    
T  31176349 atttgatacaacctatttgacaactttccttttctcttttctcattgatcaaaaa 31176403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 607 - 641
Target Start/End: Complemental strand, 35272061 - 35272027
Alignment:
Q  607 gttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||    
T  35272061 gttgtcacaaagtggttgtacaaatatcatttctc 35272027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 108464 - 108431
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  108464 ttgtcacaaagtggttgtacaaatatcatttctc 108431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 5398951 - 5398918
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  5398951 ttgtcacaaagtggttgtacaaatatcatttctc 5398918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 12792671 - 12792638
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  12792671 ttgtcacaaagtggttgtacaaatatcatttctc 12792638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 482 - 527
Target Start/End: Original strand, 16267799 - 16267844
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacctatttgacaacctt 527  Q
    |||| |||||||||||| ||||||||||||| | ||||||||||||    
T  16267799 caataatatttgaacaatcatttggtacaacatttttgacaacctt 16267844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 514 - 559
Target Start/End: Complemental strand, 18181588 - 18181543
Alignment:
Q  514 tatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||||||| |||||||| ||||||||||||| ||| ||||    
T  18181588 tatttgacaacctttcttttctctcttttcattggtctaaaccaat 18181543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 20215981 - 20215948
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  20215981 ttgtcacaaagtggttgtacaaatatcatttctc 20215948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 483 - 559
Target Start/End: Complemental strand, 29525410 - 29525333
Alignment:
Q  483 aatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||||||||||| ||| || ||| | | | ||| ||||| ||||||||| ||||| ||||||||||||||||    
T  29525410 aatgatatttgaacaaccttttagtgacagcttttgtgataacctaccttttctctctttttattggtcaaaaacaat 29525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Complemental strand, 31997849 - 31997816
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    ||||||||||||||| ||||||||||||||||||    
T  31997849 aagttgtcacaaagtggttgtacaaatatcattt 31997816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Original strand, 34607958 - 34607991
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  34607958 ttgtcacaaagtggttgtacaaatatcatttctc 34607991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Original strand, 34733326 - 34733359
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    ||||||||||||||| ||||||||||||||||||    
T  34733326 aagttgtcacaaagtggttgtacaaatatcattt 34733359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 45205321 - 45205288
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||| |||||||||||||||||||||||    
T  45205321 ttgtcacaaaatagttgtacaaatatcatttctc 45205288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 1e-68; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 666 - 938
Target Start/End: Complemental strand, 6822790 - 6822518
Alignment:
Q  666 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaata 765  Q
    |||| |||| |||||||||||||   || || |||||| ||||||||| ||| | | || |||  |||||||||||||||||||||  ||| | | ||||    
T  6822790 aataattgacattttgatcacataatccacatttatcacaaatcatttttctcttgacccacatctatcatcatatatctcaaatttattcatgataata 6822691  T
Q  766 tgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattga 865  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||| |||||||| |||||||||||||||||||| ||||||| ||||| |||||||||||    
T  6822690 tgaatattatcaagaatcggatgtgaaatcgaatgagagatgatcggttaaataattgtttagttatttatataaagaaagaaatttttattgatattga 6822591  T
Q  866 aaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaattttt 938  Q
    |||||| |||||||||| |||||||||||||| |||||||  |||||||||||||||| ||||| ||||||||    
T  6822590 aaatgaacaaatcattcaaagtttccataatatgaaaaattgtaaaggacaattattaatgctacaaattttt 6822518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 652 - 795
Target Start/End: Original strand, 11769760 - 11769903
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 751  Q
    |||||||||| | |||||||| | |||||||||| ||||||| ||||| ||| ||||||||||||||| |||  | | ||||||||||||||||||||||    
T  11769760 tagtataatgtattaatagttaacattttgatcatatggcccacacttctcacaaatcatttctcttttggctcaaatatatcatcatatatctcaaatt 11769859  T
Q  752 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatc 795  Q
     |||||| | ||||| ||||| ||||||||||||||||||||||    
T  11769860 ttttcttgataatataaatataatcaagaatcggatgcgaaatc 11769903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 8173201 - 8173282
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||    
T  8173201 gagcaatgatatttgaacaaccatttggtataacctatttgacaacctttcttttctctcttttcattggtcagaaacaatg 8173282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 698 - 882
Target Start/End: Original strand, 18250755 - 18250939
Alignment:
Q  698 ttatcataaatcatttctctttcggcctacacat-atcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatca 796  Q
    |||||| |||| |||||||| | || | |||||| ||| |||||||| |||||||||||||| | ||||||||||||||||||||||  |||| |||||     
T  18250755 ttatcacaaattatttctctcttggtccacacattatcgtcatatatttcaaattctttcttgataatatgaatattatcaagaatcaaatgcaaaatcg 18250854  T
Q  797 aatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattc 882  Q
      ||| ||||||   | ||||| |||||||||||||||||||||||||| ||||||| ||| ||||| |||||||| |||||||||    
T  18250855 cgtgagagatgaccagataaatgattgtttagttatttatatagagaaaaatatttttattaatattcaaaatgag-aaatcattc 18250939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 478 - 559
Target Start/End: Complemental strand, 32730072 - 32729991
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  32730072 agagcaatgatatatgaacaaccatttggtacaacctatttgacaacattctttttctctcttttcattgatcaaaaacaat 32729991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 21443871 - 21443789
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||| |||| || |||||||||||||||||||||||    
T  21443871 agagcaatgatatttgaacaactatttggtacaatctattggacaaccttcattttatctcttttcattggtcaaaaacaatg 21443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 16533147 - 16533230
Alignment:
Q  478 agagcaatgatatttgaacaacca-tttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  16533147 agagcaatgatatttgaacaatcaatttggtataacctatttgacaactttccttttctctcttttcattggtaaaaaacaatg 16533230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 820 - 919
Target Start/End: Original strand, 33106823 - 33106920
Alignment:
Q  820 attgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaatt 919  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| || ||| |||||||  ||||||| ||||||| ||||    
T  33106823 attgtttagttatttatatagagaaatatatttttattgatattgaaaatgag-aaatcattcaaaatttacataata-taaaaatcgtaaaggataatt 33106920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 652 - 768
Target Start/End: Original strand, 33106707 - 33106823
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 751  Q
    |||||||||| |  ||||||||| ||||||| || |||   | ||||||||| |||| |||||||| | |||||||||||||  |||||||| |||||||    
T  33106707 tagtataatgtatcaatagttgacattttgaccatatgattcacacttatcacaaattatttctctcttggcctacacatatagtcatatatatcaaatt 33106806  T
Q  752 ctttcttaaaaatatga 768  Q
    ||||||| | |||||||    
T  33106807 ctttcttgataatatga 33106823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 12441574 - 12441538
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||||||||||||||||||||||||||    
T  12441574 aagttgtcacaaagtagttgtacaaatatcatttctc 12441538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 523
Target Start/End: Original strand, 25567382 - 25567426
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaa 523  Q
    |||||||||||||||||||||||||||||||||||| | ||||||    
T  25567382 gagcaatgatatttgaacaaccatttggtacaacctttatgacaa 25567426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 12044513 - 12044431
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||| || | ||||| | | ||||||||| | |||||||  || |||||||||||||||||||    
T  12044513 gagcaatgatatttgaacaaccatgtgctaacaacttttatgacaacctcctttttctcttttctcattggtcaaaaacaatg 12044431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 559
Target Start/End: Original strand, 11742872 - 11742953
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||||| |||||| || || |||| | | ||||||||| | ||||||| ||| ||||||||||||||||||    
T  11742872 gagcaatgatatttgaagaaccatgtgctaacaacttctatgacaacctcctttttctctcttctcattggtcaaaaacaat 11742953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 27334894 - 27334858
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27334894 aagttgtcacaaaatagttgtacaaatatcatttctc 27334858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 27395634 - 27395598
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27395634 aagttgtcacaaaatagttgtacaaatatcatttctc 27395598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 32457287 - 32457323
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  32457287 aagttgtcacaaagtggttgtacaaatatcatttctc 32457323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 608548 - 608631
Alignment:
Q  478 agagcaatgatatttgaacaacca-tttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||| | |||||||||||   |  |||||||||  | ||||| ||| |||||||||||||||||||    
T  608548 agagcaatgatatttgaacaactattttggtacaactgttgggacaaccttgttgttctctcttctcattggtcaaaaacaatg 608631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 1897862 - 1897787
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||| | |||||  ||||| | | |||||||||   ||||||| |||||||||||||||||||||||    
T  1897862 tgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaacaatg 1897787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 640
Target Start/End: Complemental strand, 6435072 - 6435037
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttct 640  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6435072 aagttgtcacaaagtggttgtacaaatatcatttct 6435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 20712250 - 20712167
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||| |||||||||||||||||||||| | ||||| | | ||||||||| | ||||||| ||| || ||| ||||||||||||    
T  20712250 agagctatgatatttgaacaaccatttgttaacaacttctatgacaacctcctttttctctcttctcgttgatcaaaaacaatg 20712167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 23653780 - 23653862
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||| ||||||||||||||||||| | ||||| | | |||||||||   ||||||| ||| |||| |||||||||||||    
T  23653780 agagcaataatatttgaacaaccatttgctaacaacttttatgacaacctcatttttctctcttctcataggtcaaaaacaat 23653862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 25561831 - 25561910
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| ||||||||| |||| | ||||||  ||  ||||||| ||| | |||||||||||| ||||    
T  25561831 gagcaatgatatttgaacaactatttggtaccacctttatgacaaattt--ttttctctcttcttattggtcaaaaataatg 25561910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 26101345 - 26101424
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| ||||||||| |||| | ||||||  ||  ||||||| ||| | |||||||||||| ||||    
T  26101345 gagcaatgatatttgaacaactatttggtaccacctttatgacaaattt--ttttctctcttcttattggtcaaaaataatg 26101424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Original strand, 28549045 - 28549078
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    |||||||||||||| |||||||||||||||||||    
T  28549045 aagttgtcacaaagcagttgtacaaatatcattt 28549078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Original strand, 30796113 - 30796146
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  30796113 ttgtcacaaagtggttgtacaaatatcatttctc 30796146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 1e-68; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 657 - 941
Target Start/End: Original strand, 28528939 - 28529223
Alignment:
Q  657 taatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttc 756  Q
    ||||| || |||| |||| ||||||||||||||| || ||||||||| |||| |||||||||| || | |||||||||||||||||||||||||||||||    
T  28528939 taatgtaccaataattgacattttgatcacatggtccacacttatcagaaataatttctcttttggtccacacatatcatcatatatctcaaattctttc 28529038  T
Q  757 ttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcat 856  Q
    || | ||||||| |||||||||||||||||||| ||||  ||||| ||||||| ||||| || |||||||||||||||||| ||||||| ||||||| ||    
T  28529039 ttgacaatatgattattatcaagaatcggatgcaaaattgaatgagagatgatcggttacatgattgtttagttatttatacagagaaaaatatttttat 28529138  T
Q  857 tgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttata 941  Q
    |||||||||||||||  ||||| ||  ||||||| |||||| ||||||||  | || |||||||||| ||||| | |||||||||    
T  28529139 tgatattgaaaatgataaaatcttttaaagtttctataatatgaaaaatcggagagaacaattattaatgctacagatttttata 28529223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 654 - 897
Target Start/End: Complemental strand, 44719081 - 44718840
Alignment:
Q  654 gtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattct 753  Q
    |||||||| |||||||||||||||||| | | ||| | || ||||||| |||||||||||||||||  |||||||  |||||||| ||||||||||||||    
T  44719081 gtataatgtactaatagttgatatttttacctcattgtcctcacttattataaatcatttctctttttgcctaca--tatcatcaaatatctcaaattct 44718984  T
Q  754 ttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatttt 853  Q
    ||||| | ||||||||| ||||||||| | ||||| |||||| ||||||| || || |||||||| |||||||||||||||||||||||||||||| ||     
T  44718983 ttcttgataatatgaattttatcaagatttggatgtgaaatcgaatgaaaaataatcggttaaatgattgtttagttatttatatagagaaagatacttc 44718884  T
Q  854 cattgatattgaaaatgagcaaatcattctaagtttccataata 897  Q
     | ||||||||||||| || ||||||||  |||||| |||||||    
T  44718883 tactgatattgaaaataagaaaatcattgaaagttttcataata 44718840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 481 - 560
Target Start/End: Original strand, 19668078 - 19668157
Alignment:
Q  481 gcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19668078 gcaatgatatttgaacaaccatttgatacaacctatttgataaccttccttttctctcttttcattggtcaaaaacaatg 19668157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 721 - 853
Target Start/End: Original strand, 42530893 - 42531033
Alignment:
Q  721 ggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatat--------tatcaagaatcggatgcgaaatcaaatgaaagatgattgg 812  Q
    |||| |||| |||||||||||||||||||  ||||||| | |||||||||||        ||||||||||||||||||||||||||||| ||||||| ||    
T  42530893 ggcccacacttatcatcatatatctcaaaaactttcttgataatatgaatattatcatattatcaagaatcggatgcgaaatcaaatgagagatgatcgg 42530992  T
Q  813 ttaaatcattgtttagttatttatatagagaaagatatttt 853  Q
    |||||| ||||||||||||||||||||| |||| |||||||    
T  42530993 ttaaatgattgtttagttatttatatagtgaaatatatttt 42531033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 40951373 - 40951291
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  40951373 agagcaatgatatatgaacaaccattaggtacaacctatttgacaaccttccttttctctcttttcattggtaaaaaacaatg 40951291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 481 - 560
Target Start/End: Original strand, 5167633 - 5167712
Alignment:
Q  481 gcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  5167633 gcaatgatatttgaacaaccatttggtataacctacttgacaaccttcattttctctcttttcattggtcaaaaacaatg 5167712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 30856986 - 30856908
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  30856986 caatgatatatgaacaaccatttggtacaatttatttgacaaccttctttttctctcttttcattggtcaaaaacaatg 30856908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 4842408 - 4842489
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  4842408 gagcaatgatatatgaactaccatttgatacaacctatttgacaaccttcattttctcttttttcattggtcaaaaacaatg 4842489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 13553316 - 13553244
Alignment:
