View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5591_low_3 (Length: 401)

Name: NF5591_low_3
Description: NF5591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5591_low_3
NF5591_low_3
[»] chr7 (70 HSPs)
chr7 (1-349)||(16219347-16219703)
chr7 (1-349)||(47831942-47832298)
chr7 (2-349)||(810761-811117)
chr7 (1-349)||(16056462-16056818)
chr7 (2-358)||(67869-68235)
chr7 (1-315)||(16324174-16324496)
chr7 (4-347)||(22073052-22073403)
chr7 (2-358)||(9389327-9389692)
chr7 (2-358)||(18005771-18006130)
chr7 (2-358)||(44014300-44014663)
chr7 (1-163)||(12255422-12255584)
chr7 (1-162)||(2279749-2279910)
chr7 (3-163)||(12756350-12756509)
chr7 (178-347)||(15754704-15754874)
chr7 (2-102)||(28504933-28505033)
chr7 (2-106)||(16385890-16385994)
chr7 (192-349)||(12901459-12901620)
chr7 (2-105)||(38227866-38227969)
chr7 (3-104)||(17061593-17061694)
chr7 (2-163)||(21064794-21064955)
chr7 (183-287)||(15113140-15113243)
chr7 (2-106)||(40443762-40443866)
chr7 (2-105)||(15754519-15754622)
chr7 (2-105)||(18302564-18302667)
chr7 (2-80)||(11995690-11995768)
chr7 (2-155)||(3563996-3564149)
chr7 (182-287)||(15116677-15116781)
chr7 (2-106)||(26212370-26212474)
chr7 (2-106)||(27847476-27847580)
chr7 (2-105)||(9509575-9509678)
chr7 (2-105)||(12699218-12699321)
chr7 (12-126)||(2529619-2529733)
chr7 (2-163)||(15143668-15143830)
chr7 (34-127)||(1867650-1867743)
chr7 (34-127)||(14045188-14045281)
chr7 (34-127)||(14355218-14355311)
chr7 (3-163)||(44116833-44116992)
chr7 (2-101)||(2831938-2832037)
chr7 (2-105)||(9751182-9751285)
chr7 (182-347)||(11995850-11996014)
chr7 (46-127)||(12901769-12901850)
chr7 (182-347)||(28505121-28505285)
chr7 (178-347)||(34200920-34201088)
chr7 (2-102)||(34201172-34201272)
chr7 (2-105)||(39267278-39267381)
chr7 (1-55)||(18154468-18154522)
chr7 (34-127)||(14036638-14036731)
chr7 (34-127)||(14346668-14346761)
chr7 (33-99)||(9177252-9177318)
chr7 (21-99)||(17017042-17017120)
chr7 (2-55)||(19649117-19649170)
chr7 (2-63)||(24054894-24054955)
chr7 (3-67)||(2760549-2760613)
chr7 (3-67)||(3272209-3272273)
chr7 (21-125)||(15008095-15008199)
chr7 (182-218)||(9751370-9751406)
chr7 (182-218)||(39267466-39267502)
chr7 (12-55)||(10508725-10508768)
chr7 (33-99)||(11768526-11768592)
chr7 (1-39)||(14194729-14194767)
chr7 (317-347)||(16495536-16495566)
chr7 (12-73)||(11880668-11880729)
chr7 (360-393)||(48273392-48273425)
chr7 (360-396)||(67745-67781)
chr7 (182-218)||(2529873-2529909)
chr7 (12-52)||(9703703-9703743)
chr7 (317-349)||(14044883-14044915)
chr7 (317-349)||(14354913-14354945)
chr7 (360-396)||(18430709-18430745)
chr7 (360-396)||(47831807-47831843)
[»] scaffold0243 (2 HSPs)
scaffold0243 (1-349)||(5753-6109)
scaffold0243 (360-396)||(6208-6244)
[»] chr5 (51 HSPs)
chr5 (1-349)||(21329126-21329483)
chr5 (1-349)||(26011665-26012021)
chr5 (1-307)||(21741174-21741489)
chr5 (2-349)||(21565677-21566033)
chr5 (3-347)||(22959166-22959519)
chr5 (1-218)||(5888806-5889032)
chr5 (1-126)||(21498648-21498773)
chr5 (182-349)||(21501974-21502142)
chr5 (1-163)||(22144378-22144540)
chr5 (2-287)||(19669094-19669389)
chr5 (2-163)||(1096795-1096956)
chr5 (2-106)||(21292613-21292717)
chr5 (182-349)||(20026760-20026926)
chr5 (2-105)||(21985779-21985882)
chr5 (2-166)||(23390128-23390293)
chr5 (2-105)||(21871203-21871306)
chr5 (2-105)||(21875483-21875586)
chr5 (2-105)||(24529607-24529710)
chr5 (3-104)||(11580878-11580979)
chr5 (1-126)||(20026494-20026619)
chr5 (11-104)||(36154469-36154562)
chr5 (2-105)||(19660469-19660572)
chr5 (191-347)||(19660666-19660822)
chr5 (2-106)||(22075393-22075497)
chr5 (2-105)||(9078338-9078441)
chr5 (11-105)||(22119834-22119928)
chr5 (21-127)||(22177794-22177900)
chr5 (2-106)||(8286485-8286589)
chr5 (2-105)||(13095880-13095983)
chr5 (2-105)||(24493954-24494057)
chr5 (2-105)||(25431780-25431883)
chr5 (2-80)||(25421943-25422021)
chr5 (208-349)||(22178064-22178205)
chr5 (3-102)||(22107017-22107116)
chr5 (182-218)||(22120013-22120049)
chr5 (2-105)||(13025696-13025799)
chr5 (2-105)||(24766969-24767072)
chr5 (8-55)||(37724337-37724384)
chr5 (182-218)||(24767157-24767193)
chr5 (12-55)||(23201802-23201845)
chr5 (33-99)||(26732421-26732487)
chr5 (33-99)||(26740234-26740300)
chr5 (317-347)||(36314685-36314715)
chr5 (3-52)||(17918796-17918845)
chr5 (317-358)||(21741487-21741528)
chr5 (12-52)||(18769647-18769687)
chr5 (360-396)||(21329582-21329618)
chr5 (8-52)||(21366305-21366349)
chr5 (135-163)||(21501919-21501947)
chr5 (360-396)||(21502241-21502277)
chr5 (12-52)||(21887260-21887300)
[»] chr3 (82 HSPs)
chr3 (1-349)||(14234622-14234980)
chr3 (1-349)||(15471059-15471414)
chr3 (1-358)||(1465040-1465406)
chr3 (2-349)||(16097463-16097819)
chr3 (2-279)||(32307872-32308157)
chr3 (2-349)||(49389276-49389616)
chr3 (1-163)||(2050832-2050992)
chr3 (21-163)||(324563-324705)
chr3 (2-287)||(12933942-12934236)
chr3 (2-287)||(49667716-49668009)
chr3 (33-162)||(52523390-52523519)
chr3 (2-287)||(1644315-1644608)
chr3 (2-163)||(53070331-53070491)
chr3 (2-287)||(9513104-9513399)
chr3 (2-287)||(9521079-9521374)
chr3 (3-349)||(16103914-16104268)
chr3 (2-163)||(17247918-17248079)
chr3 (7-163)||(42386739-42386895)
chr3 (2-105)||(18438920-18439023)
chr3 (2-105)||(14179708-14179811)
chr3 (2-163)||(40213353-40213514)
chr3 (3-249)||(12171750-12171992)
chr3 (182-274)||(13210148-13210240)
chr3 (2-106)||(20698079-20698183)
chr3 (2-105)||(11424395-11424498)
chr3 (21-127)||(605942-606048)
chr3 (21-126)||(23275106-23275211)
chr3 (192-349)||(37250996-37251153)
chr3 (2-105)||(12340138-12340241)
chr3 (2-105)||(26687273-26687376)
chr3 (2-100)||(14973245-14973343)
chr3 (12-126)||(23412815-23412929)
chr3 (21-126)||(14501564-14501669)
chr3 (12-105)||(14572974-14573067)
chr3 (21-102)||(22109926-22110007)
chr3 (2-78)||(12399608-12399684)
chr3 (2-105)||(13209960-13210062)
chr3 (2-105)||(14669146-14669249)
chr3 (2-85)||(17247152-17247235)
chr3 (2-105)||(25476017-25476120)
chr3 (21-127)||(43927544-43927650)
chr3 (192-349)||(22110180-22110337)
chr3 (21-126)||(45797608-45797713)
chr3 (2-106)||(30030213-30030317)
chr3 (28-127)||(12378360-12378459)
chr3 (2-105)||(14576465-14576568)
chr3 (2-105)||(17488243-17488346)
chr3 (2-105)||(17499725-17499828)
chr3 (192-295)||(43927322-43927425)
chr3 (12-102)||(4588457-4588547)
chr3 (11-105)||(14665991-14666085)
chr3 (11-105)||(14735504-14735598)
chr3 (21-127)||(37250763-37250869)
chr3 (2-85)||(43842584-43842667)
chr3 (21-95)||(316592-316666)
chr3 (2-55)||(15877461-15877514)
chr3 (178-218)||(12340017-12340057)
chr3 (182-218)||(14665870-14665906)
chr3 (182-218)||(14735383-14735419)
chr3 (33-125)||(21837866-21837958)
chr3 (2-105)||(12851996-12852099)
chr3 (2-106)||(16809774-16809874)
chr3 (3-52)||(17674209-17674258)
chr3 (1-62)||(22791727-22791788)
chr3 (182-218)||(4588608-4588644)
chr3 (41-105)||(13442660-13442724)
chr3 (182-218)||(14669025-14669061)
chr3 (2-163)||(23082993-23083155)
chr3 (11-54)||(23052719-23052762)
chr3 (33-99)||(9578070-9578136)
chr3 (317-347)||(12174216-12174246)
chr3 (317-347)||(13210284-13210314)
chr3 (8-50)||(16369845-16369887)
chr3 (3-52)||(3402600-3402649)
chr3 (3-52)||(11852006-11852055)
chr3 (2-55)||(12037586-12037639)
chr3 (12-52)||(321657-321697)
chr3 (12-52)||(12173221-12173261)
chr3 (8-52)||(12496690-12496734)
chr3 (8-52)||(15060727-15060771)
chr3 (12-52)||(17524817-17524857)
chr3 (8-52)||(18383556-18383600)
[»] scaffold0138 (2 HSPs)
scaffold0138 (1-349)||(13074-13430)
scaffold0138 (192-349)||(18066-18223)
[»] scaffold0530 (2 HSPs)
scaffold0530 (1-349)||(659-1020)
scaffold0530 (360-396)||(1119-1155)
[»] chr8 (69 HSPs)
chr8 (1-358)||(6520493-6520858)
chr8 (1-358)||(38854882-38855247)
chr8 (2-342)||(21673845-21674194)
chr8 (2-279)||(26355330-26355616)
chr8 (1-163)||(39834160-39834322)
chr8 (100-348)||(21285733-21285989)
chr8 (7-358)||(23760477-23760840)
chr8 (2-161)||(19801059-19801218)
chr8 (2-101)||(21491382-21491481)
chr8 (2-102)||(5865909-5866009)
chr8 (1-127)||(20499024-20499150)
chr8 (2-163)||(41598512-41598673)
chr8 (2-106)||(45130663-45130767)
chr8 (2-105)||(18878869-18878972)
chr8 (3-105)||(7373135-7373237)
chr8 (182-347)||(5866097-5866261)
chr8 (14-126)||(13507653-13507765)
chr8 (14-126)||(13597185-13597297)
chr8 (2-102)||(17141302-17141402)
chr8 (2-105)||(6759643-6759746)
chr8 (1-60)||(21286652-21286711)
chr8 (2-105)||(21918642-21918745)
chr8 (2-101)||(22627125-22627224)
chr8 (2-105)||(23406767-23406870)
chr8 (2-102)||(16091973-16092073)
chr8 (191-347)||(17141050-17141206)
chr8 (2-106)||(31971629-31971733)
chr8 (12-127)||(982969-983083)
chr8 (2-105)||(18818042-18818145)
chr8 (2-105)||(20536594-20536697)
chr8 (2-105)||(21255605-21255708)
chr8 (2-105)||(28648676-28648779)
chr8 (21-127)||(17266567-17266673)
chr8 (209-349)||(983248-983391)
chr8 (2-99)||(21414859-21414956)
chr8 (182-347)||(21491129-21491293)
chr8 (2-163)||(22875393-22875554)
chr8 (2-106)||(16199290-16199394)
chr8 (2-105)||(21249767-21249870)
chr8 (21-127)||(24353464-24353570)
chr8 (12-106)||(25362793-25362887)
chr8 (192-349)||(17266821-17266978)
chr8 (208-349)||(20498698-20498839)
chr8 (192-349)||(22364797-22364954)
chr8 (2-102)||(21923560-21923660)
chr8 (33-127)||(17439092-17439186)
chr8 (12-102)||(23648942-23649032)
chr8 (33-127)||(37116788-37116882)
chr8 (182-347)||(21249519-21249682)
chr8 (192-349)||(37116484-37116641)
chr8 (33-127)||(40492438-40492533)
chr8 (192-349)||(24353156-24353316)
chr8 (1-62)||(5610269-5610330)
chr8 (3-52)||(16409889-16409938)
chr8 (3-52)||(16860971-16861020)
chr8 (182-347)||(21255357-21255520)
chr8 (2-55)||(21389085-21389138)
chr8 (28-103)||(2418457-2418532)
chr8 (33-127)||(16799929-16800024)
chr8 (33-99)||(22996313-22996379)
chr8 (3-52)||(16411903-16411952)
chr8 (12-73)||(19899510-19899571)
chr8 (21-102)||(22365128-22365209)
chr8 (360-396)||(6520368-6520404)
chr8 (8-52)||(15602656-15602700)
chr8 (8-52)||(15611108-15611152)
chr8 (21-125)||(20532981-20533085)
chr8 (12-52)||(30642934-30642974)
chr8 (360-396)||(38855336-38855372)
[»] chr4 (63 HSPs)
chr4 (1-358)||(39705919-39706284)
chr4 (1-358)||(15099474-15099840)
chr4 (13-358)||(15190441-15190795)
chr4 (1-163)||(43198219-43198381)
chr4 (2-349)||(8846507-8846864)
chr4 (3-163)||(15464562-15464722)
chr4 (2-287)||(12774194-12774487)
chr4 (1-163)||(13844867-13845029)
chr4 (1-163)||(52242824-52242986)
chr4 (192-349)||(12288038-12288195)
chr4 (12-126)||(15868277-15868391)
chr4 (1-113)||(13404-13516)
chr4 (2-106)||(3097017-3097121)
chr4 (2-106)||(7089251-7089355)
chr4 (2-106)||(12903131-12903234)
chr4 (28-127)||(12287791-12287890)
chr4 (8-105)||(16597031-16597128)
chr4 (3-163)||(21814936-21815095)
chr4 (3-163)||(21815265-21815424)
chr4 (3-163)||(21818358-21818517)
chr4 (2-163)||(44928555-44928716)
chr4 (2-105)||(16239624-16239728)
chr4 (2-105)||(15552199-15552302)
chr4 (2-105)||(24029127-24029230)
chr4 (192-349)||(53081979-53082137)
chr4 (5-106)||(14052948-14053049)
chr4 (182-347)||(16596782-16596946)
chr4 (192-349)||(46640285-46640441)
chr4 (2-101)||(14039039-14039138)
chr4 (11-105)||(6190819-6190913)
chr4 (21-127)||(53081748-53081854)
chr4 (21-126)||(32851816-32851921)
chr4 (2-105)||(13812441-13812544)
chr4 (2-105)||(15091283-15091386)
chr4 (2-105)||(20156922-20157025)
chr4 (2-105)||(22633845-22633948)
chr4 (2-163)||(16377154-16377315)
chr4 (2-102)||(44053218-44053318)
chr4 (2-105)||(7799083-7799186)
chr4 (12-99)||(17047726-17047813)
chr4 (2-105)||(22636820-22636923)
chr4 (182-224)||(22634033-22634075)
chr4 (21-127)||(46640031-46640137)
chr4 (208-349)||(13695-13836)
chr4 (3-104)||(44102597-44102697)
chr4 (182-218)||(24029006-24029042)
chr4 (182-217)||(3332151-3332186)
chr4 (191-258)||(15552039-15552106)
chr4 (184-218)||(20157112-20157146)
chr4 (28-99)||(17333749-17333820)
chr4 (317-347)||(15551951-15551981)
chr4 (33-99)||(32306582-32306648)
chr4 (182-216)||(32851642-32851676)
chr4 (12-73)||(44676047-44676108)
chr4 (12-52)||(13569948-13569988)
chr4 (182-218)||(13812629-13812665)
chr4 (12-52)||(15094209-15094249)
chr4 (12-52)||(15121446-15121486)
chr4 (360-396)||(16270320-16270356)
chr4 (8-52)||(16348331-16348375)
chr4 (12-52)||(23843915-23843955)
chr4 (33-113)||(26789792-26789872)
chr4 (360-396)||(39706373-39706409)
[»] chr6 (61 HSPs)
chr6 (1-349)||(23019541-23019897)
chr6 (2-287)||(19652390-19652684)
chr6 (1-314)||(27332915-27333236)
chr6 (1-314)||(27393655-27393976)
chr6 (2-342)||(22080369-22080719)
chr6 (1-162)||(25644651-25644812)
chr6 (1-163)||(25956252-25956414)
chr6 (2-347)||(29808515-29808869)
chr6 (178-347)||(1561437-1561607)
chr6 (192-349)||(19668507-19668664)
chr6 (2-347)||(28496105-28496458)
chr6 (3-163)||(18457043-18457202)
chr6 (2-106)||(20637926-20638030)
chr6 (2-105)||(1561689-1561792)
chr6 (12-163)||(4667855-4668006)
chr6 (2-102)||(19303173-19303273)
chr6 (2-106)||(20360603-20360707)
chr6 (2-105)||(18409459-18409562)
chr6 (3-106)||(18821463-18821566)
chr6 (2-105)||(22779859-22779962)
chr6 (12-163)||(4185465-4185616)
chr6 (1-127)||(20109579-20109705)
chr6 (12-163)||(4674702-4674853)
chr6 (208-295)||(9098370-9098457)
chr6 (2-85)||(17287428-17287511)
chr6 (2-105)||(25628987-25629090)
chr6 (21-127)||(19668812-19668918)
chr6 (31-163)||(4189284-4189416)
chr6 (2-106)||(16920276-16920380)
chr6 (2-105)||(15894062-15894165)
chr6 (2-105)||(21939769-21939872)
chr6 (2-105)||(22334514-22334617)
chr6 (1-127)||(9098080-9098206)
chr6 (2-76)||(25611355-25611429)
chr6 (192-290)||(35008344-35008442)
chr6 (2-63)||(22439227-22439288)
chr6 (6-163)||(29060868-29061025)
chr6 (2-105)||(20594159-20594262)
chr6 (12-126)||(19023814-19023928)
chr6 (33-99)||(35008618-35008684)
chr6 (2-55)||(19863413-19863466)
chr6 (21-99)||(18696955-18697034)
chr6 (208-271)||(20109354-20109417)
chr6 (3-52)||(18180925-18180974)
chr6 (2-63)||(22432677-22432738)
chr6 (2-63)||(25641816-25641877)
chr6 (12-105)||(31155040-31155133)
chr6 (3-67)||(15041184-15041248)
chr6 (2-66)||(22831916-22831980)
chr6 (21-99)||(18706706-18706785)
chr6 (33-99)||(20224412-20224478)
chr6 (33-99)||(22118396-22118462)
chr6 (192-290)||(23076926-23077024)
chr6 (2-55)||(22059376-22059429)
chr6 (317-349)||(9098467-9098499)
chr6 (2-106)||(11185876-11185980)
chr6 (360-396)||(17287881-17287917)
chr6 (12-52)||(21739665-21739705)
chr6 (360-396)||(25714417-25714453)
chr6 (360-396)||(27333303-27333339)
chr6 (360-396)||(27394043-27394079)
[»] chr1 (64 HSPs)
chr1 (1-349)||(22921498-22921856)
chr1 (1-358)||(35981318-35981683)
chr1 (3-349)||(20636983-20637339)
chr1 (2-349)||(52927613-52927968)
chr1 (2-349)||(33681142-33681498)
chr1 (1-163)||(28194079-28194241)
chr1 (3-278)||(20248481-20248765)
chr1 (3-271)||(22237841-22238117)
chr1 (172-342)||(49261481-49261651)
chr1 (1-124)||(43697727-43697850)
chr1 (2-287)||(21754232-21754524)
chr1 (182-349)||(21861389-21861555)
chr1 (2-106)||(22355817-22355921)
chr1 (2-106)||(22357503-22357607)
chr1 (182-287)||(12271744-12271848)
chr1 (182-349)||(21896078-21896241)
chr1 (2-106)||(20846862-20846966)
chr1 (2-106)||(27250372-27250476)
chr1 (21-127)||(41049619-41049725)
chr1 (2-163)||(433335-433496)
chr1 (192-349)||(16368115-16368272)
chr1 (1-102)||(16759115-16759216)
chr1 (9-102)||(20918990-20919083)
chr1 (1-126)||(21861125-21861250)
chr1 (2-163)||(34510108-34510269)
chr1 (1-113)||(21895863-21895975)
chr1 (2-105)||(22532655-22532758)
chr1 (8-106)||(21027054-21027152)
chr1 (1-103)||(21342536-21342638)
chr1 (1-103)||(21347401-21347503)
chr1 (21-127)||(26065358-26065464)
chr1 (192-349)||(50686748-50686905)
chr1 (2-106)||(38801034-38801138)
chr1 (21-127)||(35260706-35260812)
chr1 (2-77)||(21301170-21301245)
chr1 (33-127)||(16367873-16367967)
chr1 (3-105)||(20135573-20135675)
chr1 (1-55)||(21714983-21715037)
chr1 (182-287)||(20918798-20918902)
chr1 (46-105)||(50209889-50209948)
chr1 (29-124)||(50613699-50613794)
chr1 (29-124)||(50621527-50621622)
chr1 (41-127)||(50687032-50687118)
chr1 (33-126)||(16093479-16093572)
chr1 (2-55)||(22468329-22468382)
chr1 (2-104)||(22354204-22354306)
chr1 (33-99)||(27652808-27652874)
chr1 (33-99)||(48521036-48521102)
chr1 (3-50)||(3472560-3472607)
chr1 (2-52)||(8761266-8761316)
chr1 (317-347)||(14295508-14295538)
chr1 (317-347)||(20918738-20918768)
chr1 (317-347)||(51130698-51130728)
chr1 (33-75)||(52940464-52940506)
chr1 (320-349)||(22237762-22237791)
chr1 (192-349)||(41049864-41050021)
chr1 (192-349)||(50613945-50614101)
chr1 (192-349)||(50621773-50621929)
chr1 (360-396)||(13212991-13213027)
chr1 (2-102)||(20091106-20091206)
chr1 (8-52)||(22432422-22432466)
chr1 (12-52)||(22831021-22831061)
chr1 (178-218)||(28194265-28194305)
chr1 (12-52)||(42864854-42864894)
[»] scaffold0333 (4 HSPs)
scaffold0333 (1-349)||(6746-7103)
scaffold0333 (1-349)||(14126-14483)
scaffold0333 (360-396)||(6611-6647)
scaffold0333 (360-396)||(13991-14027)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-349)||(10662-11018)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-349)||(8150-8506)
scaffold0556 (2-347)||(6946-7300)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-349)||(32670-33026)
scaffold0034 (3-105)||(51517-51619)
[»] scaffold0207 (1 HSPs)
scaffold0207 (3-358)||(2277-2641)
[»] scaffold0020 (3 HSPs)
scaffold0020 (1-295)||(15461-15764)
scaffold0020 (1-55)||(179085-179139)
scaffold0020 (360-396)||(15862-15898)
[»] scaffold0621 (3 HSPs)
scaffold0621 (2-358)||(6660-7025)
scaffold0621 (182-287)||(8666-8770)
scaffold0621 (1-125)||(8911-9035)
[»] chr2 (44 HSPs)
chr2 (1-358)||(25175975-25176332)
chr2 (34-341)||(28406119-28406436)
chr2 (2-287)||(22133849-22134141)
chr2 (3-163)||(23708252-23708411)
chr2 (187-349)||(7556-7718)
chr2 (209-349)||(18786748-18786888)
chr2 (192-349)||(23791410-23791567)
chr2 (2-105)||(23660408-23660511)
chr2 (2-163)||(23076769-23076929)
chr2 (2-106)||(23286235-23286339)
chr2 (2-106)||(23654042-23654146)
chr2 (192-349)||(23207413-23207570)
chr2 (2-105)||(298447-298550)
chr2 (2-105)||(27753961-27754064)
chr2 (1-127)||(18786439-18786565)
chr2 (3-105)||(22730866-22730968)
chr2 (24-102)||(23071617-23071695)
chr2 (182-287)||(22459381-22459485)
chr2 (192-349)||(25109024-25109181)
chr2 (2-95)||(28291934-28292027)
chr2 (2-106)||(20309479-20309583)
chr2 (3-106)||(37760-37863)
chr2 (2-101)||(22737812-22737911)
chr2 (21-127)||(22412710-22412816)
chr2 (21-127)||(23207718-23207824)
chr2 (3-105)||(32451562-32451664)
chr2 (2-105)||(22337501-22337604)
chr2 (13-103)||(19672290-19672380)
chr2 (2-55)||(23100863-23100916)
chr2 (21-127)||(20519767-20519873)
chr2 (1-101)||(7307-7407)
chr2 (33-113)||(23005183-23005263)
chr2 (21-126)||(25109330-25109436)
chr2 (24-63)||(22740615-22740654)
chr2 (24-63)||(22758370-22758409)
chr2 (5-55)||(23038468-23038518)
chr2 (317-347)||(23071906-23071936)
chr2 (33-79)||(39827602-39827648)
chr2 (2-55)||(44369932-44369985)
chr2 (1-41)||(7679746-7679786)
chr2 (360-396)||(22731319-22731355)
chr2 (12-52)||(22798769-22798809)
chr2 (8-52)||(25963356-25963400)
chr2 (12-52)||(45677798-45677838)
[»] scaffold0010 (2 HSPs)
scaffold0010 (2-349)||(130040-130396)
scaffold0010 (21-127)||(60289-60395)
[»] scaffold0102 (2 HSPs)
scaffold0102 (2-358)||(19389-19755)
scaffold0102 (2-63)||(48093-48154)
[»] scaffold0028 (2 HSPs)
scaffold0028 (2-287)||(132848-133142)
scaffold0028 (182-358)||(62320-62496)
[»] scaffold0810 (1 HSPs)
scaffold0810 (3-218)||(3196-3420)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-349)||(7688-8044)
[»] scaffold0476 (3 HSPs)
scaffold0476 (182-349)||(12901-13068)
scaffold0476 (1-102)||(8191-8291)
scaffold0476 (1-101)||(13233-13332)
[»] scaffold0211 (1 HSPs)
scaffold0211 (2-287)||(28441-28735)
[»] scaffold0001 (1 HSPs)
scaffold0001 (3-287)||(160880-161173)
[»] scaffold0125 (1 HSPs)
scaffold0125 (2-349)||(45421-45778)
[»] scaffold1257 (1 HSPs)
scaffold1257 (182-358)||(2037-2214)
[»] scaffold0023 (5 HSPs)
scaffold0023 (182-349)||(100508-100676)
scaffold0023 (62-358)||(39864-40170)
scaffold0023 (2-163)||(101723-101883)
scaffold0023 (187-258)||(101619-101690)
scaffold0023 (2-57)||(39641-39696)
[»] scaffold0150 (1 HSPs)
scaffold0150 (2-287)||(32288-32572)
[»] scaffold0218 (3 HSPs)
scaffold0218 (172-349)||(7886-8059)
scaffold0218 (2-101)||(28912-29011)
scaffold0218 (182-287)||(29100-29204)
[»] scaffold0116 (2 HSPs)
scaffold0116 (24-163)||(43438-43577)
scaffold0116 (24-163)||(47358-47497)
[»] scaffold0008 (2 HSPs)
scaffold0008 (172-358)||(14506-14693)
scaffold0008 (3-52)||(30379-30428)
[»] scaffold1984 (2 HSPs)
scaffold1984 (2-279)||(334-619)
scaffold1984 (321-349)||(264-292)
[»] scaffold0278 (2 HSPs)
scaffold0278 (2-120)||(5964-6082)
scaffold0278 (182-358)||(5768-5944)
[»] scaffold0021 (7 HSPs)
scaffold0021 (192-349)||(136196-136354)
scaffold0021 (192-349)||(144904-145062)
scaffold0021 (2-139)||(62913-63050)
scaffold0021 (21-127)||(135942-136048)
scaffold0021 (21-127)||(144650-144756)
scaffold0021 (2-85)||(124988-125071)
scaffold0021 (2-53)||(175202-175253)
[»] scaffold0628 (1 HSPs)
scaffold0628 (2-290)||(2435-2731)
[»] scaffold0040 (2 HSPs)
scaffold0040 (192-349)||(103467-103624)
scaffold0040 (21-127)||(103234-103340)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-132)||(227851-227982)
[»] scaffold0555 (3 HSPs)
scaffold0555 (113-349)||(10283-10527)
scaffold0555 (1-82)||(10199-10280)
scaffold0555 (2-105)||(965-1068)
[»] scaffold0320 (1 HSPs)
scaffold0320 (1-158)||(12329-12485)
[»] scaffold1765 (1 HSPs)
scaffold1765 (182-349)||(1217-1383)
[»] scaffold0145 (2 HSPs)
scaffold0145 (2-105)||(39145-39248)
scaffold0145 (360-396)||(32942-32978)
[»] scaffold0031 (2 HSPs)
scaffold0031 (2-163)||(20058-20218)
scaffold0031 (2-55)||(65426-65479)
[»] scaffold1351 (2 HSPs)
scaffold1351 (192-349)||(141-298)
scaffold1351 (36-127)||(446-537)
[»] scaffold0358 (2 HSPs)
scaffold0358 (2-106)||(310-414)
scaffold0358 (2-106)||(5086-5190)
[»] scaffold0175 (3 HSPs)
scaffold0175 (2-102)||(34509-34609)
scaffold0175 (2-98)||(13485-13581)
scaffold0175 (178-287)||(34317-34425)
[»] scaffold0876 (1 HSPs)
scaffold0876 (2-105)||(2717-2820)
[»] scaffold0413 (3 HSPs)
scaffold0413 (192-343)||(12709-12860)
scaffold0413 (6-163)||(15251-15408)
scaffold0413 (12-127)||(13008-13123)
[»] scaffold0165 (3 HSPs)
scaffold0165 (12-127)||(27284-27399)
scaffold0165 (12-106)||(3855-3949)
scaffold0165 (12-106)||(7919-8013)
[»] scaffold0627 (1 HSPs)
scaffold0627 (2-163)||(232-393)
[»] scaffold0357 (2 HSPs)
scaffold0357 (21-127)||(13571-13677)
scaffold0357 (28-127)||(3134-3233)
[»] scaffold0228 (4 HSPs)
scaffold0228 (2-163)||(4835-4997)
scaffold0228 (2-163)||(12417-12579)
scaffold0228 (2-163)||(22369-22531)
scaffold0228 (12-52)||(18286-18326)
[»] scaffold1137 (1 HSPs)
scaffold1137 (3-267)||(1934-2207)
[»] scaffold0503 (1 HSPs)
scaffold0503 (3-163)||(12257-12416)
[»] scaffold0395 (2 HSPs)
scaffold0395 (2-103)||(594-695)
scaffold0395 (2-118)||(8124-8240)
[»] scaffold0142 (1 HSPs)
scaffold0142 (3-104)||(17167-17268)
[»] scaffold0120 (3 HSPs)
scaffold0120 (2-163)||(32591-32752)
scaffold0120 (2-163)||(46253-46414)
scaffold0120 (11-105)||(16473-16566)
[»] scaffold0016 (4 HSPs)
scaffold0016 (2-166)||(2175-2340)
scaffold0016 (12-105)||(207161-207254)
scaffold0016 (21-99)||(119202-119280)
scaffold0016 (182-218)||(207339-207375)
[»] scaffold0718 (1 HSPs)
scaffold0718 (2-106)||(4774-4878)
[»] scaffold0598 (1 HSPs)
scaffold0598 (2-106)||(695-799)
[»] scaffold0475 (1 HSPs)
scaffold0475 (12-163)||(9404-9555)
[»] scaffold0456 (1 HSPs)
scaffold0456 (2-106)||(10069-10173)
[»] scaffold0427 (1 HSPs)
scaffold0427 (2-106)||(13869-13973)
[»] scaffold0389 (1 HSPs)
scaffold0389 (2-102)||(13240-13340)
[»] scaffold0351 (1 HSPs)
scaffold0351 (2-102)||(16657-16757)
[»] scaffold0161 (2 HSPs)
scaffold0161 (2-102)||(2077-2177)
scaffold0161 (182-287)||(2265-2369)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-106)||(21275-21379)
[»] scaffold0075 (4 HSPs)
scaffold0075 (1-113)||(53102-53214)
scaffold0075 (2-105)||(7926-8029)
scaffold0075 (208-349)||(53393-53534)
scaffold0075 (182-218)||(8114-8150)
[»] scaffold1842 (1 HSPs)
scaffold1842 (2-101)||(692-791)
[»] scaffold0305 (1 HSPs)
scaffold0305 (2-105)||(20789-20892)
[»] scaffold0217 (1 HSPs)
scaffold0217 (2-105)||(16231-16334)
[»] scaffold0011 (2 HSPs)
scaffold0011 (2-101)||(167622-167721)
scaffold0011 (11-105)||(52298-52392)
[»] scaffold0022 (4 HSPs)
scaffold0022 (21-127)||(80702-80808)
scaffold0022 (192-349)||(78457-78614)
scaffold0022 (33-127)||(128557-128651)
scaffold0022 (230-349)||(128837-128955)
[»] scaffold0005 (1 HSPs)
scaffold0005 (23-125)||(268094-268196)
[»] scaffold0114 (3 HSPs)
scaffold0114 (2-107)||(15108-15213)
scaffold0114 (2-60)||(32908-32966)
scaffold0114 (12-52)||(7726-7766)
[»] scaffold0076 (1 HSPs)
scaffold0076 (21-118)||(24171-24268)
[»] scaffold0839 (1 HSPs)
scaffold0839 (11-163)||(1719-1870)
[»] scaffold0403 (1 HSPs)
scaffold0403 (2-106)||(5222-5326)
[»] scaffold0113 (1 HSPs)
scaffold0113 (2-106)||(32438-32542)
[»] scaffold0292 (2 HSPs)
scaffold0292 (2-101)||(732-831)
scaffold0292 (2-106)||(3855-3959)
[»] scaffold0122 (2 HSPs)
scaffold0122 (12-163)||(25707-25858)
scaffold0122 (2-105)||(33126-33229)
[»] scaffold0100 (1 HSPs)
scaffold0100 (2-105)||(20498-20601)
[»] scaffold0352 (1 HSPs)
scaffold0352 (2-104)||(17640-17742)
[»] scaffold0235 (2 HSPs)
scaffold0235 (12-126)||(14004-14118)
scaffold0235 (24-106)||(11178-11260)
[»] scaffold0056 (2 HSPs)
scaffold0056 (2-104)||(78994-79096)
scaffold0056 (24-105)||(16869-16950)
[»] scaffold0647 (1 HSPs)
scaffold0647 (2-103)||(5753-5854)
[»] scaffold0420 (1 HSPs)
scaffold0420 (192-349)||(6111-6268)
[»] scaffold0261 (5 HSPs)
scaffold0261 (182-347)||(15795-15959)
scaffold0261 (2-102)||(16047-16147)
scaffold0261 (2-60)||(1768-1826)
scaffold0261 (21-125)||(17917-18021)
scaffold0261 (182-215)||(18163-18196)
[»] scaffold0130 (2 HSPs)
scaffold0130 (2-103)||(28924-29025)
scaffold0130 (12-127)||(1345-1460)
[»] scaffold0037 (3 HSPs)
scaffold0037 (198-349)||(22509-22656)
scaffold0037 (2-105)||(79964-80067)
scaffold0037 (182-218)||(80152-80188)
[»] scaffold0490 (1 HSPs)
scaffold0490 (2-106)||(2326-2430)
[»] scaffold0309 (1 HSPs)
scaffold0309 (2-106)||(6984-7088)
[»] scaffold0266 (1 HSPs)
scaffold0266 (2-105)||(18590-18693)
[»] scaffold0221 (1 HSPs)
scaffold0221 (2-105)||(12441-12544)
[»] scaffold0151 (1 HSPs)
scaffold0151 (2-85)||(10550-10633)
[»] scaffold0121 (1 HSPs)
scaffold0121 (2-105)||(8165-8267)
[»] scaffold0042 (1 HSPs)
scaffold0042 (2-105)||(23934-24037)
[»] scaffold0026 (3 HSPs)
scaffold0026 (2-105)||(39563-39666)
scaffold0026 (2-105)||(40242-40345)
scaffold0026 (46-102)||(59179-59235)
[»] scaffold0601 (1 HSPs)
scaffold0601 (12-126)||(7095-7209)
[»] scaffold0231 (1 HSPs)
scaffold0231 (3-85)||(23288-23370)
[»] scaffold0123 (1 HSPs)
scaffold0123 (33-127)||(25546-25640)
[»] scaffold0080 (2 HSPs)
scaffold0080 (2-163)||(40240-40400)
scaffold0080 (192-347)||(19713-19868)
[»] scaffold0540 (1 HSPs)
scaffold0540 (2-98)||(645-741)
[»] scaffold0423 (1 HSPs)
scaffold0423 (2-70)||(10904-10972)
[»] scaffold0193 (1 HSPs)
scaffold0193 (2-106)||(13585-13689)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-106)||(47360-47464)
[»] scaffold0484 (1 HSPs)
scaffold0484 (12-106)||(1288-1382)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-55)||(26834-26888)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-55)||(36023-36077)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-55)||(36891-36945)
[»] scaffold0098 (2 HSPs)
scaffold0098 (21-103)||(29149-29231)
scaffold0098 (182-216)||(26855-26889)
[»] scaffold0586 (1 HSPs)
scaffold0586 (2-99)||(2245-2342)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-54)||(9069-9122)
[»] scaffold0247 (1 HSPs)
scaffold0247 (2-99)||(6460-6557)
[»] scaffold0139 (3 HSPs)
scaffold0139 (21-113)||(38751-38843)
scaffold0139 (195-295)||(38507-38607)
scaffold0139 (2-53)||(20418-20469)
[»] scaffold0070 (1 HSPs)
scaffold0070 (2-102)||(4912-5012)
[»] scaffold0639 (1 HSPs)
scaffold0639 (2-101)||(8865-8964)
[»] scaffold0347 (2 HSPs)
scaffold0347 (2-105)||(414-516)
scaffold0347 (182-218)||(293-329)
[»] scaffold0192 (2 HSPs)
scaffold0192 (2-105)||(10296-10399)
scaffold0192 (182-215)||(10178-10211)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-105)||(339583-339686)
[»] scaffold0109 (1 HSPs)
scaffold0109 (12-94)||(35512-35594)
[»] scaffold0004 (2 HSPs)
scaffold0004 (21-99)||(332784-332862)
scaffold0004 (12-63)||(70221-70272)
[»] scaffold0046 (2 HSPs)
scaffold0046 (182-279)||(11494-11591)
scaffold0046 (317-347)||(2131-2161)
[»] scaffold1403 (2 HSPs)
scaffold1403 (22-125)||(992-1095)
scaffold1403 (192-295)||(739-841)
[»] scaffold0032 (1 HSPs)
scaffold0032 (2-106)||(51953-52057)
[»] scaffold0166 (2 HSPs)
scaffold0166 (2-105)||(9466-9569)
scaffold0166 (182-218)||(9654-9690)
[»] scaffold0737 (2 HSPs)
scaffold0737 (21-127)||(1372-1478)
scaffold0737 (192-345)||(1626-1779)
[»] scaffold0615 (1 HSPs)
scaffold0615 (3-52)||(1718-1767)
[»] scaffold0006 (2 HSPs)
scaffold0006 (193-290)||(97201-97297)
scaffold0006 (193-290)||(106479-106575)
[»] scaffold0761 (1 HSPs)
scaffold0761 (11-55)||(5951-5995)
[»] scaffold0106 (2 HSPs)
scaffold0106 (2-66)||(1700-1764)
scaffold0106 (2-66)||(7677-7741)
[»] scaffold1895 (1 HSPs)
scaffold1895 (12-55)||(891-934)
[»] scaffold0210 (2 HSPs)
scaffold0210 (12-55)||(21449-21492)
scaffold0210 (12-55)||(29341-29384)
[»] scaffold0101 (1 HSPs)
scaffold0101 (12-55)||(8600-8643)
[»] scaffold0268 (1 HSPs)
scaffold0268 (12-102)||(577-667)
[»] scaffold0184 (1 HSPs)
scaffold0184 (317-347)||(1026-1056)
[»] scaffold0084 (1 HSPs)
scaffold0084 (2-80)||(10569-10647)
[»] scaffold1439 (1 HSPs)
scaffold1439 (360-393)||(106-139)
[»] scaffold0124 (1 HSPs)
scaffold0124 (12-101)||(24293-24382)
[»] scaffold0104 (2 HSPs)
scaffold0104 (14-67)||(2247-2300)
scaffold0104 (14-67)||(9929-9982)
[»] scaffold0079 (1 HSPs)
scaffold0079 (3-52)||(44486-44535)
[»] scaffold0043 (1 HSPs)
scaffold0043 (7-52)||(18676-18721)
[»] scaffold1124 (1 HSPs)
scaffold1124 (12-52)||(2312-2352)
[»] scaffold0393 (1 HSPs)
scaffold0393 (8-52)||(1926-1970)
[»] scaffold0324 (1 HSPs)
scaffold0324 (12-52)||(15837-15877)
[»] scaffold0311 (1 HSPs)
scaffold0311 (12-52)||(6721-6761)
[»] scaffold0171 (1 HSPs)
scaffold0171 (3-67)||(35155-35219)
[»] scaffold0111 (1 HSPs)
scaffold0111 (3-55)||(32867-32919)


Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 16219347 - 16219703
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||| ||||||||||||| || ||||||||||||||    
T  16219347 tgatttcataattttgacctttaagttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacc 16219446  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgt 191  Q
    ||||||||||||||||||||||||||| ||||  || |||||||||||| ||||||||||||  ||          ||||| ||| ||| ||||||||||    
T  16219447 tggaatagtttaagaatgaatttttgggagttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagttgtctagttacagaatgccttgt 16219546  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    | ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||     
T  16219547 t-aggttaaatgcgatctttgtcgcacaagttgatgttagttgatcttggaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 16219645  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  16219646 aattatataatctaatgttgttgttaatgttatataattgtatatacattacatgaat 16219703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 47832298 - 47831942
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | ||| |||||||| |    
T  47832298 tgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatc 47832199  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgt 191  Q
    |||||||||||||||| |||||||  | ||||  || |||||||||||| ||||||||||||  ||           || ||||| ||| ||||| ||||    
T  47832198 tggaatagtttaagaacgaattttgag-agttacacatgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgt 47832100  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| ||||||||||| || | ||||||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||     
T  47832099 ttaggttaaatgtgatctttgtcggacgagttgatgtgagttgatcttggaggttagaaactaagttatttatcttgttgttgttgtttcagtaagcctg 47832000  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||||||||||||||| |||| || |||||||||||||||||||||||||| ||||||    
T  47831999 aattgtataatctaatgttgtcgctaatgttatataattgtatatacattatatgaat 47831942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 2 - 349
Target Start/End: Original strand, 810761 - 811117
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||| | ||||||| |||||||||||||| | | | |||||||||||    
T  810761 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacct 810860  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtt 192  Q
    ||||    || ||||||||||||||  |  || ||||||||||||||| ||||||||||||| ||          |  |   || ||| |||||||||||    
T  810861 ggaaagaatttagaatgaatttttgtgaactgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagtacttatgttacaaaatgccttgtt 810960  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    || ||||||||||||||||||||| ||| ||||||  |||||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||| |    
T  810961 taagttaaatgcgatctttgtcgcgcaagttgatgtgagttgaccttggaagttagaaactaagttatttatcttgctgttgtagtttcagtaagcctga 811060  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  811061 attgtataatctaatgttgttgctaatgttatataattgtatatacattacatgaat 811117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 16056818 - 16056462
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||| | ||||||||| | |||| || ||||  || ||||||||||||||||||| | ||||||||||| || ||||||||||||||    
T  16056818 tgatttcgtagttttgatccttaagttgagctttaggtgattttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacc 16056719  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgt 191  Q
    |||||||||||||||||| |||||||| | ||  ||||||||||||||||||||||||||||| ||          ||  ||||| ||| ||||||||||    
T  16056718 tggaatagtttaagaatggatttttgggaattacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgt 16056619  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    | |||||||||||||||||||| |||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||| |||| ||||||| ||||||||     
T  16056618 t-aggttaaatgcgatctttgtagcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgatgttgttgtttcggtaagcctg 16056520  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||  ||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  16056519 aatgatataatctaatgttgttgttaatgttatataattgtatatacattacatgaat 16056462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 2 - 358
Target Start/End: Complemental strand, 68235 - 67869
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| ||||| |||||||  |||||||||| |||| ||||||| |||||||||||||| | |||||||||||||||    
T  68235 gatttcgtaattttgacttttgagttgatccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacct 68136  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtt 192  Q
    |||||| ||||||||  || || ||| ||||  |  |||||||||||| ||||||||||||| ||           |  ||||| ||| |||||||||||    
T  68135 ggaataatttaagaacaaacttgtgggagttacagatgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 68036  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    |||||||||||||||| ||||||||||| ||||||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||| |    
T  68035 taggttaaatgcgatccttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtgagcctga 67936  T
Q  293 att-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    |||  ||| ||||||| ||||||  |||||||||||||||||||||||||| |||||| ||| ||||    
T  67935 attaatatgatctaatgttgttgttaatgttatataattgtatatacattatatgaattatgttgat 67869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 315
Target Start/End: Complemental strand, 16324496 - 16324174
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||||| ||||||| |||||||||||||| |  |||||||||||||    
T  16324496 tgatttcgtaattttgacctttaagttgaaccttgaatgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacc 16324397  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctat---ctt------tgtccagtcacataatgccttgt 191  Q
    |||||||||||||||| |||||||||  ||||  |   ||||||||||| ||||||||||||  |   |||      || ||||| ||| |||||||||     
T  16324396 tggaatagtttaagaacgaatttttgagagttagattggaactcgccatggcgagtagaggccctcgccttgcgaactgcccagttacagaatgccttg- 16324298  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| |||| ||||||||  | ||||||  |||||||||| |||||||||||||||||| || ||||||||||| ||||||||||||||||     
