View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5591_high_16 (Length: 231)
Name: NF5591_high_16
Description: NF5591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5591_high_16 |
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Alignment Details
Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 32343277 - 32343412
Alignment:
| Q |
5 |
caccaataacaccccctccaatccctcctacacctcctccaattcctttgtaagcaaaacctccaattccacctccaattcccttagatgttccacctcc |
104 |
Q |
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| T |
32343277 |
caccaataacaccccctccaatccctcctacacctcctccaattcctttgtaagcaaaacctccaattccacctccaattcccttagatattccacctcc |
32343376 |
T |
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| Q |
105 |
ataacctccaattccacctacaattcccttagatat |
140 |
Q |
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| T |
32343377 |
ataacctccaattccaccaacaattcccttagatat |
32343412 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 32343379 - 32343421
Alignment:
| Q |
62 |
aacctccaattccacctccaattcccttagatgttccacctcc |
104 |
Q |
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| T |
32343379 |
aacctccaattccaccaacaattcccttagatattccacctcc |
32343421 |
T |
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