Q  488 tatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||    
T  13553316 tatttgaacaaccatttggtacaacctatttgacaatctttcttttctctcttttcattggtcaaaaataatg 13553244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 15283137 - 15283217
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    |||||||||||||||||| |||||||| ||||||  |||||||||||||||||||||||  |||| |||||||||||||||    
T  15283137 agagcaatgatatttgaataaccatttcgtacaatttatttgacaaccttccttttctctttttttattggtcaaaaacaa 15283217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 650 - 749
Target Start/End: Complemental strand, 42071626 - 42071527
Alignment:
Q  650 aatagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 749  Q
    |||||||||||| |||||||||||  ||||||||||||||  || ||||||||| ||||||||||||| | || | |||| |||||||||||||||||||    
T  42071626 aatagtataatgtactaatagttggcattttgatcacatgatccacacttatcacaaatcatttctctcttggtccacacctatcatcatatatctcaaa 42071527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 486 - 558
Target Start/End: Complemental strand, 10288327 - 10288255
Alignment:
Q  486 gatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    |||||||||| ||  ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||    
T  10288327 gatatttgaataattatttggtacaatctatttgacaatcttccttttctctcttttcattggtcaaaaacaa 10288255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 21805674 - 21805755
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||| |||||||||||||||||| || ||||||||||||| | ||||| |||  |||||||||||| ||||    
T  21805674 agagcaatgatattttaacaaccatttggtacaatctttttgacaaccttcttattctctcttcccattggtcaaaagcaat 21805755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 36763407 - 36763488
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    |||||||||||||||||||||||||||| || |||  | | ||||||||||| ||||||| |||||||||||||||||||||    
T  36763407 agagcaatgatatttgaacaaccatttgttaacaatttttatgacaaccttctttttctctcttttcattggtcaaaaacaa 36763488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 35792354 - 35792426
Alignment:
Q  488 tatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||  |||||||||||| ||||||||| || |||| ||||||||| |||||||||||||    
T  35792354 tatttgaacaaccatttaatacaacctatttaacaaccttctttctctctcttttcattagtcaaaaacaatg 35792426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 825 - 897
Target Start/End: Complemental strand, 42071489 - 42071417
Alignment:
Q  825 ttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataata 897  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||| ||||||||  ||||||| ||||||    
T  42071489 ttagttatttatatagataaatatatttttattgatattgaaaatgagaaaatcatttaaagtttcgataata 42071417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 37631255 - 37631337
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||| | ||||| | | |||||||||   ||||||| ||| |||||||||||||||||||    
T  37631255 gagcaatgatatttgaacaaccatttgctaacaacttttatgacaacctcttttttctctcttctcattggtcaaaaacaatg 37631337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 43791678 - 43791760
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||| |||||||||||||||||| ||| || ||||| | | ||||||||| ||||||||| ||||| ||||||||||||||||    
T  43791678 agagtaatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctctttttattggtcaaaaacaat 43791760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 483 - 520
Target Start/End: Complemental strand, 13553347 - 13553310
Alignment:
Q  483 aatgatatttgaacaaccatttggtacaacctatttga 520  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13553347 aatgatatttgaacaaccatttggtacaacctatttga 13553310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 478 - 523
Target Start/End: Complemental strand, 19637410 - 19637365
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaa 523  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||    
T  19637410 agagcaatgatatttgaacaaccatttggtacaacctttatgacaa 19637365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 478 - 523
Target Start/End: Complemental strand, 19836003 - 19835958
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaa 523  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||    
T  19836003 agagcaatgatatttgaacaaccatttggtacaacctttatgacaa 19835958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 606 - 641
Target Start/End: Complemental strand, 21490738 - 21490703
Alignment:
Q  606 agttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||||||||||||||||||||||||    
T  21490738 agttgtcacaaagtagttgtacaaatatcatttctc 21490703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 4738607 - 4738643
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4738607 aagttgtcacaaagtggttgtacaaatatcatttctc 4738643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 5067681 - 5067717
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5067681 aagttgtcacaaagtagatgtacaaatatcatttctc 5067717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 478 - 557
Target Start/End: Complemental strand, 8353019 - 8352939
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaaca 557  Q
    ||||||||||||||| |||||||||||| || |||| |   ||||||||||| ||||||| ||| |||||| |||||||||    
T  8353019 agagcaatgatattttaacaaccatttgctaacaacttcaatgacaaccttctttttctctcttctcattgatcaaaaaca 8352939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 14140372 - 14140408
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  14140372 aagttgtcacaaattagttgtacaaatatcatttctc 14140408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 30856843 - 30856807
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30856843 aagttgtcacaaagtggttgtacaaatatcatttctc 30856807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 31629640 - 31629604
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31629640 aagttgtcaaaaagtagttgtacaaatatcatttctc 31629604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 33296106 - 33296142
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  33296106 aagttgtcacaaagtggttgtacaaatatcatttctc 33296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 36435717 - 36435681
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36435717 aagttgtcacaaagtggttgtacaaatatcatttctc 36435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 1574637 - 1574554
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| | ||||| |   |||||||||   ||| ||| |||||||||||||||||| ||||    
T  1574637 agagcaatgatatttgaacaaccatttgctaacaactttaatgacaacctcattttactctcttttcattggtcaaaaaaaatg 1574554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 3091917 - 3091842
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||  ||||| |||||| | | ||||||| |   ||||||| |||||||||||||||||||||||    
T  3091917 tgatatttgaacaattatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatg 3091842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 11164271 - 11164346
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| ||||| |||||| | | ||||||| |   ||||||| |||||||||||| ||||||||||    
T  11164271 tgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaatg 11164346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 13711237 - 13711162
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| |||| ||||||| | | ||||||| |   ||||||| |||||||||||| ||||||||||    
T  13711237 tgatatttgaacaactattttgtacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaatg 13711162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 42251815 - 42251890
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||| ||||| ||||||| ||||| ||| ||||||| |   ||||||| ||||||||||||||||| |||||    
T  42251815 tgatatttaaacaatcatttggaacaacttatgtgacaacttcttttttctctcttttcattggtcaaaatcaatg 42251890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 641
Target Start/End: Original strand, 42283275 - 42283310
Alignment:
Q  606 agttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||| |||||||||||||||||||||    
T  42283275 agttgtcacaaagtggttgtacaaatatcatttctc 42283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 305857 - 305939
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttt-tctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||| |||||||||||| || | ||||||| ||  ||| |||| ||| | ||||||| |||||||||    
T  305857 gagcaatgatatttgaacaatcatttggtacaatctttatgacaacttttttttctctctcttcttattggtcgaaaacaatg 305939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 803 - 924
Target Start/End: Original strand, 21490265 - 21490384
Alignment:
Q  803 agatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaa 902  Q
    |||||| ||||||||| |||||   |||| ||| |||||||   ||||||| ||||||||||||| |||| ||||||||| | ||||| | |||| ||||    
T  21490265 agatgaatggttaaatgattgtc--gttacttagatagagatgtatatttttattgatattgaaattgagaaaatcattcaatgtttcaagaatatgaaa 21490362  T
Q  903 aatcataaaggacaattattat 924  Q
    |||| ||||  ||| |||||||    
T  21490363 aatcgtaaacaacacttattat 21490384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 485 - 559
Target Start/End: Original strand, 42665707 - 42665781
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||| |||||||||||||||||| |   ||||||| ||| ||| |||  |||||||||||| ||||||||    
T  42665707 tgatatttgtacaaccatttggtacaactttgatgacaactttcatttgctcttttttcattggtccaaaacaat 42665781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 44059610 - 44059692
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||| ||| ||||||||||||||||||| | | ||| | | ||||||||| | ||||||| ||||| ||||||||||||||||    
T  44059610 agagtaattatatttgaacaaccatttgatgataacttttgtgacaacctactttttctctcttttaattggtcaaaaacaat 44059692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Original strand, 5167780 - 5167813
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  5167780 ttgtcacaaagtggttgtacaaatatcatttctc 5167813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 6365219 - 6365186
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  6365219 ttgtcacaaagtggttgtacaaatatcatttctc 6365186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Original strand, 15283288 - 15283321
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  15283288 ttgtcacaaagtggttgtacaaatatcatttctc 15283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 36133007 - 36132974
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  36133007 ttgtcacaaagtggttgtacaaatatcatttctc 36132974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 41040299 - 41040266
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  41040299 ttgtcacaaagtggttgtacaaatatcatttctc 41040266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 411 - 468
Target Start/End: Complemental strand, 44719156 - 44719099
Alignment:
Q  411 gggacggatgtatgttggtgaatgtgtgagcttgtgcctacacaaacattttagaaac 468  Q
    |||||||||||| |||| |||||||||| |||| |||||||| ||| |||| ||||||    
T  44719156 gggacggatgtacgttgttgaatgtgtgggcttctgcctacataaaaatttcagaaac 44719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 1e-59; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 652 - 976
Target Start/End: Complemental strand, 15810991 - 15810667
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 751  Q
    |||||||||| |  ||||||| | ||||||| |||| || |  ||||||||| |||| |||| ||||| |||| ||| ||||||||||||||||||||||    
T  15810991 tagtataatgtatcaatagttcacattttgaccacacggtctacacttatcacaaattatttttcttttggcccacatatatcatcatatatctcaaatt 15810892  T
Q  752 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 851  Q
     ||| || | | ||||||||||||||||||| |||||| ||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||| |||||    
T  15810891 attttttgatagtatgaatattatcaagaattggatgcaaaatcgaatgagagatgatcggttaaatgattgtttagttatttatatagagaaatatatt 15810792  T
Q  852 ttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaatg-tgcac 950  Q
    || |||||| || ||||| || ||| | ||| |||||||| ||||| |||||||  || ||||||||||||| ||||| |||||||| || ||| ||| |    
T  15810791 tttattgattttcaaaataagaaaaccgttcaaagtttccgtaatatgaaaaattgtagaggacaattattaatgctacaaatttttttatatgatgc-c 15810693  T
Q  951 cccactattcaaaaatcctggatccg 976  Q
     |||||||| ||||||||| ||||||    
T  15810692 tccactattaaaaaatcctagatccg 15810667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 652 - 976
Target Start/End: Complemental strand, 15727146 - 15726823
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 751  Q
    |||||||||| |  ||||||||| |||||||||| | |  || || |||||| |||| |||| | ||| |||| ||| |||| |||||||||||||||||    
T  15727146 tagtataatgtatcaatagttgacattttgatcatacgatccacatttatcacaaattatttgtattttggcccacatatataatcatatatctcaaatt 15727047  T
Q  752 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 851  Q
     |||||| | | |||||||||||||||||||| ||||| ||||  ||||| ||||||| |||||||| |||||||||||||||||||| ||||| |||||    
T  15727046 atttcttgatagtatgaatattatcaagaatctgatgcaaaattgaatgagagatgatcggttaaatgattgtttagttatttatataaagaaatatatt 15726947  T
Q  852 ttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaatgtgcacc 951  Q
    || |||||| || ||||| || ||| ||||| |||||||||||||| ||||||| ||| ||||||||||||| ||||| |||||||| || ||| |  ||    
T  15726946 tttattgattttcaaaataagaaaaccattcaaagtttccataatatgaaaaattatagaggacaattattaatgctacaaatttttttatatg-gtgcc 15726848  T
Q  952 ccactattcaaaaatcctggatccg 976  Q
    |||||||| |||||| ||| |||||    
T  15726847 ccactattaaaaaattctgaatccg 15726823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 705 - 970
Target Start/End: Complemental strand, 29368713 - 29368448
Alignment:
Q  705 aaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 804  Q
    ||||||||||||| | |||  ||| |||||||||||||||||||||||||| || | |||||||||||||||||||| ||||| |  |||| ||||  ||    
T  29368713 aaatcatttctctcttggctcacatatatcatcatatatctcaaattctttattgataatatgaatattatcaagaaccggatacataatcgaatgtgag 29368614  T
Q  805 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaa 904  Q
    ||||| |||||||| ||||||   ||||||||||| ||||| ||| ||| |||||||||||||||||| ||| ||||| ||||||| |||||| ||||||    
T  29368613 atgatcggttaaatgattgttcgattatttatataaagaaatatacttttattgatattgaaaatgagaaaaccattcaaagtttcaataatatgaaaaa 29368514  T
Q  905 tcataaaggacaattattattgctataaatttttataaatg-tgcaccccactattcaaaaatcctg 970  Q
    |  || ||||||||||||| ||||| ||||||||||| ||| ||| ||||| || ||||||||||||    
T  29368513 ttctagaggacaattattaatgctacaaatttttatatatgatgc-ccccaataatcaaaaatcctg 29368448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 666 - 868
Target Start/End: Complemental strand, 4930861 - 4930660
Alignment:
Q  666 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaata 765  Q
    ||||||||| ||||||| |||||| ||  ||||| ||| ||||||||||| | | || | |||||||||| ||| ||||||||||||||| || | ||||    
T  4930861 aatagttgagattttgaccacatgacctacacttctcacaaatcatttctttcttggtccacacatatca-catgtatctcaaattcttttttgataata 4930763  T
Q  766 tgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattga 865  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||  ||||||| ||| |||||||||||||||| ||||| ||||||| |||||||||||    
T  4930762 tgaatattatcaagaatcggatgtgaagtcgaatggaagatgatcagttaaatgattatttagttatttatataaagaaatatatttttattgatattga 4930663  T
Q  866 aaa 868  Q
    |||    
T  4930662 aaa 4930660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 9636047 - 9636128
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  9636047 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttcattttctctcttttcattggtcaaaaacaatg 9636128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 91398 - 91316
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  91398 agagcaatgatatttgaacaaccatttgatacaacctatttgacaacctttcttttctctcttttcattggtcaaaaacaatg 91316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 478 - 554
Target Start/End: Complemental strand, 24792635 - 24792559
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaa 554  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  24792635 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttcattttctctcttttcattggtcaaaa 24792559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 36581355 - 36581437