T  16324297 ttaggttaaatgtgatccttgtcgcatgagttgatgtgagttgatcttagaggttagaaactaagttgttgatcttgctgttgttgtttcagtaagcctg 16324198  T
Q  292 aattgtataatctaatattgttgc 315  Q
    |||||||||||||||| |||||||    
T  16324197 aattgtataatctaatgttgttgc 16324174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 4 - 347
Target Start/End: Complemental strand, 22073403 - 22073052
Alignment:
Q  4 tttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgg 103  Q
    ||||||| ||||| || |||||||| |||||||| |||||| ||||||||||||||| ||||||| ||||| ||||||| || | ||||||||||||| |    
T  22073403 tttcgtagttttgccccttaagttggaccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctag 22073304  T
Q  104 aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgttta 194  Q
    ||||||||||||||| |||||||| ||||  ||||||||||||||| ||||||||||||  ||          ||  ||||| ||| ||||| ||| |||    
T  22073303 aatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctttg-tta 22073205  T
Q  195 ggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaat 294  Q
    |||||||||||||| ||||||||| | ||||||  ||||||||||  |||| || ||||||||| ||| ||||| |||| |||||||||||||||| |||    
T  22073204 ggttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttacaggtaaggaactaagttgtttgtcttgatgttgttgtttcagtaagcctgaat 22073105  T
Q  295 tgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    | ||||||||||| ||||||  ||||||||||||||| |||||||||||||||    
T  22073104 tatataatctaatgttgttgttaatgttatataattgcatatacattacatga 22073052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 358
Target Start/End: Original strand, 9389327 - 9389692
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||| ||||||| ||||||||||||||| ||||||||| |||| ||| || |||||||| || |||||||||||||||| |||||||||||||||    
T  9389327 gattttgtacttttgacttttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacct 9389426  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||||||||||||| |||||| ||  ||||  | ||||||||||||| ||||||||||||| ||           |   |||| ||| |||||||||||    
T  9389427 ggaatagtttaagaacgaatttatgtgagttacagctgaactcgccatggcgagtagaggctctcgcctcgcgagctaagcagttacagaatgccttgtt 9389526  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    ||||||||| |||||||||||| ||| | ||||||  |||||||||||||||||||||||||||||||  | |||| |||| |  || ||||||||||      
T  9389527 taggttaaaagcgatctttgtcacacgagttgatgtgagttgatcttggaggttagaaactaagttatcgaccttgatgttgtcattccagtaagcctgg 9389626  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||||||  |||||| ||| ||||    
T  9389627 attgtatattctaatattgatgataatgttatataattgtatatacattgtatgaattatgttgat 9389692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 358
Target Start/End: Complemental strand, 18006130 - 18005771
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||| ||||||||      |||||||||||||    
T  18006130 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagatt------tgagattgaacct 18006037  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtt 192  Q
      ||||||||||||| ||| || ||| ||||  ||||||||||||||| |||| |||||||  ||          ||| | ||| ||| |||||||||||    
T  18006036 aaaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgactagaggccctcgcctcgcgaattgactagttacaaaatgccttgtt 18005937  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    |||| ||| ||||||||||||||||||| |||||   |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| |    
T  18005936 taggataa-tgcgatctttgtcgcacaagttgatatgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctga 18005838  T
Q  293 att-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
     ||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  18005837 tttaatatgatctaatgttgttgttaatggtatataattgtatatacattatatgaattatgttgat 18005771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 358
Target Start/End: Complemental strand, 44014663 - 44014300
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| ||||||  ||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  44014663 gatttcgtaattttgacttttgagttgatacttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 44014564  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||   ||| |||||||||||||| |||||| ||||||||||||||| | ||||||||||| ||           |  || || ||| |||||||||||    
T  44014563 ggaaagattttagaatgaatttttgttagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaaccggttacagaatgccttgtt 44014464  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    |||||||||||||||| ||||||||| | ||||||  ||||||||   ||||||| ||||||||||  ||||||||||||| |||||||||||||||| |    
T  44014463 taggttaaatgcgatcattgtcgcacgaattgatgtgagttgatc--agaggttaaaaactaagtt-gttatcttgctgttgttgtttcagtaagcctga 44014367  T
Q  293 att-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    |||  ||| ||||||| |||||   |||| ||||||| ||||||||||||| |||||| ||| ||||    
T  44014366 attaatatgatctaatgttgtttttaatggtatataactgtatatacattatatgaattatgttgat 44014300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 12255422 - 12255584
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||| | ||||||||    ||||||| |||| ||||| ||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  12255422 tgatttcgtagttttgatccttaagttggtatttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacc 12255521  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  12255522 tggaatagtttaagaatgaatttttgggagttacacctgaactcgccatagcgagtagaggct 12255584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2279749 - 2279910
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||| | |||||||||   ||||||| |||| |||||||||||||| |||||||| ||||||||||||| || ||||||||||||||    
T  2279749 tgattttgtagttttgatccttaagttgatatttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacc 2279848  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggc 162  Q
    || ||||||||||||||| ||||||||  |||  ||||||||||||||||||||||||||||    
T  2279849 tgtaatagtttaagaatggatttttgggtgttacacctgaactcgccatagcgagtagaggc 2279910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 12756350 - 12756509
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||||||||||    
T  12756350 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12756449  T
Q  103 gaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || || |||||||||||| ||||||| || || |||||||||| |||| |||||||||||||    
T  12756450 gatta-tttaagaatgaactttttggaagctg-acctgaactcaccatggcgagtagaggct 12756509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 15754704 - 15754874
Alignment:
Q  178 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 277  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||| | |||||||||||||||||| ||||||||||||||| |     
T  15754704 acataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgctgttaata 15754803  T
Q  278 tttcagtaagcctaaattgtat-aatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    || ||||||| || |    ||| ||| |||| ||| |   |||||||||||||||||||||||||||||||    
T  15754804 ttccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatatacattacatga 15754874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 28504933 - 28505033
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  28504933 gattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 28505032  T
Q  102 g 102  Q
    |    
T  28505033 g 28505033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 16385890 - 16385994
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  16385890 gattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 16385989  T
Q  102 ggaat 106  Q
    |||||    
T  16385990 ggaat 16385994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 12901620 - 12901459
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggt---ta-gaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||||||||||| ||  ||||||| || | ||||||  ||||||||||||||||   || ||||||||||| ||||||||| |||| |||||||||||||    
T  12901620 ttaggttaaatgtgacatttgtcgtacgagttgatgtgagttgatcttggaggtacgtaggaaactaagttgtttatcttgttgttgttgtttcagtaag 12901521  T
Q  288 cctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    | | |||| ||| || |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  12901520 cttgaattatatgatttaatgttgttgttaatgttatatagttgtatatacattacatgaat 12901459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 38227969 - 38227866
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  38227969 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 38227870  T
Q  102 ggaa 105  Q
    ||||    
T  38227869 ggaa 38227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 17061593 - 17061694
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||||||||||    
T  17061593 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17061692  T
Q  103 ga 104  Q
    ||    
T  17061693 ga 17061694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 21064794 - 21064955
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || ||||||| || | |||| |||||||||||||| | || ||||||||||||| |||||| ||||||||| ||| || | ||||||||||| |    
T  21064794 gattttgtgattttgagctgtgagtttaaccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaactt 21064893  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||||||| | |||||| |||||||   |||  |||| |||||||||| |||||||||||||    
T  21064894 ggaatagtgtcagaatggatttttgagtgttttaccttaactcgccatggcgagtagaggct 21064955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 15113243 - 15113140
Alignment:
Q  183 atgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttca 282  Q
    |||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||| ||||||||||||||||    
T  15113243 atgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctgctgttattgtttca 15113145  T
Q  283 gtaag 287  Q
    |||||    
T  15113144 gtaag 15113140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 40443866 - 40443762
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| | ||   |||||||||||||    
T  40443866 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 40443767  T
Q  102 ggaat 106  Q
    |||||    
T  40443766 ggaat 40443762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 15754519 - 15754622
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||| | ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||  ||| | |||||||||||||    
T  15754519 gatttcgaatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacct 15754618  T
Q  102 ggaa 105  Q
    ||||    
T  15754619 ggaa 15754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 18302667 - 18302564
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| ||||||||||||||||   || ||||||||||||||| ||||| ||||||||||||| ||||   |||||||||||||    
T  18302667 gatttcgtaattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacct 18302568  T
Q  102 ggaa 105  Q
    ||||    
T  18302567 ggaa 18302564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 11995690 - 11995768
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaaga 80  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  11995690 gatttcgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 3563996 - 3564149
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||||||  |||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  3563996 gatttcgttattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 3564095  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgag 155  Q
    ||||   ||  |||||||| |||||| | |   |||||||||||||| ||||||    
T  3564096 ggaaagattgtagaatgaacttttggaaatctgacctgaactcgccacagcgag 3564149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 15116781 - 15116677
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||| | |||||||||||||    
T  15116781 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctactgttattgtttc 15116683  T
Q  282 agtaag 287  Q
    ||||||    
T  15116682 agtaag 15116677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 26212474 - 26212370
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| |||||||| |||| ||||   |||||||||||||    
T  26212474 gattttgtaattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacct 26212375  T
Q  102 ggaat 106  Q
    |||||    
T  26212374 ggaat 26212370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 27847476 - 27847580
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| |||| || ||||||||||| | ||   |||||||||||||    
T  27847476 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacct 27847575  T
Q  102 ggaat 106  Q
    |||||    
T  27847576 ggaat 27847580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 9509678 - 9509575
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  9509678 gatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 9509579  T
Q  102 ggaa 105  Q
    ||||    
T  9509578 ggaa 9509575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 12699321 - 12699218
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   ||| |||||||||    
T  12699321 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacct 12699222  T
Q  102 ggaa 105  Q
    ||||    
T  12699221 ggaa 12699218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 2529619 - 2529733
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    ||||| || ||||||||||||||||||| |||| |||||||||| |||||||||||| |||||| ||| || || |||||||||| |||||  | |||||    
T  2529619 ttttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattggacctgacaaagttt 2529718  T
Q  112 aagaatgaatttttg 126  Q
    || |||| |||||||    
T  2529719 aaaaatggatttttg 2529733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 15143668 - 15143830
Alignment:
Q  2 gatttcgtaattttgaccttta-agttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||| |||||||| |||  ||||| ||||||||||  ||| ||||||||||||||| ||||||| ||||||||||||| || | ||||||||||||    
T  15143668 gatttcgtgattttgactttttgagttgtaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacc 15143767  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||||   ||| |||||||| |||||  | |   ||||| ||||||||| ||||| |||||||    
T  15143768 tggaaagattttagaatgaacttttgtgattctgacctgtactcgccatggcgagcagaggct 15143830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 1867650 - 1867743
Alignment:
Q  34 tagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||||||| |||||||||| |||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| ||||||||    
T  1867650 tagatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 1867743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 14045281 - 14045188
Alignment:
Q  34 tagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||||||| |||||||||| |||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| ||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 14045188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 14355311 - 14355218
Alignment:
Q  34 tagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||||||| |||||||||| |||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| ||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 14355218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 44116992 - 44116833
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||||||||||||  || |||||| ||||| |||  ||| ||| ||||||||||| ||||||| ||||||||||| |||| | |||||||||||| |    
T  44116992 atttcgtaattttgactcttgagttgatccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccg 44116893  T
Q  103 gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||| || || ||||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  44116892 gaa-agatttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 44116833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 2831938 - 2832037
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||    
T  2831938 gatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 2832037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 9751182 - 9751285
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | ||||||||||| ||||   |||| ||||||||    
T  9751182 gatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacct 9751281  T
Q  102 ggaa 105  Q
    ||||    
T  9751282 ggaa 9751285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 347
Target Start/End: Original strand, 11995850 - 11996014
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||||||||||||||||||||  | | ||||||  |||| ||||| ||||||||||||||| || |||| |||||||||| |||  |    
T  11995850 aatgcctt-tttaggttaaatgcgatctttgtcgttcgagttgatgtgagtttatcttagaggttagaaactaatttgtttaccttgctgttaatgtccc 11995948  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  11995949 agtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 11996014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 12901850 - 12901769
Alignment:
Q  46 agtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||||||||||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| ||||||||    
T  12901850 agtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12901769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 347
Target Start/End: Original strand, 28505121 - 28505285
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||| ||| | |||| |    
T  28505121 aatgcctt-tttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgttgtcaatgttcc 28505219  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  28505220 agtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 28505285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 34201088 - 34200920
Alignment:
Q  178 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 277  Q
    |||||||||||| ||||||||||||||||||  ||||   | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| ||    
T  34201088 acataatgcctt-tttaggttaaatgcgatccctgtcattcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatg 34200990  T
Q  278 tttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    |  ||||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  34200989 tcccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 34200920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 34201272 - 34201172
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| |||| |||||||||| ||||||| || | |||||| | || | |||||||||||||    
T  34201272 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacct 34201173  T
Q  102 g 102  Q
    |    
T  34201172 g 34201172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 39267278 - 39267381
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||| |||||||||||| |||  ||| ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||    
T  39267278 gattttgtgattttgacttttgagttgaaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 39267377  T
Q  102 ggaa 105  Q
    ||||    
T  39267378 ggaa 39267381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18154468 - 18154522
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  18154468 tgatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 18154522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 14036731 - 14036638
Alignment:
Q  34 tagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||||||| |||||||||| ||||| |||||| |||||| ||| || || ||||||||||||||| | | ||||||| |||| ||||||||    
T  14036731 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgg 14036638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 14346761 - 14346668
Alignment:
Q  34 tagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||||||| |||||||||| ||||| |||||| |||||| ||| || || ||||||||||||||| | | ||||||| |||| ||||||||    
T  14346761 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttgg 14346668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 9177252 - 9177318
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    |||||||||||| ||||||||||||||||||| ||| |||||| ||| || || |||||||||||||    
T  9177252 ttagatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaac 9177318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 17017042 - 17017120
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||||||| ||||||| |||| |||||||||| ||||| |||||| |||||| ||| || || |||||||||||||    
T  17017042 ttaagttgaactttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17017120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 19649117 - 19649170
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  19649117 gatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 19649170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 24054955 - 24054894
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtata 63  Q
    ||||| ||| ||||||| ||| ||||||||||||||||||||| |||||||||| |||||||    
T  24054955 gattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtata 24054894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 2760613 - 2760549
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataa 67  Q
    |||||||||||||||| ||| |||||||||||||||| |||| ||||||| || |||| ||||||    
T  2760613 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataa 2760549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 3272273 - 3272209
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataa 67  Q
    |||||||||||||||| ||| |||||||||||||||| |||| ||||||| || |||| ||||||    
T  3272273 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataa 3272209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 15008095 - 15008199
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || | ||||||||||||||||||||||| |||||  ||  || || ||||||||||||||||| | ||||| | |||| |    
T  15008095 ttaagtcgaactttagatgattctgagtgcctgaacatgtataataatgattagacaattttttagattgagattgaacctgggaaagttttaaaatgga 15008194  T
Q  121 ttttt 125  Q
    |||||    
T  15008195 ttttt 15008199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 9751370 - 9751406
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||| ||||||||||||||||||||||    
T  9751370 aatgccttgtttagtttaaatgcgatctttgtcgcac 9751406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 39267466 - 39267502
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||| ||||||||||||||    
T  39267466 aatgccttgtttaggttaaatgtgatctttgtcgcac 39267502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 10508725 - 10508768
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  10508725 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 10508768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 11768526 - 11768592
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| |||| ||||||||||||||||||| ||| |||||| ||| || || ||||| |||||||    
T  11768526 ttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaac 11768592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14194767 - 14194729
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatg 39  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  14194767 tgatttcgtaattttgacttttgagttgaaccttagatg 14194729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Complemental strand, 16495566 - 16495536
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  16495566 aatgttatataattgtatatacattacatga 16495536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 11880729 - 11880668
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattatta 73  Q
    ||||||| ||| ||||||||||||||||||||| ||||||| || |||| || |||| ||||    
T  11880729 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 11880668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 393
Target Start/End: Complemental strand, 48273425 - 48273392
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatga 393  Q
    ||||||||||||||||| ||||||||||||||||    
T  48273425 tgcataagtcggtctaagttgattaagatgatga 48273392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 67781 - 67745
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  67781 tgcatgagtcggtctaagttgattaagatgatgatgt 67745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 2529873 - 2529909
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    ||||||||  |||||||||||||||||||||||||||    
T  2529873 aatgccttaattaggttaaatgcgatctttgtcgcac 2529909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 9703743 - 9703703
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  9703743 ttttgacttttgagttgaaccttagatgtttttgagtgcct 9703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 349
Target Start/End: Complemental strand, 14044915 - 14044883
Alignment:
Q  317 aatgttatataattgtatatacattacatgaat 349  Q
    ||||||||||| |||||||||||||||||||||    
T  14044915 aatgttatatagttgtatatacattacatgaat 14044883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 349
Target Start/End: Complemental strand, 14354945 - 14354913
Alignment:
Q  317 aatgttatataattgtatatacattacatgaat 349  Q
    ||||||||||| |||||||||||||||||||||    
T  14354945 aatgttatatagttgtatatacattacatgaat 14354913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 18430745 - 18430709
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  18430745 tgcatgagtcggtctaagttgattaagatgatgatgt 18430709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 47831843 - 47831807
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  47831843 tgcatgagtcggtctaagttgattaagatgatgatgt 47831807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 198; Significance: 1e-108; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 5753 - 6109
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    ||||||||||  |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  5753 tgatttcgtagatttgacctttaagttgaatcttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacc 5852  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgt 191  Q
     | ||||||||||| ||| |||||  | | ||| ||||||||||||| ||||||||||||||  ||          ||  ||||| ||||||||||||||    
T  5853 agtaatagtttaaggatggattttgtg-atttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgt 5951  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  5952 ttaggttaaatgcgatctttgtcgcgcaagttgatgttagttgatcttggaggttaaaaactaagttatttatcttgctgttattgtttcagtaagcctg 6051  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  6052 aattgtataatctaatgttgttgctaatgttatataattgtatatacattacatgaat 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 6208 - 6244
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  6208 tgcatgagtcggtctaagttgattaagatgatgatgt 6244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 21329126 - 21329483
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || | || ||||| ||||||| || ||||||||||||||    
T  21329126 tgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacc 21329225  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgt 191  Q
    ||||||| |||| |||||||||||||| ||||| || |||||||||||||||||||||||||| ||          ||  | ||| ||| ||||||||||    
T  21329226 tggaataatttaggaatgaatttttgggagttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgt 21329325  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||||||||||||||||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||| |||| ||||||||||||||||     
T  21329326 ttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgttgttgtttcagtaagcctg 21329425  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  21329426 aattgtataatctaatgttgttgctaatgttatataattgtatatacattacatgaat 21329483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 26011665 - 26012021
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||| | ||||||||||| ||||||| || | |||| || ||||||| ||||||| |||| |||||||| |||||||||||||||||    
T  26011665 tgatttcgtagttttgatccttaagttgaactttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattctaaattgagattgaacc 26011764  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    |||||||||||||||||| |||||||| ||||  ||||||||||||||| ||||||||||||  ||          ||||| ||| ||| ||||| |||     
T  26011765 tggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccttcgcctcgcgagttgtctagttacagaatgctttg- 26011863  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| |||||||||| ||| | ||||||  ||||||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||     
T  26011864 ttaggttaaatgtgatctttgtcacacgagttgatgtgagttgatcttggaggttagaaactaagttgtttatcttgttattgttgtttcagtaagcctg 26011963  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    || | |||||||| || ||||||   ||||||||||||||||||||||||||||||||    
T  26011964 aactatataatctgatgttgttgttgatgttatataattgtatatacattacatgaat 26012021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 21741174 - 21741489
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| ||||||||||||||| ||||||||||| ||||| ||||||||||| ||||| || || | ||||||||||| || ||||||||||||||    
T  21741174 tgattttgtagttttgacctttaagtcgaaccttagatatttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacc 21741273  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctat--ctttgt-------ccagtcacataatgccttgt 191  Q
    |||||||||||||||| |||||| ||  ||||| ||||||||||||||| ||||||||||||| |  | | ||       ||||| |||||||| |||||    
T  21741274 tggaatagtttaagaacgaatttatgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgtgagctaaccagttacataatgtcttgt 21741373  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||| |||||||||||||||| | ||||||  |||||||||||||||||||||||||||||| ||| |||| |||| |  || ||||||||||     
T  21741374 ttaggttaaaagcgatctttgtcgcacgagttgatgtgagttgatcttggaggttagaaactaagttaattaccttgatgttgtcattccagtaagcctg 21741473  T
Q  292 aattgtataatctaat 307  Q
     |||||||| ||||||    
T  21741474 gattgtatattctaat 21741489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 349
Target Start/End: Complemental strand, 21566033 - 21565677
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  21566033 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 21565934  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctat--ctttgt-------ccagtcacataatgccttgtt 192  Q
    ||||   ||| |||||||||||| |  | ||| ||||||||||||||| ||||| ||||||| |  | | ||       | ||| ||| |||| ||||||    
T  21565933 ggaaagattttagaatgaattttcgtgaattgtacctgaactcgccatggcgagcagaggctctcgcctcgtgagctaactagttacagaatgacttgtt 21565834  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    || || |||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| |||||  |||||| || |    
T  21565833 tatgtaaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttctagtaagactga 21565734  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
        ||| |  | || |||||   |||||||||||||||||||||||||||||||||    
T  21565733 tgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaat 21565677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 347
Target Start/End: Original strand, 22959166 - 22959519
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | | ||||||||||||||    
T  22959166 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 22959265  T
Q  103 ga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    || | | ||| ||||||||||||||  |  |||||||||||||||||| ||||||||||||| ||           |  | ||| ||| |||||||||||    
T  22959266 gagagacttt-agaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtt 22959364  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    |||||||||||||||  |||| |||||| ||||||  |||||||||| ||||||| |||| ||||| ||||||||| |||| ||||| ||||||| || |    
T  22959365 taggttaaatgcgattcttgttgcacaagttgatgtgagttgatcttagaggttaaaaaccaagttgtttatcttgttgtttttgttccagtaagactga 22959464  T
Q  293 attgtat-aatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
        ||| |||| ||| ||| |   |||||||||||||||||||||||||||||||    
T  22959465 tgcatatgaatc-aatgttggttaaaatgttatataattgtatatacattacatga 22959519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 5888806 - 5889032
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| ||||||||||||||| ||| ||||||||||||| ||||||||||| ||||| || || |||||||||||||||| |||||||||||||     
T  5888806 tgattttgtagttttgacctttaagtcgaagcttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaaca 5888905  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgt 191  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||||||| ||||||||||||| ||           |  ||| | ||| ||||||||||    
T  5888906 tggaatagtttaagaatgaatctttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgt 5889005  T
Q  192 ttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||||    
T  5889006 ttaggttaaatgcgatctttgtcgcac 5889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21498648 - 21498773
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  21498648 tgattgcgtaattttgacctttaagttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacc 21498747  T
Q  101 tggaatagtttaagaatgaatttttg 126  Q
    |||||||||| |||||| ||||||||    
T  21498748 tggaatagttgaagaataaatttttg 21498773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 21501974 - 21502142
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttag-aaactaagttatttatcttgctgttattgttt 280  Q
    |||||||||||  ||||||||||||| |||||||||| | |||||| |||||||||||||| ||||| |||||||||| |||||||||||||| ||||||    
T  21501974 aatgccttgttg-ggttaaatgcgatatttgtcgcacgagttgatgttagttgatcttggaagttagaaaactaagttgtttatcttgctgttgttgttt 21502072  T
Q  281 cagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||||||||| ||||  ||| ||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  21502073 cagtaagcctgaattaatatgatctaatgttgttgttaatgttatataattgtatatacattacatgaat 21502142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22144540 - 22144378
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||| | ||||||||    ||||||| |||| ||||||||||||||| ||| ||| ||||||||||||| || ||||||||||||||    
T  22144540 tgatttcgtagttttgatccttaagttggtatttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacc 22144441  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||||| |||||||||| |||||||| ||||  |||||||||||||||||||||||||||||    
T  22144440 tggaataatttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggct 22144378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 19669389 - 19669094
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| |||| |||||||||| ||||||| ||||||||||||||   | ||||||||||| |    
T  19669389 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgt 19669290  T
Q  102 ggaatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    ||||    || ||||||||||||| || | ||| ||||||||||||||| ||| ||||||||| ||           |  | ||| ||| ||||||||||    
T  19669289 ggaaagactttagaatgaattttttgtgaattgtacctgaactcgccatggcgtgtagaggctctcgcctcaccagctaactagttacagaatgccttgt 19669190  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    ||||| |||||| |||  ||||||||||| ||||||  |||||||||| |||||||||||||||||  ||||||||| |||| ||||| |||||||    
T  19669189 ttaggataaatgtgattcttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagtcgtttatcttgttgttgttgttccagtaag 19669094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 1096956 - 1096795
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||| ||    
T  1096956 gatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatct 1096857  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||   ||  |||||||| |||||| | |   ||||||||||||||  |||||||||||||    
T  1096856 ggaaagattgcagaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggct 1096795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 21292613 - 21292717
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  21292613 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacct 21292712  T
Q  102 ggaat 106  Q
    |||||    
T  21292713 ggaat 21292717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 20026760 - 20026926
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||| || ||||||| || | ||||||||| | | ||||  |||||||||| ||||| |||||||||||| ||||||||| |||  |||||||    
T  20026760 aatgccttgtt-agcttaaatgtgaccgttgtcgcacgagtcgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgtagttgtttc 20026858  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||||||| |||| |||  | |||| ||||||  |||| |||||| |||||||||||||||||||||    
T  20026859 agtaagcctgaattatatgttttaatgttgttgataatgctatatagttgtatatacattacatgaat 20026926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 21985779 - 21985882
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  21985779 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 21985878  T
Q  102 ggaa 105  Q
    ||||    
T  21985879 ggaa 21985882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 23390128 - 23390293
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  23390128 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 23390227  T
Q  102 ggaatagtttaagaatg-aatttttggtagttgaacctgaactcgccatagcgagtagaggctatc 166  Q
    ||||   ||  |||||| || || ||| | |   ||||||||||||||| ||||||||||||||||    
T  23390228 ggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatc 23390293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 21871203 - 21871306
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||| || |||| ||||||||||| ||||   |||||||||||||    
T  21871203 gatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacct 21871302  T
Q  102 ggaa 105  Q
    ||||    
T  21871303 ggaa 21871306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 21875483 - 21875586
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||| || |||| ||||||||||| ||||   |||||||||||||    
T  21875483 gatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacct 21875582  T
Q  102 ggaa 105  Q
    ||||    
T  21875583 ggaa 21875586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 24529710 - 24529607
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  24529710 gatttcgtgattttgacttttgagttgatccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 24529611  T
Q  102 ggaa 105  Q
    ||||    
T  24529610 ggaa 24529607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 11580878 - 11580979
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||| ||||||| | |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||||||||||    
T  11580878 atttcgtgattttgacttttgagttgatccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 11580977  T
Q  103 ga 104  Q
    ||    
T  11580978 ga 11580979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 20026494 - 20026619
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| |||||| || | ||||||| |||| ||||||||||||||||||||||| |||||| ||| || || |||||||||||||     
T  20026494 tgattttgtagttttgacccttaagtcgatctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaaca 20026593  T
Q  101 tggaatagtttaagaatgaatttttg 126  Q
    ||| | ||||||| |||| |||||||    
T  20026594 tgggaaagtttaaaaatggatttttg 20026619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 36154469 - 36154562
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgga 104  Q
    |||||||| |||||||||| ||||||||| |||| ||||| ||||||||| ||||||| ||||||||||| |||| | ||||||||||||||||    
T  36154469 attttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctgga 36154562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 19660469 - 19660572
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||  | ||||||| |||||    
T  19660469 gattttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacct 19660568  T
Q  102 ggaa 105  Q
    ||||    
T  19660569 ggaa 19660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 191 - 347
Target Start/End: Original strand, 19660666 - 19660822
Alignment:
Q  191 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 290  Q
    |||||||| ||||| ||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| ||||||| ||    
T  19660666 tttaggttgaatgcaatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaagact 19660765  T
Q  291 aaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
     |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  19660766 gatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 19660822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 22075497 - 22075393
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| |||||| |||| ||||   ||| | |||||||    
T  22075497 gatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacct 22075398  T
Q  102 ggaat 106  Q
    |||||    
T  22075397 ggaat 22075393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 9078441 - 9078338
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| | ||| ||| |||| ||||||||||||||| ||||||| ||||||||| | |||| | |||||||||||||    
T  9078441 gatttcgtgattttgacttttgagttgatctttatatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacct 9078342  T
Q  102 ggaa 105  Q
    ||||    
T  9078341 ggaa 9078338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 22119834 - 22119928
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||||||    
T  22119834 attttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 22119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 22177794 - 22177900
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||||||||| |||||| |||| |||||||||| |||||||||||| |||||| ||| || || |||||| |||||||||  | ||||||| |||| |    
T  22177794 ttaagttgaaccctagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaacctgagaaagtttaaaaatgga 22177893  T
Q  121 tttttgg 127  Q
    |||||||    
T  22177894 tttttgg 22177900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 8286485 - 8286589
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||  ||||||| ||| ||||||||||||||||  ||| |||||| |||||||| ||||||| |||| |||||| ||||   |||||||||||||    
T  8286485 gatttcgtgtttttgacttttgagttgaaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacct 8286584  T
Q  102 ggaat 106  Q
    |||||    
T  8286585 ggaat 8286589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 13095983 - 13095880
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| |  |||||||||||| ||||||| ||||||||||| ||||   |||||||| ||||    
T  13095983 gatttcgtgattttgacttttgagttgatccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacct 13095884  T
Q  102 ggaa 105  Q
    ||||    
T  13095883 ggaa 13095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 24494057 - 24493954
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||| ||| |||| |  |||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  24494057 gatttcgtgattttgacttttgagttgatccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 24493958  T
Q  102 ggaa 105  Q
    ||||    
T  24493957 ggaa 24493954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 25431883 - 25431780
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| || |||| ||||||||||| | ||   |||||||| ||||    
T  25431883 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacct 25431784  T
Q  102 ggaa 105  Q
    ||||    
T  25431783 ggaa 25431780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 25422021 - 25421943
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaaga 80  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||||||    
T  25422021 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaaga 25421943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 349
Target Start/End: Original strand, 22178064 - 22178205
Alignment:
Q  208 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 307  Q
    ||||||| ||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| ||||| |||||||||||| |||||||| ||| ||   ||    
T  22178064 ctttgtcacacgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaaacctaaattatatgattggat 22178163  T
Q  308 attgttgcgaatgttatataattgtatatacattacatgaat 349  Q
     |||||   ||||| |||||| ||||||| ||||||||||||    
T  22178164 gttgttaataatgtgatataaatgtatatgcattacatgaat 22178205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 22107017 - 22107116
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||| ||||||| ||| |||||||| |||||||  ||| ||||||||||||||| ||||| | ||||||||||| ||||    |||||||||||||    
T  22107017 atttcgtatttttgacttttgagttgaactttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctg 22107116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 22120013 - 22120049
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||||||||||||||    
T  22120013 aatgccttgtttaggttaaatgcgatctttgtcgcac 22120049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 13025799 - 13025696
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||  ||| |||||| ||||||||  |||| |  |||||||||||| ||||||| ||||||||||| ||||   |||||||| ||||    
T  13025799 gatttcgtgattttgaattttgagttgatccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacct 13025700  T
Q  102 ggaa 105  Q
    ||||    
T  13025699 ggaa 13025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 24766969 - 24767072
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||| ||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | |||| |||||| ||||   |||||||||| ||    
T  24766969 gatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatct 24767068  T
Q  102 ggaa 105  Q
    ||||    
T  24767069 ggaa 24767072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 37724384 - 37724337
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  37724384 gtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 37724337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 24767157 - 24767193
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||| ||||||||||||||    
T  24767157 aatgccttgtttaggttaaatgtgatctttgtcgcac 24767193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 23201845 - 23201802
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  23201845 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 23201802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 26732421 - 26732487
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| |||| ||||||||||||||||||| ||| |||||| ||| || || ||||| |||||||    
T  26732421 ttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaac 26732487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 26740234 - 26740300
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| |||| ||||||||||||||||||| ||| |||||| ||| || || ||||| |||||||    
T  26740234 ttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaac 26740300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Complemental strand, 36314715 - 36314685
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  36314715 aatgttatataattgtatatacattacatga 36314685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 17918796 - 17918845
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||| ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  17918796 attttgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 17918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 21741487 - 21741528
Alignment:
Q  317 aatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    |||||||||||||||||||||||||| |||||| ||| ||||    
T  21741487 aatgttatataattgtatatacattatatgaattatgttgat 21741528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 18769647 - 18769687
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| |||||||||||||||||||| |||| |||||||    
T  18769647 ttttgacttttaagttgaaccttagatgcttttgagtgcct 18769687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 21329582 - 21329618
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  21329582 tgcatgagtcggtctaagttgattaagatgatgatgt 21329618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 21366305 - 21366349
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  21366305 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 21366349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 163
Target Start/End: Original strand, 21501919 - 21501947
Alignment:
Q  135 acctgaactcgccatagcgagtagaggct 163  Q
    |||||||||||||||||||||||||||||    
T  21501919 acctgaactcgccatagcgagtagaggct 21501947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 21502241 - 21502277
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  21502241 tgcatgagtcggtctaagttgattaagatgatgatgt 21502277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 21887300 - 21887260
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  21887300 ttttgacttttgagttgaaccttagatgtttttgagtgcct 21887260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 14234980 - 14234622
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||| || ||||||||||||||    
T  14234980 tgatttcataattttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacc 14234881  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgt 191  Q
     | ||||||| |||||||||||||||| ||||| ||||||||||||||| ||||||||||||  ||           |  ||||| ||| ||||||||||    
T  14234880 cgaaatagtt-aagaatgaatttttgggagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttacagaatgccttgt 14234782  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgt--ttcagtaagcc 289  Q
    |||||||||||| ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||    
T  14234781 ttaggttaaatgtgatctttgtcgaacaagttgatgttagttgatcttggaggttagaaactaagttatttatcttgttgttgttgttgttcagtaagcc 14234682  T
Q  290 taaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    | |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  14234681 tgaattgtttaatctaatgttgttgctaatgttatataattgtatatacattacatgaat 14234622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 15471414 - 15471059
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| || |||||||||||||| | ||| ||||||||||    
T  15471414 tgatttcgtaattttgacctttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacc 15471315  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgt 191  Q
    |||||||||||||||| |||||||  | ||||  ||||||||||||||| ||||||||||||  ||           || ||||| ||| ||||| ||||    
T  15471314 tggaatagtttaagaacgaattttgag-agttacacctgaactcgccatggcgagtagaggccctcgcctcgtgaactgcccagttacagaatgctttgt 15471216  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||||||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||     
T  15471215 ttaggttaaatgcgatctttgtcgcacgagttgatgttagatgatcttggaggttagaaactaagttgtttatcttgttgttgttgtttcagtaagcctg 15471116  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| ||||||  ||||||  |||||||||||||||||||||||||||||||||    
T  15471115 aattatatgatctaa-gttgttgttaatgttatataattgtatatacattacatgaat 15471059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 1465040 - 1465406
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||| || || |||| ||||||||||| ||||||||||||||    
T  1465040 tgattttgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacc 1465139  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    ||||||| |||||||| |||||| ||  ||||| ||||||||| ||||| ||||||||||||| ||           |  ||||| ||| ||||||||||    
T  1465140 tggaataatttaagaacgaatttgtgtgagttgcacctgaacttgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgt 1465239  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||| |  ||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||| |||| || | |  || ||||||||||     
T  1465240 ttaggttaaaagtaatctttgtcgcacgagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatgctgtcattccagtaagcctg 1465339  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
     ||||| || |||||| ||| ||  ||||||||| ||||||||||||||||||||||| ||| ||||    
T  1465340 gattgtttattctaatgttgatgataatgttatacaattgtatatacattacatgaattatgttgat 1465406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 349
Target Start/End: Complemental strand, 16097819 - 16097463
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| ||||| |||||||| |||| |||||||||| |||||||||||||||||||||| | | |||||||||||||    
T  16097819 gatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacct 16097720  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    | ||   ||| ||||||||||||||  | ||| ||||||||||||||| | ||||||||||| ||           |  | ||| ||| |||| ||||||    
T  16097719 gaaaagattttagaatgaatttttgtgaattggacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacaaaatgtcttgtt 16097620  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    || ||||||||||||||||||||||| | ||||||  |||||||||| ||| |||||||||||||| |||||||||||||| ||||| ||||||| || |    
T  16097619 tatgttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagagattagaaactaagttgtttatcttgctgttgttgttccagtaagactga 16097520  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
        ||| |  | || |||||   |||||||||||||||||||||||||||||||||    
T  16097519 tgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaat 16097463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 279
Target Start/End: Complemental strand, 32308157 - 32307872
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| ||||||||| |||| ||||||||||||| | ||||||| |||||||||||||| | | |||||||||||||    
T  32308157 gatttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacct 32308058  T
Q  102 -ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgcct 188  Q
     |||| | |||| ||||||||||| || | | ||||||||||||||||| ||||| ||||||| ||             ||||   || |||||||||||    
T  32308057 aggaagacttta-gaatgaattttgggaact-gaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacataatgcct 32307963  T
Q  189 tgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 279  Q
    |||||||||||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  32307962 tgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgtt 32307872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 349
Target Start/End: Original strand, 49389276 - 49389616
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  49389276 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 49389375  T
Q  102 gga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctttgtccagtcacataatgccttgtttaggttaa 200  Q
    ||| | | ||| |||||||| |||||  |  |||||||||||||||||| ||||| |||||      || ||   || || | | |||||||||||||||    
T  49389376 ggagagacttt-agaatgaa-ttttgtgaactgaacctgaactcgccatggcgagcagagg------ttctcgcctcgcagactaccttgtttaggttaa 49389467  T
Q  201 atgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtata 300  Q
    |||||||| ||||||||| | ||||||   ||||||||| |||||||||||||||||| ||||||||| |||| ||||| ||||||| || |    |||     
T  49389468 atgcgatccttgtcgcacgagttgatgtgtgttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttccagtaagactgatgcatatg 49389567  T
Q  301 atctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |  | || |||||   |||||||||||||||||||||||||| ||||||    
T  49389568 aattgatgttgtttataatgttatataattgtatatacattaaatgaat 49389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 2050832 - 2050992
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| || ||||||||||||||    
T  2050832 tgattttgtagttttgacccttaagttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc 2050931  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
      |||||||||||||||| |||||||| ||||  |||||||||| ||||||||||||||||||    
T  2050932 --gaatagtttaagaatggatttttgggagttacacctgaactctccatagcgagtagaggct 2050992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 324705 - 324563
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    ||||||||||| ||||||| |||| |||||||||| |||||||||||| |||||||||||||||| | |||||||||||   ||||||||||||||||||    
T  324705 ttaagttgaactttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatgaa 324606  T
Q  121 tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||||| ||||| |||||||||||||||||||||||||||||    
T  324605 tttttgggagttgcacctgaactcgccatagcgagtagaggct 324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 12933942 - 12934236
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||  | | |||||||||||||    
T  12933942 gatttcgtacttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacct 12934041  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||   ||| |||||||| |||||  |  |||||||||||||||||| ||||| |||| || ||          |  |   || ||| | | |||||||    
T  12934042 ggaaagattttagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagagactctcgcctcgcgagtacttgtgttacagacttccttgtt 12934141  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||||||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  12934142 taggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttccagtaag 12934236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 49667716 - 49668009
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||| ||||||||||||| | | |||||||||||| ||||||| |||||||||||||  | | |||||||||||||    
T  49667716 gatttcgtacttttgacttttgagttgatccttagatgttttga-gcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacct 49667814  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgcctt 189  Q
    ||||   ||| |||||||| | |||  |  |||||||||||||||||| ||||| ||||||| ||             ||||   || ||| | ||||||    
T  49667815 ggaaagattttagaatgaaatattgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacagactgcctt 49667911  T
Q  190 gtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    ||||||||||||| ||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  49667912 gtttaggttaaatacgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttccagtaag 49668009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 52523390 - 52523519
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttggtagtt 132  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||||||| ||  |||| ||||||||||||| |||||||||||| |||||||| ||||    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatggatttttgggagtt 52523489  T
Q  133 gaacctgaactcgccatagcgagtagaggc 162  Q
      ||||||||||||||||||||||||||||    
T  52523490 acacctgaactcgccatagcgagtagaggc 52523519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 1644315 - 1644608
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||| ||||||||| ||||||||||||||| | ||||| |||||||||||||  | | |||||||||||||    
T  1644315 gatttcgtaattttgacttttgagttgatccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacct 1644414  T
Q  102 g-gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgcct 188  Q
    | ||| | |||| |||||||||||  | | | ||||||||||||||||| ||||| ||||||| ||             ||||   || ||| | |||||    
T  1644415 gagaagacttta-gaatgaattttgtgaact-gaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacaaactgcct 1644509  T
Q  189 tgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||||| ||||||||||||| ||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||||||||| |||||||    
T  1644510 tgtttaagttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttattgttccagtaag 1644608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 53070331 - 53070491
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  53070331 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacct 53070430  T
Q  102 ggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||| ||  ||||||||||| ||||||| || || ||||||||||||||| |||||||||||||    
T  53070431 ggatta-attaagaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggct 53070491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 9513399 - 9513104
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| | ||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| |||||||||||||  | | |||||||||||||    
T  9513399 gatttcgtactattgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacct 9513300  T
Q  102 ggaatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    | ||   ||| |||||||| |||| || |  | ||||||||||| |||| ||||| ||||||| ||         ||  |   || ||| |||||||||     
T  9513299 gaaaagattttagaatgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcgagattacttgtgttacagaatgccttgc 9513200  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    ||| ||||||||||||||||||||||||| || |||  |||| ||||| |||||||||||||||||| |||| |||| |||||||||| |||||||    
T  9513199 ttatgttaaatgcgatctttgtcgcacaagtttatgtgagttaatcttagaggttagaaactaagttgtttaccttgttgttattgttccagtaag 9513104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 9521374 - 9521079
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| | ||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| |||||||||||||  | | |||||||||||||    
T  9521374 gatttcgtactattgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacct 9521275  T
Q  102 ggaatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    | ||   ||| |||||||| |||| || |  | ||||||||||| |||| ||||| ||||||| ||         ||  |   || ||| |||||||||     
T  9521274 gaaaagattttagaatgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcgagattacttgtgttacagaatgccttgc 9521175  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    ||| ||||||||||||||||||||||||| || |||  |||| ||||| |||||||||||||||||| |||| |||| |||||||||| |||||||    
T  9521174 ttatgttaaatgcgatctttgtcgcacaagtttatgtgagttaatcttagaggttagaaactaagttgtttaccttgttgttattgttccagtaag 9521079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 349
Target Start/End: Complemental strand, 16104268 - 16103914
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| ||| |||||| |||||||||||| | ||||||||||||||| ||||||| |||||||||||||| | | |||| |||||||||    
T  16104268 atttcgtaattttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctg 16104169  T
Q  103 -gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc------tttgtccag---tcacataatgccttgtt 192  Q
     ||| | |||| || ||||||||  | | ||||| | ||||||| | | ||||| ||||||| ||      |  || | |   | ||| | |||||||||    
T  16104168 ggaagacttta-gattgaattttgtgaa-ttgaatccgaactcgtcgtggcgagcagaggctctcgcctcgtgagtactggtgttacagactgccttgtt 16104071  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    ||||||||||||| |||||||||||| | ||||||  |||| ||||| |||||||||||||||||| |||||||||||||| ||||| ||||||| ||||    
T  16104070 taggttaaatgcgctctttgtcgcacgagttgatgtgagttaatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactaa 16103971  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
        ||| |  | || |||||   |||||||||||||| ||||||||||| ||||||    
T  16103970 tccatatgaattgatgttgtttataatgttatataattttatatacattaaatgaat 16103914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 17247918 - 17248079
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  17247918 gatttcgtgattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 17248017  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||   ||| ||||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  17248018 ggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 17248079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 42386895 - 42386739
Alignment:
Q  7 cgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaat 106  Q
    |||| ||||||||||||||||||||||||| ||||| | ||||| |||||||| |||||||| |||||| |||| | || | || ||||||||||| |||    
T  42386895 cgtagttttgacctttaagttgaaccttagttgtttatgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctgaaat 42386796  T
Q  107 agtttaagaatg-aatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || ||||||||| || |||||| ||||  ||||||||||||||| |||||||||||||    
T  42386795 ag-ttaagaatgaaacttttgggagttatacctgaactcgccatggcgagtagaggct 42386739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 18439023 - 18438920
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||||| |||||||||||||    
T  18439023 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacct 18438924  T
Q  102 ggaa 105  Q
    ||||    
T  18438923 ggaa 18438920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 14179811 - 14179708
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||||||| |    
T  14179811 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaactt 14179712  T
Q  102 ggaa 105  Q
    ||||    
T  14179711 ggaa 14179708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 40213353 - 40213514
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| | ||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  40213353 gatttcgtgattttgacttttgagttgatcattagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 40213452  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||   ||  |||||||| |||||| | |  |||||||||||||||  ||||| |||||||    
T  40213453 ggaaagattgtagaatgaacttttgggaatctaacctgaactcgccacggcgagcagaggct 40213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 249
Target Start/End: Original strand, 12171750 - 12171992
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||             ||||||    
T  12171750 atttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattg-------------aacctg 12171836  T
Q  103 ga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    || | | |||| |||||||||||||  |  |||||||||||| ||||| ||||||||||||| ||         | |  | ||| ||| |||||||||||    
T  12171837 gagagacttta-gaatgaatttttgtgaactgaacctgaactggccatggcgagtagaggctctcgcctcgcgatctaactagttacagaatgccttgtt 12171935  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttaga 249  Q
    |||||||||||||||  ||||||||||| ||||||  |||||||||| |||||||||    
T  12171936 taggttaaatgcgattcttgtcgcacaagttgatgtgagttgatcttagaggttaga 12171992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 13210148 - 13210240
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgtta 274  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||  |||||||| | |||||||||||||||||| ||||||||| |||||    
T  13210148 aatgccttgtttaggttaaatgtgatctttgtcgcacgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgttgtta 13210240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 20698079 - 20698183
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| ||| |||||||||||||||| |||| |||| |||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  20698079 gattttgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 20698178  T
Q  102 ggaat 106  Q
    |||||    
T  20698179 ggaat 20698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 11424395 - 11424498
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||| | |||| | |||||||||||||    
T  11424395 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacct 11424494  T
Q  102 ggaa 105  Q
    ||||    
T  11424495 ggaa 11424498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 605942 - 606048
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    ||||||||||||||||||| |||| ||||||||||  ||||||||||| |||||| ||  || || ||||||||||||||||||| ||||||| |||| |    
T  605942 ttaagttgaaccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaaaagtttaaaaatgga 606041  T
Q  121 tttttgg 127  Q
    |||||||    
T  606042 tttttgg 606048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 23275211 - 23275106
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||| |||||| ||| || || ||||||||||||| ||| | ||||||| |||| |    
T  23275211 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatgga 23275112  T
Q  121 tttttg 126  Q
    ||||||    
T  23275111 tttttg 23275106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 37250996 - 37251153
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||| | || ||||||||||| | ||||||  |||||||||||| ||| |||||||||||| |||||||| ||||| ||||| ||||||| ||     
T  37250996 ttaggttaaaagtgacctttgtcgcacgagttgatgtgagttgatcttgggggtaagaaactaagttgtttatcttactgttgttgttccagtaagtctg 37251095  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  37251096 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 37251153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 12340241 - 12340138
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||    
T  12340241 gatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 12340142  T
Q  102 ggaa 105  Q
    ||||    
T  12340141 ggaa 12340138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 26687376 - 26687273
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||| ||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  26687376 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 26687277  T
Q  102 ggaa 105  Q
    ||||    
T  26687276 ggaa 26687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 14973343 - 14973245
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||| ||||    
T  14973343 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacc 14973245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 23412815 - 23412929
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    ||||| || ||||||||||||||||||| |||| |||||||||| |||||||| ||| |||||| ||| || || |||||||||| |||||| | |||||    
T  23412815 ttttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataaaaatgattaggcaagtttttagattgagattggacctgggaaagttt 23412914  T
Q  112 aagaatgaatttttg 126  Q
    || |||| |||||||    
T  23412915 aaaaatggatttttg 23412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 14501669 - 14501564
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||| |||||| ||| || || |||||||||| |||||| |  |||||| |||| |    
T  14501669 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaaggttttagattgagattggacctgggaaggtttaaaaatgga 14501570  T
Q  121 tttttg 126  Q
    ||||||    
T  14501569 tttttg 14501564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 105
Target Start/End: Complemental strand, 14573067 - 14572974
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    ||||||| ||| |||||| |||||||||  ||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||||||    
T  14573067 ttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 14572974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 22109926 - 22110007
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||| || ||  |||||||||||||||    
T  22109926 ttaagttgaactttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 12399684 - 12399608
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaa 78  Q
    ||||| ||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| |||||||||    
T  12399684 gattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaa 12399608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 13209960 - 13210062
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||| ||||||| |||| || |||||||||||  ||| | |||||||||||||    
T  13209960 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtagaatgagattgaacct 13210058  T
Q  102 ggaa 105  Q
    ||||    
T  13210059 ggaa 13210062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 14669249 - 14669146
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||||||||||||||  || ||||||||||||||| ||||| | | ||||||||| ||||   |||||||||||||    
T  14669249 gatttcgtgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacct 14669150  T
Q  102 ggaa 105  Q
    ||||    
T  14669149 ggaa 14669146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 17247152 - 17247235
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgta 85  Q
    |||||||| |||||||| ||| |||||| |||||||||||||| |||||| |||||||| ||||||| ||||||||||| ||||    
T  17247152 gatttcgtgattttgacttttgagttgatccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgta 17247235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 25476017 - 25476120
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||| |||||| |||||||||||||| ||| ||||||||||| ||||||| |||| |||||| |||| | |||||| ||||||    
T  25476017 gattttgtgattttgacttttgagttgatccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacct 25476116  T
Q  102 ggaa 105  Q
    ||||    
T  25476117 ggaa 25476120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 43927650 - 43927544
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| |||| ||||||||||||||||||||||| |||||  ||| || || |||||| |||||||||| | ||||||| |||| |    
T  43927650 ttaagtcgaactttagatgattttgagtgcctgaacatgtataataatgattagacaagtttttagattgagtttgaacctgggaaagtttaaaaatgga 43927551  T
Q  121 tttttgg 127  Q
    |||||||    
T  43927550 tttttgg 43927544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 22110180 - 22110337
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||||| |||| || ||||||||||| | ||||||  |||||||| ||  ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  22110180 ttaggtttaatgtgacctttgtcgcacgaattgatgtgagttgatcatgagggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 22110279  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||||||| || | |  |||||   ||||| |||||| ||||||  ||||||||||||    
T  22110280 aattgtatgatttgaagttgttaataatgtgatataaatgtatacgcattacatgaat 22110337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 45797713 - 45797608
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    ||||||||||| ||||||| |||| |||||||||| |||||||||||| |||||| ||| || || |||||||||| |||||| |  |||||| |||| |    
T  45797713 ttaagttgaactttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctgggaaggtttaaaaatgga 45797614  T
Q  121 tttttg 126  Q
    ||||||    
T  45797613 tttttg 45797608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 30030317 - 30030213
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||||| |||||| ||| ||||||||||||||||  ||| |||| |||||||||| ||||||| |||| |||||| |||    |||||||||||||    
T  30030317 gatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacct 30030218  T
Q  102 ggaat 106  Q
    |||||    
T  30030217 ggaat 30030213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 12378459 - 12378360
Alignment:
Q  28 gaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    |||||||||||| |||| |||||||||| ||||| |||||| |||||| | | || || ||||||||||||||||| | ||||||| |||| ||||||||    