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||| |||||||||||||||||    
T  36581355 agagcaatgatatttgaacaaccattttgtacaacctatttgacaaccttcattttttctctttttattggtcaaaaacaatg 36581437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 15639568 - 15639486
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||| || |||||||    
T  15639568 agagcaatgatatttgaacaaccatttggtacaacctttttgacaaccttcttcttctcccttctcattggtgaagaacaatg 15639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 13734249 - 13734330
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||  ||| |||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  13734249 gagcaattgtatatgaacaaccatttggtacaatctatttgacaactttccttttctctcttttcattggtcaaaaacaatg 13734330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 824 - 976
Target Start/End: Original strand, 22399404 - 22399555
Alignment:
Q  824 tttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattatta 923  Q
    ||||||||||||||| ||||||  | |||  |||||||||||||||||| ||||||||  |||||||||||||| ||| |||  || |||||||||| ||    
T  22399404 tttagttatttatat-gagaaatgtttttctattgatattgaaaatgagaaaatcatttaaagtttccataatatgaataattctataggacaattacta 22399502  T
Q  924 ttgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatccg 976  Q
     ||||| ||||||||||| || ||||  ||||||||||||||||||||||||||    
T  22399503 atgctacaaatttttatatatagtgc-gcccactattcaaaaatcctggatccg 22399555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 28904179 - 28904093
Alignment:
Q  478 agagcaatgatatttgaacaacca----tttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  28904179 agagcaatgatatttgaacaaccaattatttggtacaacctatttgacaaccttccttttctctttttttattggtcaaaaacaatg 28904093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 28940574 - 28940488
Alignment:
Q  478 agagcaatgatatttgaacaacca----tttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  28940574 agagcaatgatatttgaacaaccaattatttggtacaacctatttgacaaccttccttttctctttttttattggtcaaaaacaatg 28940488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 479 - 558
Target Start/End: Original strand, 582758 - 582837
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    |||||||||||||||||||| ||||||||||||  | ||||||||||||| || |||| |||||||||||||||||||||    
T  582758 gagcaatgatatttgaacaatcatttggtacaagatttttgacaaccttctttctctctcttttcattggtcaaaaacaa 582837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 479 - 558
Target Start/End: Complemental strand, 7144757 - 7144678
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    |||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||| ||||| ||||||||| |||||    
T  7144757 gagcaatgatatttgagcaaccatttgatacaacctttttgacaaccttctttttctctctttttattggtcaataacaa 7144678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 479 - 559
Target Start/End: Complemental strand, 19437439 - 19437359
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||| ||||||||||||||| |||| ||||||| | |||||||||||| |||||||| ||||| ||||||||||||||||    
T  19437439 gagcactgatatttgaacaactatttagtacaacatttttgacaacctttcttttctctcttttgattggtcaaaaacaat 19437359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 6865675 - 6865757
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||| ||||||||||||| ||||| || || |||||||||||| ||  ||||||| |||||||||||||||||||||||    
T  6865675 agagcaataatatttgaacaactatttgatataatctatttgacaacttttattttctctcttttcattggtcaaaaacaatg 6865757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 36624496 - 36624419
Alignment:
Q  483 aatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||| |||||| |||||  ||||||||||  ||| ||||||| |||||||||||||||||||||||    
T  36624496 aatgatatttgaacaagcatttgatacaatttatttgacaattttcattttctctcttttcattggtcaaaaacaatg 36624419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 39595452 - 39595375
Alignment:
Q  483 aatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||| |||||| | | ||||||| |   ||||||| |||||||||||||||||||||||    
T  39595452 aatgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatg 39595375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 5698216 - 5698298
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||| |||||| ||||||||||||| |   ||||||||||| |||||||  || | |||||||||||||||||    
T  5698216 agagcaatgatattagaacaatcatttggtacaactttcatgacaaccttctttttctcttttgttattggtcaaaaacaatg 5698298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 26626707 - 26626789
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| |||||| |   ||||||||||  |||||||  || | |||||||||||||||||    
T  26626707 agagcaatgatatttgaacaaccatttgttacaactttcatgacaaccttttttttctcttttgttattggtcaaaaacaatg 26626789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 483 - 559
Target Start/End: Complemental strand, 23991410 - 23991333
Alignment:
Q  483 aatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||||||||||| || |||| | ||||| |||||   ||||||| ||||||||||||||||||||||    
T  23991410 aatgatatttgaacaaccatttgctaacaacttttttgagaacctcatttttctctcttttcattggtcaaaaacaat 23991333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 26627512 - 26627431
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||||||||| |   ||||||||||| |||||||  || | | |||||||||||||||    
T  26627512 gagcaatgatatttgaacaactatttggtacaactttcatgacaaccttctttttctcttttattaatggtcaaaaacaatg 26627431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 478 - 523
Target Start/End: Complemental strand, 38387893 - 38387848
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaa 523  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||    
T  38387893 agagcaatgatatttgaacaaccatttggtacaacctttatgacaa 38387848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 125128 - 125092
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||||||||||||||||||||||||||    
T  125128 aagttgtcacaaagtagttgtacaaatatcatttctc 125092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 514
Target Start/End: Complemental strand, 20040957 - 20040921
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacct 514  Q
    |||||||||||||||||||||||||||||||||||||    
T  20040957 agagcaatgatatttgaacaaccatttggtacaacct 20040921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 485 - 559
Target Start/End: Complemental strand, 125268 - 125194
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||||||||| |||||| | |  |||||| |   ||||||| ||||||||||||||||||||||    
T  125268 tgatatttgaacaaccatttgatacaacttttgcgacaacttcttttttctctcttttcattggtcaaaaacaat 125194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 11880875 - 11880957
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||| ||||| |||||| || |||| |   ||||||||||| ||||||| ||| |||||||||||||||||||    
T  11880875 gagcaatgatattttaacaatcatttgctaacaacttcaatgacaaccttctttttctctcttctcattggtcaaaaacaatg 11880957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 483 - 560
Target Start/End: Original strand, 12612909 - 12612987
Alignment:
Q  483 aatgatatttgaacaaccattt-ggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||| |||||||| | |  |||||||||  | ||||| ||| |||||||||||||||||||    
T  12612909 aatgatatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaatg 12612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 478 - 524
Target Start/End: Original strand, 32732004 - 32732050
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaac 524  Q
    |||||||||||||||||||||||||||||||||| || | |||||||    
T  32732004 agagcaatgatatttgaacaaccatttggtacaatctttatgacaac 32732050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 740 - 782
Target Start/End: Complemental strand, 38351768 - 38351726
Alignment:
Q  740 atatctcaaattctttcttaaaaatatgaatattatcaagaat 782  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  38351768 atatctcaaattctttcttgataatatgaatattatcaagaat 38351726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 721 - 782
Target Start/End: Original strand, 17228914 - 17228975
Alignment:
Q  721 ggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaat 782  Q
    |||| ||| ||||||||||||| |||||||||||| || | |||||||||||| ||||||||    
T  17228914 ggcccacatatatcatcatatagctcaaattcttttttgataatatgaatattgtcaagaat 17228975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 1774318 - 1774354
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||||| |||||||||||||||||||    
T  1774318 aagttgtcacaaagtagatgtacaaatatcatttctc 1774354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 6865811 - 6865847
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  6865811 aagttgtcacaaagtggttgtacaaatatcatttctc 6865847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 19127160 - 19127124
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19127160 aagttgtcacaaagtggttgtacaaatatcatttctc 19127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 23991169 - 23991205
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23991169 aagttgtcacaaagtggttgtacaaatatcatttctc 23991205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 28811465 - 28811429
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  28811465 aagttgtcacaaagtggttgtacaaatatcatttctc 28811429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 637
Target Start/End: Complemental strand, 29227753 - 29227721
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatt 637  Q
    |||||||||||||||||||||||||||||||||    
T  29227753 aagttgtcacaaagtagttgtacaaatatcatt 29227721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 34381048 - 34381012
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34381048 aagttgtcacaaagtggttgtacaaatatcatttctc 34381012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 36713213 - 36713249
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36713213 aagttgtcacaaagtggttgtacaaatatcatttctc 36713249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 39595308 - 39595272
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39595308 aagttgtcacaaagtggttgtacaaatatcatttctc 39595272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 4930936 - 4930877
Alignment:
Q  409 cagggacggatgtatgttggtgaatgtgtgagcttgtgcctacacaaacattttagaaac 468  Q
    |||||||| |||||||||| || ||||||| || ||||||| |||||| |||||||||||    
T  4930936 cagggacgaatgtatgttgttggatgtgtgggcatgtgcctccacaaaaattttagaaac 4930877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 641
Target Start/End: Original strand, 14508193 - 14508228
Alignment:
Q  606 agttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||||    
T  14508193 agttgtcacaaaatagttgtacaaatatcatttctc 14508228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 33567134 - 33567209
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||| |||||||||||||| |||||| | | ||||||  |   ||||||| |||||||||||||||||||||||    
T  33567134 tgatatatgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaatg 33567209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 41460300 - 41460217
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||| ||||||||||||||||||| | ||||| |   |||||||||   ||||||| |||||||||||| ||||||||||    
T  41460300 agagcaataatatttgaacaaccatttgctaacaactttcatgacaacctcatttttctctcttttcattggttaaaaacaatg 41460217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 3960057 - 3960139
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||| | ||||| |   |||||||||   |||| || |||||||||| ||||||||||||    
T  3960057 gagcaatgatatttgaacaaccatttgctaacaactttcatgacaacctcatttttttctcttttcattgatcaaaaacaatg 3960139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 639
Target Start/End: Complemental strand, 12910820 - 12910786
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttc 639  Q
    ||||||||||||||| |||||||||||||||||||    
T  12910820 aagttgtcacaaagtggttgtacaaatatcatttc 12910786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 828 - 878
Target Start/End: Original strand, 17229004 - 17229054
Alignment:
Q  828 gttatttatatagagaaagatattttcattgatattgaaaatgagcaaatc 878  Q
    |||||||| ||||||||| ||||||| |||||| ||||||||||| |||||    
T  17229004 gttatttacatagagaaaaatatttttattgattttgaaaatgagaaaatc 17229054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 483 - 560
Target Start/End: Original strand, 3722969 - 3723046
Alignment:
Q  483 aatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||| || |||||||||||| ||||| |   ||||||| ||| ||||||| ||||| ||||||| |||||||||    
T  3722969 aatgatatatgtacaaccatttgggacaactttgatgacaactttcattttctctctttttattggtccaaaacaatg 3723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Complemental strand, 4098659 - 4098626
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    ||||||||||||| ||||||||||||||||||||    
T  4098659 aagttgtcacaaaatagttgtacaaatatcattt 4098626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Original strand, 33567247 - 33567280
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    ||||||||||||||| ||||||||||||||||||    
T  33567247 aagttgtcacaaagtggttgtacaaatatcattt 33567280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 4e-59; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 721 - 929
Target Start/End: Complemental strand, 40381802 - 40381594
Alignment:
Q  721 ggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatca 820  Q
    |||| |||||||||||||||||||||||||| ||| || | ||||||||||||||||||||||| ||| |||||| ||||| ||||||| |||||||| |    
T  40381802 ggcccacacatatcatcatatatctcaaattattttttgataatatgaatattatcaagaatcgcatgtgaaatcgaatgagagatgatcggttaaatga 40381703  T
Q  821 ttgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaatta 920  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||| ||||||| ||||||  ||||||| || | ||||||||    
T  40381702 ttgtttagttatttatatagagaaatatatttttattgatattgaaaatgagaaaatctttcaaagtttctataatataaaaaatcgtagaagacaatta 40381603  T
Q  921 ttattgcta 929  Q
    ||| |||||    
T  40381602 ttaatgcta 40381594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 735 - 965
Target Start/End: Original strand, 42163974 - 42164204
Alignment:
Q  735 atcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttattt 834  Q
    |||||||||||| |||| |||||| | ||||||||||||||||||||||  ||  |||||| ||||| |||| || |||||||| |||||||||||||||    
T  42163974 atcatatatctctaattatttcttgataatatgaatattatcaagaatcaaataggaaatcgaatgagagataatcggttaaatgattgtttagttattt 42164073  T
Q  835 atatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaat 934  Q
    |||||||||| |||||||| ||||||||| |||||||| ||||||||| || |||||||||||  ||||||  || | || ||| |||| ||||| |||     
T  42164074 atatagagaaggatatttttattgatattaaaaatgagaaaatcattcaaaatttccataatataaaaaattgtagatgataatcattaatgctacaaaa 42164173  T
Q  935 ttttataaatgtgcaccccactattcaaaaa 965  Q
    ||||||| |||    ||||||||||||||||    
T  42164174 ttttatatatgatacccccactattcaaaaa 42164204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 652 - 853
Target Start/End: Original strand, 14539388 - 14539589
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 751  Q
    |||||||||| ||  ||| |||| ||||| || |||||| || |||||| || ||||||||||||| | |||| |||| ||| ||||||||||||||||     
T  14539388 tagtataatgtacccataattgacattttaattacatggtccacacttaacacaaatcatttctctcttggcccacacctataatcatatatctcaaatc 14539487  T
Q  752 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 851  Q
    ||||||| | | ||||||||||||||| |||| ||||||||||| | ||  ||||||  |||||||| |||||||||||||||||||||| ||| |||||    
T  14539488 ctttcttgatagtatgaatattatcaaaaatcagatgcgaaatcgagtgggagatgaccggttaaatgattgtttagttatttatatagaaaaaaatatt 14539587  T
Q  852 tt 853  Q
    ||    
T  14539588 tt 14539589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 693 - 974
Target Start/End: Complemental strand, 3310775 - 3310494
Alignment:
Q  693 cccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattcttt-cttaaaaatatgaatattatcaagaatcggatgcga 791  Q
    ||||||||||  |||| |||||||||| |||  ||   ||||||||||||||||||||| ||| ||| | | ||||||||||||||||||||||||| ||    
T  3310775 cccacttatccgaaattatttctcttttggctcacgtttatcatcatatatctcaaatttttttcttcatagtatgaatattatcaagaatcggatgaga 3310676  T