T  12378459 gaaccttagatgattttgagtgcctgaatatgtacaataatgattaggcatgtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12378360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 14576465 - 14576568
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| |||||||||  ||| ||||||||||||||| |||| || ||||| ||||| |||| | ||| |||||||||    
T  14576465 gatttcgtgattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacct 14576564  T
Q  102 ggaa 105  Q
    ||||    
T  14576565 ggaa 14576568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 17488346 - 17488243
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| | |||||| ||| || ||| |||||||||  ||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  17488346 gatttcgtgaatttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 17488247  T
Q  102 ggaa 105  Q
    ||||    
T  17488246 ggaa 17488243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 17499828 - 17499725
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||||||| ||| || ||| |||||||||  ||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  17499828 gatttcatgattttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 17499729  T
Q  102 ggaa 105  Q
    ||||    
T  17499728 ggaa 17499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 43927425 - 43927322
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||| |||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  43927425 ttaggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 43927326  T
Q  292 aatt 295  Q
    ||||    
T  43927325 aatt 43927322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 4588457 - 4588547
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | ||||||||||| ||||   ||||||||||||||    
T  4588457 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctg 4588547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 14666085 - 14665991
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||||||| ||| |||||||||||||||||  || ||||||||||||||  ||||| | ||||||||||| ||||   |||||||||||||||||    
T  14666085 attttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaa 14665991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 14735598 - 14735504
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||||||| ||| |||||||||||||||||  || ||||||||||||||  ||||| | ||||||||||| ||||   |||||||||||||||||    
T  14735598 attttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaa 14735504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 37250763 - 37250869
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || | |||  |||||||||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| |    
T  37250763 ttaagtcgaactttagatgattctgagtatctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgga 37250862  T
Q  121 tttttgg 127  Q
    |||||||    
T  37250863 tttttgg 37250869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 43842667 - 43842584
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgta 85  Q
    |||||| | |||||||| ||| |||||| ||||||||| |||| ||||||||| ||||| ||||||| ||||||||||| ||||    
T  43842667 gatttcatgattttgactttttagttgatccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgta 43842584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 316666 - 316592
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagatt 95  Q
    |||||| |||| |||||||||||| |||||||||| |||||||||||| |||||| ||| || || |||||||||    
T  316666 ttaagtcgaactttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagatt 316592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 15877461 - 15877514
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  15877461 gatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 15877514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 12340057 - 12340017
Alignment:
Q  178 acataatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  12340057 acataatgccttgtttaggttaaatgtgatctttgtcgcac 12340017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 14665906 - 14665870
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||||||||||||||    
T  14665906 aatgccttgtttaggttaaatgcgatctttgtcgcac 14665870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 14735419 - 14735383
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||||||||||||||    
T  14735419 aatgccttgtttaggttaaatgcgatctttgtcgcac 14735383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 21837958 - 21837866
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaattttt 125  Q
    ||||||| |||| |||| ||||| |||||||||||| |||||| ||| || || ||||||||||||| ||| | ||||||| |||| ||||||    
T  21837958 ttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggattttt 21837866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 12851996 - 12852099
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||| ||| |||||||   || ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||| ||    
T  12851996 gatttcgtgattttgacttttgagtttaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatct 12852095  T
Q  102 ggaa 105  Q
    ||||    
T  12852096 ggaa 12852099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 16809874 - 16809774
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||| ||| |||| ||||| |||||    |||||||| ||||||||||| ||||   ||||||||| |||    
T  16809874 gatttcgtatttttgacttttgagttgaaccttaaatgcttttgagtgcttgaac----ataataatgattaggaaagaatgtaggatgagattgatcct 16809779  T
Q  102 ggaat 106  Q
    |||||    
T  16809778 ggaat 16809774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 17674209 - 17674258
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||||||||||||||| ||| |||||||||||||||| |||| |||||||    
T  17674209 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 17674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22791788 - 22791727
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtat 62  Q
    |||||| ||| || |||||||||||| ||||||||||||||||| |||| |||||| |||||    
T  22791788 tgattttgtagttatgacctttaagtcgaaccttagatgtttttgagtgtctgaacttgtat 22791727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 4588608 - 4588644
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4588608 aatgccttgtttaggttaaatgcgagctttgtcgcac 4588644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 13442724 - 13442660
Alignment:
Q  41 ttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||| ||||||||||||||| ||||||| ||||||||| | ||||   |||||||||||||||||    
T  13442724 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaa 13442660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 14669061 - 14669025
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    ||||||||||||||||||||| |||||||||||||||    
T  14669061 aatgccttgtttaggttaaattcgatctttgtcgcac 14669025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 23082993 - 23083155
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||| |||||| ||||||||| |||| |||||||| | |||| ||||| | ||||||| | | ||||   |||||||| ||||    
T  23082993 gattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtaggatgagattggacct 23083092  T
Q  102 ggaatagtttaagaatgaa--tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||| || || ||||||||  |||||||    ||| ||| |||||||||| |||||||||||||    
T  23083093 ggaa-agatttagaatgaaactttttggattctgacccttaactcgccatggcgagtagaggct 23083155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 23052719 - 23052762
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctga 54  Q
    |||||||||| | ||||||||||||||||||||| |||||||||    
T  23052719 attttgacctgtgagttgaaccttagatgtttttgagtgcctga 23052762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 9578136 - 9578070
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    |||||||  ||| ||||||||||||||||| ||||| |||||| |||||| || ||||| |||||||    
T  9578136 ttagatgactttgagtgcctgaacatgtatgataatgattaggcaagattttagattgaaattgaac 9578070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Original strand, 12174216 - 12174246
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  12174216 aatgttatataattgtatatacattacatga 12174246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Original strand, 13210284 - 13210314
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  13210284 aatgttatataattgtatatacattacatga 13210314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 16369887 - 16369845
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgc 50  Q
    ||||||||||||||| |||||||||||||||| |||| |||||    
T  16369887 gtaattttgacctttgagttgaaccttagatgcttttgagtgc 16369845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 3402600 - 3402649
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||| ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  3402600 attttgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 3402649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 11852055 - 11852006
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||||| || ||| |||||||||||||||| |||| |||||||    
T  11852055 atttcgtaattttaacttttcagttgaaccttagatgcttttgagtgcct 11852006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 12037586 - 12037639
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||| |||||||| | | |||| |||||||||||||||| ||||||||||    
T  12037586 gatttcgtgattttgacatgtgagttaaaccttagatgtttttgagtgcctgaa 12037639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 321657 - 321697
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  321657 ttttgacttttgagttgaaccttagatgtttttgagtgcct 321697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 12173261 - 12173221
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  12173261 ttttgacttttgagttgaaccttagatgtttttgagtgcct 12173221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 12496734 - 12496690
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  12496734 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 12496690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 15060771 - 15060727
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  15060771 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 15060727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 17524817 - 17524857
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  17524817 ttttgacttttgagttgaaccttagatgtttttgagtgcct 17524857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 18383556 - 18383600
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  18383556 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 18383600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 182; Significance: 3e-98; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 13430 - 13074
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| || |||||||||||||| | ||| ||||||||||    
T  13430 tgatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacc 13331  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||  ||           |  ||||| ||| |||||||||     
T  13330 tggaatagtttaagaatgaatttttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttg- 13232  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| |||||||||| ||| | ||||||  |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||     
T  13231 ttaggttaaatgtgatctttgtcacacgagttgatgtgagttgatcatggagattagaaactaagttatttatcttgctgttgttgtttcagtaagcctg 13132  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  13131 aattggataatctaatgttgttgctaatgttatataattgtatatacattacacgaat 13074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 18066 - 18223
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  || ||||| ||| ||| ||||||||||||  ||||||  ||||| ||||||||||||||||     
T  18066 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatctcactgttgttgtttcagtaagcctg 18165  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| |||  | | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  18166 aattatatgttttgatgttgttattaatgtgatataaatgtatatgcattacatgaat 18223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 181; Significance: 1e-97; HSPs: 2)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 659 - 1020
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattga--- 97  Q
    ||||||||||  |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||       
T  659 tgatttcgtagatttgacctttaagttgaatcttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattgagat 758  T
Q  98 ---acctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatg 185  Q
       ||||| ||||||||||| ||| |||||  | ||||| ||||||||||||| ||||||||||||||  ||          ||  ||||| ||||||||    
T  759 tgaacctgtaatagtttaaggatggattttgtg-agttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatg 857  T
Q  186 ccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagta 285  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||    
T  858 ccttgtttaggttaaatgcgatctttgtcgcgcaagttgatgttagttgatcttggaagttagaaactaagttatttatcttgttgttgttgtttcagta 957  T
Q  286 agcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||| ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  958 agcctgaattgta-aatctaatgttgttgctaatgttatataattgtatatacattacatgaat 1020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 1119 - 1155
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  1119 tgcatgagtcggtctaagttgattaagatgatgatgt 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 2e-96; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 6520858 - 6520493
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||| | ||| ||| ||||||    
T  6520858 tgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacc 6520759  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgt 191  Q
    || ||||||||||||||| |||||||  ||||  ||||||| ||||||| ||||||||||||  ||           || ||| | ||| ||||| ||||    
T  6520758 tgaaatagtttaagaatggatttttgagagttagacctgaattcgccatggcgagtagaggccctcgcctcgcaaactgcccaattacagaatgctttgt 6520659  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    | |||||||||||||||||||| |||  | ||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  6520658 t-aggttaaatgcgatctttgttgcatgagttgatgtgagttgatcttggaggttagaaactaagttatttatcttgctgttgttgtttcagtaagcctg 6520560  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  6520559 aattgtataatctaatgttgttgctaatgttatataattgtatatacattacatgaattatgttgat 6520493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 38854882 - 38855247
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | ||| ||||| ||||    
T  38854882 tgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacc 38854981  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgt 191  Q
    |||||||||||||||| |||||||  | ||||  ||||||||||||||| ||||||||||||  ||          ||| ||||| ||| |||||||||     
T  38854982 tggaatagtttaagaacgaattttgag-agttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgcccagttacagaatgccttgc 38855080  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||||||||  ||||||||||||||| | ||||||  | |||||||||||  |||| ||||||||| |||||||||||||| ||||||||||||||||     
T  38855081 ttaggttaaacacgatctttgtcgcacgagttgatgtgaattgatcttggacattaggaactaagttgtttatcttgctgttgttgtttcagtaagcctg 38855180  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||| ||| ||||    
T  38855181 aattgtataatctaatgttgttgctaatgttatataattgtatatacattatatgaattatgttgat 38855247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 342
Target Start/End: Complemental strand, 21674194 - 21673845
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||| || |||||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  21674194 gatttcgtaattttgacttttgagttgatccttggacgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 21674095  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||   ||| ||||||||| ||||  ||||| ||||||||||||||| ||||||||||||  ||          ||| |  || ||| |||||||||||    
T  21674094 ggaaagattttagaatgaatatttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgacttgttacagaatgccttgtt 21673995  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    |||| ||||||||||||||||||||||| || |||  ||||||| || ||||||| ||||||||||  |||||||| |||| |||||||||||||| | |    
T  21673994 taggataaatgcgatctttgtcgcacaagttaatgtgagttgatattagaggttaaaaactaagtt-gttatcttgttgttgttgtttcagtaagcttga 21673896  T
Q  293 att-gtataatctaatattgttgcgaatgttatataattgtatatacatta 342  Q
    |||  ||| ||||||| ||||||  |||| |||||||||||||||||||||    
T  21673895 attaatatgatctaatgttgttgttaatggtatataattgtatatacatta 21673845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 279
Target Start/End: Original strand, 26355330 - 26355616
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| ||||| |||||||| ||||||||||||||| ||||||| ||||||| |||||| | |||||||||||||||    
T  26355330 gatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacct 26355429  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||    || ||||||||||||||  | ||| ||||||||| ||||| ||||||||||||| ||           |  | ||| ||| |||||||||||    
T  26355430 ggaaagactttagaatgaatttttgtgaattgtacctgaacttgccatggcgagtagaggctctcgcctcacgagctaactagttacagaatgccttgtt 26355529  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 279  Q
    || ||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||||||||| ||||||||  ||||||||||    
T  26355530 tatgttaaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtttatctttttgttattgtt 26355616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 39834322 - 39834160
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||| ||||||| ||| ||||| ||||| |||||||||||||||| ||||||||||||||    
T  39834322 tgattttgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacc 39834223  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||||||||||||||||||| ||||  ||||| ||||||||||||||| |||||||||||||    
T  39834222 tggaatagtttaagaatgaatctttgtgagttgcacctgaactcgccatggcgagtagaggct 39834160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 100 - 348
Target Start/End: Complemental strand, 21285989 - 21285733
Alignment:
Q  100 ctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttg 190  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||| || ||||||||||||  ||          ||| ||||| ||| ||||| |||    
T  21285989 ctggaatagtttaagaatgaatttttgggagttacacctgaactcgctatggcgagtagaggccctcgcctcgcaagttgcccagttacagaatgctttg 21285890  T
Q  191 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 290  Q
    || |||||||||||||||||| |||||| | ||||||  |||||||||| ||||| |||||||||||  ||||||||| |||| ||||||||||||||||    
T  21285889 tt-aggttaaatgcgatctttatcgcacgagttgatgtgagttgatcttagaggtaagaaactaagtgctttatcttgttgttgttgtttcagtaagcct 21285791  T
Q  291 aaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaa 348  Q
     |||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  21285790 gaattatataatctaatattgttgttaatgatatataattgtatatacattacatgaa 21285733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 7 - 358
Target Start/End: Original strand, 23760477 - 23760840
Alignment:
Q  7 cgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaat 106  Q
    |||||||||||| ||| |||||| || |  |||||||| ||| ||||||||||| ||||||| ||||||||| |||| | ||||||||||||||||||||    
T  23760477 cgtaattttgacttttgagttgatccctgaatgtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctggaat 23760576  T
Q  107 agtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtttaggt 197  Q
    |||||||||| ||| || ||| ||||  ||||||||| ||||  ||||||||||||  ||          ||| | ||| ||| ||||||||| |||||     
T  23760577 agtttaagaacgaacttgtgggagttatacctgaacttgccaaggcgagtagaggccctcgcctcgcgaattgactagttacaaaatgccttg-ttagga 23760675  T
Q  198 taaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttattta---tcttgctgttattgtttcagtaagcctaaat 294  Q
    ||||||||||||||||||||||| ||||||  |||||||||| ||||||| |||||||||| ||||   | ||| |||| |||||||||||||||| |||    
T  23760676 taaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggttaaaaactaagttgtttaccttgttgttgttgttgtttcagtaagcctgaat 23760775  T
Q  295 -tgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
       ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  23760776 aaatatgatctaatgttgttgttaatggtatataattgtatatacattatatgaattatgttgat 23760840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 161
Target Start/End: Original strand, 19801059 - 19801218
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| |||||||||  | | ||||||||||||||| ||||||| ||||||||||| |  | | | |||||||||||    
T  19801059 gatttcgtgattttgacttttgagttgatccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacct 19801158  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagagg 161  Q
    ||||||||||||||| ||| || ||| ||||  ||||||||||||||| |||||||||||    
T  19801159 ggaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgagtagagg 19801218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 21491481 - 21491382
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  21491481 gattttgtaattttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 21491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 5865909 - 5866009
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  5865909 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 5866008  T
Q  102 g 102  Q
    |    
T  5866009 g 5866009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20499150 - 20499024
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| || |||||||| ||||||| |||| ||||||||||||||||||||||| |||||| ||| || || ||||||||||||||    
T  20499150 tgattttgtagttttgacccttgagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacc 20499051  T
Q  101 tggaatagtttaagaatgaatttttgg 127  Q
    ||  | ||||||| |||| ||||||||    
T  20499050 tgagaaagtttaaaaatggatttttgg 20499024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 41598673 - 41598512
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||| ||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| |||| |||||| |||| | |||||||||||||    
T  41598673 gattccgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacct 41598574  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||   ||| ||||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  41598573 ggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 41598512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 45130663 - 45130767
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| | |||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  45130663 gatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 45130762  T
Q  102 ggaat 106  Q
    |||||    
T  45130763 ggaat 45130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 18878869 - 18878972
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  18878869 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 18878968  T
Q  102 ggaa 105  Q
    ||||    
T  18878969 ggaa 18878972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 7373237 - 7373135
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   ||| ||||||||||    
T  7373237 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctg 7373138  T
Q  103 gaa 105  Q
    |||    
T  7373137 gaa 7373135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 182 - 347
Target Start/End: Original strand, 5866097 - 5866261
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |    
T  5866097 aatgcctt-tttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcc 5866195  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  5866196 agtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 5866261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 13507653 - 13507765
Alignment:
Q  14 ttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaa 113  Q
    |||||| ||||||||||||||||||| |||| |||||||||| |||||||||||| |||||  ||| || || ||||||| ||||||||| | |||||||    
T  13507653 ttgacccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaa 13507752  T
Q  114 gaatgaatttttg 126  Q
     |||| |||||||    
T  13507753 aaatggatttttg 13507765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 13597185 - 13597297
Alignment:
Q  14 ttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaa 113  Q
    |||||| ||||||||||||||||||| |||| |||||||||| |||||||||||| |||||  ||| || || ||||||| ||||||||| | |||||||    
T  13597185 ttgacccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaa 13597284  T
Q  114 gaatgaatttttg 126  Q
     |||| |||||||    
T  13597285 aaatggatttttg 13597297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 17141402 - 17141302
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||| |||| || ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  17141402 gattttgtattttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 17141303  T
Q  102 g 102  Q
    |    
T  17141302 g 17141302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 6759746 - 6759643
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||| ||||||||| ||||||| ||||||||||| |||| | ||||||||||| |    
T  6759746 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaactt 6759647  T
Q  102 ggaa 105  Q
    ||||    
T  6759646 ggaa 6759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21286711 - 21286652
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgt 60  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21286711 tgatttcgtagttttgacccttaagttgaaccttagatgtttttaagtgcctgaacatgt 21286652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 21918642 - 21918745
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||||||||||||| |||  ||||||||||||||| ||||||| ||||| ||||| ||||    ||||||||||||    
T  21918642 gatttcgtaattttgacttttgagttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacct 21918741  T
Q  102 ggaa 105  Q
    ||||    
T  21918742 ggaa 21918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 22627224 - 22627125
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  22627224 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22627125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 23406870 - 23406767
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||| ||||    
T  23406870 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacct 23406771  T
Q  102 ggaa 105  Q
    ||||    
T  23406770 ggaa 23406767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 16091973 - 16092073
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||| ||||||||| ||||||| ||||||||||| |||| | ||||||| |||||    
T  16091973 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacct 16092072  T
Q  102 g 102  Q
    |    
T  16092073 g 16092073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 191 - 347
Target Start/End: Complemental strand, 17141206 - 17141050
Alignment:
Q  191 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 290  Q
    |||||||| |||||||||||||||   | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| ||||||| ||    
T  17141206 tttaggttgaatgcgatctttgtcattcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttccagtaagact 17141107  T
Q  291 aaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
     |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  17141106 gatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 17141050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 31971733 - 31971629
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||  ||||||| ||| |||||||||||||||| ||||  |||||||||||||| ||||||| ||||||||||  ||||   |||||||||||||    
T  31971733 gatttcgtgtttttgacttttgagttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacct 31971634  T
Q  102 ggaat 106  Q
    |||||    
T  31971633 ggaat 31971629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 982969 - 983083
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    |||||||||| ||||||||| ||||||| |||| |||| ||||||||||||| || | |||||||||| || || ||||||||||||||||  | |||||    
T  982969 ttttgacctt-aagttgaactttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctgagaaagttt 983067  T
Q  112 aagaatgaatttttgg 127  Q
    || |||| ||||||||    
T  983068 aaaaatggatttttgg 983083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 18818042 - 18818145
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||| | ||||   |||||||||||||    
T  18818042 gatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacct 18818141  T
Q  102 ggaa 105  Q
    ||||    
T  18818142 ggaa 18818145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 20536697 - 20536594
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||  |||||||||||||||| |||| ||||||||||||||| | ||||| ||||||||||| ||||   |||||||||||||    
T  20536697 gattttgtgattttgactttcgagttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacct 20536598  T
Q  102 ggaa 105  Q
    ||||    
T  20536597 ggaa 20536594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 21255708 - 21255605
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||| | ||||||| ||| |||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  21255708 gatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 21255609  T
Q  102 ggaa 105  Q
    ||||    
T  21255608 ggaa 21255605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 28648676 - 28648779
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| |||| |||||| ||||   ||||||||||| |    
T  28648676 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacat 28648775  T
Q  102 ggaa 105  Q
    ||||    
T  28648776 ggaa 28648779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 17266567 - 17266673
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| |||||||||||| |||||||||| |||||||||||| |||||| ||| || || |||||||||||||||   | ||||||| |||| |    
T  17266567 ttaagtcgaactttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctacgaaagtttaaaaatgga 17266666  T
Q  121 tttttgg 127  Q
    |||||||    
T  17266667 tttttgg 17266673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 349
Target Start/End: Original strand, 983248 - 983391
Alignment:
Q  209 tttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatc---ttgctgttattgtttcagtaagcctaaattgtataatcta 305  Q
    |||||||||| | |||||   ||||||||||||||||  ||||||||||| ||||||   ||| |||| ||||||||||||| || |||| ||| ||  |    
T  983248 tttgtcgcacgagttgatatgagttgatcttggaggtaggaaactaagttgtttatcatgttgttgttgttgtttcagtaagtctgaattatatgattga 983347  T
Q  306 atattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    || ||||||  |||||||||||  ||||||||||||||||||||    
T  983348 atgttgttgataatgttatatagctgtatatacattacatgaat 983391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 21414859 - 21414956
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| |||||| || ||| ||| ||||||||||||||||| |||||||||| ||| | | |||| |||||||||||||||| | |||||||||||    
T  21414859 gatttcggaatttttactttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 347
Target Start/End: Complemental strand, 21491293 - 21491129
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||| |||||||||||||| |  | | || |||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |    
T  21491293 aatgcctt-tttaggttgaatgcgatctttgtagttcgagttaatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcc 21491195  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    |||||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  21491194 agtaagactgatgcctatgaattaatgttgcttataatgttatataattgtatatacattacatga 21491129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 22875554 - 22875393
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||||||| |||| | ||||||||| |||| || | || ||||||| ||||||| |||||||||||||||| |  ||| ||||||||    
T  22875554 gatttcgtgattttgacctttgagttaatccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacct 22875455  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||   ||| ||||||||  ||||| | |   |||||||||||||||  |||| |||||||    
T  22875454 ggaaagattttagaatgaaactttgggaatctgacctgaactcgccatgacgagcagaggct 22875393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 16199290 - 16199394
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| ||||||||||| |||| |||| ||||||| ||||||| | ||||| ||||||||||| ||||   |||||||||||||    
T  16199290 gatttcgtatttttgacttttgagttgaaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 16199389  T
Q  102 ggaat 106  Q
     ||||    
T  16199390 agaat 16199394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 21249870 - 21249767
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||| | ||||||| ||| |||||||||||||||| |||| ||||||  ||||||| ||||||| ||||||||||| ||||   ||||| |||||||    
T  21249870 gatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacct 21249771  T
Q  102 ggaa 105  Q
    ||||    
T  21249770 ggaa 21249767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 24353570 - 24353464
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||  |||| |||||||||| |||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||  |||| |    
T  24353570 ttaagtcgaactttagataattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttataaatgga 24353471  T
Q  121 tttttgg 127  Q
    |||||||    
T  24353470 tttttgg 24353464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 25362793 - 25362887
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaat 106  Q
    ||||||| ||| ||||||||||||||||  ||| |||| |||||||||  ||||||| ||||||||||| ||||   ||||||||||||||||||    
T  25362793 ttttgacttttgagttgaaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctggaat 25362887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 17266821 - 17266978
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || |||| |||||| | ||||||  ||||||||  || ||| ||||||||||||  ||||||| ||||| |||||||||| |||||     
T  17266821 ttaggttaaatgtgacctttatcgcacgagttgatgtgagttgatcacgggggtaagaaactaagttgcttatcttactgttgttgtttcagtgagcctg 17266920  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||| ||||    
T  17266921 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacaagaat 17266978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 349
Target Start/End: Complemental strand, 20498839 - 20498698
Alignment:
Q  208 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 307  Q
    ||||||| ||| | ||||||  |||||||||||||||| |||||||||||| ||||||||| ||||  |||||| ||||| || |  | ||| || | ||    
T  20498839 ctttgtcacacgagttgatgtgagttgatcttggaggtaagaaactaagttgtttatcttgatgttgatgtttcggtaagactgatgtatatgatttgat 20498740  T
Q  308 attgttgcgaatgttatataattgtatatacattacatgaat 349  Q
     |||||   ||||| ||||||||||||||||||||| |||||    
T  20498739 gttgtttataatgtgatataattgtatatacattacttgaat 20498698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 22364954 - 22364797
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  ||||||||  || | | | ||||||||||  ||||||| ||||| ||||||||||||||||     
T  22364954 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcagggggataataaactaagttgcttatcttactgttgttgtttcagtaagcctg 22364855  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||   || || |||||| ||||||| ||||||||||||    
T  22364854 aattatatgatttgatgttgttaataaagtgatataaatgtatatgcattacatgaat 22364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 21923560 - 21923660
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||| |||||| ||||||||| |||| |||| |||||||||| ||||||| ||||||| ||| ||||   |||||||||||||    
T  21923560 gattttgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacct 21923659  T
Q  102 g 102  Q
    |    
T  21923660 g 21923660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 17439092 - 17439186
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||| |||| |||||||||| ||||| |||||| |||||| ||| || || |||| |||||||||||| | ||||||| |||| ||||||||    
T  17439092 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgggattgaacctgggaaagtttaaaaatggatttttgg 17439186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 23649032 - 23648942
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| ||| |||||| ||||||||| |||| |||| |||||||||| ||||||| ||||||||||| ||||   |||||||| |||||    
T  23649032 ttttgacttttgagttgatccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctg 23648942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 37116882 - 37116788
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||| |||| |||||||||| |||||||||||| |||||| ||| || || ||||||||||||||||  | ||| ||| |||| ||||||||    
T  37116882 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtataaaaatggatttttgg 37116788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 347
Target Start/End: Complemental strand, 21249682 - 21249519
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||||||||||||||||||||  ||| ||||||  |||| ||||| |||||||| |||||||||  ||| | |||||||| ||| ||    