Q  792 aatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttcc 891  Q
    | || ||||| |||||   ||||||||  ||||||| |||||| ||||| |||| ||||||| | |||||||||||||||  | || |  | ||||||||    
T  3310675 attcgaatgagagatgtccggttaaatgtttgtttaattatttgtatagtgaaatatatttttaatgatattgaaaatgataagat-aaccaaagtttcc 3310577  T
Q  892 ataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatc 974  Q
    |||||| |||||||  || ||||||||||||| ||||| ||||||| ||| || |||| |||||| |||||||||| |||||||    
T  3310576 ataatatgaaaaatagtagaggacaattattaatgctacaaattttcatatatagtgc-ccccaccattcaaaaattctggatc 3310494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 1796665 - 1796584
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1796665 gagcaatgatatttgaacaaccatttgttacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaatg 1796584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 726 - 941
Target Start/End: Original strand, 37728356 - 37728571
Alignment:
Q  726 acacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtt 825  Q
    |||| ||||||||||||| | ||||  ||| || |  |||||||||| |||||||||  ||||| ||||| | ||  |||||  ||||||||| || |||    
T  37728356 acacctatcatcatatattttaaatcattttttgatgatatgaatatgatcaagaattagatgcaaaatcgagtgtgagatggctggttaaatgatcgtt 37728455  T
Q  826 tagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattatt 925  Q
    ||||||||||||||||||| |||||||| ||||||||||||||| || |||| |||| || |||||||  || | ||||||||| || |||||||||| |    
T  37728456 tagttatttatatagagaatgatatttttattgatattgaaaattagaaaattattcaaattttccatggtacggaaaatcatagagaacaattattaat 37728555  T
Q  926 gctataaatttttata 941  Q
    |||| |||||||||||    
T  37728556 gctacaaatttttata 37728571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 6005127 - 6005045
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  6005127 agagcaatgatgtttgaacaaccatttggtacaacttatttgacaactttccttttctctcttttcattggtcaaaaacaatg 6005045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 482 - 559
Target Start/End: Complemental strand, 5782967 - 5782890
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||||||||    
T  5782967 caatgatatttgaacaaccatttggtacaacctatttgacaactttcattttctctcttttcattgatcaaaaacaat 5782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 36740494 - 36740413
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  36740494 gagcaatgatatttgaacaaccatttgatacaatctatttgacaaccttcattttctctcttttcattgatcaaaaacaatg 36740413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 559
Target Start/End: Original strand, 32725671 - 32725751
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||||||| |||||| |||| ||| || |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32725671 gagcaatgatatttaaacaactatttagtataatctatttgacaaccttccttttctctcttttcattggtcaaaaacaat 32725751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 12045541 - 12045623
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||| | || || ||| |||||||||||||||||||    
T  12045541 agagcaatgatatttgaacaaccatttggtataacctttttgacaaccttcttcttgtctcttctcattggtcaaaaacaatg 12045623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 42443289 - 42443207
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||| |||||||||||  | ||||||||||||| | ||||||||| |||||||||||||||||||    
T  42443289 agagcaatgatatttgaacaactatttggtacaaattttttgacaaccttcttcttctcccttctcattggtcaaaaacaatg 42443207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 44380502 - 44380583
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||| |||||||| |||||| |||| ||||||||| |||||||||||| ||||||||  |||| ||||||||||||||||    
T  44380502 agagcactgatatttaaacaactatttagtacaacctttttgacaacctttcttttctcttttttgattggtcaaaaacaat 44380583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 810 - 882
Target Start/End: Complemental strand, 2537272 - 2537200
Alignment:
Q  810 tggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattc 882  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||  ||| ||||||||||||| |||||||||    
T  2537272 tggttaaattattgtttagttacttatatagagagagatatttttgttggtattgaaaatgagaaaatcattc 2537200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 886 - 976
Target Start/End: Complemental strand, 1336201 - 1336111
Alignment:
Q  886 gtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatccg 976  Q
    |||||||||||| ||| ||||||| |||||||||| || ||||| |||||||||||  | |||| |||||||||||||||||||||||||||    
T  1336201 gtttccataatatgaataatcatagaggacaattactaatgctacaaatttttatatgtagtgc-ccccactattcaaaaatcctggatccg 1336111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 666 - 749
Target Start/End: Complemental strand, 1336363 - 1336280
Alignment:
Q  666 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 749  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| | |||| |||| |||||||||||||||||||    
T  1336363 aatagttgacattttgatcacatgaaccacacttatcacaaaacatttctctcttggcccacacttatcatcatatatctcaaa 1336280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 764 - 919
Target Start/End: Complemental strand, 12585810 - 12585655
Alignment:
Q  764 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatatt 863  Q
    |||||| |||||||||| || | ||||||||  ||||   ||| | ||||||||| ||||| |||||| ||||||||||| ||| ||||| ||||| |||    
T  12585810 tatgaagattatcaagactcagttgcgaaattgaatgggtgatcaatggttaaatgattgtctagttacttatatagagagagagatttttattgagatt 12585711  T
Q  864 gaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaatt 919  Q
    ||||||||| ||||||||| |  |||||| |||| || || || || |||||||||    
T  12585710 gaaaatgagaaaatcattcgatatttccaaaatatgacaagtcgtagaggacaatt 12585655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 478 - 523
Target Start/End: Original strand, 69514 - 69559
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaa 523  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||    
T  69514 agagcaatgctatttgaacaaccatttgatacaacctatttgacaa 69559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 38174136 - 38174219
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| | ||||| | | ||||||||| | || |||| ||  |||||||||||||||||||    
T  38174136 agagcaatgatatttgaacaaccatttgctaacaacttctatgacaacctcctttctctctctcctcattggtcaaaaacaatg 38174219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 485 - 559
Target Start/End: Original strand, 21273605 - 21273679
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||| ||||  |||||| | | ||||||| || |||||||| |||||||||||| |||||||||    
T  21273605 tgatatttgaacaactatttcatacaacttttgtgacaacttttcttttctctcttttcattggttaaaaacaat 21273679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 43605556 - 43605638
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||| |||||||||||||||||| ||| || ||||| | | ||||||||| ||||||||| ||| | ||||||||||||||||    
T  43605556 agagtaatgatatttgaacaaccttttagtgacaacttttgtgacaacctaccttttctctcttcttattggtcaaaaacaat 43605638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 6004977 - 6004944
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||||||||||||||||||||||    
T  6004977 ttgtcacaaagtagttgtacaaatatcatttctc 6004944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 559
Target Start/End: Original strand, 20994950 - 20995027
Alignment:
Q  483 aatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||||||||||| | |||| ||||| | | ||||||||| ||||||||| ||| | ||||||||||||||||    
T  20994950 aatgatatttgaacaaccttctggtgacaacttttgtgacaacctaccttttctctcttcttattggtcaaaaacaat 20995027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 1796532 - 1796496
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1796532 aagttgtcacaaagtggttgtacaaatatcatttctc 1796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 5502407 - 5502371
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  5502407 aagttgtcacaaagtggttgtacaaatatcatttctc 5502371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 480 - 560
Target Start/End: Complemental strand, 9046334 - 9046254
Alignment:
Q  480 agcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||| ||||||| |||||| ||||| |   | ||||||||| ||||||||||| | |||||||| ||||||||    
T  9046334 agcaatgatattggaacaactatttggaacaactttcataacaaccttctttttctcccttcttattggtcagaaacaatg 9046254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 12732878 - 12732842
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  12732878 aagttgtcacaaagtggttgtacaaatatcatttctc 12732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 938
Target Start/End: Complemental strand, 16340319 - 16340198
Alignment:
Q  815 aaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaagga 914  Q
    |||| |||||||||||||||||| ||||| |  | |||| ||||||||||||||| || |||||||||  ||||||| ||||| ||| |||  || | ||    
T  16340319 aaatgattgtttagttatttatacagagata--tttttttattgatattgaaaataagaaaatcattcacagtttccgtaatatgaataattgtagaaga 16340222  T
Q  915 caattattattgctataaattttt 938  Q
    | ||||||| ||||| || |||||    
T  16340221 ctattattaatgctacaatttttt 16340198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 22852874 - 22852910
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  22852874 aagttgtcacaaagtggttgtacaaatatcatttctc 22852910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 28927717 - 28927681
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  28927717 aagttgtcacaaagtggttgtacaaatatcatttctc 28927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 36497697 - 36497661
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  36497697 aagttgtcacaaaatagttgtacaaatatcatttctc 36497661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 45101432 - 45101396
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  45101432 aagttgtcacaaagtggttgtacaaatatcatttctc 45101396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 37524323 - 37524398
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||| | |||||  | ||||| | |||||||||   ||||||| |||||||||||||||||||||||    
T  37524323 tgatatttgaacatctatttgaaataacctttgtgacaacctcttttttctctcttttcattggtcaaaaacaatg 37524398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 40413258 - 40413333
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||| | | ||| ||| |   ||||||| ||||||||| |||||||||||||    
T  40413258 tgatatttgaacaaccatttgatacaacttttatgataacttcttttttctctcttttcattagtcaaaaacaatg 40413333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 9895185 - 9895107
Alignment:
Q  483 aatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||| || |||| |   ||| ||||| ||||||||| |||||||||||| ||||| ||||    
T  9895185 aatgatatttgaacaaccatttgctaacaactttcatgataacctcccttttctctcttttcattggttaaaaataatg 9895107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 6849148 - 6849229
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    |||||||||||||||||||| ||||||  | ||||| | | ||||||| ||| |||||||  |||| |||||||||||||||    
T  6849148 agagcaatgatatttgaacagccattttctaacaacttttatgacaactttctttttctctttttttattggtcaaaaacaa 6849229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 7678910 - 7678833
Alignment:
Q  483 aatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||| ||||| |||||| | | | ||||| |   ||||||| |||||||||||| ||||||||||    
T  7678910 aatgatatttgaacaactatttgatacaacttttgtaacaacttcttttttctctcttttcattggttaaaaacaatg 7678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Complemental strand, 11138943 - 11138910
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    ||||||||||||| ||||||||||||||||||||    
T  11138943 aagttgtcacaaaatagttgtacaaatatcattt 11138910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Complemental strand, 27836216 - 27836183
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    ||||||||||||||| ||||||||||||||||||    
T  27836216 aagttgtcacaaagtggttgtacaaatatcattt 27836183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 39359879 - 39359838
Alignment:
Q  518 tgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||| |||||||||||| | ||||||||||||||||    
T  39359879 tgacaaccttacttttctcccttcttattggtcaaaaacaat 39359838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 42047368 - 42047335
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||| ||||||||||||||||||||||||||||    
T  42047368 ttgtcccaaagtagttgtacaaatatcatttctc 42047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 43419912 - 43419879
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||| |||||||||||||||||||||||    
T  43419912 ttgtcacaaattagttgtacaaatatcatttctc 43419879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 2e-55; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 703 - 933
Target Start/End: Complemental strand, 30294321 - 30294091
Alignment:
Q  703 ataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaa 802  Q
    |||||| |||||||||| |  |||||||||||||||||||||| |||||||||||| | | |||||||||||||||||||| ||||||||||| |||||     
T  30294321 ataaattatttctcttttgatctacacatatcatcatatatcttaaattctttcttgatagtatgaatattatcaagaatctgatgcgaaatcgaatgag 30294222  T
Q  803 agatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaa 902  Q
    ||||||| |||||||  |||||||||||||||||||| | ||||||||||| |||||| || ||||| || ||| ||||| |||||||||||||| ||||    
T  30294221 agatgatcggttaaaagattgtttagttatttatataaaaaaagatatttttattgattttcaaaataagaaaaccattcaaagtttccataatatgaaa 30294122  T
Q  903 aatcataaaggacaattattattgctataaa 933  Q
    |||  || | ||||||||||| || ||||||    
T  30294121 aattgtagaagacaattattaatgttataaa 30294091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 666 - 976
Target Start/End: Complemental strand, 27850707 - 27850396
Alignment:
Q  666 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattcttt-cttaaaaat 764  Q
    ||||||| ||||||||| ||||||  || |||||||||||||| |||||||||| |||| |||| |||||| |||||| ||||||| ||| ||| | |||    
T  27850707 aatagtttatattttgaccacatgtaccacacttatcataaattatttctcttttggcccacacttatcattatatatatcaaatttttttcttgataat 27850608  T
Q  765 atgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattg 864  Q
    |||||||||||||||||| |||||| ||| | |||  || |||||  ||||||| ||||||||||||||||||||| |||||| ||||| ||| ||||||    
T  27850607 atgaatattatcaagaattggatgcaaaagcgaatataatatgatcagttaaatgattgtttagttatttatatagtgaaagacatttttattaatattg 27850508  T
Q  865 aaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaatg-tgcaccccactattcaaa 963  Q
    |||||||  | ||||||| |||||||||||| | ||||||| ||| |||| |||||||| | ||| ||||||| ||| ||| ||| || || ||||||||    
T  27850507 aaaatgataatatcattcaaagtttccataaaatgaaaaattatagaggagaattattaatactacaaattttcatatatgatgc-cctcattattcaaa 27850409  T
Q  964 aatcctggatccg 976  Q
    |||| ||||||||    
T  27850408 aatcttggatccg 27850396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 656 - 865
Target Start/End: Original strand, 21487306 - 21487509
Alignment:
Q  656 ataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattcttt 755  Q
    ||||||||| || |||||||||||||| ||||||| || ||||| ||| ||||||||||||||| || | ||||||||||||| ||||||||||||||||    
T  21487306 ataatgcaccaa-agttgatattttgaccacatggtccacacttctcacaaatcatttctcttttggtccacacatatcatca-atatctcaaattcttt 21487403  T
Q  756 cttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagata-ttttc 854  Q
     || | ||||||||||||||     ||| ||||  ||||||||||| |||||||  ||||||| |||||||| ||||||||||||| ||| ||| ||||     
T  21487404 tttgataatatgaatattat-----atcagatgtaaaatcaaatgagagatgatcagttaaatgattgtttaattatttatatagataaaaatatttttt 21487498  T
Q  855 attgatattga 865  Q
    |||||||||||    
T  21487499 attgatattga 21487509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 48872562 - 48872480
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48872562 agagcaatgatatttgaacaaccatttgatacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaatg 48872480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 27352813 - 27352731
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||    
T  27352813 agagcaatgatatttgaacaaccatttggtacaacctattcgacaacctttcttttctctcttttcattggtcaaaaacaatg 27352731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 51339590 - 51339670