T  21249682 aatgcctt-tttaggttaaatgcgatctttgtcgttcaagttgatgtgagtttatcttagaggttaggaactaagtt-gttaccctgctgttaatgtctc 21249585  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    | |||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  21249584 actaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 21249519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 37116641 - 37116484
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||| |||||| || |||||||| || | ||||||  || ||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  37116641 ttaggataaatgtgacctttgtcgtacgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 37116542  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    | ||  || || | || |||||   ||||| ||||| |||||||| ||||||||||||    
T  37116541 atttagatgatttgatgttgttaataatgtgatatatttgtatatgcattacatgaat 37116484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 40492438 - 40492533
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatga-atttttgg 127  Q
    ||||||| |||| |||||||||| |||||||| ||| |||||| ||| || || ||||||||||||||| | | ||||||| ||||| ||||||||    
T  40492438 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacctcggaaagtttaaaaatgagatttttgg 40492533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 24353316 - 24353156
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatct---tgctgttattgtttcagtaagc 288  Q
    ||||| |||||| || ||||||||||| | ||||||  |||||||| ||| | | ||||||||||||  ||||||   || |||| ||||||||||||||    
T  24353316 ttaggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatggggataagaaactaagttgcttatcttactgttgttgttgtttcagtaagc 24353217  T
Q  289 ctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    || |||| ||| || | || |||||   ||| | |||||| ||||||| ||||||||||||    
T  24353216 ctgaattatatgatttgatgttgttaataatatgatataaatgtatatgcattacatgaat 24353156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5610269 - 5610330
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtat 62  Q
    |||||| ||| || |||||||||||| ||||||||||||||||| |||| |||||| |||||    
T  5610269 tgattttgtagttatgacctttaagtcgaaccttagatgtttttgagtgtctgaacttgtat 5610330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 16409889 - 16409938
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||||||||||||||| ||| |||||||||||||||| |||| |||||||    
T  16409889 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16409938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 16860971 - 16861020
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||||||||||||||| ||| |||||||||||||||| |||| |||||||    
T  16860971 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16861020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 347
Target Start/End: Complemental strand, 21255520 - 21255357
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||||||||||||||||||||  | | ||||||  |||| ||||| |||||||| |||||||||  ||| | |||||||| ||| ||    
T  21255520 aatgcctt-tttaggttaaatgcgatctttgtcgttcgagttgatgtgagtttatcttagaggttaggaactaagtt-gttaccctgctgttaatgtctc 21255423  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    | |||| || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  21255422 actaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatga 21255357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 21389085 - 21389138
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||    
T  21389085 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaa 21389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 2418457 - 2418532
Alignment:
Q  28 gaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgg 103  Q
    |||| ||||||| |||| |||||||||| |||||||| ||| |||||| ||| || || ||||| |||||||||||    
T  2418457 gaactttagatggttttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacctgg 2418532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 16800024 - 16799929
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatag-tttaagaatgaatttttgg 127  Q
    |||||||||||| |||||||||| |||||||| ||| |||||| | | || || ||||||||||||| ||| | || ||||| |||| ||||||||    
T  16800024 ttagatgtttttgagtgcctgaatatgtataagaatgattaggcaggtttttagattgagattgaacatgggaaagttttaaaaatggatttttgg 16799929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 22996379 - 22996313
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| |||| |||||||||| |||||||| ||| |||||| ||| || || |||||||||||||    
T  22996379 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaac 22996313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 16411903 - 16411952
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||| ||||||||||| ||| |||||||||||| |||||||| |||||||    
T  16411903 attttgtaattttgacttttgagttgaaccttaaatgtttttgagtgcct 16411952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 19899571 - 19899510
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattatta 73  Q
    ||||||| ||| ||||||||||||||||||||| ||||||| || |||| || |||| ||||    
T  19899571 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 19899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 22365209 - 22365128
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||| |||| ||||||| |||| |||||||  | |||||||||||| |||||| ||| || || |||||| |||||||||    
T  22365209 ttaagtcgaactttagatgattttgagtgcctagatatgtataataatgattaggcaagtttttagattgagtttgaacctg 22365128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 6520404 - 6520368
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  6520404 tgcatgagtcggtctaagttgattaagatgatgatgt 6520368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 15602656 - 15602700
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  15602656 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 15602700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 15611108 - 15611152
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  15611108 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 15611152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 20532981 - 20533085
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    ||||||||| | ||||||| |||| |||| |||||  |||| |||||| |||||| ||  || || ||||||||||||| ||| | ||||||| |||| |    
T  20532981 ttaagttgagctttagatgattttgagtgtctgaatgtgtacaataatgattaggcaaatttttagattgagattgaacttgggaaagtttaaaaatgga 20533080  T
Q  121 ttttt 125  Q
    |||||    
T  20533081 ttttt 20533085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 30642934 - 30642974
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  30642934 ttttgacttttgagttgaaccttagatgtttttgagtgcct 30642974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 38855336 - 38855372
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  38855336 tgcatgagtcggtctaagttgattaagatgatgatgt 38855372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 179; Significance: 2e-96; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 39705919 - 39706284
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | ||| ||||||||||    
T  39705919 tgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacc 39706018  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgt 191  Q
    |||||||||||||||| |||||||  | ||||  ||||||||||||||| ||||||||||||  ||           || ||||| ||| ||||| ||||    
T  39706019 tggaatagtttaagaacgaattttgag-agttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgt 39706117  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||||||||||||||||||||||||| | ||||||  |||||||||||||| |||| || |||||| |||||||||||||| |||||| |||||||||     
T  39706118 ttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttggagattaggaattaagttgtttatcttgctgttgttgttttagtaagcctg 39706217  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    |||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  39706218 aattatatgatctaatgttgttgctaatgttatataattgtatatacattacatgaattatgttgat 39706284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 15099840 - 15099474
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||| ||||| || || |||||||||||||||| ||||||||||||||    
T  15099840 tgattttgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacc 15099741  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||| ||           |  ||||| ||| |||| |||||    
T  15099740 tggaatagtttaagaatgaatttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgtcttgt 15099641  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||| |||||||||||||||  | ||||||  |||||||||||||||||||||||||||||||||| |||| |||| |  || ||||||||||     
T  15099640 ttaggttaaaagcgatctttgtcgcatgagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatgttgtcattccagtaagcctg 15099541  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
     |||||||| |||||| ||| ||  |||||||||||||||||||||||||| |||||| ||| ||||    
T  15099540 gattgtatattctaatgttgatgataatgttatataattgtatatacattatatgaattatgttgat 15099474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 13 - 358
Target Start/End: Complemental strand, 15190795 - 15190441
Alignment:
Q  13 tttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttta 112  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||| |||| || ||||| |||| || || ||||||||| ||||||||||||||||    
T  15190795 tttgacctttaagtcgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctggaatagttta 15190696  T
Q  113 agaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgtttaggttaaatg 203  Q
    |||||| ||||||||  |||  | ||| ||||||||| ||||||||||||| ||           |  ||||| ||| |||||||||||||||||||| |    
T  15190695 agaatggatttttgggcgttacatctgtactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaag 15190596  T
Q  204 cgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatc 303  Q
    ||||||||||||||| | ||||||  |||||||||||| ||||||||||||||||||||| |||| |||| |  || ||||||||||  |||||||| ||    
T  15190595 cgatctttgtcgcacgagttgatgtgagttgatcttgggggttagaaactaagttatttaccttgatgttgtcattccagtaagcctggattgtatattc 15190496  T
Q  304 taatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    |||| ||| ||  |||||||||||||||||||||||||| |||||| ||| ||||    
T  15190495 taatgttgatgataatgttatataattgtatatacattatatgaattatgttgat 15190441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 43198219 - 43198381
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| || |||||||||||||     
T  43198219 tgatttcgtagttttgacccttaagttaaaccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaaca 43198318  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||||||||||||||||  |||||||| ||||  |||||||||| ||||||||||||||||||    
T  43198319 tggaatagtttaagaattgatttttgggagttacacctgaactcaccatagcgagtagaggct 43198381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 349
Target Start/End: Complemental strand, 8846864 - 8846507
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| ||||||  ||||||||||||| ||| ||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  8846864 gatttcgtaattttgacttttgagttgattcttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 8846765  T
Q  102 ggaatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    ||||   ||| ||||||||||||| || ||||| |||| |||||||||| ||||||||||||| ||           |  | ||| ||| |||| |||||    
T  8846764 ggaaagattttagaatgaattttttgtgagttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttgt 8846665  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||| ||||||||||||||||||||||| | ||||||  |||||| ||| ||| |||||||||||||| |||||||||  ||| ||||| ||||||| ||     
T  8846664 ttatgttaaatgcgatctttgtcgcacgagttgatgtgagttgaacttagagattagaaactaagttgtttatcttgtagttgttgttccagtaagactg 8846565  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |    ||| |  | || |||||   |||||||||||||||||||||||||||||||||    
T  8846564 atgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaat 8846507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 15464562 - 15464722
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||| |||||||| |||||||||   ||||||| |||| |||||||||| |||||||||||| ||||||||||||| || ||||||||||||||||    
T  15464562 atttcgtagttttgacccttaagttgatatttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctg 15464661  T
Q  103 gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
     ||||||||||||||| ||||||||  |||  |||||||||| ||||||||||||||||||    
T  15464662 aaatagtttaagaatggatttttgggtgttacacctgaactcaccatagcgagtagaggct 15464722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 12774487 - 12774194
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| ||||| |||||||| | | |||||||||||||    
T  12774487 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacct 12774388  T
Q  102 gga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgcct 188  Q
    ||| | |  ||| |||||||||||  | | | ||||||||||||||||| ||||| ||||||| ||             ||||   || ||| | |||||    
T  12774387 ggagagacgtta-gaatgaattttgtgaact-gaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacagactgcct 12774293  T
Q  189 tgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||||||||||||||||||| ||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||| |||||||    
T  12774292 tgtttaggttaaatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaag 12774194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13845029 - 13844867
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||| |||| || ||||| ||||||| || ||  ||||| ||||    
T  13845029 tgatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaagattctagatcaagatttaacc 13844930  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||||||||||||||||| |||||||| ||||  ||||| ||| ||||| |||||||||||||    
T  13844929 tggaatagtttaagaatggatttttgggagttacacctgtacttgccatggcgagtagaggct 13844867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 52242824 - 52242986
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||| ||||||||||    ||||||| |||  ||||||||||||||||||||||| || |||||||||| || | ||||||||||||    
T  52242824 tgatttcgtagttttgatctttaagttggtatttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacc 52242923  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||||||||||||||||| ||| |||| ||||  |||||||||||||||||||||||||||||    
T  52242924 tggaatagtttaagaatgcattgttgggagttacacctgaactcgccatagcgagtagaggct 52242986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 12288038 - 12288195
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||||| |||| ||  ||||||||| || ||||||  ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||     
T  12288038 ttaggtttaatgtgacttttgtcgcataagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 12288137  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  12288138 aattatatgatttaatgttgttggtaatgttatatagttgtatatacattacatgaat 12288195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 15868277 - 15868391
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    ||||| || ||||||||||||||||||| |||| |||||||||| |||||||||||| |||||||||| || || ||||||||||||||||| | |||||    
T  15868277 ttttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgggaaagttt 15868376  T
Q  112 aagaatgaatttttg 126  Q
    || |||  |||||||    
T  15868377 aaaaatagatttttg 15868391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13404 - 13516
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| ||||||||||| ||||||| |||| |||||||||||| |||||||||| |||||| ||| || || ||||||||||||||    
T  13404 tgattttgtatttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacc 13503  T
Q  101 tggaatagtttaa 113  Q
    ||| | |||||||    
T  13504 tgggaaagtttaa 13516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 3097121 - 3097017
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| |||||||||| ||| |||| |||||||||||||||  ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  3097121 gatttcataattttgacttttgagttaaaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 3097022  T
Q  102 ggaat 106  Q
    |||||    
T  3097021 ggaat 3097017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 7089355 - 7089251
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| ||||||||||||||||  | | ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  7089355 gatttcgtaattttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 7089256  T
Q  102 ggaat 106  Q
    |||||    
T  7089255 ggaat 7089251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 12903234 - 12903131
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||||||||||||| ||| | |||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  12903234 gatttcgtaattttgacttttgagttgaaccttagatgctttga-gtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 12903136  T
Q  102 ggaat 106  Q
    |||||    
T  12903135 ggaat 12903131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 12287791 - 12287890
Alignment:
Q  28 gaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||||||||||| |||||| |||||||||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| ||||||||    
T  12287791 gaaccttagatgtttctaagtgtctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 12287890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 16597128 - 16597031
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    ||||||||||  ||| | |||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||||||    
T  16597128 gtaattttgatttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 21814936 - 21815095
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||| ||||||||| |||| |||| |||||||||| ||||||| ||||||||||| | || | ||| | ||||||||    
T  21814936 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21815035  T
Q  103 gaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || ||  ||||||||||| ||||||| || || || |||||||||||| |||||||||||||    
T  21815036 gatta-attaagaatgaactttttggaagctg-acttgaactcgccatggcgagtagaggct 21815095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 21815265 - 21815424
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||| ||||||||| |||| |||| |||||||||| ||||||| ||||||||| | | || | ||| | ||||||||    
T  21815265 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctg 21815364  T
Q  103 gaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || || || ||||||||| ||||||| || ||| |||||||||||||| |||||||||||||    
T  21815365 gattaatt-aagaatgaactttttggaagctga-cctgaactcgccatggcgagtagaggct 21815424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 21818358 - 21818517
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||| ||||||||| |||| |||| |||||||||| ||||||| ||||||||||| | || | ||| | ||||||||    
T  21818358 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21818457  T
Q  103 gaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || ||  ||||||||||| ||||||| || || || |||||||||||| |||||||||||||    
T  21818458 gatta-attaagaatgaactttttggaagctg-acttgaactcgccatggcgagtagaggct 21818517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 44928555 - 44928716
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||| ||| |||||||| ||| |||||| ||||| |||||||| ||||||||||||| | ||||||| ||||||||||| |||| | |||||||||||||    
T  44928555 gattccgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacct 44928654  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||   ||| ||||||||  ||||| | |   ||| ||||||||||| ||||| |||||||    
T  44928655 ggaaagattttagaatgaaactttgggaatctgaccagaactcgccatggcgagcagaggct 44928716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 16239624 - 16239728
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaag-attgtaaattgagattgaacc 100  Q
    ||||||||||||||||| ||| |||||  ||||||||| |||| ||||||||||||||| ||||||| |||||||||| | |||| | ||||||||||||    
T  16239624 gatttcgtaattttgacttttgagttgctccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacc 16239723  T
Q  101 tggaa 105  Q
    |||||    
T  16239724 tggaa 16239728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 15552302 - 15552199
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||| ||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||| ||||    
T  15552302 gatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacct 15552203  T
Q  102 ggaa 105  Q
    ||||    
T  15552202 ggaa 15552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 24029230 - 24029127
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||||||||||||||||| ||| ||||||||||||||| ||||| | |||| |||||| ||||   |||||||||||||    
T  24029230 gatttcgtgattttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacct 24029131  T
Q  102 ggaa 105  Q
    ||||    
T  24029130 ggaa 24029127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 53081979 - 53082137
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggtta-gaaactaagttatttatcttgctgttattgtttcagtaagcct 290  Q
    |||||||||||| ||  |||||||||| | ||||||  |||||||||||| || || |||||||||||  ||||||| ||||| ||||||||||||||||    
T  53081979 ttaggttaaatgtgacatttgtcgcacgagttgatgtgagttgatcttggggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcct 53082078  T
Q  291 aaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
     |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  53082079 gaattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 53082137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 14052948 - 14053049
Alignment:
Q  5 ttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgga 104  Q
    |||||| ||||||| ||| |||||||||||||||| |||| |||||||||| |||| ||||||| ||||||||||| ||||   ||||||||||| ||||    
T  14052948 ttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacttgga 14053047  T
Q  105 at 106  Q
    ||    
T  14053048 at 14053049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 347
Target Start/End: Complemental strand, 16596946 - 16596782
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||| |||| |||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| ||||      
T  16596946 aatgcctt-tttaggttgaatgtgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttca 16596848  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    |||||| || |    |||||  |||| ||| |   |||||||||||||||||||||||||||||||    
T  16596847 agtaagactgatgcttataaattaatgttgcttataatgttatataattgtatatacattacatga 16596782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 46640285 - 46640441
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| |||||||||||||||||| |||     
T  46640285 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttatcttactgttattgtttcagtaaacctg 46640383  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||    |||| |||||| ||||||| ||||||||||||    
T  46640384 aattatatgatttgatgttgttaatgatgtgatataaatgtatatgcattacatgaat 46640441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 14039138 - 14039039
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||| ||||||| |||| | |||||||||||||    
T  14039138 gatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacct 14039039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 6190913 - 6190819
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||| ||| ||||   |||||||||||||||||    
T  6190913 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 6190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 53081748 - 53081854
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || | ||||||| ||||||||||||||| |||| | ||| || || ||||||||||||||||||| ||||||| |||| |    
T  53081748 ttaagtcgaactttagatgattctgagtgcctaaacatgtataataatgattaagcaagtttttagattgagattgaacctggaaaagtttaaaaatgga 53081847  T
Q  121 tttttgg 127  Q
    |||||||    
T  53081848 tttttgg 53081854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 32851921 - 32851816
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||| |||||  ||| || || |||||||||| |||||| |  |||||| |||| |    
T  32851921 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattggacctgggaaggtttaaaaatgga 32851822  T
Q  121 tttttg 126  Q
    ||||||    
T  32851821 tttttg 32851816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 13812441 - 13812544
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||||||||||||||||  ||| |||| |||||||||| ||||| | ||||||||| | ||||   |||||||||||||    
T  13812441 gatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacct 13812540  T
Q  102 ggaa 105  Q
    ||||    
T  13812541 ggaa 13812544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 15091386 - 15091283
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| | ||||||| |||| |||  |||||||||| ||||| | ||||||||||| |||| | |||||||||||||    
T  15091386 gatttcgtgattttgacttttgagttgatctttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacct 15091287  T
Q  102 ggaa 105  Q
    ||||    
T  15091286 ggaa 15091283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 20156922 - 20157025
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||| | |||||||||  ||| ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||    
T  20156922 gatttcgtgattttgacttttgagttaatccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 20157021  T
Q  102 ggaa 105  Q
    ||||    
T  20157022 ggaa 20157025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 22633845 - 22633948
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||||| |||||||   || ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||    
T  22633845 gatttcgtgattttgacttttgagttgaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 22633944  T
Q  102 ggaa 105  Q
    ||||    
T  22633945 ggaa 22633948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 16377154 - 16377315
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||||||| ||| |||||| ||||||||| |||| || | |||||||||| ||||||| ||||||||| | ||||   |||||||||||||    
T  16377154 gatttcatgattttgacttttgagttgatccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacct 16377253  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||||  |   |||||||| |||||| | |   ||||||||||||||  ||||| |||||||    
T  16377254 ggaatgatcgtagaatgaacttttgggaatctgacctgaactcgccacggcgagcagaggct 16377315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 44053318 - 44053218
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||||||| ||| |||||| ||||||||| |||| |||| |||||||||| ||||||| ||| ||||||| ||||   |||||||||||||    
T  44053318 gatttcatgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacct 44053219  T
Q  102 g 102  Q
    |    
T  44053218 g 44053218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 7799186 - 7799083
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| | | |||||| ||||||||| |||| ||||||||||||||  ||||||| ||||||| | | ||||   |||||||||||||    
T  7799186 gatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacct 7799087  T
Q  102 ggaa 105  Q
    ||||    
T  7799086 ggaa 7799083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 17047726 - 17047813
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| ||| ||||||||||||||||| ||| ||||||||||||||  ||||||| ||||||||| | ||||   |||||||||||    
T  17047726 ttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac 17047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 22636923 - 22636820
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| | | |||||| ||||||||| |||| |||| ||||| |||| ||||||| ||||||||||| ||||   |||||||||||||    
T  22636923 gattttgtgattttgacttctgagttgatccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22636824  T
Q  102 ggaa 105  Q
    ||||    
T  22636823 ggaa 22636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 22634033 - 22634075
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttg 224  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  22634033 aatgccttgtttaggttaaatgcgatctttgtcgcacgatttg 22634075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 46640031 - 46640137
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || | |||||||||||||||| |||||| |||||| ||| || || ||||||||| ||||| | | ||||||| |||| |    
T  46640031 ttaagtcgaactttagatgattctgagtgcctgaacatgtaaaataatgattaggcaagtttttagattgagattaaacctaggaaagtttaaaaatgga 46640130  T
Q  121 tttttgg 127  Q
    |||||||    
T  46640131 tttttgg 46640137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 349
Target Start/End: Original strand, 13695 - 13836
Alignment:
Q  208 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 307  Q
    ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||  ||||  |||| ||||||| || |  | ||| || | ||    
T  13695 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgat 13794  T
Q  308 attgttgcgaatgttatataattgtatatacattacatgaat 349  Q
     |||||   ||||| ||||||||||||||||||||| |||||    
T  13795 gttgtttataatgtgatataattgtatatacattacttgaat 13836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 44102697 - 44102597
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||| ||||| ||||||| |||| ||| || ||||   ||||||||||||||    
T  44102697 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgagcatgtttaataatgattatgaa-gaatgtaggatgagattgaacctg 44102599  T
Q  103 ga 104  Q
    ||    
T  44102598 ga 44102597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 24029042 - 24029006
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||||||||||||||    
T  24029042 aatgccttgtttaggttaaatgcgatctttgtcgcac 24029006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 3332186 - 3332151
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgca 217  Q
    ||||||||||||||||||||||||||||||||||||    
T  3332186 aatgccttgtttaggttaaatgcgatctttgtcgca 3332151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 15552106 - 15552039
Alignment:
Q  191 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagtt 258  Q
    ||||||| |||||||||||||||||  | | ||||||  |||||||||| ||||||||||||||||||    
T  15552106 tttaggtaaaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagtt 15552039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 20157112 - 20157146
Alignment:
Q  184 tgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||||||||||||    
T  20157112 tgccttgtttaggttaaatgcgatctttgtcgcac 20157146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 17333820 - 17333749
Alignment:
Q  28 gaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    |||| ||||||| |||| |||||||||| ||||| |||||| |||||| ||| || || |||||||||||||    
T  17333820 gaactttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17333749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Complemental strand, 15551981 - 15551951
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  15551981 aatgttatataattgtatatacattacatga 15551951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 32306582 - 32306648
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| |||| ||||||| ||||||||||||||| |||||| ||| || || ||||| |||||||    
T  32306582 ttagatggttttgagtgcctaaacatgtataataatgattaggcaagtttttagattgaaattgaac 32306648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 32851676 - 32851642
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgc 216  Q
    ||||||| |||||||||||||||||||||||||||    
T  32851676 aatgcctggtttaggttaaatgcgatctttgtcgc 32851642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 44676108 - 44676047
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattatta 73  Q
    ||||||| ||| ||||||||||||||||||||| ||||||| || |||| || |||| ||||    
T  44676108 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 44676047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 13569988 - 13569948
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  13569988 ttttgacttttgagttgaaccttagatgtttttgagtgcct 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 13812629 - 13812665
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  13812629 aatgctttgtttaggttaaatgtgatctttgtcgcac 13812665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 15094249 - 15094209
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  15094249 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15094209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 15121446 - 15121486
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  15121446 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15121486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 16270320 - 16270356
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  16270320 tgcatgagtcggtctaacttgatgaagatgatgatgt 16270356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 16348331 - 16348375
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  16348331 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16348375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 23843955 - 23843915
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  23843955 ttttgacttttgagttgaaccttagatgtttttgagtgcct 23843915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 26789872 - 26789792
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaa 113  Q
    ||||||| |||| |||||||||| |||||||||||  |||||| ||| || || ||||| ||||||| ||| | |||||||    
T  26789872 ttagatgattttgagtgcctgaatatgtataataacgattaggcaagtttttagattgaaattgaacatgggaaagtttaa 26789792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 39706373 - 39706409
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  39706373 tgcatgagtcggtctaagttgattaagatgatgatgt 39706409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 177; Significance: 3e-95; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 23019897 - 23019541
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||||| | ||||| ||||||||||||| || ||||||||||||||    
T  23019897 tgatttcgtagttttgacccttaagttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacc 23019798  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggc---tatct------ttgtccagtcacataatgccttgt 191  Q
    ||||||| ||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||   |  ||      ||||||| | ||| |||| ||||     
T  23019797 tggaatattttaagaatgaatttttgggagttacacctgaactcgccatggcgagtagaggcccttgcctcgcgagttgtccaattacaaaatg-cttgg 23019699  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||||||||||||||| || | ||||||  ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||     
T  23019698 ttaggttaaatgcgatctttgtcgaacgagttgatgtgagttgatcttggaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 23019599  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    || | ||||||||||| | ||||  |||||||||||||||||||||||||||||||||    
T  23019598 aactatataatctaatgtcgttgttaatgttatataattgtatatacattacatgaat 23019541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 19652684 - 19652390
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| ||||| |||||||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  19652684 gatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacct 19652585  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||    || ||||||||||||||  | ||| ||||||||||||||| ||||||||||||| ||           |  | ||| ||| ||| |||||||    
T  19652584 ggaaagactttagaatgaatttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgggctaactagttacaaaataccttgtt 19652485  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||| ||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  19652484 taggataaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttattgttccagtaag 19652390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 27332915 - 27333236
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| || ||||||||||||| || | |||| |||||||    
T  27332915 tgatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacc 27333014  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    |||||   ||| |||||||| |||||  ||||| ||||||||||||||| ||||||||||||| ||           || ||| | ||| ||||| |||     
T  27333015 tggaaagattttagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttg- 27333113  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| |||| ||||||||| | ||||||  |||||||||| ||||||||||||||| || ||||||||| ||||  |||||||||||||||     
T  27333114 ttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaaattgtttatcttgatgttgctgtttcagtaagcctg 27333213  T
Q  292 aattgtataatctaatattgttg 314  Q
    |||||||||||| ||| ||||||    
T  27333214 aattgtataatccaatgttgttg 27333236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 27393655 - 27393976
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| || ||||||||||||| || | |||| |||||||    
T  27393655 tgatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacc 27393754  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    |||||   ||| |||||||| |||||  ||||| ||||||||||||||| ||||||||||||| ||           || ||| | ||| ||||| |||     
T  27393755 tggaaagattttagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttg- 27393853  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| |||| ||||||||| | ||||||  |||||||||| ||||||||||||||| || ||||||||| ||||  |||||||||||||||     
T  27393854 ttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaaattgtttatcttgatgttgctgtttcagtaagcctg 27393953  T
Q  292 aattgtataatctaatattgttg 314  Q
    |||||||||||| ||| ||||||    
T  27393954 aattgtataatccaatgttgttg 27393976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 342
Target Start/End: Original strand, 22080369 - 22080719
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||||| ||| | |||| ||||||||||||||||||||| |||| |||||||||| ||||||| ||||| |||||||  | ||| |||||||||||    
T  22080369 gatttcgtaactttaaacttttagttgaaccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacct 22080468  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc------------tttgtccagtcacataatgcctt 189  Q
    ||||||||||||||| ||| || ||| ||||  ||||||||||||||| ||||||||||||| ||            | ||||   | ||| ||  ||||    
T  22080469 ggaatagtttaagaacgaacttatgggagttatacctgaactcgccatggcgagtagaggctctcgcctcgcgagcttgtgtc---tgacagaacacctt 22080565  T
Q  190 gtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcc 289  Q
    |||||||   ||||||||| ||||||||| | ||||||  |||||||||| ||||||||||||||||||  |||||||||| || |||||||||||||||    
T  22080566 gtttaggaataatgcgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgcttatcttgctcttgttgtttcagtaagcc 22080665  T
Q  290 taaattg-tataatctaatattgttgcgaatgttatataattgtatatacatta 342  Q
    ||||||| ||| | |||||  |||||  |||||||||||| |||||||||||||    
T  22080666 taaattgatatgacctaatgatgttgttaatgttatataaatgtatatacatta 22080719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25644812 - 25644651
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||   | ||||||||||||| || ||||||||||||||    
T  25644812 tgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacc 25644713  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggc 162  Q
    || ||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||||||||    
T  25644712 tgaaatagtttaagaatggatttttgggagttacacccgaactcgccatagcgagtagaggc 25644651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 25956252 - 25956414
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||||| |||| |  ||| | ||||||| || ||||||||| ||||    
T  25956252 tgatttcgtaattttgacttttaagttgaatcttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacc 25956351  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||||||||||||||||| |||||| | ||||  ||||| | ||||||| |||||||||||||    
T  25956352 tggaatagtttaagaatggattttttggagttacacctgtattcgccatggcgagtagaggct 25956414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 29808515 - 29808869
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| ||||| || ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||| ||||| |||| | |||||||||||||    
T  29808515 gatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacct 29808614  T
Q  102 ggaat-agtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgcct 188  Q
    ||||  | ||| ||||||||  ||||| | |   ||||||||||||||| ||||| ||||||| ||             ||||   || ||| |||||||    
T  29808615 ggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacagaatgcct 29808711  T
Q  189 tgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagc 288  Q
    |||||||||||| ||||||||||||||||| | ||||||  |||||||||| ||| |||||||||||||| |||| |||||||||| |||| |||||||     
T  29808712 tgtttaggttaa-tgcgatctttgtcgcacgagttgatgtgagttgatcttagagtttagaaactaagttgtttaccttgctgttaatgttccagtaaga 29808810  T
Q  289 ctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  29808811 ctgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatga 29808869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 1561607 - 1561437
Alignment:
Q  178 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 277  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||  |||||||| | |||||||||||||||||| ||||||||||||||| |     
T  1561607 acataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcctagaggttagaaactaagttgtttatcttgctgttaata 1561508  T
Q  278 tttcagtaagcctaaattgtat-aatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    || ||||||| || |    ||| ||| |||| ||| |   |||||||||||||||||||||||||||||||    
T  1561507 ttccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatatacattacatga 1561437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 19668664 - 19668507
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| ||     
T  19668664 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttggaggtaagaaactaagttgtttatcttgctgttgttgtttcagtaagtctg 19668565  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |  | ||| || || | ||||||  ||||||||||| |||||||||||||||||||||    
T  19668564 atgtatatgatgtagtgttgttgataatgttatatagttgtatatacattacatgaat 19668507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 28496105 - 28496458
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| ||||| || ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||| ||||| |||| | |||||||||||||    
T  28496105 gatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacct 28496204  T
Q  102 ggaatagtttaagaatgaat-ttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgcct 188  Q
    |||| ||  | ||||||||  |||||  | |   ||||||||||||||| ||||| ||||||| ||             ||||   || ||| |||||||    
T  28496205 ggaa-agacttagaatgaaacttttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacagaatgcct 28496300  T
Q  189 tgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagc 288  Q
    |||||||||||| ||||||||||||||||| | ||||||  |||||||||| ||| |||||||||||||| |||| |||||||||| |||| |||||||     
T  28496301 tgtttaggttaa-tgcgatctttgtcgcacgagttgatgtgagttgatcttagagtttagaaactaagttgtttaccttgctgttaatgttccagtaaga 28496399  T
Q  289 ctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    || |    ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  28496400 ctgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatga 28496458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 18457202 - 18457043
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| ||||| || ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||||||||||    
T  18457202 atttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 18457103  T
Q  103 gaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || ||  ||||||||||| ||||||| || || ||||||||| ||||| |||||||||||||    
T  18457102 gatta-attaagaatgaactttttggaagctg-acctgaactagccatggcgagtagaggct 18457043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 20637926 - 20638030
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  20637926 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 20638025  T
Q  102 ggaat 106  Q
    |||||    
T  20638026 ggaat 20638030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 1561792 - 1561689
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||  ||| | |||||||||||||    
T  1561792 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacct 1561693  T
Q  102 ggaa 105  Q
    ||||    
T  1561692 ggaa 1561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 4667855 - 4668006
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgg-aatagtt 110  Q
    ||||||| ||| || ||| ||||||||| |||| |||||||||||| || ||||||  ||||||||||| |||| | |||||||| |||||| || ||||    
T  4667855 ttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtt 4667954  T
Q  111 taagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    | ||||||||||||||  |  |||||||||||||||||| |||||||||||||    
T  4667955 t-agaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggct 4668006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 19303173 - 19303273
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  19303173 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 19303272  T
Q  102 g 102  Q
    |    
T  19303273 g 19303273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 20360603 - 20360707
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||  ||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  20360603 gatttcgtgtttttgacttttcagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 20360702  T
Q  102 ggaat 106  Q
    |||||    
T  20360703 ggaat 20360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 18409459 - 18409562
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||||||| |||||| ||||||||| |||| ||||||| ||||||| || |||| ||||||||||| |||| | |||||||||||||    
T  18409459 gatttcgtgattttgacctttgagttgatccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacct 18409558  T
Q  102 ggaa 105  Q
    ||||    
T  18409559 ggaa 18409562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 18821463 - 18821566
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||| ||| ||||   ||||||||||||||    
T  18821463 atttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 18821562  T
Q  103 gaat 106  Q
    ||||    
T  18821563 gaat 18821566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 22779859 - 22779962
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  22779859 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22779958  T
Q  102 ggaa 105  Q
    ||||    
T  22779959 ggaa 22779962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 4185465 - 4185616
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgg-aatagtt 110  Q
    ||||||| ||| || ||| ||||||||| |||| ||||| |||||| || ||||||  |||| |||||| |||| | ||||||||||||||| || ||||    
T  4185465 ttttgacttttgagatgacccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagtt 4185564  T
Q  111 taagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    | ||||||||||||||  |  |||||||||||||||||| |||||||||||||    
T  4185565 t-agaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggct 4185616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20109705 - 20109579
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||| | ||||||||||| ||||||| || | ||||||||||||||||||||||| |||||| ||| || || ||||||||||||||    
T  20109705 tgattttgtagttttgatccttaagttgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacc 20109606  T
Q  101 tggaatagtttaagaatgaatttttgg 127  Q
    | | | ||||||| |||| ||| ||||    
T  20109605 taggaaagtttaaaaatggattattgg 20109579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 4674702 - 4674853
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgg-aatagtt 110  Q
    ||||||| ||| || ||| ||||||||| |||| |||||||||||| || ||||||  ||||||||||| |||| | |||||||| |||||| || ||||    
T  4674702 ttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtt 4674801  T
Q  111 taagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    | ||||||||||||||  |  ||||||| |||||| ||| |||||||||||||    
T  4674802 t-agaatgaatttttgtgaactgaaccttaactcgtcatggcgagtagaggct 4674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 9098370 - 9098457
Alignment:
Q  208 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt 295  Q
    ||||||||||| | ||||||  |||||||||| ||||| ||||||||| || |||||||||| |||||||||||||||||||| ||||    
T  9098370 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaatttgtttatcttgcagttattgtttcagtaagcctgaatt 9098457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 17287428 - 17287511
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgta 85  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  17287428 gatttcgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgta 17287511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 25628987 - 25629090
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||||||| ||| |||||||||||||||||| ||||| |||| ||||| | || |||| ||||||||| |||||| | |||||||||||||    
T  25628987 gatttcatgattttgactttttagttgaaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacct 25629086  T
Q  102 ggaa 105  Q
    ||||    
T  25629087 ggaa 25629090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 19668918 - 19668812
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| ||||||||||||||| | |||| |||||||||||| ||||| |||||  ||| || || |||||||||||||||||   ||||||| ||||||    
T  19668918 ttaagtcgaaccttagatgtttctgagtgtctgaacatgtatcataatgattagacaagtttttatattgagattgaacctggggaagtttaaaaatgaa 19668819  T
Q  121 tttttgg 127  Q
    |||||||    
T  19668818 tttttgg 19668812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 4189416 - 4189284
Alignment:
Q  31 ccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgg-aatagtttaagaatgaatttttggta 129  Q
    ||||||||| |||| |||||||||||| || ||||||  ||||||||||| |||| | |||||||| |||||| || ||||| ||||||||||||||  |    
T  4189416 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagttt-agaatgaatttttgtga 4189318  T
Q  130 gttgaacctgaactcgccatagcgagtagaggct 163  Q
      ||||||| |||||| ||| |||||||||||||    
T  4189317 actgaacctaaactcgtcatggcgagtagaggct 4189284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 16920276 - 16920380
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| |||||||||| |||| ||||||| ||||| ||||| ||||   | |||||| ||||    
T  16920276 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacct 16920375  T
Q  102 ggaat 106  Q
    |||||    
T  16920376 ggaat 16920380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 15894062 - 15894165
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | |||||||  || |||||  |||||||| ||||    
T  15894062 gatttcgtacttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacct 15894161  T
Q  102 ggaa 105  Q
    ||||    
T  15894162 ggaa 15894165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 21939872 - 21939769
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||||||||||||||||   || ||||||||||||||| ||||| | ||||||||||| ||||   ||||||||| |||    
T  21939872 gatttcgtgattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcct 21939773  T
Q  102 ggaa 105  Q
    ||||    
T  21939772 ggaa 21939769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 22334514 - 22334617
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||||| |||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | |||||||  || |||||  |||||||| ||||    
T  22334514 gatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacct 22334613  T
Q  102 ggaa 105  Q
    ||||    
T  22334614 ggaa 22334617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 9098080 - 9098206
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| |||||| |||| ||||||| || | ||||||||||||  ||||||||| |||||  ||| || || ||||| ||||||||    
T  9098080 tgattttgtagttttgacccttaagtcgaactttagatgattctgagtgcctgaacagatataataatgattagacaagtttctagattgatattgaacc 9098179  T
Q  101 tggaatagtttaagaatgaatttttgg 127  Q
    ||| | ||||||| |||| ||||||||    
T  9098180 tgggaaagtttaaaaatggatttttgg 9098206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 25611355 - 25611429
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattagga 76  Q
    |||||||| |||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||||| |||||||    
T  25611355 gatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattagga 25611429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 290
Target Start/End: Complemental strand, 35008442 - 35008344
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 290  Q
    ||||| |||||| || |||||| |||| | ||||||  |||||||| ||| ||| ||||||||||||  ||||||| ||||||||||||||||||||||    
T  35008442 ttaggataaatgtgacctttgttgcacgagttgatgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttattgtttcagtaagcct 35008344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 22439288 - 22439227
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtata 63  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||| |||||||||| |||||||    
T  22439288 gattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtata 22439227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 29061025 - 29060868
Alignment:
Q  6 tcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||| |||| ||| ||| |||||| ||||||||| |||| |||||||||||||||  |||||| |||||||| || ||||   |||||||||||||||||    
T  29061025 tcgtgatttcgacttttgagttgatccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaa 29060926  T
Q  106 tagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
       ||  |||||||| |||||| | |   ||||||||||||||   ||||||||||||    
T  29060925 agattgtagaatgaacttttggaaatctgacctgaactcgccacgacgagtagaggct 29060868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 20594262 - 20594159
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| ||||| || ||| |||||| |||||||||||||| ||||||| ||||||| |||  || |||||| |||| ||||   |||||||||||||    
T  20594262 gatttcgtgatttttacttttgagttgatccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacct 20594163  T
Q  102 ggaa 105  Q
    ||||    
T  20594162 ggaa 20594159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 19023928 - 19023814
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    |||||| | ||||||||||  ||||||| |||   ||||||||| |||||||||||| |||||| ||| || || ||||||||||||||||  | |||||    
T  19023928 ttttgaaccttaagttgaattttagatgatttcgggtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagttt 19023829  T
Q  112 aagaatgaatttttg 126  Q
    || |||| |||||||    
T  19023828 aaaaatggatttttg 19023814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 35008684 - 35008618
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    |||||||||||||||||||||||||||||||| ||| |||||| ||| || || | |||||||||||    
T  35008684 ttagatgtttttaagtgcctgaacatgtataagaatgattaggcaagtttttagactgagattgaac 35008618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 19863466 - 19863413
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  19863466 gatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 19863413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 18697034 - 18696955
Alignment:
Q  21 ttaagttgaaccttagatg-tttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||||||| ||||||| ||||| |||||||||| |||||||||||| |||||| ||| || || |||||||| ||||    
T  18697034 ttaagttgaactttagatgatttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagatggaac 18696955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 20109417 - 20109354
Alignment:
Q  208 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 271  Q
    ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||||||    
T  20109417 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctg 20109354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 18180974 - 18180925
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| |||||||| ||| ||||||||||||||||||||| |||||||    
T  18180974 atttcgtgattttgacttttgagttgaaccttagatgtttttgagtgcct 18180925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 22432738 - 22432677
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtata 63  Q
    ||||| ||| ||||||| ||| ||||||||||||||||||||| ||||| |||| |||||||    
T  22432738 gattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcatgaagatgtata 22432677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 25641816 - 25641877
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtata 63  Q
    ||||| ||| ||| ||| ||| ||||||||||||||||||||| |||||||||| |||||||    
T  25641816 gattttgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgtata 25641877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 31155040 - 31155133
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    ||||||| ||| || ||| ||||||||| |||| |||||||||| | || ||||||  ||| ||||||| |||| | |||||||||||||||||    
T  31155040 ttttgacttttgagatgacccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaa 31155133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 15041184 - 15041248
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataa 67  Q
    |||| ||||||||||| ||| ||||  ||||||||||||||| |||||||||| |||| ||||||    
T  15041184 attttgtaattttgacttttgagttataccttagatgtttttgagtgcctgaagatgtttaataa 15041248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 22831980 - 22831916
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataata 66  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||  ||||||||| |||||    
T  22831980 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtttgaacatgtctaata 22831916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 18706785 - 18706706
Alignment:
Q  21 ttaagttgaaccttagatg-tttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||||||| ||||||| ||||| |||| ||||| |||||||||||| |||||| ||| || || |||||||| ||||    
T  18706785 ttaagttgaactttagatgatttttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagatggaac 18706706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 20224478 - 20224412
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| |||| |||||||||||||| |||| ||| |||||| ||| || || |||||||||||||    
T  20224478 ttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 20224412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 22118462 - 22118396
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| |||| |||||||||||||| |||| ||| |||||| ||| || || |||||||||||||    
T  22118462 ttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 22118396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 290
Target Start/End: Complemental strand, 23077024 - 23076926
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 290  Q
    ||||| |||||| || |||||| |||  | ||||||  |||||||| ||| ||| ||||||||| ||  ||||||| ||||| ||||||||||||||||    
T  23077024 ttaggataaatgtgacctttgttgcatgagttgatgtgagttgatcatgggggtaagaaactaatttgcttatcttactgttgttgtttcagtaagcct 23076926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 22059376 - 22059429
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||| ||||| | || | ||||||||||||||||||||| ||||||||||    
T  22059376 gatttcgtgattttaagctgtgagttgaaccttagatgtttttgagtgcctgaa 22059429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 349
Target Start/End: Original strand, 9098467 - 9098499
Alignment:
Q  317 aatgttatataattgtatatacattacatgaat 349  Q
    |||||||||||||| ||||||||||||||||||    
T  9098467 aatgttatataattatatatacattacatgaat 9098499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 11185980 - 11185876
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||||  |||||  ||| ||||||||||||||||  ||| |||||||||||||||  |||| | |||||  |||| ||||    ||||||||||||    
T  11185980 gatttcgtatatttgatttttgagttgaaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacct 11185881  T
Q  102 ggaat 106  Q
    |||||    
T  11185880 ggaat 11185876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 17287881 - 17287917
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  17287881 tgcatgagtcggtctaagttgattaagatgatgatgt 17287917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 21739665 - 21739705
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  21739665 ttttgacttttgagttgaaccttagatgtttttgagtgcct 21739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 25714453 - 25714417
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  25714453 tgcatgagtcggtctaagttgattaagatgatgatgt 25714417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 27333303 - 27333339
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  27333303 tgcatgagtcggtctaagttgattaagatgatgatgt 27333339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 27394043 - 27394079
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  27394043 tgcatgagtcggtctaagttgattaagatgatgatgt 27394079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 4e-94; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 22921498 - 22921856
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||    
T  22921498 tgatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacc 22921597  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
     ||||||||||||||| |||||||||  ||||  || |||||||||||| ||||||||||||| ||           || | ||| ||| ||||||||||    
T  22921598 aggaatagtttaagaacgaatttttgagagttagacttgaactcgccatggcgagtagaggctctcgcctcgcgaactgcctagttacagaatgccttgt 22921697  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    || |||||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||     
T  22921698 ttgggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 22921797  T
Q  292 aatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||  ||| ||||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  22921798 aattaatatgatctaatgttgttgttaatgttatataattgtatatacattatatgaat 22921856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 35981318 - 35981683
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||| ||||||||||| ||||| || || |||||||||||||||| ||||||||||||||    
T  35981318 tgattttgtagttttgacctttaagtcgaacctt-gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacc 35981416  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgt 191  Q
    ||| |||||||||||| |||||| ||  ||||| ||||||||||||||| | ||||||||||| ||           |  | ||| ||| ||||||||||    
T  35981417 tgggatagtttaagaacgaatttatgtgagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgt 35981516  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||| |||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||| |||| |  || ||||||||||     
T  35981517 ttaggttaaaagcgatctttgtcgcacgaattgatgtgagttgatcttggaggttagaaactaagttatttatcttgatgttgtcattccagtaagcctg 35981616  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
     |||||||| |||||| ||| ||  ||||||||||||||| |||||||||| |||||| ||| ||||    
T  35981617 gattgtatattctaatgttgatgataatgttatataattgcatatacattatatgaattatgttgat 35981683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 3 - 349
Target Start/End: Complemental strand, 20637339 - 20636983
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgttttta-agtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||||||  || |||||||| || |||||||||||||| | ||| |||||||||||    
T  20637339 atttcgtaattttgacctttaagttgaaccttggatgttttttgagtgcctagacttgtataatgatgattaggaaagattggagattaagattgaacct 20637240  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||||||||||||| |||||||||  ||||| ||||||||||||||| ||||||||||||| ||           |   |||| ||| |||| ||||||    
T  20637239 ggaatagtttaagaacgaatttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaatcagttacagaatgtcttgtt 20637140  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    ||||||||| |||||||||||||||  | ||||||  |||||||||||||||||||||||||||||||||| |||| |||| |  || |||||||||| |    
T  20637139 taggttaaaagcgatctttgtcgcatgagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatgttgtcattccagtaagcctga 20637040  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||||||  | |||| ||| ||  |||||||||||||||||||||||||| ||||||    
T  20637039 attgtattttttaatgttgatgataatgttatataattgtatatacattatatgaat 20636983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 349
Target Start/End: Original strand, 52927613 - 52927968
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||| ||||||||| | | |||||||||||||    
T  52927613 gatttcgtaattttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacct 52927712  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||   |||  ||||||||||||   ||||  ||||||||||||||| ||||||||||||  ||          ||| ||||| ||| ||||||||| |    
T  52927713 ggaaagattttggaatgaattttttaaagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttg-t 52927811  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    |||||||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||| || ||||| ||||||| || |    
T  52927812 taggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctattgttgttccagtaagactga 52927911  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
        ||| |  | || |||||   |||||||||||||||||||||||||||||||||    
T  52927912 tgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaat 52927968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 349
Target Start/End: Complemental strand, 33681498 - 33681142
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||| |||||| |||| ||||||| |||||||||||||| | | |||||||||||||    
T  33681498 gatttcgtaattttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacct 33681399  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||   ||| ||||||||||||||  ||||| ||||||||||||||| ||||| ||||||| ||          ||  ||||| ||| | ||||||| |    
T  33681398 ggaaagattttagaatgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttgct 33681299  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    || ||||||||||||||||||| ||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| |||||  |||||| || |    
T  33681298 tatgttaaatgcgatctttgtcacacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttctagtaagactga 33681199  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
        ||| |  | || |||||   |||||||||||||||||||||||||||||||||    
T  33681198 tgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaat 33681142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 28194079 - 28194241
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| ||||||||||||||| ||||||| ||||||||| ||||||||||| ||||| || || |||||||||||||||| ||||||||||||||    
T  28194079 tgattttgtagttttgacctttaagtcgaaccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacc 28194178  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || |||||||||||||||||| ||||  ||||| ||||||||||||||| || ||||||||||    
T  28194179 tgaaatagtttaagaatgaatctttgtgagttgcacctgaactcgccatggcaagtagaggct 28194241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 3 - 278
Target Start/End: Complemental strand, 20248765 - 20248481
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||| ||||||||| ||| |||||| || ||||||||||| ||||||||||||||| ||||||| |||||||||||| | | | ||||||||||||||    
T  20248765 atttcgaaattttgacttttgagttgatccatagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctg 20248666  T
Q  103 ga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    || | | ||| ||||||||||||||  |  |||||||||||||||||| ||||||||||||||||           |  | ||| ||| |||||||| ||    
T  20248665 gagagacttt-agaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctatcgcctcgcgagctaactagttacagaatgccttatt 20248567  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgt 278  Q
    |||||||||||||||  ||||||||||| ||||||  | |||||||| |||||||||||||||||||||||||||| |||| ||||    
T  20248566 taggttaaatgcgattcttgtcgcacaagttgatgtaaattgatcttagaggttagaaactaagttatttatcttgatgttgttgt 20248481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 3 - 271
Target Start/End: Complemental strand, 22238117 - 22237841
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| ||| |||||| |||||||| ||||| ||||||||||||||| |||||||  ||||||||||||| | | ||||||| ||||||    
T  22238117 atttcgtaattttgacttttgagttgatccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctg 22238018  T
Q  103 gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgttt 193  Q
    |||   |||  ||||||| |||||  ||||| || |||||||||||| ||||||||||||  ||          ||| | ||| ||| ||||||||||||    
T  22238017 gaaagattttggaatgaa-ttttgtgagttgcacttgaactcgccatggcgagtagaggccctcgcctcgcgaattgactagttacagaatgccttgttt 22237919  T
Q  194 aggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 271  Q
    |||||||||||||||||| |||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||    
T  22237918 aggttaaatgcgatctttttcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctg 22237841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 172 - 342
Target Start/End: Complemental strand, 49261651 - 49261481
Alignment:
Q  172 ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 271  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||| |||| ||    
T  49261651 ccagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgagttgatgtgagttgatcttggaggttagaaactaagttatttaccttgatg 49261552  T
Q  272 ttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacatta 342  Q
    || |  || |||||||||  ||||||||| |||||| ||| ||  ||||||||||||||||||||||||||    
T  49261551 ttgtccttccagtaagccggaattgtatattctaatgttgatgataatgttatataattgtatatacatta 49261481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 43697850 - 43697727
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || | || ||||| ||||||| || ||||||||| ||||    
T  43697850 tgatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacc 43697751  T
Q  101 tggaatagtttaagaatgaatttt 124  Q
    |||||||||||||||||| |||||    
T  43697750 tggaatagtttaagaatggatttt 43697727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 21754524 - 21754232
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | |  ||||||||||||    
T  21754524 gatttcgtatttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacct 21754425  T
Q  102 -ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc-tttgtccag--------tcacataatgccttgt 191  Q
     |||| | ||| |||||||| |||||  |  |||||||||||||||||| ||||| ||||||| ||   |  | ||        | ||| | |||||||     
T  21754424 gggaagacttt-agaatgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgttttacagactgccttg- 21754328  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||||||||||| |||| ||||||||| | ||||||  |||||||||  |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  21754327 ttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatctcagaggttagaaactaagttgtttatcttgctgtcattgttccagtaag 21754232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 21861389 - 21861555
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||| |||||||||| ||  |||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||||| || |||||||    
T  21861389 aatgccttgtt-aggttaaatgtgacatttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctattgttgtttc 21861487  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||||||| |||  ||| || | || |||||   ||||| ||||||||||||||||||||| |||||    
T  21861488 agtaagcctgaatattatgatatgatgttgtttataatgtgatataattgtatatacattacttgaat 21861555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 22355817 - 22355921
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| |||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  22355817 gatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22355916  T
Q  102 ggaat 106  Q
    |||||    
T  22355917 ggaat 22355921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 22357503 - 22357607
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| |||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  22357503 gatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22357602  T
Q  102 ggaat 106  Q
    |||||    
T  22357603 ggaat 22357607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 12271848 - 12271744
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||| |||||||||||||||    
T  12271848 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcctgctgttattgtttc 12271750  T
Q  282 agtaag 287  Q
    ||||||    
T  12271749 agtaag 12271744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 21896078 - 21896241
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  |||||||||| || || |||||||||||| |||||||   |||| |||||||    
T  21896078 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttagatgtaagaaactaagttgtttatct---tgttgttgtttc 21896173  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||||||| |||  ||| || | || |||||   ||||| |||||||||||||||||||||||||||    
T  21896174 agtaagcctgaatattatgatttgatgttgtttataatgtgatataattgtatatacattacatgaat 21896241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 20846862 - 20846966
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||||||| |||||| ||||||||| |||| ||||||||||||||| ||||||| |||||| |||| ||||   |||||||||||||    
T  20846862 gattttgtaattttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacct 20846961  T
Q  102 ggaat 106  Q
    |||||    
T  20846962 ggaat 20846966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 27250372 - 27250476
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||| ||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   || ||||||||||    
T  27250372 gatttcgtaatattgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacct 27250471  T
Q  102 ggaat 106  Q
    |||||    
T  27250472 ggaat 27250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 41049619 - 41049725
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| ||||||||||||||| | |||||||||||||||||||||||  ||||| ||| || || ||||||||||||||||| | ||||| | ||||||    
T  41049619 ttaagtcgaaccttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctgggaaagtttgaaaatgaa 41049718  T