Alignment:
Q  480 agcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  51339590 agcaatgatatttgaacaactatttggtacaacctatttgacaaccttcattttctctcttttcattggtcaaaaacaatg 51339670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 4604711 - 4604630
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||    
T  4604711 gagcaatgatatttgaacaacgatttggtacaacctgtttgacaaccttctttttctctcttttcattggtcaaaaacaatg 4604630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 487 - 560
Target Start/End: Original strand, 30530471 - 30530544
Alignment:
Q  487 atatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  30530471 atatttgaacaaccatttggtacaacctatttgacaactttccttttctctcttttcattggtcaaaaacaatg 30530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 25061916 - 25061834
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  25061916 agagcaatgatatttgaacaaccatttgatacaatctatttgacaaccttctttttctctcttttcattggttaaaaacaatg 25061834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 36930644 - 36930726
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||| |||||||||||||||||    
T  36930644 agagcaatgatatttgaacaaccattttgtacaacctttttgacaaccttctttttctctctttttattggtcaaaaacaatg 36930726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 49621544 - 49621462
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||| |||||||||||||||||    
T  49621544 agagcaatgatatttgaacaaccatttggtacaatctatttgacaatcttcattttctctctttttattggtcaaaaacaatg 49621462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 50527945 - 50528027
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  50527945 agagcaatcatatttgaacaaccatttgctacaatctatttgacaaccttctttttctctcttttcattggtcaaaaacaatg 50528027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 43611971 - 43612052
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||| ||||||||||||||||||||||||| || |||||| ||||| |||||||||||||||||||||||    
T  43611971 gagcaatgatatttgaccaaccatttggtacaacctatttgataatcttcctcttctctcttttcattggtcaaaaacaatg 43612052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 482 - 560
Target Start/End: Original strand, 25098683 - 25098758
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||||||||||||    
T  25098683 caatgatatttgaacaaccatttggtacaacct---tgacaaccttccttttctctcttttcattggtcaaaaacaatg 25098758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 478 - 558
Target Start/End: Complemental strand, 44730827 - 44730747
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||| ||||||||    
T  44730827 agagcaatgatatttgaacaaccatttggtacaacctttttgacaaccttctttttctcttttttcattggttaaaaacaa 44730747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 16658626 - 16658540
Alignment:
Q  478 agagcaatgatatttgaacaacca----tttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||    
T  16658626 agagcaatgatatttgaacaaccaattatttggtacaacctatttgacaaccttccttttctctttttttattggtcaaaaacaatg 16658540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 803 - 910
Target Start/End: Complemental strand, 37245022 - 37244915
Alignment:
Q  803 agatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattctaagtttccataataggaaa 902  Q
    |||||||| ||||||| |||||||| |||||||||| |||||  ||||||| |||||||| ||||||| | ||||||||| |||||| ||||| | ||||    
T  37245022 agatgattcgttaaatgattgtttaattatttatattgagaacaatatttttattgatatcgaaaatgtgaaaatcattcaaagttttcataaaatgaaa 37244923  T
Q  903 aatcataa 910  Q
    ||||||||    
T  37244922 aatcataa 37244915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 30687235 - 30687153
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||||||| | ||||||||| |||||| | ||||||||||    
T  30687235 agagcaatgatatttgaacaaccatttggtacaaattttttgacaaccttcttcttctcccttctcattgtttaaaaacaatg 30687153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 32821814 - 32821736
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||| || ||| ||||||||||| ||| ||||||| |||||||||||| ||||||||||    
T  32821814 caatgatatttgaacaaccatttgataaaacttatttgacaacattcattttctctcttttcattggtaaaaaacaatg 32821736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 40595942 - 40596024
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||   |  ||||||| |||||||||||||||||||||||    
T  40595942 agagcaatgatatttgaacaaccatttgatacaacctttttgacaataatttttttctctcttttcattggtcaaaaacaatg 40596024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 51172195 - 51172277
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||  | || |||||||||||||||||    
T  51172195 agagcaatgatatttgaacaatcatttggtacaatctatttgacaatctttcttttctctttgtttattggtcaaaaacaatg 51172277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 652 - 749
Target Start/End: Original strand, 46396444 - 46396541
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 749  Q
    |||||||||| |  ||||||||| |||||||||||||||  | ||||||||| ||||||||||||| | |||| |||| |||||||||||||||||||    
T  46396444 tagtataatgtatcaatagttgacattttgatcacatggatcacacttatcagaaatcatttctctcttggcccacacttatcatcatatatctcaaa 46396541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 768 - 839
Target Start/End: Complemental strand, 5200404 - 5200333
Alignment:
Q  768 aatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatata 839  Q
    ||||||||||||||||  ||| |||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  5200404 aatattatcaagaatcaaatgtgaaatcaaatgagagatgattgattaaataattgtttagttatttatata 5200333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 652 - 755
Target Start/End: Complemental strand, 42773473 - 42773370
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 751  Q
    |||||||||| || ||||||||||||||||| ||||| |||  | ||| | | ||||||||||||||| |||  ||||||||||||||||| ||||||||    
T  42773473 tagtataatgtaccaatagttgatattttgaccacatagcctactcttcttacaaatcatttctcttttggcacacacatatcatcatataactcaaatt 42773374  T
Q  752 cttt 755  Q
    ||||    
T  42773373 cttt 42773370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 879 - 976
Target Start/End: Original strand, 46396620 - 46396717
Alignment:
Q  879 attctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatccg 976  Q
    |||| ||||||| |||||| ||| |||| || ||||||||||||| ||||| ||||||||||| || |||| |||||||||||||||||||||||||||    
T  46396620 attcaaagtttcaataatatgaataatcgtagaggacaattattaatgctacaaatttttatatatagtgc-ccccactattcaaaaatcctggatccg 46396717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 21255672 - 21255755
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| | ||||| | | ||||||||| | ||||||| ||| |||||||||||||||||||    
T  21255672 agagcaatgatatttgaacaaccatttgctaacaacttttatgacaacctcctttttctctcttctcattggtcaaaaacaatg 21255755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 16987630 - 16987548
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||| || |||  | | ||||||||| | ||||||| |||||||||||||||||||||||    
T  16987630 gagcaatgatatttgaacaaccatttgctaacaatttctatgacaacctcctttttctctcttttcattggtcaaaaacaatg 16987548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 876 - 976
Target Start/End: Complemental strand, 1282277 - 1282177
Alignment:
Q  876 atcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatc 974  Q
    ||||||| |||||||||||||| ||| |||  || | ||||||||||| ||||| | ||||||||| || |||| |||||||||||||||||||||||||    
T  1282277 atcattcaaagtttccataatatgaataattgtagatgacaattattaatgctacagatttttatatatagtgc-ccccactattcaaaaatcctggatc 1282179  T
Q  975 cg 976  Q
    ||    
T  1282178 cg 1282177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 876 - 976
Target Start/End: Complemental strand, 1283308 - 1283208
Alignment:
Q  876 atcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatc 974  Q
    ||||||| |||||||||||||| ||| |||  || | ||||||||||| ||||| | ||||||||| || |||| |||||||||||||||||||||||||    
T  1283308 atcattcaaagtttccataatatgaataattgtagatgacaattattaatgctacagatttttatatatagtgc-ccccactattcaaaaatcctggatc 1283210  T
Q  975 cg 976  Q
    ||    
T  1283209 cg 1283208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 554
Target Start/End: Original strand, 40605308 - 40605385
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaa 554  Q
    |||||||||||||||||||||||||||| | ||||| | | ||||||||||| ||||||| ||| |||||||||||||    
T  40605308 agagcaatgatatttgaacaaccatttgctaacaacttttatgacaaccttctttttctctcttctcattggtcaaaa 40605385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 11460977 - 11460895
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||| ||||||||||||||||| ||||| |||||| | ||||||||||||| || |||  ||||| |||||||||||| ||||    
T  11460977 agaggaatgatatttgaacaacaatttgatacaacttttttgacaaccttctttctctttctttttattggtcaaaaataatg 11460895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 755
Target Start/End: Complemental strand, 37245128 - 37245038
Alignment:
Q  666 aatagttgatattttgatcacatggcccccacttatcataaatcatttctct-ttcggcctacacatatcatcatatatctcaaattcttt 755  Q
    |||| |||| ||||||||||||||  || ||||||||||||||||||||||| || | || ||| |||| |||||||||||||||| ||||    
T  37245128 aatatttgacattttgatcacatgatccacacttatcataaatcatttctctcttagccccacatatataatcatatatctcaaatacttt 37245038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 43640875 - 43640957
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||| | ||||| |   |||||||||   ||||||| |||||||||||||||||||||||    
T  43640875 gagcaatgatatttgaacaaccatttgctaacaactttcatgacaacctcatttttctctcttttcattggtcaaaaacaatg 43640957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 47059778 - 47059860
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||| | ||||| |   |||||| |||  ||||||| |||||||||||||||||||||||    
T  47059778 gagcaatgatatttgaacaaccatttgctaacaactttcatgacaatcttatttttctctcttttcattggtcaaaaacaatg 47059860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 523
Target Start/End: Complemental strand, 5043226 - 5043186
Alignment:
Q  483 aatgatatttgaacaaccatttggtacaacctatttgacaa 523  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  5043226 aatgatatttgaacaaccatttggtacaacttatttgacaa 5043186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 822 - 882
Target Start/End: Original strand, 29095842 - 29095902
Alignment:
Q  822 tgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcattc 882  Q
    |||||||||| ||| |||||||||||| |||| ||||| |||||||||||| |||||||||    
T  29095842 tgtttagttacttacatagagaaagatgtttttattgagattgaaaatgagaaaatcattc 29095902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 42299075 - 42299158
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctattt-gacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||  |||| ||||||| | ||| ||||| |||| ||||||| ||||| |||||||||||| ||||    
T  42299075 agagcaatgatatttgaacaattatttagtacaacattttttgacaatcttctttttctctctttttattggtcaaaaataatg 42299158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 607 - 641
Target Start/End: Complemental strand, 10384245 - 10384211
Alignment:
Q  607 gttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||||||||||||||||||||||||    
T  10384245 gttgtcacaaagtagttgtacaaatatcatttctc 10384211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 852
Target Start/End: Complemental strand, 42772377 - 42772340
Alignment:
Q  815 aaatcattgtttagttatttatatagagaaagatattt 852  Q
    |||| |||||||||||||||||||||||||||||||||    
T  42772377 aaatgattgtttagttatttatatagagaaagatattt 42772340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 5309075 - 5309111
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  5309075 aagttgtcacaaagtggttgtacaaatatcatttctc 5309111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 6829818 - 6829854
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  6829818 aagttgtcacaaattagttgtacaaatatcatttctc 6829854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 7503506 - 7503470
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7503506 aagttgtcacaaagtagttggacaaatatcatttctc 7503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 8391362 - 8391398
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||| |||||||||||||||||||||||||||||||    
T  8391362 aagttctcacaaagtagttgtacaaatatcatttctc 8391398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 18610809 - 18610773
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  18610809 aagttgtcacaaaatagttgtacaaatatcatttctc 18610773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 29293995 - 29293959
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||| |||||||||||||||||||||||||||    
T  29293995 aagttgtcataaagtagttgtacaaatatcatttctc 29293959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 29294124 - 29294055
Alignment:
Q  483 aatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaa 554  Q
    ||||||||||||||||| || ||| ||||| ||| ||||||  || |||||||| |||||||||||||||||    
T  29294124 aatgatatttgaacaactatgtggaacaacttatgtgacaa--tttcttttctctcttttcattggtcaaaa 29294055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 32821671 - 32821635
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  32821671 aagttgtcacaaagtggttgtacaaatatcatttctc 32821635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 37843467 - 37843503
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||| |||||||||||||||||||||||||||    
T  37843467 aagttgtcaaaaagtagttgtacaaatatcatttctc 37843503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 558
Target Start/End: Original strand, 45349989 - 45350065
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    |||||| |||| ||||| |||||||||||| || |||||||| |||  || |||| ||||||||||||| |||||||    
T  45349989 caatgacattttaacaatcatttggtacaatctttttgacaatcttttttctctctcttttcattggtcgaaaacaa 45350065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 45740579 - 45740615
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  45740579 aagttgtcacaaagtggttgtacaaatatcatttctc 45740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 49425774 - 49425738
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  49425774 aagttgtcacaaagtggttgtacaaatatcatttctc 49425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 49453527 - 49453491
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  49453527 aagttgtcacaaagtggttgtacaaatatcatttctc 49453491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 50226914 - 50226950
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  50226914 aagttgtcacaaagtggttgtacaaatatcatttctc 50226950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 514
Target Start/End: Complemental strand, 51571697 - 51571665
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacct 514  Q
    |||||||||||||||||||||||||||||||||    
T  51571697 caatgatatttgaacaaccatttggtacaacct 51571665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 23554935 - 23554852
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| | ||||| |   |||||||||   ||||||| | |||||||||| ||||||||||    
T  23554935 agagcaatgatatttgaacaaccatttgctaacaactttcatgacaacctcatttttctctcctttcattggttaaaaacaatg 23554852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 25239124 - 25239207
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaac-cttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||| ||| |||||||||| | ||| |||  ||  ||||||| ||| | |||||||||||||||||    
T  25239124 agagcaatgatatttgaacaactattgggtacaacctttatgataacttttttttttctctcttcttattggtcaaaaacaatg 25239207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 31244622 - 31244705
Alignment:
Q  478 agagcaatgatatttgaacaacca-tttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||| | ||||||||||| | |  ||||||| |  | ||||| ||| |||||||||||||||||||    
T  31244622 agagcaatgatatttgaacaactattttggtacaacatttgggacaaccatgttgttctctcttctcattggtcaaaaacaatg 31244705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 34187440 - 34187365
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||| ||  ||||  ||| ||||||| |  |||||||| ||||||||||||||||| |||||    