Q  121 tttttgg 127  Q
    |||||||    
T  41049719 tttttgg 41049725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 433496 - 433335
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||| ||| |||||||| ||| |||||| ||||||||| |||| |||| |||||||||| || |||| ||||||||||| |||| | |||||||||||||    
T  433496 gattccgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacct 433397  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||   ||| ||||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  433396 ggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 433335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 16368115 - 16368272
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| | | ||| ||||| |||||| |||||||| ||||| ||||||||||||||||     
T  16368115 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcataggggtaagaaattaagttgtttatcttactgttgttgtttcagtaagcctg 16368214  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  16368215 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 16368272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16759216 - 16759115
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| |||||| ||||||||||||||||| ||||||| |||| |||||||||| |||||| ||| || || ||||||||||||||    
T  16759216 tgattttgtagttttgacccttaagtcgaaccttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacc 16759117  T
Q  101 tg 102  Q
    ||    
T  16759116 tg 16759115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 20919083 - 20918990
Alignment:
Q  9 taattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||| |||||| ||||| ||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||||||||||    
T  20919083 taattttgacctttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 20918990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21861125 - 21861250
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| ||||||||| | ||||||| || | |||||||||||| |||||||||| |||||| ||| || || ||||||||||||||    
T  21861125 tgattttgtagttttgacccttaagttgatctttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacc 21861224  T
Q  101 tggaatagtttaagaatgaatttttg 126  Q
    ||| | ||||||| |||| |||||||    
T  21861225 tgggaaagtttaaaaatggatttttg 21861250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 34510269 - 34510108
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||||||  |||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  34510269 gatttcgtgattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 34510170  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||||   ||  |||||||| |||||| | |   ||||||||||||||  ||||| |||||||    
T  34510169 ggaaagattgtagaatgaacttttggaaatctgacctgaactcgccacggcgagcagaggct 34510108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21895863 - 21895975
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| ||||||||| | ||||||| || | |||||||||||| |||||||||| |||||||||| || || ||||||||||||||    
T  21895863 tgattttgtagttttgacccttaagttgatctttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacc 21895962  T
Q  101 tggaatagtttaa 113  Q
    ||| | |||||||    
T  21895963 tgggaaagtttaa 21895975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 22532758 - 22532655
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| | |||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  22532758 gatttcgtgattttgacttttgatttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22532659  T
Q  102 ggaa 105  Q
    ||||    
T  22532658 ggaa 22532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 21027152 - 21027054
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaat 106  Q
    ||||||||||||||| |||||| ||||||||| |||| ||||| ||||||||| ||||||| |||||| |||| ||||   ||||||||||||||||||    
T  21027152 gtaattttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaat 21027054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21342638 - 21342536
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| ||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||| ||| || || ||||||| ||||||    
T  21342638 tgattttgtagttttgacccttaagttgaaccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacc 21342539  T
Q  101 tgg 103  Q
    |||    
T  21342538 tgg 21342536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21347503 - 21347401
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| ||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||| ||| || || ||||||| ||||||    
T  21347503 tgattttgtagttttgacccttaagttgaaccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacc 21347404  T
Q  101 tgg 103  Q
    |||    
T  21347403 tgg 21347401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 26065464 - 26065358
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    ||||||||||| ||||||| |  | ||||||||||||||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| |    
T  26065464 ttaagttgaactttagatgatcctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgga 26065365  T
Q  121 tttttgg 127  Q
    |||||||    
T  26065364 tttttgg 26065358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 50686905 - 50686748
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||| |||||| || ||||||||||| | |||| |  |||||||| ||| ||| ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  50686905 ttaggataaatgtgacctttgtcgcacgagttgacgtgagttgatcatgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 50686806  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| |||  || |||||   ||||| |||||| ||||||| ||||||||||||    
T  50686805 aattatatgatccgatgttgttaataatgtgatataaatgtatatgcattacatgaat 50686748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 38801034 - 38801138
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| || ||||||| ||| |||||||| |||||||| ||| ||||||||||||||| ||||||| ||||||||||| ||||   || ||||||||||    
T  38801034 gatttcatatttttgacttttgagttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacct 38801133  T
Q  102 ggaat 106  Q
    |||||    
T  38801134 ggaat 38801138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 35260706 - 35260812
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || | ||||||||||||||||||||||| |||||| ||| || || ||||||||||||||||  | ||||||| |||| |    
T  35260706 ttaagtcgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatgga 35260805  T
Q  121 tttttgg 127  Q
    |||||||    
T  35260806 tttttgg 35260812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 21301170 - 21301245
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaa 77  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||    
T  21301170 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 16367873 - 16367967
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||| |||| |||||||||| |||||||||||| |||||| ||| || || ||||||| ||||||||||| |||||||  ||| ||||||||    
T  16367873 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctggaaaagtttaaagatggatttttgg 16367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 20135675 - 20135573
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||| ||||||||||| ||| |||| | ||||||||| |||| ||||| ||||||||| ||||||| ||||||||||| ||||   |||||||| |||||    
T  20135675 attttgtaattttgacttttgagtttatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctg 20135576  T
Q  103 gaa 105  Q
    |||    
T  20135575 gaa 20135573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21715037 - 21714983
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  21715037 tgatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 21714983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 20918902 - 20918798
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||  |||| |||| ||||| |||| |    
T  20918902 aatgcctt-tttaggttgaatgcgatctttgtcgttcgacttgatgtgagttgatcttagaggttagaaactaagtcgtttaccttgttgttaatgttcc 20918804  T
Q  282 agtaag 287  Q
    ||||||    
T  20918803 agtaag 20918798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 50209889 - 50209948
Alignment:
Q  46 agtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||||||    
T  50209889 agtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 50209948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 50613699 - 50613794
Alignment:
Q  29 aaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttt 124  Q
    |||||| |||| |||| ||||| |||| |||||||||||| |||||| ||| || || ||||||||||||| ||| | ||||||| ||||||||||    
T  50613699 aaccttcgatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaatttt 50613794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 50621527 - 50621622
Alignment:
Q  29 aaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttt 124  Q
    |||||| |||| |||| ||||| |||| |||||||||||| |||||| ||| || || ||||||||||||| ||| | ||||||| ||||||||||    
T  50621527 aaccttcgatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaatttt 50621622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 50687118 - 50687032
Alignment:
Q  41 ttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    |||| |||||||| | |||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| ||||||||    
T  50687118 ttttgagtgcctgtatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 50687032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 16093479 - 16093572
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttg 126  Q
    ||||||| |||| |||||||| | |||||||||||| ||| || ||| || || ||||||||||||||||||| |||| || |||| |||||||    
T  16093479 ttagatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctggaaaagttaaaaaatggatttttg 16093572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 22468329 - 22468382
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||||| ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  22468329 gatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 22468382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 22354204 - 22354306
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||| |||||||||||| ||| |||| ||||| ||||||||| | ||||| ||||||||| |  |||   |||||||||||||    
T  22354204 gattttgtgattttgacttttgagttgaaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacct 22354303  T
Q  102 gga 104  Q
    |||    
T  22354304 gga 22354306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 27652808 - 27652874
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    |||||||||||| |||||||||| ||| |||||||| |||||| ||| || || |||||||||||||    
T  27652808 ttagatgtttttgagtgcctgaatatgcataataatgattaggcaagtttttagattgagattgaac 27652874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 48521102 - 48521036
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    |||||||||||| ||| |||||| |||||||||||| |||||| ||| || || |||||||||||||    
T  48521102 ttagatgtttttgagtacctgaatatgtataataatgattaggcaagtttttagattgagattgaac 48521036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 3472560 - 3472607
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgc 50  Q
    |||||||||||||||| ||| |||||||||||||||| |||| |||||    
T  3472560 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgc 3472607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 8761266 - 8761316
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||||| ||| ||| |||||||||||||||| |||| |||||||    
T  8761266 gatttcgtaatttggacttttgagttgaaccttagatgcttttgagtgcct 8761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Original strand, 14295508 - 14295538
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  14295508 aatgttatataattgtatatacattacatga 14295538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Complemental strand, 20918768 - 20918738
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  20918768 aatgttatataattgtatatacattacatga 20918738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Complemental strand, 51130728 - 51130698
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  51130728 aatgttatataattgtatatacattacatga 51130698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 52940464 - 52940506
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattagg 75  Q
    ||||||| |||| ||||||||||||||||||||||| ||||||    
T  52940464 ttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 349
Target Start/End: Complemental strand, 22237791 - 22237762
Alignment:
Q  320 gttatataattgtatatacattacatgaat 349  Q
    ||||||||||||||||||||||||||||||    
T  22237791 gttatataattgtatatacattacatgaat 22237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 41049864 - 41050021
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||| ||| || ||||||||||  | ||||||  |||||||| | | ||| || ||||| |||  ||||||| ||||| ||||||||||||||||     
T  41049864 ttaggttatatgtgacctttgtcgcatgagttgatgtgagttgatcataggggtaaggaactaggtttcttatcttactgttgttgtttcagtaagcctg 41049963  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | |  |||||   ||||| ||||| |||||||| |||||| |||||    
T  41049964 aattatatgatttgacgttgttaataatgtgatatatttgtatatgcattacttgaat 41050021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 50613945 - 50614101
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  | ||||||  || ||| |||||||||||| ||| |||| | ||| ||  ||||||||||||     
T  50613945 ttaggttaaatgtgacctttgtcgcacgagttgatgtgaattgatcaggg-ggtaagaaactaagttgtttgtcttaccgttgttacttcagtaagcctg 50614043  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || ||| |   ||||| |||||| ||||||| ||||||||||||    
T  50614044 aattatatgatttgatgttgatattaatgtgatataaatgtatatgcattacatgaat 50614101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 50621773 - 50621929
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  | ||||||  || ||| |||||||||||| ||| |||| | ||| ||  ||||||||||||     
T  50621773 ttaggttaaatgtgacctttgtcgcacgagttgatgtgaattgatcaggg-ggtaagaaactaagttgtttgtcttaccgttgttacttcagtaagcctg 50621871  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || ||| |   ||||| |||||| ||||||| ||||||||||||    
T  50621872 aattatatgatttgatgttgatattaatgtgatataaatgtatatgcattacatgaat 50621929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 13212991 - 13213027
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  13212991 tgcatgagtcggtctaagttgattaagatgatgatgt 13213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 20091106 - 20091206
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| || ||||||| ||| |||| |||||||||||  ||| | ||||||||||||| ||||| | |||||||  || |||||  |||||||| ||||    
T  20091106 gatttcttatttttgacttttgagttaaaccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacct 20091205  T
Q  102 g 102  Q
    |    
T  20091206 g 20091206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 22432422 - 22432466
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  22432422 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 22432466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 22831021 - 22831061
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  22831021 ttttgacttttgagttgaaccttagatgtttttgagtgcct 22831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 28194265 - 28194305
Alignment:
Q  178 acataatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    ||| |||| ||||||||||||| ||||||||||||||||||    
T  28194265 acaaaatgtcttgtttaggttacatgcgatctttgtcgcac 28194305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 42864854 - 42864894
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  42864854 ttttgacttttgagttgaaccttagatgtttttgagtgcct 42864894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 166; Significance: 1e-88; HSPs: 4)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 7103 - 6746
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| || ||||||||||||| || ||| ||||||||||    
T  7103 tgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacc 7004  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    |||||||||||||||||| |||||||| | ||  ||||||||||||||| ||||||||||||  ||           |  ||||| | | ||||| ||||    
T  7003 tggaatagtttaagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgt 6904  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||||||||||||||||||||||||| | ||||||  |||||| ||||||| |||||| ||||||| |||||||||||||| |||||| ||||||| |     
T  6903 ttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgaacttggagattagaatctaagttgtttatcttgctgttgttgttttagtaagcttg 6804  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| ||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  6803 aattatatgatctaatgttgttgttaatgttatataattgtatatacattacatgaat 6746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 14483 - 14126
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| || ||||||||||||| || ||| ||||||||||    
T  14483 tgatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacc 14384  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    |||||||||||||||||| |||||||| | ||  ||||||||||||||| ||||||||||||  ||           |  ||||| | | ||||| ||||    
T  14383 tggaatagtttaagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgt 14284  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||||||||||||||||||||||||| | ||||||  |||||| ||||||| |||||| ||||||| |||||||||||||| |||||| ||||||| |     
T  14283 ttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgaacttggagattagaatctaagttgtttatcttgctgttgttgttttagtaagcttg 14184  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| ||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  14183 aattatatgatctaatgttgttgttaatgttatataattgtatatacattacatgaat 14126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 6647 - 6611
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  6647 tgcatgagtcggtctaagttgattaagatgatgatgt 6611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 14027 - 13991
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  14027 tgcatgagtcggtctaagttgattaagatgatgatgt 13991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 166; Significance: 1e-88; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 11018 - 10662
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||| | |||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||||||  || | ||||||||||||    
T  11018 tgatttcgtagttttgatccttaagttgaatcttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacc 10919  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    ||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||||| ||          ||  | |||  || |||||||||     
T  10918 tggaatagtttaagaatgaatttttgtgagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacctagttccaaaatgccttg- 10820  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||||||||| |||||||| | ||||||  |||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||||||||     
T  10819 ttaggttaaatgcgatctctgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 10720  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||||||||||| ||||||  ||||| |||||||||||||||||||||||||||    
T  10719 aattatataatctaatgttgttgttaatgtcatataattgtatatacattacatgaat 10662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 8506 - 8150
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||  ||| ||||| |||| ||||||| ||||| ||||||| || ||||||||||||||    
T  8506 tgatttcgtagttttgacccttaagttgaaccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacc 8407  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgt 191  Q
    |||||||||||||||||| |||||||| ||||  ||||||||||||||| |||||| |||||  ||          ||||||||| ||||||||| ||||    
T  8406 tggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtggaggccctcgcctcgcgagttgtccagttacataatgctttgt 8307  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    | ||||  |||| |||||||||| ||| | ||||||  |||||||||| ||||| || ||||||||| |||||| ||||||| ||||||||||||||||     
T  8306 t-aggtataatgtgatctttgtctcacgagttgatgtgagttgatcttagaggtaaggaactaagttgtttatcctgctgttgttgtttcagtaagcctg 8208  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  8207 aattatataatctaatgttgttgttaatgttatataattgtatatacattacatgaat 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 347
Target Start/End: Complemental strand, 7300 - 6946
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  7300 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 7201  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctat---ctt------tgtccagtcacataatgccttgtt 192  Q
    ||||   ||| ||||||||||||||  |  |||||||||||||||||| ||||||||||||| |   |||      |  | ||| ||| |||||||||||    
T  7200 ggaaagattttagaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgccttgcgagctaactagttacagaatgccttgtt 7101  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    |||||||||||||||  ||||||||||| ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||| || |    
T  7100 taggttaaatgcgattcttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactga 7001  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
        ||| |  |||| |||||   |||||||||||||||||||||||||||||||    
T  7000 tgcatatgaattaatgttgtttataatgttatataattgtatatacattacatga 6946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 146; Significance: 8e-77; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 33026 - 32670
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||  | ||||||||||| ||||||| || | ||||||||||||||| ||||||| ||||||||||||| || |||||||||||||     
T  33026 tgatttcgtagttttggtccttaagttgaactttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaact 32927  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatctt---------tgtccagtcacataatgccttgt 191  Q
    ||||||||| |||||||| |||||||| ||||  ||||||||||||||| ||||||||||||  ||           |  ||||| ||| ||||||||||    
T  32926 tggaatagtctaagaatggatttttgggagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgt 32827  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |  |||||||||||||||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||| |||||||||||||||||||||     
T  32826 tg-ggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgttgttattgtttcagtaagcctg 32728  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||||||||||| || |||  ||||||||||| |||||||||||||||||||||    
T  32727 aattatataatctaatgtttttgttaatgttatatagttgtatatacattacatgaat 32670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 51517 - 51619
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||| ||| ||||   ||||||||||||||    
T  51517 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 51616  T
Q  103 gaa 105  Q
    |||    
T  51617 gaa 51619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 3 - 358
Target Start/End: Original strand, 2277 - 2641
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| ||| |||||| ||||| |||||||| ||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||||    
T  2277 atttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 2376  T
Q  103 gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctat---ct------ttgtccagtcacataatgccttgttt 193  Q
    || ||||| ||||| | | || ||| ||||  ||||||||||||||| |||||||||||| ||   ||      ||| | ||| ||| ||||||||||||    
T  2377 gattagtt-aagaacgtacttgtgggagttatacctgaactcgccatggcgagtagaggccattgcctcgcgaattgactagttacagaatgccttgttt 2475  T
Q  194 aggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaa 293  Q
    ||| ||||||||||||||||||||||| ||||||  |||||||||| ||||||||||| |||||| |||||||||||| | |||||||||||||||| ||    
T  2476 aggataaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggttagaaattaagttgtttatcttgctgatgttgtttcagtaagcctgaa 2575  T
Q  294 tt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    ||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  2576 ttaatatgatctaatgttgttgttaatggtatataattgtatatacattatatgaattatgttgat 2641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 136; Significance: 8e-71; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 15461 - 15764
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    ||||||||||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||| || ||||||||||||| || ||||||||||||||    
T  15461 tgatttcgtaattttaacttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacc 15560  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    |||||||||||||||||| |||||| | | ||  || |||||||||||| ||||||||||||  ||           |  ||||| ||| ||||||||||    
T  15561 tggaatagtttaagaatggatttttcggaattacacatgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgt 15660  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||| |||||||| |||||||||||||| | ||||||  |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||     
T  15661 ttatgttaaatgtgatctttgtcgcacgagttgatgtgagttgatcttggagattagaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 15760  T
Q  292 aatt 295  Q
    ||||    
T  15761 aatt 15764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 179139 - 179085
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||| |||||||||| ||| ||||| ||||||||||||||| ||||||||||    
T  179139 tgatttcataattttgacttttgagttggaccttagatgtttttcagtgcctgaa 179085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 15862 - 15898
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  15862 tgcatgagtcggtctaagttgattaagatgatgatgt 15898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 132; Significance: 2e-68; HSPs: 3)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 358
Target Start/End: Complemental strand, 7025 - 6660
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||| |||||||| | ||||||| |||||| ||||||| |||||||||||||| | |||||||||||||||    
T  7025 gatttcgtaattttgacttttgagttgatcctttgatgttttga-gtgcctggacatgtctaataataattaggaaagattggagattgagattgaacct 6927  T
Q  102 ggaatagtttaagaatgaatttt-tggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgt 191  Q
    ||||||||||||||| |||  || ||| ||||  ||||||||||||||| |||||| |||||  ||          ||| | ||| ||| ||||||||||    
T  6926 ggaatagtttaagaacgaaacttgtgggagttatacctgaactcgccatggcgagtggaggccctcccctcgcgaattgactagttacaaaatgccttgt 6827  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    ||||| ||||||||||||||||||||||| ||||||  |||||||||| ||||||| ||||||||||  ||||||||||||| ||||||||||||||||     
T  6826 ttaggataaatgcgatctttgtcgcacaagttgatgtgagttgatcttagaggttaaaaactaagtt-gttatcttgctgttgttgtttcagtaagcctg 6728  T
Q  292 aatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    ||||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  6727 aattaatatgatctaatgttgttgttaatggtatataattgtatatacattatatgaattatgttgat 6660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 8770 - 8666
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||| |||||||||| || ||||||||||| | ||||||  | |||||||| ||||| |||||||||||| |||||||||||| | ||||| |    
T  8770 aatgccttgtt-aggttaaatgtgacctttgtcgcacgagttgatgtgaattgatcttagaggtaagaaactaagttgtttatcttgctgatgttgttcc 8672  T
Q  282 agtaag 287  Q
    ||||||    
T  8671 agtaag 8666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9035 - 8911
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| ||||||||| | ||||| | |||| ||||||||||||||||||||||| | |||| ||| || || ||||| ||| ||||    
T  9035 tgattttgtagttttgacccttaagttgatctttagaagattttgagtgcctgaacatgtataataatgactaggcaagtttttagattgacattaaacc 8936  T
Q  101 tggaatagtttaagaatgaattttt 125  Q
     || | ||||| | |||| ||||||    
T  8935 cgggaaagtttgaaaatggattttt 8911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 3e-64; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 358
Target Start/End: Complemental strand, 25176332 - 25175975
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| || |||||||||| ||| | ||||||||||||||    
T  25176332 tgatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacc 25176233  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    ||||||||||||||||   |||||||  ||||  ||||||||||||||| ||||||||||||  ||           ||  |||| ||| ||||||||||    
T  25176232 tggaatagtttaagaacagatttttgagagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcgcagttacagaatgccttgt 25176133  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||          |||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||     
T  25176132 tta----------gatctttgtcgcacgaattgatgtaagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 25176043  T
Q  292 aatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    ||||  ||| ||||||| ||||||  |||||||||||||| ||||||| ||| |||||| ||| ||||    
T  25176042 aattaatatgatctaatgttgttgttaatgttatataattatatatacgttatatgaattatgttgat 25175975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 34 - 341
Target Start/End: Complemental strand, 28406436 - 28406119
Alignment:
Q  34 tagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttggtagttg 133  Q
    |||||| |||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||| ||   ||| ||||| || |||||  |  ||    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaactg 28406337  T
Q  134 aacctgaactcgccatagcgagtagaggctatctttgtcca---------gtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttg 224  Q
    |||||||||||||||| ||||||||||||| ||      ||         || ||||||||||||||||||||||||||||||| ||||||||| | |||    
T  28406336 aacctgaactcgccatggcgagtagaggctctcgcctcgcaagtacttgtgttacataatgccttgtttaggttaaatgcgatccttgtcgcacgagttg 28406237  T
Q  225 atgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgtta 323  Q
    |||  |||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||||||||| ||  ||| ||||| | ||||||  |||| ||    
T  28406236 atgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttttagtaagcctaatttaatatgatctattgttgttgttaatggta 28406137  T
Q  324 tataattgtatatacatt 341  Q
    ||||||||||||||||||    
T  28406136 tataattgtatatacatt 28406119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 22133849 - 22134141
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  22133849 gatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 22133948  T
Q  102 -ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgcct 188  Q
     |||| | |||| |||||||||||  | | | |||| |||||||||||| ||||| ||||||| ||             ||||   || ||| | |||||    
T  22133949 aggaagacttta-gaatgaattttgtgaact-gaac-tgaactcgccatggcgagcagaggctctcgcctcgcgaatacttgt---gttacagactgcct 22134042  T
Q  189 tgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||||||||||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| ||| || |||||||    
T  22134043 tgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcatttttccagtaag 22134141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 23708252 - 23708411
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||| |||||||| || |||||| | |||||||||||| |||| |||||||| | || |||| |||||||||| | ||| |||||||||||| | |    
T  23708252 atttcgtagttttgacccttgagttgatctttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatc-g 23708350  T
Q  103 gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||    
T  23708351 gaatagtttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggct 23708411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 187 - 349
Target Start/End: Original strand, 7556 - 7718
Alignment:
Q  187 cttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaa 286  Q
    |||| ||||||| |||| || ||||||||||| | ||||||  ||||||||||||||||  ||||||||||| |||||| || |||| ||||||||||||    
T  7556 cttggttaggtttaatgtgacctttgtcgcacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcatgttgttgttgtttcagtaa 7655  T
Q  287 gcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| |||| ||| || |||| ||||||  ||||| ||||||||||||||||||||| |||||    
T  7656 gcctgaattatatgatttaatgttgttgttaatgtgatataattgtatatacattacttgaat 7718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 209 - 349
Target Start/End: Original strand, 18786748 - 18786888
Alignment:
Q  209 tttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaata 308  Q
    |||||||||| | ||||||  ||||||||||||||||  ||||||||||| |||||| ||||||| ||||||||||||||||||||| ||| ||  |||     
T  18786748 tttgtcgcacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcatgctgttgttgtttcagtaagcctaaattatatgattgaatg 18786847  T
Q  309 ttgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    || |||  ||||||||||| |||||||||||||||||||||    
T  18786848 ttattgataatgttatatagttgtatatacattacatgaat 18786888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 23791567 - 23791410
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||||||| |||| ||||||||||| ||||||||| |||| ||||||||||||||||     
T  23791567 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttgggggttggaaactaagttgtttatcttgttgttgttgtttcagtaagcctg 23791468  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  23791467 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 23791410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 23660511 - 23660408
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  23660511 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 23660412  T
Q  102 ggaa 105  Q
    ||||    
T  23660411 ggaa 23660408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 23076929 - 23076769
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| ||||||||  ||||||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||| ||||    
T  23076929 gatttcgtgattttgactattaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacct 23076830  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||| || || ||||||||  ||||| | |   ||||||||||||||  |||||||||||||    
T  23076829 ggaa-agatttagaatgaaactttggaattctgacctgaactcgccacggcgagtagaggct 23076769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 23286339 - 23286235
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||||||||||||| |||| |||| |||||||||| ||||||| ||||||||||| ||||   ||||||||||| |    
T  23286339 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacat 23286240  T
Q  102 ggaat 106  Q
    |||||    
T  23286239 ggaat 23286235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 23654042 - 23654146
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| |||||||||| ||| |||||||||||||||| |||| | ||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  23654042 gatttcataattttgacttttgagttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 23654141  T
Q  102 ggaat 106  Q
    |||||    
T  23654142 ggaat 23654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 23207570 - 23207413
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||||||| ||| ||||||||||||  ||||||| ||||| |||||  |||||||||     
T  23207570 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatcttgggggtaagaaactaagttgcttatcttactgttgttgttcaagtaagcctg 23207471  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  23207470 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 23207413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 298447 - 298550
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| | ||   |||||||||||||    
T  298447 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacct 298546  T
Q  102 ggaa 105  Q
    ||||    
T  298547 ggaa 298550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 27754064 - 27753961
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||| ||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  27754064 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 27753965  T
Q  102 ggaa 105  Q
    ||||    
T  27753964 ggaa 27753961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18786439 - 18786565
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| ||||||||||| ||||||| |||| |||||||||||| ||||| || | |||||| ||| || || ||||||||||||||    
T  18786439 tgattttgtagttttgacccttaagttgaactttagatgattttgagtgcctgaacacgtatattattgattaggcaagtttttagattgagattgaacc 18786538  T
Q  101 tggaatagtttaagaatgaatttttgg 127  Q
    ||  | ||||||| |||| ||||||||    
T  18786539 tgagaaagtttaaaaatggatttttgg 18786565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 22730866 - 22730968
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| ||||| || ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   ||||||||||||||    
T  22730866 atttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 22730965  T
Q  103 gaa 105  Q
    |||    
T  22730966 gaa 22730968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 23071617 - 23071695
Alignment:
Q  24 agttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||||||||||    
T  23071617 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 23071695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 22459381 - 22459485
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||| |||||||||| || |||||||  || | ||||||  |||||| ||| ||||| |||||||||||| ||||||||||||||||||||||    