T  34187440 tgatatttgaacaaccatgtgagacaatttatgtgacaacttctcttttctctcttttcattggtcaaaatcaatg 34187365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 830
Target Start/End: Complemental strand, 42772459 - 42772392
Alignment:
Q  763 atatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagtt 830  Q
    ||||||||||||||||||||||||  || |||| ||||| |||||||   |||||| |||||||||||    
T  42772459 atatgaatattatcaagaatcggacacggaatcgaatgagagatgatcaattaaatgattgtttagtt 42772392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 48325406 - 48325323
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||| |||||||| |||||||||||| || |||| |   ||||||||| | ||||||| ||| |||||||||||||||||||    
T  48325406 agagcagtgatattttaacaaccatttgctaacaacttcaatgacaacctcctttttctctcttctcattggtcaaaaacaatg 48325323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 366840 - 366758
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||| |||| ||||||||||||||  ||  ||||| ||| ||||||| ||  ||| ||| |||||||||||||||||||||||    
T  366840 agagtaatgttatttgaacaaccaaatgagacaacttatgtgacaacttttttttcctctcttttcattggtcaaaaacaatg 366758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 607 - 641
Target Start/End: Original strand, 25302680 - 25302714
Alignment:
Q  607 gttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||    
T  25302680 gttgtcacaaagtggttgtacaaatatcatttctc 25302714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 32966450 - 32966368
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| ||||  || |||| | | |||||||||   ||||||| ||||| |||||||||||||||||    
T  32966450 gagcaatgatatttgaacaactatttactaacaacttttgtgacaacctcatttttctctctttttattggtcaaaaacaatg 32966368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 38019391 - 38019472
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||| |||||||||||||||||||||||||||  |   ||||||||||| |||||||  || | |||||||||||| ||||    
T  38019391 agagcagtgatatttgaacaaccatttggtacaa-tttgatgacaaccttctttttctcttttgttattggtcaaaaataatg 38019472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 482 - 520
Target Start/End: Complemental strand, 44959112 - 44959074
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacctatttga 520  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  44959112 caatgatatttgaacaaccatttgatacaacttatttga 44959074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 770 - 843
Target Start/End: Complemental strand, 1282354 - 1282281
Alignment:
Q  770 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagaga 843  Q
    |||||| ||||||  ||||||||||||| |    ||||| ||||||||| ||||||||||||||| ||||||||    
T  1282354 tattattaagaattagatgcgaaatcaagtaggggatgactggttaaatgattgtttagttatttttatagaga 1282281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 652 - 749
Target Start/End: Complemental strand, 1282452 - 1282356
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 749  Q
    |||||||||| | |||||||||| |||| |||||||||   | ||||||||| ||||||||||| | | |||| |||| | || ||||||||||||||    
T  1282452 tagtataatgtattaatagttgacattt-gatcacatgaatcacacttatcacaaatcatttctatcttggcccacacttgtcgtcatatatctcaaa 1282356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 770 - 843
Target Start/End: Complemental strand, 1283385 - 1283312
Alignment:
Q  770 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagaga 843  Q
    |||||| ||||||  ||||||||||||| |    ||||| ||||||||| ||||||||||||||| ||||||||    
T  1283385 tattattaagaattagatgcgaaatcaagtaggggatgactggttaaatgattgtttagttatttttatagaga 1283312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 652 - 749
Target Start/End: Complemental strand, 1283483 - 1283387
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 749  Q
    |||||||||| | |||||||||| |||| |||||||||   | ||||||||| ||||||||||| | | |||| |||| | || ||||||||||||||    
T  1283483 tagtataatgtattaatagttgacattt-gatcacatgaatcacacttatcacaaatcatttctatcttggcccacacttgtcgtcatatatctcaaa 1283387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 4511665 - 4511746
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||| |||||||| || |||||||||||| ||||| ||  ||||||| ||| |||| || ||| ||||||||| ||||||||    
T  4511665 agagtaatgatatatgtacaaccatttgggacaacttagatgacaactttcattttttctcttctcattggtccaaaacaat 4511746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Original strand, 5477187 - 5477220
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    ||||||||||||||| ||||||||||||||||||    
T  5477187 aagttgtcacaaagtggttgtacaaatatcattt 5477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 607 - 640
Target Start/End: Original strand, 9882696 - 9882729
Alignment:
Q  607 gttgtcacaaagtagttgtacaaatatcatttct 640  Q
    ||||||||||| ||||||||||||||||||||||    
T  9882696 gttgtcacaaaatagttgtacaaatatcatttct 9882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 478 - 558
Target Start/End: Original strand, 29253953 - 29254034
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    |||||||||||||||||||||| ||||| | ||||| |   ||||||||| | ||||||| ||| |||||| ||||||||||    
T  29253953 agagcaatgatatttgaacaactatttgctaacaacttcaatgacaacctcctttttctctcttctcattgatcaaaaacaa 29254034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Original strand, 31427995 - 31428028
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  31427995 ttgtcacaaagtggttgtacaaatatcatttctc 31428028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 50659090 - 50659162
Alignment:
Q  488 tatttgaacaaccatttggtacaacctatttgacaaccttccttt-tctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| ||  ||||| ||| ||||||| ||| ||| |||| |||||||||||||||||||||||    
T  50659090 tatttgaacaaccatatgaaacaacttatgtgacaac-ttcttttctctctcttttcattggtcaaaaacaatg 50659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 6e-52; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 652 - 969
Target Start/End: Original strand, 23756472 - 23756791
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 751  Q
    |||||||||| || ||  ||||| |||||||| | ||||||| ||||||  | ||||||||||||||| |||   ||| |||||||||||||||||||||    
T  23756472 tagtataatgtaccaaccgttgacattttgatgagatggcccacacttaatacaaatcatttctcttttggcacgcacctatcatcatatatctcaaatt 23756571  T
Q  752 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 851  Q
    ||||||| | |||| ||||||||||||||||| ||||||||||  | ||  |||| | ||||||| | || |||||||| |||||||||| ||| |||||    
T  23756572 ctttcttgataatacgaatattatcaagaatcagatgcgaaatttagtgggagattactggttaagtgatcgtttagttgtttatatagaaaaatatatt 23756671  T
Q  852 ttcattgata-ttgaaaatgagcaaatcattctaagtttccataataggaaaaatc-ataaaggacaattattattgctataaatttttataaat-gtgc 948  Q
    || ||||||| ||||||||||| ||||||||| ||||||||||||||  ||||||| || |  ||||||||||| ||||| || |||||||| || ||||    
T  23756672 tttattgatatttgaaaatgagaaaatcattcaaagtttccataatataaaaaatcaattagagacaattattaatgctacaactttttatatatggtgc 23756771  T
Q  949 accccactattcaaaaatcct 969  Q
     |||||||||||||| |||||    
T  23756772 -ccccactattcaaatatcct 23756791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 18157074 - 18157155
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18157074 gagcaatgatatttgaacaactatttggtacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaatg 18157155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 481 - 560
Target Start/End: Complemental strand, 43107792 - 43107713
Alignment:
Q  481 gcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  43107792 gcaatgatatttgaacaaccatttggtacaacctatttaacaaccttccttttctttcttttcattggtcaaaaacaatg 43107713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 2469875 - 2469793
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||    
T  2469875 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctctattttcattggtaaaaaataatg 2469793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 25940555 - 25940636
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  25940555 agagcaatgatatttgaacaactatttggtacaatctatttgacaaccttcattttctctcttttcattggtcaaaaacaat 25940636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 9031390 - 9031308
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  9031390 agagcaatgatatttgaacaaccatttggtacaatctatttgacaaccttcattttctctctttttattggtcaaaaataatg 9031308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 27688819 - 27688738
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  27688819 gagcaatgatatttgtacaattatttggtacaatctatttgacaaccttccttttctctcttttcattggtcaaaaacaatg 27688738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 30941359 - 30941278
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    
T  30941359 gagcaatcatatttgaacaaccatttagtacaacctatttgacaaccttccttttctcttttttcattggttaaaaacaatg 30941278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 491 - 560
Target Start/End: Complemental strand, 43444798 - 43444729
Alignment:
Q  491 ttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  43444798 ttgaacaaccatttggtacaacctatttgacaaccttcattttctcccttttcattggtaaaaaacaatg 43444729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 43079517 - 43079602
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttt---tcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||   |||||||||||||||||||    
T  43079517 agagcaatgatatttgaacaaccatttggtaaaacttatttgacaacctttcttttctctcttttcatcattggtcaaaaacaatg 43079602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 6655505 - 6655587
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| |||||||||||||||||| || |||||||| |||| |||| || |||||||||||| ||||||||||    
T  6655505 agagcaatgatatttaaacaaccatttggtacaatctttttgacaatcttctttttatctcttttcattggttaaaaacaatg 6655587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 35098475 - 35098557
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||| |||| ||||||| ||| |||||||| ||||||||||    
T  35098475 agagcaatgataattgaacaactatttggtacaacctttttgacaatcttcattttctctcttctcattggtaaaaaacaatg 35098557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 478 - 555
Target Start/End: Original strand, 35072133 - 35072210
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaa 555  Q
    |||||||||||||||||||||| |||||||||||||| |||||||| |||| ||||||| ||| |||||||| |||||    
T  35072133 agagcaatgatatttgaacaactatttggtacaacctttttgacaatcttcattttctctcttctcattggtaaaaaa 35072210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 764 - 919
Target Start/End: Original strand, 22972847 - 22973002
Alignment:
Q  764 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatatt 863  Q
    |||||| |||||||||| || | ||||||||| ||||   ||| | ||||||||| ||||| |||||| ||||||| ||| ||| ||||| ||||| |||    
T  22972847 tatgaagattatcaagactcagttgcgaaatcgaatgggtgatcaatggttaaatgattgtctagttacttatatatagagagagatttttattgagatt 22972946  T
Q  864 gaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaatt 919  Q
    ||||||||| ||||||||| |  |||||| |||| || || || || |||||||||    
T  22972947 gaaaatgagaaaatcattcgatatttccaaaatatgacaagtcgtagaggacaatt 22973002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 765 - 882
Target Start/End: Original strand, 33758395 - 33758512
Alignment:
Q  765 atgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattg 864  Q
    |||| ||||||||||||||||||| |||||   ||||| ||| | || |||||| |||||||  ||| |||||| ||||| |||||||| ||||| ||||    
T  33758395 atgagtattatcaagaatcggatgtgaaattggatgaaggataaatgattaaataattgtttgattacttatattgagaatgatatttttattgacattg 33758494  T
Q  865 aaaatgagcaaatcattc 882  Q
    |||||||| |||| ||||    
T  33758495 aaaatgagaaaattattc 33758512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 485 - 559
Target Start/End: Complemental strand, 12142060 - 12141986
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||||||||| |||||| | | ||||||| ||  ||||||  ||||||||||||||||||||||    
T  12142060 tgatatttgaacaaccatttgatacaacttttgtgacaactttttttttctttcttttcattggtcaaaaacaat 12141986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 506 - 560
Target Start/End: Complemental strand, 29034240 - 29034186
Alignment:
Q  506 gtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||| |||||||| |||| ||||||| |||||||||||||||||||||||    
T  29034240 gtacaacctttttgacaatcttctttttctctcttttcattggtcaaaaacaatg 29034186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 40693415 - 40693497
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||||||||||||| || || |||| | | ||||||||| | ||||||| ||| ||||||||||||||||||    
T  40693415 agagcaatgatatttgaacaaccatgtgctaacaacttctatgacaacctcctttttctctcttctcattggtcaaaaacaat 40693497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 21588816 - 21588897
Alignment:
Q  480 agcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||| || || |||| | | ||||||||| | ||||||| ||| |||||||||||||||||||    
T  21588816 agcaatgatatttgaacaaccatgtgctaacaacttctatgacaacctcctttttctctcttctcattggtcaaaaacaatg 21588897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 8792488 - 8792567
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||| ||||||||||||||||||||||| |||||| | | ||||||| |   ||||||| ||||||||| |||||||||||||    
T  8792488 agagtaatgatatttgaacaaccatttgatacaacttttgtgacaactt---ttttctctcttttcattagtcaaaaacaatg 8792567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 4678247 - 4678164
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| |||||||||||| || |||| |   ||||||||| | |||||||  ||||||||||||||||||||||    
T  4678247 agagcaatgatatttaaacaaccatttgctaacaactttgatgacaacctcctttttctctattttcattggtcaaaaacaatg 4678164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 37392227 - 37392144
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| | ||||| |   |||||||||   ||||||| |||||||||||| ||||||||||    
T  37392227 agagcaatgatatttgaacaaccatttgctaacaactttcatgacaacctcatttttctctcttttcattggttaaaaacaatg 37392144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 38023314 - 38023396
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||| |||||||||||||| | ||||| |||||  |||||||||| ||| ||||| ||  |||| |||||||||||||||||    
T  38023314 agagctatgatatttgaacagctatttgatacaatttatttgacaatctttcttttatctatttttattggtcaaaaacaatg 38023396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 2469739 - 2469703
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  2469739 aagttgtcacaaagtggttgtacaaatatcatttctc 2469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 22330655 - 22330691
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  22330655 aagttgtcacaaagtggttgtacaaatatcatttctc 22330691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 609 - 641
Target Start/End: Complemental strand, 27778111 - 27778079
Alignment:
Q  609 tgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||||||||||||||||||||||    
T  27778111 tgtcacaaagtagttgtacaaatatcatttctc 27778079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 37352014 - 37352050
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37352014 aagttgtcacaaagtggttgtacaaatatcatttctc 37352050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 41077535 - 41077571
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||||||||||| ||||||||||||||    
T  41077535 aagttgtcacaaagtagttgtaaaaatatcatttctc 41077571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 45607060 - 45607024
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45607060 aagttgtcacaaagtagatgtacaaatatcatttctc 45607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 5978755 - 5978680
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||| || ||||||   | ||||||| |   ||||||| |||||||||||||||||||||||    
T  5978755 tgatatttgaacaaccatatgatacaactcttgtgacaacttctattttctctcttttcattggtcaaaaacaatg 5978680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 641
Target Start/End: Complemental strand, 37832485 - 37832450
Alignment:
Q  606 agttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||||    
T  37832485 agttgtcacaaaatagttgtacaaatatcatttctc 37832450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 40077435 - 40077356
Alignment:
Q  482 caatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||| | ||||| | | ||||||||| | ||||||  ||| | |||||||||||||||||    
T  40077435 caatgatatttgaacaaccatttgttaacaacttttatgacaacctcctttttctttcttcttattggtcaaaaacaatg 40077356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 512
Target Start/End: Original strand, 8061634 - 8061668
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaac 512  Q
    |||||||| ||||||||||||||||||||||||||    
T  8061634 agagcaataatatttgaacaaccatttggtacaac 8061668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 559
Target Start/End: Original strand, 10591035 - 10591117
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||||||||||||||| ||||||| ||||| | | ||||||||  |||||||||  || | |||| |||||||||||    
T  10591035 agagcaatgatatttgaacaactatttggtgacaacttttatgacaacccaccttttctctattcttattgatcaaaaacaat 10591117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 639
Target Start/End: Complemental strand, 28596942 - 28596908
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttc 639  Q
    ||||||||||||||| |||||||||||||||||||    
T  28596942 aagttgtcacaaagtggttgtacaaatatcatttc 28596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 605 - 639
Target Start/End: Original strand, 32154571 - 32154605
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttc 639  Q
    |||||||||||| ||||||||||||||||||||||    
T  32154571 aagttgtcacaacgtagttgtacaaatatcatttc 32154605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 663 - 717
Target Start/End: Original strand, 46232378 - 46232432
Alignment:
Q  663 actaatagttgatattttgatcacatggcccccacttatcataaatcatttctct 717  Q
    |||||||||||| |||||||  ||||| ||| ||||||||| |||||||||||||    
T  46232378 actaatagttgacattttgactacatgacccacacttatcacaaatcatttctct 46232432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Original strand, 23680062 - 23680095
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    ||||||||||||| ||||||||||||||||||||    
T  23680062 aagttgtcacaaaatagttgtacaaatatcattt 23680095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 31982090 - 31982057
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  31982090 ttgtcacaaagtggttgtacaaatatcatttctc 31982057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 41966365 - 41966332
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  41966365 ttgtcacaaagtggttgtacaaatatcatttctc 41966332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 2e-36; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 46567112 - 46567030
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46567112 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctctcttttcattggtcaaaaacaatg 46567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 652 - 871
Target Start/End: Complemental strand, 13035747 - 13035532
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 751  Q
    |||||||||| |  ||||||||| ||||||| |||| | ||| ||||||||| ||||||||| ||| | |||| |||| ||| ||||||||| | ||||     
T  13035747 tagtataatgtaggaatagttgacattttgaccacaagacccacacttatcacaaatcatttatctcttggcccacacctataatcatatatatgaaatc 13035648  T
Q  752 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 851  Q
    ||||||| | |||||||||||||||||||||||||||  ||||| | ||  ||||||  |||||||| |||||    ||||||||||||||||| |||||    
T  13035647 ctttcttgataatatgaatattatcaagaatcggatgtcaaatcgagtgggagatgaccggttaaataattgt----ttatttatatagagaaaaatatt 13035552  T
Q  852 ttcattgatattgaaaatga 871  Q
    || |||||||| ||||||||    
T  13035551 tttattgatatcgaaaatga 13035532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 666 - 941
Target Start/End: Original strand, 22087635 - 22087913
Alignment:
Q  666 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaata 765  Q
    ||||||||| ||||||| |||||| ||| ||||||||| | ||||||||||||| |||  |||| ||| || ||||||||||| |  |||||| | ||||    
T  22087635 aatagttgacattttgaccacatgacccacacttatcacatatcatttctcttttggctcacacctataattatatatctcaagtcatttcttgataata 22087734  T
Q  766 tgaatattatcaagaatcggatgcgaa-----atcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgat 860  Q
    ||||||||||||||||| | |||| ||     ||  | ||  |||| || |||||||| | |||||| ||| | || || | ||| ||||||| ||||||    
T  22087735 tgaatattatcaagaatagaatgcaaatcgatattgagtgggagataatcggttaaatgactgtttaattaat-atttatataaa-atatttttattgat 22087832  T
Q  861 attgaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttata 941  Q
    |||||||||| | ||||||||| |||||| ||||||| ||||||||||| |||| ||||||||||| || |||||||||||    
T  22087833 attgaaaatgcgaaaatcattcaaagttttcataatatgaaaaatcatagaggataattattattgttacaaatttttata 22087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 12639007 - 12638925
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  12639007 agagaaatgatatttgaacaactatttgttacaacctatttgacaaccttcattttctctcttttcattggtcaaaaacaatg 12638925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 28676043 - 28676124
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||    
T  28676043 gagcaatgatatttaaacaaccattttgtacaacctttttgacaaccttctttttctctcttttcattggtcaaaaacaatg 28676124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 770 - 975
Target Start/End: Original strand, 47551993 - 47552200
Alignment:
Q  770 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatat--tttcattgatattgaaa 867  Q
    |||||| || ||| |||| ||||||||| |   |||||| || |||||| |||||||||||||| ||| |||||||  | |  ||| |||||||||||||    
T  47551993 tattatgaaaaattggatacgaaatcaagtcggagatgactgattaaatgattgtttagttattcatacagagaaaagtttctttttattgatattgaaa 47552092  T
Q  868 atgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaat 966  Q
    ||||| ||||||||| |||||||||||||| ||| |||| ||||||| ||||| || || || ||||||||||| || ||||  ||||||||||||||||    
T  47552093 atgagaaaatcattcaaagtttccataatatgaataatcgtaaaggataattactaatgttacaaatttttatatatagtgc-tcccactattcaaaaat 47552191  T
Q  967 cctggatcc 975  Q
    | |||||||    
T  47552192 catggatcc 47552200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 55511042 - 55510960
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||  |||||| |||||||||||||||    
T  55511042 agagcaatgatatttgaacaaccatttggtacaacttatttgaaaactttccttttctctattttcaatggtcaaaaacaatg 55510960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 479 - 559
Target Start/End: Complemental strand, 33438227 - 33438147
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||||||||||||| ||||||||||||||||||| | ||||| ||||||| ||||||| ||||| ||||||||||||||||    
T  33438227 gagcaatgatatttaaacaaccatttggtacaacttttttgataaccttcattttctctctttttattggtcaaaaacaat 33438147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 779 - 882
Target Start/End: Complemental strand, 46732755 - 46732653
Alignment:
Q  779 gaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatc 878  Q
    ||||| ||||||||||||||||  |||||| ||||||| | |||||||| ||||||||||||| | ||||||||| |||||||||||||||||| ||| |    
T  46732755 gaatcagatgcgaaatcaaatgggagatgactggttaattgattgtttaattatttatatagaaagagatatttt-attgatattgaaaatgagaaaaac 46732657  T
Q  879 attc 882  Q
    ||||    
T  46732656 attc 46732653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 40847549 - 40847470
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||  |||||||||||| ||||||||||    
T  40847549 gagcaatgatatttgaacaaccatttgacacaacctttttgacaaccttctttttct--cttttcattggtaaaaaacaatg 40847470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 483 - 555
Target Start/End: Original strand, 16508870 - 16508942
Alignment:
Q  483 aatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaa 555  Q
    |||| |||||||||||  ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  16508870 aatgctatttgaacaataatttggtacaacctacttgacaaccttcattttctctcttttcattggtcaaaaa 16508942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 478 - 533
Target Start/End: Complemental strand, 11997833 - 11997778
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttcctttt 533  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  11997833 agagtaatgatatttgaacaaccatttggtacaacctatttgacatcctttctttt 11997778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 775 - 921
Target Start/End: Complemental strand, 27907367 - 27907223
Alignment:
Q  775 tcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagca 874  Q
    |||||||||||||||||||||  ||   |||||| ||||||||  |||||||||||| ||||||||||  |||||||||  ||| ||||||||||||  |    
T  27907367 tcaagaatcggatgcgaaatcgcataggagatgaatggttaaacaattgtttagttacttatatagag--agatatttttgttggtattgaaaatgaaaa 27907270  T
Q  875 aatcattctaagtttccataataggaaaaatcataaaggacaattat 921  Q
    |||||||| |  ||| || |||| | | |||| ||||||||||||||    
T  27907269 aatcattcaatattttcaaaatatggagaatcgtaaaggacaattat 27907223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 23836989 - 23837070
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| ||  ||| ||||||| ||||| ||| |||||||||||||    
T  23836989 gagcaatgatatttaaacaatcatttggtacaacttatttgataattttctttttctctcttttaattagtcaaaaacaatg 23837070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 879 - 974
Target Start/End: Original strand, 26333241 - 26333336
Alignment:
Q  879 attctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatc 974  Q
    |||| |||||||||||||| ||| |||| || ||||||||||||| ||||| ||||||||||| || |||| ||| |||||||||||||| ||||||    
T  26333241 attcaaagtttccataatatgaataatcgtagaggacaattattaatgctacaaatttttatatatagtgc-cccgactattcaaaaatcttggatc 26333336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 731 - 795
Target Start/End: Complemental strand, 35747072 - 35747008
Alignment:
Q  731 tatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatc 795  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||||| ||| |||||| |||||    
T  35747072 tatcatcatatatctcaaatcctttcttgataatatgaatattatcaaaaattggatgcaaaatc 35747008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 18874811 - 18874894
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggta-caacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||| || |||| | | ||||||||| | ||||||| ||| |||||||||||||||||||    
T  18874811 agagcaatgatatttgaacaatcatttgctaacaacttttatgacaacctcctttttctctcttctcattggtcaaaaacaatg 18874894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 54801180 - 54801097
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttc-cttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||  |||||||||||  |||||||||||||||  |||| || ||||| |||||||||||| ||||    
T  54801180 agagcaatgatatttgaacaattatttggtacaatttatttgacaaccttcatttttttctctttttattggtcaaaaataatg 54801097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 26440842 - 26440764
Alignment:
Q  482 caatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||| || ||||| |||||| |||||||||||||||  ||||||   |||| |||||||||||||||||    
T  26440842 caatgatatttgaagaatcattttgtacaatctatttgacaacctttattttctttttttttattggtcaaaaacaatg 26440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 32621799 - 32621728
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||||||           |||||||||| |||||||||||||||||||||||    
T  32621799 gagcaatgatatttgaacaaccatttggtacaaccta----------ctccttttctctcttttcattggtcaaaaacaatg 32621728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 37977298 - 37977216
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||  ||   |||||| ||||||||| || ||||| ||||    
T  37977298 agagcaatgatatttgaacaaccatttggtacaacatttttgacaattttttctttctctcttttcattagtaaaaaataatg 37977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 655 - 749
Target Start/End: Original strand, 47551897 - 47551991
Alignment:
Q  655 tataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 749  Q
    ||||||| |||||||||||| ||||| ||||||||  || ||||||||| ||||||||||| | | ||||  ||| |||||||| ||||||||||    
T  47551897 tataatgtactaatagttgacattttaatcacatgaaccacacttatcacaaatcatttctttcttggcccgcacttatcatcaaatatctcaaa 47551991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 51039151 - 51039187
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||||||||||||||||||||||||||    
T  51039151 aagttgtcacaaagtagttgtacaaatatcatttctc 51039187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 5234366 - 5234441
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||| | | ||||||  ||  ||||||| ||||| |||||||||||||||||    
T  5234366 tgatatttgaacaaccatttgatacaacttttgtgacaattttttttttctctctttttattggtcaaaaacaatg 5234441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 764 - 976
Target Start/End: Complemental strand, 13028815 - 13028607
Alignment:
Q  764 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatatt 863  Q
    ||||||||||||||||||||||||  |||||| | ||  ||||||   ||||||| |||||    |||| |||||||||| | |||| || ||| || |     
T  13028815 tatgaatattatcaagaatcggatatgaaatcgactggtagatgaccagttaaataattgt----ttatatatatagagataaatatatttattaatttc 13028720  T
Q  864 gaaaatgagcaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaatgtgcaccccactattcaaa 963  Q
    ||||||||| |||| |||| || ||| |||||||  ||||| | || |||| |||||||| ||||  || |||||||| |||    || |||||||||||    
T  13028719 gaaaatgagaaaatgattcaaaattttcataatattaaaaaacgtagaggataattattaatgcttaaattttttatatatggtatcctcactattcaaa 13028620  T
Q  964 aatcctggatccg 976  Q
    |||| ||||||||    
T  13028619 aatcttggatccg 13028607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 31275322 - 31275247
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||||||| |||||| | | ||||||  |   ||||||| |||||||||||||||||||||||    
T  31275322 tgatatttgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaatg 31275247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 479 - 514
Target Start/End: Original strand, 41010060 - 41010095
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacct 514  Q
    ||||||||||||||||||||||||||||||||||||    
T  41010060 gagcaatgatatttgaacaaccatttggtacaacct 41010095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 485 - 559
Target Start/End: Complemental strand, 22071674 - 22071600
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||| | |||||||||||||||||| | ||||||||| ||| ||||||| ||| | |||||| |||||||||    
T  22071674 tgatattagtacaaccatttggtacaacttgtttgacaactttctttttctctcttcttattggttaaaaacaat 22071600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 486 - 560
Target Start/End: Complemental strand, 31658094 - 31658020
Alignment:
Q  486 gatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||| |||| | | | ||||||| |   ||||||| |||||||||||||||||||||||    
T  31658094 gatatttgaacaaccatttgatacagcttttgtgacaacttcttttttctcacttttcattggtcaaaaacaatg 31658020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 480 - 514
Target Start/End: Complemental strand, 48783975 - 48783941
Alignment:
Q  480 agcaatgatatttgaacaaccatttggtacaacct 514  Q
    |||||||||||||||||||||||||||||||||||    
T  48783975 agcaatgatatttgaacaaccatttggtacaacct 48783941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 51389499 - 51389417
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||| ||||||||||||||||||||| |||||| | | ||||||| |   ||||||| ||||||||| || ||||||||||    
T  51389499 agagcagtgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattagtaaaaaacaatg 51389417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 524
Target Start/End: Complemental strand, 7795182 - 7795137
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaac 524  Q
    ||||||||||||||||||||||||||| |||||||| | |||||||    
T  7795182 gagcaatgatatttgaacaaccatttgatacaacctttatgacaac 7795137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 4896535 - 4896571
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4896535 aagttgtcacaaagtggttgtacaaatatcatttctc 4896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 6371016 - 6370980
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  6371016 aagttgtcacaaagtggttgtacaaatatcatttctc 6370980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 11064124 - 11064160
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11064124 aagttgtcacaaagtggttgtacaaatatcatttctc 11064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 11997721 - 11997685
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11997721 aagttgtcacaaagtggttgtacaaatatcatttctc 11997685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 15596432 - 15596396
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15596432 aagttgtcacaaagtggttgtacaaatatcatttctc 15596396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 22257231 - 22257267
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||||||||| |||||||||||||||    
T  22257231 aagttgtcacaaagtagttgttcaaatatcatttctc 22257267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 479 - 511
Target Start/End: Complemental strand, 23094557 - 23094525
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaa 511  Q
    |||||||||||||||||||||||||||||||||    
T  23094557 gagcaatgatatttgaacaaccatttggtacaa 23094525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 520 - 560
Target Start/End: Original strand, 24209717 - 24209757
Alignment:
Q  520 acaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  24209717 acaaccttccttttctctcatttcattggtcaaaaacaatg 24209757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 26885327 - 26885291
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  26885327 aagttgtcacaaagtggttgtacaaatatcatttctc 26885291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 33093139 - 33093175
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  33093139 aagttgtcacaaaatagttgtacaaatatcatttctc 33093175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 34116575 - 34116611
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34116575 aagttgtcacaaagtggttgtacaaatatcatttctc 34116611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 35017189 - 35017153
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35017189 aagttgtcacaaaatagttgtacaaatatcatttctc 35017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 37547101 - 37547065
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37547101 aagttgtcacaaagtggttgtacaaatatcatttctc 37547065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 41119505 - 41119541
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  41119505 aagttgtcacaaagtggttgtacaaatatcatttctc 41119541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 46173586 - 46173550
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  46173586 aagttgtcacaaagtggttgtacaaatatcatttctc 46173550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 47014975 - 47014939
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  47014975 aagttgtcacaaaatagttgtacaaatatcatttctc 47014939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 4896395 - 4896470
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||| | |||||  ||||| | | |||||||||   ||||||| |||||||||||||||||||||||    
T  4896395 tgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaacaatg 4896470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 798 - 881
Target Start/End: Original strand, 24368009 - 24368092
Alignment:
Q  798 atgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagcaaatcatt 881  Q
    ||||||||||| || |||| | ||| |||| ||| |||||| ||||  |||||||| ||||| |||||||||||| ||||||||    
T  24368009 atgaaagatgaatgattaattaattatttatttacttatattgagagtgatatttttattgacattgaaaatgagaaaatcatt 24368092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 556
Target Start/End: Complemental strand, 34260010 - 34259931
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaac 556  Q
    |||| ||||||||||| ||||||||||||| ||||| | | |||||| |||| ||||||| ||| | |||||||||||||    
T  34260010 agagtaatgatatttgtacaaccatttggtgacaacttttgtgacaaacttctttttctctcttcttattggtcaaaaac 34259931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 560
Target Start/End: Original strand, 42510812 - 42510895
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||| | ||||| |   |||| |||| | |||||||  |||||||| |||||||||||||    
T  42510812 agagcaatgatatttgaacaaccatttgctaacaactttgatgacgacctcctttttctctattttcatttgtcaaaaacaatg 42510895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 478 - 559
Target Start/End: Complemental strand, 3476052 - 3475970
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    |||| ||||||||||  ||||||||||| | ||||| | | ||||||||||  ||||||  ||||||||||||||||||||||    
T  3476052 agagtaatgatattttgacaaccatttgatgacaacatttgtgacaaccttatttttctttcttttcattggtcaaaaacaat 3475970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 652 - 750
Target Start/End: Complemental strand, 13029076 - 13028978
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaat 750  Q
    |||||||||| || ||||||||| ||||||| ||||||  || ||||||||| ||||||||| ||| | || | |||  ||| ||||||||||| ||||    
T  13029076 tagtataatgtacgaatagttgacattttgaccacatgatccacacttatcacaaatcatttatctcttggtccacatctataatcatatatctgaaat 13028978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 480 - 514
Target Start/End: Original strand, 24209689 - 24209723
Alignment:
Q  480 agcaatgatatttgaacaaccatttggtacaacct 514  Q
    ||||||||||||| |||||||||||||||||||||    
T  24209689 agcaatgatatttaaacaaccatttggtacaacct 24209723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 485 - 559
Target Start/End: Original strand, 42915114 - 42915188
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||| ||||| |||||| | | ||||||| |   ||||||| |||||||||||| |||||||||    
T  42915114 tgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 42915188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Original strand, 940297 - 940330
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||| |||||||||||||||||||||||    
T  940297 ttgtcacaaaatagttgtacaaatatcatttctc 940330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 483 - 559
Target Start/End: Original strand, 2613509 - 2613586
Alignment:
Q  483 aatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||||||||||| | ||||| | | |||||| || | || |||| ||||| ||||||||||||||||    
T  2613509 aatgatatttgaacaaccatttgataacaacttttgtgacaatctactttctctctcttttaattggtcaaaaacaat 2613586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 8456046 - 8456005
Alignment:
Q  518 tgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||    
T  8456046 tgacaaccttctttttctctctttttattggtcaaaaacaat 8456005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 12638858 - 12638825
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||| |||||||||||||||||||||||||||||    
T  12638858 ttgttacaaagtagttgtacaaatatcatttctc 12638825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 641
Target Start/End: Complemental strand, 26440709 - 26440676
Alignment:
Q  608 ttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||| |||||||||||||||||||||    
T  26440709 ttgtcacaaagtggttgtacaaatatcatttctc 26440676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 33860435 - 33860516
Alignment:
Q  480 agcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||| | ||||| |   |||||||||   ||||||| ||| | |||||||||||||||||    
T  33860435 agcaatgatatttgaacaaccatttgctaacaactttgatgacaacctcatttttctctcttattattggtcaaaaacaatg 33860516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 483 - 559
Target Start/End: Original strand, 41609564 - 41609641
Alignment:
Q  483 aatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaat 559  Q
    ||||||||||||||||||||||| | ||||  | | |||||| || | ||||||| ||||| ||||||||||||||||    
T  41609564 aatgatatttgaacaaccatttgatgacaatttttgtgacaatctactttttctctcttttaattggtcaaaaacaat 41609641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 638
Target Start/End: Complemental strand, 48326588 - 48326555
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcattt 638  Q
    ||||||||||||||| ||||||||||||||||||    
T  48326588 aagttgtcacaaagtggttgtacaaatatcattt 48326555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 478 - 554
Target Start/End: Complemental strand, 35018 - 34942
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaa 554  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  35018 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttcattttctctcttttcattggtcaaaa 34942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 7e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 440901 - 440819
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||| ||||||||||    
T  440901 agagcaatgatatttgaacaaccatttggtacaatctatttgacaatctttcttttctctcttttcattggtaaaaaacaatg 440819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 440754 - 440718
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||| |||||||||||||||||||||||||||    
T  440754 aagttgtcataaagtagttgtacaaatatcatttctc 440718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 16483 - 16564
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||| ||||||||||||||||||| | |||||||| |||| ||||||| | |||||||||||||||||||||    
T  16483 gagcaatgatatttcaacaaccatttggtacaacttttttgacaatcttctttttctctcgtttcattggtcaaaaacaatg 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 479 - 560
Target Start/End: Complemental strand, 56361 - 56280
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||| ||||||||||||||||||| | |||||||| |||| ||||||| | |||||||||||||||||||||    
T  56361 gagcaatgatatttcaacaaccatttggtacaacttttttgacaatcttctttttctctcgtttcattggtcaaaaacaatg 56280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 876 - 976
Target Start/End: Complemental strand, 7957 - 7857
Alignment:
Q  876 atcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatc 974  Q
    ||||||| |||||||||||||| ||| |||  || | ||||||||||| ||||| | ||||||||| || |||| |||||||||||||||||||||||||    
T  7957 atcattcaaagtttccataatatgaataattgtagatgacaattattaatgctacagatttttatatatagtgc-ccccactattcaaaaatcctggatc 7859  T
Q  975 cg 976  Q
    ||    
T  7858 cg 7857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 770 - 843
Target Start/End: Complemental strand, 8034 - 7961
Alignment:
Q  770 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagaga 843  Q
    |||||| ||||||  ||||||||||||| |    ||||| ||||||||| ||||||||||||||| ||||||||    
T  8034 tattattaagaattagatgcgaaatcaagtaggggatgactggttaaatgattgtttagttatttttatagaga 7961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 652 - 749
Target Start/End: Complemental strand, 8132 - 8036
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 749  Q
    |||||||||| | |||||||||| |||| |||||||||   | ||||||||| ||||||||||| | | |||| |||| | || ||||||||||||||    
T  8132 tagtataatgtattaatagttgacattt-gatcacatgaatcacacttatcacaaatcatttctatcttggcccacacttgtcgtcatatatctcaaa 8036  T

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Target: scaffold0229 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 876 - 976
Target Start/End: Complemental strand, 8285 - 8185
Alignment:
Q  876 atcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcaccccactattcaaaaatcctggatc 974  Q
    ||||||| |||||||||||||| ||| |||  || | ||||||||||| ||||| | ||||||||| || |||| |||||||||||||||||||||||||    
T  8285 atcattcaaagtttccataatatgaataattgtagatgacaattattaatgctacagatttttatatatagtgc-ccccactattcaaaaatcctggatc 8187  T
Q  975 cg 976  Q
    ||    
T  8186 cg 8185  T

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Target: scaffold0229; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 770 - 843
Target Start/End: Complemental strand, 8362 - 8289
Alignment:
Q  770 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagaga 843  Q
    |||||| ||||||  ||||||||||||| |    ||||| ||||||||| ||||||||||||||| ||||||||    
T  8362 tattattaagaattagatgcgaaatcaagtaggggatgactggttaaatgattgtttagttatttttatagaga 8289  T

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Target: scaffold0229; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 652 - 749
Target Start/End: Complemental strand, 8460 - 8364
Alignment:
Q  652 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 749  Q
    |||||||||| | |||||||||| |||| |||||||||   | ||||||||| ||||||||||| | | |||| |||| | || ||||||||||||||    
T  8460 tagtataatgtattaatagttgacattt-gatcacatgaatcacacttatcacaaatcatttctatcttggcccacacttgtcgtcatatatctcaaa 8364  T

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Target: scaffold0115 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 15084 - 15158
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| |||||||||||| | | |||||| |||| |||||||  ||||||||||| ||||||||||    
T  15084 tgatatttgaacaactatttggtacaacttttgtgacaa-cttctttttctcttttttcattggttaaaaacaatg 15158  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 478 - 560
Target Start/End: Complemental strand, 337301 - 337219
Alignment:
Q  478 agagcaatgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    |||||||||||||||||||||  |||||||||||  | ||| ||||  ||| |||||||  |||| |||||||||||||||||    
T  337301 agagcaatgatatttgaacaattatttggtacaatattttttacaattttctttttctctttttttattggtcaaaaacaatg 337219  T

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Target: scaffold0662 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 1114 - 1078
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1114 aagttgtcacaaaatagttgtacaaatatcatttctc 1078  T

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Target: scaffold0508 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 11571 - 11607
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||||| |||||||||||||||||||    
T  11571 aagttgtcacaaagtagatgtacaaatatcatttctc 11607  T

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Target: scaffold0318 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 479 - 558
Target Start/End: Original strand, 18179 - 18258
Alignment:
Q  479 gagcaatgatatttgaacaaccatttg-gtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaa 558  Q
    |||||||||||||||||||||||||||  |||||| | | ||||||||| |||| |||| ||| ||||| |||||||||||    
T  18179 gagcaatgatatttgaacaaccatttgcttacaacttttatgacaacctcccttctctctcttctcatt-gtcaaaaacaa 18258  T

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Target: scaffold0154 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 19726 - 19762
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19726 aagttgtcacaaaatagttgtacaaatatcatttctc 19762  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Complemental strand, 113661 - 113625
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  113661 aagttgtcacaaagtggttgtacaaatatcatttctc 113625  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 219699 - 219735
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttctc 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  219699 aagttgtcacaaagtggttgtacaaatatcatttctc 219735  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 605 - 640
Target Start/End: Original strand, 15569 - 15604
Alignment:
Q  605 aagttgtcacaaagtagttgtacaaatatcatttct 640  Q
    ||||||||||||||| ||||||||||||||||||||    
T  15569 aagttgtcacaaagtggttgtacaaatatcatttct 15604  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 18179 - 18105
Alignment:
Q  485 tgatatttgaacaaccatttggtacaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||||||||||||| ||||| |||||| | | ||||||| ||  ||||||| |||||||||||| ||||||||||    
T  18179 tgatatttgaacaactatttgatacaacttttatgacaactttt-ttttctctcttttcattggttaaaaacaatg 18105  T

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Target: scaffold0086 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 17218 - 17300
Alignment:
Q  479 gagcaatgatatttgaacaaccatttggt-acaacctatttgacaaccttccttttctcccttttcattggtcaaaaacaatg 560  Q
    ||||| ||||||||||||||| |||| |  ||||| ||| ||| ||||||| |||||||  |||| |||||||||||||||||    
T  17218 gagcagtgatatttgaacaactatttagcgacaacttatatgataaccttctttttctctttttttattggtcaaaaacaatg 17300  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 611 - 641
Target Start/End: Complemental strand, 36032 - 36002
Alignment:
Q  611 tcacaaagtagttgtacaaatatcatttctc 641  Q
    |||||||||||||||||||||||||||||||    
T  36032 tcacaaagtagttgtacaaatatcatttctc 36002  T

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