T  22459381 aatgccttgtt-aggttaaatgtgacctttgtcctacgagttgatgtgagttgaccttagaggtaagaaactaagttgtttatcttgctgttattgtttc 22459479  T
Q  282 agtaag 287  Q
    ||||||    
T  22459480 agtaag 22459485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 25109181 - 25109024
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| ||| | | ||||||||||||  ||||||| ||||| ||||||||||||||||     
T  25109181 ttaggttaaatgtgacctttgtcgcacgagttgatgtaagttgatcatggggataagaaactaagttgcttatcttactgttgttgtttcagtaagcctg 25109082  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||   ||| | |||||| ||||||| ||||||||||||    
T  25109081 aattatatgatttgatgttgttaataatatgatataaatgtatatgcattacatgaat 25109024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 28291934 - 28292027
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagatt 95  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||| ||| ||||||||||| |||| | |||||||    
T  28291934 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 20309583 - 20309479
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||| ||| |||| |||||||| | |||| ||||||| ||||||||||| ||||   |||||||||||||    
T  20309583 gatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacct 20309484  T
Q  102 ggaat 106  Q
    |||||    
T  20309483 ggaat 20309479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 37760 - 37863
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||| ||||||| ||| ||| |||||||||||| |||| ||||||||||||||| ||||||| |||||||||   ||||   ||||||||||||||    
T  37760 atttcgtatttttgacttttgagtggaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctg 37859  T
Q  103 gaat 106  Q
    ||||    
T  37860 gaat 37863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 22737812 - 22737911
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||| | ||||||| ||||||||||| ||||   |||||||||||||    
T  22737812 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacct 22737911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 22412710 - 22412816
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || | ||||||||||||||||| ||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| |    
T  22412710 ttaagtcgaactttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgga 22412809  T
Q  121 tttttgg 127  Q
    |||||||    
T  22412810 tttttgg 22412816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 23207824 - 23207718
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || | ||||||||||||||||||||||| |||||| ||| || || ||||||||||||||| | | ||||||| |||| |    
T  23207824 ttaagtcgaactttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatgga 23207725  T
Q  121 tttttgg 127  Q
    |||||||    
T  23207724 tttttgg 23207718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 32451562 - 32451664
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||| ||| ||||   ||||||||||| ||    
T  32451562 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatg 32451661  T
Q  103 gaa 105  Q
    |||    
T  32451662 gaa 32451664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 22337604 - 22337501
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| ||| |||| ||| |||||| ||||||||| |||| ||||  ||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  22337604 gatttcgtgattctgacttttgagttgatccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 22337505  T
Q  102 ggaa 105  Q
    ||||    
T  22337504 ggaa 22337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 19672380 - 19672290
Alignment:
Q  13 tttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgg 103  Q
    ||||||| ||||||||||||||||||| |||| ||||  |||| |||||||||||| |||||| ||| || || |||||| ||||||||||    
T  19672380 tttgacccttaagttgaaccttagatgattttgagtgtttgaatatgtataataatgattaggcaagtttttagattgagcttgaacctgg 19672290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 23100863 - 23100916
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  23100863 gatttcgtaattttgacttttgagttgaacctcagatgtttttaagtgcctgaa 23100916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 20519767 - 20519873
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| |  | ||||||||||||||||||||||| |||||| ||| || || ||||||||||||| ||| | |||| || |||| |    
T  20519767 ttaagtcgaactttagatgatcctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaaatgga 20519866  T
Q  121 tttttgg 127  Q
    |||||||    
T  20519867 tttttgg 20519873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7307 - 7407
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| ||||||||| | ||||||| || | |||||||||||| |||||||||| ||| || ||| || || |||| |||||||||    
T  7307 tgattttgtagttttgacccttaagttgatctttagatgattctgagtgcctgaacaagtataataatgattcggcaagtttttagattgtgattgaacc 7406  T
Q  101 t 101  Q
    |    
T  7407 t 7407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 23005263 - 23005183
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaa 113  Q
    |||||||||||| ||||||||||||||||||| ||| |||||| ||| || |  ||||||||||||| ||| | |||||||    
T  23005263 ttagatgtttttgagtgcctgaacatgtataagaatgattaggcaagttttttgattgagattgaacttgggaaagtttaa 23005183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 25109436 - 25109330
Alignment:
Q  21 ttaagttgaaccttagatgtttt-taagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatga 119  Q
    |||||| |||| ||||||| ||| | |||| |||||||||||||||||| |||||| ||| || || ||||||||| ||||||  | ||||||| ||||     
T  25109436 ttaagtcgaactttagatgatttctgagtgactgaacatgtataataatgattaggcaagtttttagattgagattcaacctgcgaaagtttaaaaatgg 25109337  T
Q  120 atttttg 126  Q
    |||||||    
T  25109336 atttttg 25109330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 22740615 - 22740654
Alignment:
Q  24 agttgaaccttagatgtttttaagtgcctgaacatgtata 63  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  22740615 agttgaaccttagatgtttttgagtgcctgaagatgtata 22740654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 22758370 - 22758409
Alignment:
Q  24 agttgaaccttagatgtttttaagtgcctgaacatgtata 63  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  22758370 agttgaaccttagatgtttttgagtgcctgaagatgtata 22758409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 23038518 - 23038468
Alignment:
Q  5 ttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||||||||| ||| || ||||||||||||||| || ||||||||||    
T  23038518 ttcgtaattttgacttttgagatgaaccttagatgttgttgagtgcctgaa 23038468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Original strand, 23071906 - 23071936
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  23071906 aatgttatataattgtatatacattacatga 23071936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 39827602 - 39827648
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaag 79  Q
    ||||||| |||| |||||||||| |||||||||||| ||||||||||    
T  39827602 ttagatgattttgagtgcctgaatatgtataataatgattaggaaag 39827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 44369932 - 44369985
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||| ||||| | || | ||||||||||||||||||||| ||||||||||    
T  44369932 gatttcgtgattttaagctgtgagttgaaccttagatgtttttgagtgcctgaa 44369985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7679786 - 7679746
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtt 41  Q
    ||||||||||  |||||| ||||||||||||||||||||||    
T  7679786 tgatttcgtagatttgacttttaagttgaaccttagatgtt 7679746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Original strand, 22731319 - 22731355
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  22731319 tgcatgagtcggtctaacttgatgaagatgatgatgt 22731355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 22798769 - 22798809
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  22798769 ttttgacttttgagttgaaccttagatgtttttgagtgcct 22798809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 25963356 - 25963400
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  25963356 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 25963400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 45677798 - 45677838
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  45677798 ttttgacttttgagttgaaccttagatgtttttgagtgcct 45677838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 121; Significance: 7e-62; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 2 - 349
Target Start/End: Complemental strand, 130396 - 130040
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||| ||||||||| ||||||||||||||| || | || ||||| ||||||| || |||||||||||||||    
T  130396 gatttcgtaattttgacttttgagttgatcctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacct 130297  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||||||||||||||| |||||||| | ||  |||| |||||||||| ||||| ||||||| ||           |  | ||| ||| |||||||||||    
T  130296 ggaatagtttaagaatggatttttgggaattacacctaaactcgccatggcgagcagaggctctcgcctcgcgagctaactagttacaaaatgccttgtt 130197  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    |||| ||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||| || |    
T  130196 taggataaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactga 130097  T
Q  293 attgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
        ||| |  | || |||||   |||||||||||||||||||||||||||||||||    
T  130096 tgcatatgaattgatgttgtttacaatgttatataattgtatatacattacatgaat 130040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 60289 - 60395
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || | ||||||||||||||||||||||| |||||| ||| || || ||||||||||||| ||| | ||||||| |||| |    
T  60289 ttaagtcgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgga 60388  T
Q  121 tttttgg 127  Q
    |||||||    
T  60389 tttttgg 60395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 358
Target Start/End: Complemental strand, 19755 - 19389
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| | | |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||| ||||| | | |||||||||||||    
T  19755 gattttgtaattttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacct 19656  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtt 192  Q
    ||||   ||| |||||||||||||    |||| ||||||||||||||| ||||| ||||||| ||          |   ||||| ||| |||| |||| |    
T  19655 ggaaagattttagaatgaatttttatgtgttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccagttacagaatgtcttgct 19556  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaa 292  Q
    || ||||||||||||| ||||||||||| ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| |||||||||||| ||| |    
T  19555 tatgttaaatgcgatccttgtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgatgttgttgtttcagtaaccctga 19456  T
Q  293 att-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
     ||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  19455 tttaatatgatctaatgttgttgttaatggtatataattgtatatacattatatgaattatgttgat 19389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 48093 - 48154
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtata 63  Q
    ||||| || |||||||| ||| || |||||||||||||||||| |||| ||||| |||||||    
T  48093 gattttgtgattttgacttttgagatgaaccttagatgtttttgagtgtctgaagatgtata 48154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 133142 - 132848
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  133142 gatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 133043  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc------------tttgtccagtcacataatgcctt 189  Q
    ||||    || |||||||| |||||  |  |||||||||||||||||| ||||| ||||||| ||             |||||   | ||||||||||||    
T  133042 ggaaagactttagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtc---ttacataatgcctt 132946  T
Q  190 gtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||||||||||||| |||||||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||| ||||| ||||| |||||||    
T  132945 gtttaggttaaatgtgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttactgttgttgttccagtaag 132848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 182 - 358
Target Start/End: Complemental strand, 62496 - 62320
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||||| ||||| ||||||| ||||||| | ||| ||||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  62496 aatgccttgtttatgttaa-tgcgatccttgtcgcccgattcgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttc 62398  T
Q  282 agtaagcctaaattg-tataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    ||||||||| ||||| ||| | |||||  |||||  |||||||||||||||||||||||||| |||||| ||| ||||    
T  62397 agtaagcctgaattgttatgaactaatgatgttgttaatgttatataattgtatatacattatatgaattatgttgat 62320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 218
Target Start/End: Complemental strand, 3420 - 3196
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||||    
T  3420 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 3321  T
Q  103 gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgttt 193  Q
    |||||||||||||| ||| || ||| ||||  ||||||||||||||| ||||||||||||  ||          ||| | ||| ||| ||||||||||||    
T  3320 gaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgagtagaggccctcgcctcgtgaattgactagttacagaatgccttgttt 3221  T
Q  194 aggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||    
T  3220 aggttaaatgcgatctttgtcgcac 3196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 7688 - 8044
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||| | |||||||||||||||||||||||| |||| |||||||||| ||||||| ||||||||||||  || | ||||||||||||    
T  7688 tgatttcgtagttttgatccttaagttgaaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacc 7787  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgt 191  Q
    | |||||||||||||||||||||||||  |||  ||||||||||||||||||||||||||||| ||          ||  |  ||  || |||||||||     
T  7788 tagaatagtttaagaatgaatttttgggggttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccttgttccagaatgccttg- 7886  T
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
     |||||||||||||||||||||||||  | ||||||  |||||||||| |||||  ||||||||||| |||||||||||| | ||||| |||| || ||     
T  7887 ctaggttaaatgcgatctttgtcgcaagaattgatgtgagttgatcttagaggtatgaaactaagttgtttatcttgctgatgttgttccagtgagactg 7986  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |  | ||| || | || |||||   ||||| |||||||| |||||||||||| |||||    
T  7987 atgtatatgatttgatgttgtttataatgtgatataattttatatacattacttgaat 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 182 - 349
Target Start/End: Complemental strand, 13068 - 12901
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||  |||||||||| |||||||||||||||||  |||||||||||||| ||||| |    
T  13068 aatgccttgtttaggttaaatgcaatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagtggtttatcttgctgttgttgttcc 12969  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||||||| |||| ||| ||||||| |||||   |||||||||||||||||||||||||||||||||    
T  12968 agtaagcctgaattatatgatctaatgttgttattaatgttatataattgtatatacattacatgaat 12901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8291 - 8191
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||| ||||| |||||| ||| || || ||||||||||||||    
T  8291 tgatttcgtaattttgacctt-aagttgaactttagttgtttctaagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacc 8193  T
Q  101 tg 102  Q
    ||    
T  8192 tg 8191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13332 - 13233
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| |||||||||||||| ||||||||| |||| ||||| | ||||||||||||||||| ||||| |||||| ||| || || ||||||||||||||    
T  13332 tgattttgtaattttgacctt-aagttgaactttagttgtttatgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacc 13234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 28441 - 28735
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  28441 gatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 28540  T
Q  102 g-gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgcct 188  Q
      ||| | |||| ||||||| |||||  |  |||||||||||||||||| ||||| ||||||| ||             ||||   || ||| |||||||    
T  28541 acgaagacttta-gaatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgt---gttacagaatgcct 28636  T
Q  189 tgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||||||||||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||    
T  28637 tgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgtcattgttccagtaag 28735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 287
Target Start/End: Complemental strand, 161173 - 160880
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | | ||||||||||||||    
T  161173 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 161074  T
Q  103 ga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    || | | ||| ||||||||||||||  |  |||||||||| ||||||| ||||||||||||| ||           |  | ||| ||| |||| |||| |    
T  161073 gagagacttt-agaatgaatttttgtgaactgaacctgaagtcgccatggcgagtagaggctctcacctcacgaggtaactagttacagaatgtcttggt 160975  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||| |||||| |||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| ||||||| |||||    
T  160974 taggataaatgtgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgtttcggtaag 160880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 2 - 349
Target Start/End: Original strand, 45421 - 45778
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| |||||||| || ||| |||||| |||||||||||||| |||||||||| |||| ||||||| ||||||||||||||   | |||||||||||||    
T  45421 gattttgtaatttttacttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacct 45520  T
Q  102 gg-aatagtttaagaatgaatttttggt-agttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttg 190  Q
    || || | ||| ||||||||||||| || | ||| ||||||||||||||| ||||||||||||| ||           |  | ||| ||| |||| ||||    
T  45521 ggtaagacttt-agaatgaattttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtcttg 45619  T
Q  191 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 290  Q
    |||||| ||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||||| ||||||| |||||| ||||||| ||    
T  45620 tttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatattgctgtaattgttccagtaagact 45719  T
Q  291 aaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
     |    ||| |  | || |||||   |||||||||||||||||||||||| ||||||||    
T  45720 gatgcatatgaattgatgttgtttataatgttatataattgtatatacatcacatgaat 45778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 358
Target Start/End: Original strand, 2037 - 2214
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||| ||||||||||| |||||| |||||||||||||| |||||||    
T  2037 aatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaaataagttgtttatcttgctgttgttgtttc 2136  T
Q  282 agtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    ||||||||| | ||  ||| ||| ||| ||||||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  2137 agtaagcctgatttaatatgatccaatgttgttgttaatggtatataattgtatatacattatatgaattatgctgat 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 89; Significance: 9e-43; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 182 - 349
Target Start/End: Complemental strand, 100676 - 100508
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||||| || ||||||||||||||||||||||| | ||||||  | ||| |||| |||||||||||||||||| ||||||||| |||| |||||||    
T  100676 aatgccttgtctaagttaaatgcgatctttgtcgcacgagttgatgtgacttgctcttagaggttagaaactaagttgtttatcttgttgttgttgtttc 100577  T
Q  282 agtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||||||||||||  ||| ||||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  100576 agtaagcctaaattaatatgatctaatgttgttgttaatgttatataattgtatatacattatatgaat 100508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 62 - 358
Target Start/End: Original strand, 39864 - 40170
Alignment:
Q  62 taataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagagg 161  Q
    |||||||  ||||||||||||| | ||||| ||| |||||||||||||||||||| ||| || ||| ||||  ||||||||| ||||| || ||||||||    
T  39864 taataatggttaggaaagattggagattgacattcaacctggaatagtttaagaacgaacttgtgggagttatacctgaacttgccatggcaagtagagg 39963  T
Q  162 ctatctt---------tgtccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaac 252  Q
    || ||           |  | ||| ||| |||||||| ||||||||||||||||||||||| |||| | ||||||  |||||||||| ||||||||||||    
T  39964 ctctcgcctcgcgagctaactagttacaaaatgccttatttaggttaaatgcgatctttgttgcacgagttgatgtgagttgatcttagaggttagaaac 40063  T
Q  253 taagttatttatcttgctgttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatca 351  Q
    |||||| |||| |||| |||| |||||||||||||||| ||||  ||| |||| || ||||||  |||| ||||||||||||||||||||| |||||| |    
T  40064 taagttgtttaccttgatgttgttgtttcagtaagcctgaattaatatgatcttatgttgttgttaatggtatataattgtatatacattatatgaatta 40163  T
Q  352 tgatgat 358  Q
    || ||||    
T  40164 tgttgat 40170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 101883 - 101723
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||||||||| || ||| |||||| ||||||| |||||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  101883 gatttcgtaatttttacttttgagttgatccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 101784  T
Q  102 gga-atagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||| | | ||| ||||||||||||  | | ||| ||||||||||||||| ||||| |||||||    
T  101783 ggagagacttt-agaatgaattttgtgaacttg-acctgaactcgccatggcgagcagaggct 101723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 101690 - 101619
Alignment:
Q  187 cttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagtt 258  Q
    ||||||||||||||||| |||| ||||||||| | ||||||  |||||||||| ||||||||||||||||||    
T  101690 cttgtttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagtt 101619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 39641 - 39696
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaaca 57  Q
    |||||| |||||||||| ||| |||||| |||||||||||||  ||||||||||||    
T  39641 gatttcataattttgacttttgagttgatccttagatgttttcgagtgcctgaaca 39696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 287
Target Start/End: Complemental strand, 32572 - 32288
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| ||| |||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  32572 gattttgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 32473  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||    || |||||||| |||||  |  |||||||||||||||||| ||||| ||||||| ||          |  |   || |||||||||||||||    
T  32472 ggaaagactttagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcacctcgcgagtacttgtgttacataatgccttgtt 32373  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaag 287  Q
    |||||||||||||||||||||||||          |||||||||||| |||||||||||||||||| |||||||| ||||| ||||| |||||||    
T  32372 taggttaaatgcgatctttgtcgca----------ctagttgatcttagaggttagaaactaagttgtttatcttactgttgttgttccagtaag 32288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 84; Significance: 8e-40; HSPs: 3)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 172 - 349
Target Start/End: Original strand, 7886 - 8059
Alignment:
Q  172 ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 271  Q
    ||||| ||| ||||||||||| ||| ||||||||||||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||||||    
T  7886 ccagttacaaaatgccttgtt-agggtaaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatcttgctg 7984  T
Q  272 ttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
       |||||||||||||||| |||| ||| || |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  7985 ---ttgtttcagtaagcctgaattatatgatttaatgttgttgataatgttatatagttgtatatacattacatgaat 8059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 28912 - 29011
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| |||  ||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  28912 gattttgtaattttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 29011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 29100 - 29204
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||| ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |||| |    
T  29100 aatgcctt-tttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgttcc 29198  T
Q  282 agtaag 287  Q
    ||||||    
T  29199 agtaag 29204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 84; Significance: 8e-40; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 43438 - 43577
Alignment:
Q  24 agttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaattt 123  Q
    ||||||||||||||||||||| ||||||||||||||| |||| || ||||| ||||||| || |||||||||||||||||||||||||||||||| ||||    
T  43438 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggattt 43537  T
Q  124 ttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||| ||||  ||||| |||||||||  ||||||||||||    
T  43538 ttgggagttacacctgtactcgccatgacgagtagaggct 43577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 47358 - 47497
Alignment:
Q  24 agttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaattt 123  Q
    ||||||||||||||||||||| ||||||||||||||| |||| || ||||| ||||||| || |||||||||||||||||||||||||||||||| ||||    
T  47358 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggattt 47457  T
Q  124 ttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |||| ||||  ||||| ||| |||||  ||||||||||||    
T  47458 ttgggagttacacctgtactagccatgacgagtagaggct 47497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 84; Significance: 8e-40; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 172 - 358
Target Start/End: Original strand, 14506 - 14693
Alignment:
Q  172 ccagtcacataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctg 271  Q
    ||||| ||| ||||||||||||||| ||||||||||||| ||||||||| ||||||  |||||||||| |||||||||||||||||| | ||||||||||    
T  14506 ccagttacagaatgccttgtttaggataaatgcgatcttggtcgcacaagttgatgtgagttgatcttagaggttagaaactaagttgtatatcttgctg 14605  T
Q  272 ttattgtttcagtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    || |||||||||||||||| | ||  ||| ||||||| || |||  |||| |||||||| |||||||||||| |||||| ||| ||||    
T  14606 ttgttgtttcagtaagcctgatttaatatgatctaatgtttttgttaatggtatataatagtatatacattatatgaattatgttgat 14693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 30379 - 30428
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||||||||||||||| ||| |||||||||||||||| |||| |||||||    
T  30379 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 30428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 279
Target Start/End: Complemental strand, 619 - 334
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| | |||| |||||||  ||||| ||||||| ||||||| ||||||| |||||||||||||| | | ||||||||||| |    
T  619 gatttcgtaattttgacttttgaattgatccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaactt 520  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatc---------tttgtccagtcacataatgccttgtt 192  Q
    ||||   ||| ||||||||||||||  ||||| ||||||||||||||| ||||| ||||||| ||          |   ||||| ||| |||| |||| |    
T  519 ggaaagattttagaatgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgtcttgct 420  T
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 279  Q
    || |||||||||||||||||||| || | ||||||  |||||||||| ||||||||||||| ||||  ||||||||||||| |||||    
T  419 tatgttaaatgcgatctttgtcgtacgagttgatgtgagttgatcttagaggttagaaactgagtt-gttatcttgctgttgttgtt 334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 349
Target Start/End: Complemental strand, 292 - 264
Alignment:
Q  321 ttatataattgtatatacattacatgaat 349  Q
    |||||||||||||||||||||||||||||    
T  292 ttatataattgtatatacattacatgaat 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 6082 - 5964
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||| || ||||||| |||||||||||||| | ||||||||||||| |    
T  6082 gatttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaactt 5983  T
Q  102 ggaatagtttaagaatgaa 120  Q
    |||||||||||||||||||    
T  5982 ggaatagtttaagaatgaa 5964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 182 - 358
Target Start/End: Complemental strand, 5944 - 5768
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||| |||||| |||  ||||||||||| ||||||  |||||||||| ||||||| |||||||||| ||||||||| |||| |||||||    
T  5944 aatgccttatttaggctaaatgtgattcttgtcgcacaagttgatgtgagttgatcttagaggttaaaaactaagtt-tttatcttgttgttgttgtttc 5846  T
Q  282 agtaagcctaaatt-gtataatctaatattgttgcgaatgttatataattgtatatacattacatgaatcatgatgat 358  Q
    ||||||||| ||||  ||| ||||||| ||||||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  5845 agtaagcctgaattaatatgatctaatgttgttgttaatggtatataattgtatatacattatatgaattatgttgat 5768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 75; Significance: 2e-34; HSPs: 7)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 136196 - 136354
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || |||||||| || | ||||||  ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||     
T  136196 ttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 136295  T
Q  292 aattgtat-aatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| | | |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  136296 aattatatgattttaatgttgttgttaatgttatatagttgtatatacattacatgaat 136354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 144904 - 145062
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || |||||||| || | ||||||  ||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||     
T  144904 ttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggtaggaaactaagttgtttatcttgctgttgttgtttcagtaagcctg 145003  T
Q  292 aattgtat-aatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| | | |||| ||||||  ||||||||||| |||||||||||||||||||||    
T  145004 aattatatgattttaatgttgttgttaatgttatatagttgtatatacattacatgaat 145062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 63050 - 62913
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||||| |||||| ||| |||||| |||||||||||||| ||||| ||||||||| ||||||| |||||||||||||| | | |||||||||||||    
T  63050 gatttcgtaaatttgacttttgagttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 62951  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctg 139  Q
    ||||   ||| ||||||||||||||  ||||| |||||    
T  62950 ggaaatattttagaatgaatttttgtgagttgcacctg 62913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 135942 - 136048
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||||||||| |  | | ||||| ||||||||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| ||||||    
T  135942 ttaagtcgaaccttagaggactctgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaa 136041  T
Q  121 tttttgg 127  Q
    |||||||    
T  136042 tttttgg 136048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 144650 - 144756
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||||||||| |  | | ||||| ||||||||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| ||||||    
T  144650 ttaagtcgaaccttagaggactctgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaa 144749  T
Q  121 tttttgg 127  Q
    |||||||    
T  144750 tttttgg 144756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 125071 - 124988
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgta 85  Q
    ||||| || |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  125071 gatttggtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgta 124988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 175253 - 175202
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctg 53  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| ||||||||    
T  175253 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctg 175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 2 - 290
Target Start/End: Original strand, 2435 - 2731
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| |||||||||| |||  | ||| ||||||||| |||| ||| ||||||||||| ||||||| |||||||||||||| | | |||| ||||||||    
T  2435 gatttcataattttgacttttgggatgatccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacct 2534  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgcctt 189  Q
    | ||   ||| |||||||| |||  | | | ||||||||||||||||| ||||||||||||| ||             ||||   || ||| ||||||||    
T  2535 gtaaagattttagaatgaaatttgtgaact-gaacctgaactcgccatggcgagtagaggctctcgcctcgcgagtacttgt---gttacagaatgcctt 2630  T
Q  190 gtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcc 289  Q
    |||||||  ||||| |||| ||||||||| | ||||||  |||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  2631 gtttaggaaaaatgtgatccttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcc 2730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 103467 - 103624
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || |||||||| || | ||||||  ||||||||||||||||  ||||||||||| |||||||| ||||| ||||||||||||||||     
T  103467 ttaggttaaatgtgacctttgtcgtacgagttgatgtgagttgatcttggaggtaggaaactaagttctttatcttcctgttgttgtttcagtaagcctg 103566  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || |||| ||||||  |||||||| || |||||||||||||||||||||    
T  103567 aattatatgatttaatgttgttgttaatgttatgtagttgtatatacattacatgaat 103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 103234 - 103340
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||||||||| | || | ||||||||||||||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| ||||||    
T  103234 ttaagtcgaaccttagaggattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaa 103333  T
Q  121 tttttgg 127  Q
    |||||||    
T  103334 tttttgg 103340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 227982 - 227851
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||||| ||||| |||   ||| ||| |||| ||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||    
T  227982 tgatttcgtagttttgacccttaagctgatatttaaatgattttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacc 227883  T
Q  101 tggaatagtttaagaatgaatttttggtagtt 132  Q
    |||||||||||||||||| |||||||| ||||    
T  227882 tggaatagtttaagaatggatttttgggagtt 227851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 349
Target Start/End: Original strand, 10283 - 10527
Alignment:
Q  113 agaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct---------ttgtccagtcacataatgccttgtttaggttaaatg 203  Q
    ||||||||||||||  ||||  |||||||||||||| |||||||||||||| ||          |||||| || ||||| ||||||||| ||||||||||    
T  10283 agaatgaatttttgtgagttacacctgaactcgccaaagcgagtagaggctctcgcctcgcgagttgtcctgttacatactgccttgtt-aggttaaatg 10381  T
Q  204 cgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatc 303  Q
    |||||||||| |||| | ||||||  |||||||||| |||||||||||||||||| ||||||||| |||| ||||| ||||||| || |    ||| |      
T  10382 cgatctttgttgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaat 10481  T
Q  304 taatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    | || |||||   |||||||||||||||||||||||||||||||||    
T  10482 tgatgttgtttataatgttatataattgtatatacattacatgaat 10527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10199 - 10280
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagatt 82  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||| ||||||| ||||| |||||||    
T  10199 tgatttcgtaattttgacctttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagatt 10280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 1068 - 965
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| ||||||||||||||||| ||| |||||  |||||||| ||||| | |||||||  || |||||  |||||| | ||||    
T  1068 gatttcgtatttttgacttttgagttgaaccttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaagatgagataggacct 969  T
Q  102 ggaa 105  Q
    ||||    
T  968 ggaa 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 12485 - 12329
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||||||| |||||| | |||||||||   ||||||| |||| |||| |||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  12485 tgatttcgtagttttgatccttaagttgatatttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacc 12386  T
Q  101 tggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtag 158  Q
    |||||||| ||||||||| |||||| | ||||  | ||||| | ||||||||||||||    
T  12385 tggaatag-ttaagaatggattttttggagttacaactgaatttgccatagcgagtag 12329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 182 - 349
Target Start/End: Complemental strand, 1383 - 1217
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    ||||||||||| ||||||||||||||||||||| ||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||| |||| ||||| |    
T  1383 aatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttgatcttagaggtaagaaactaagttttttatcttgttgttgttgttcc 1285  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||||| || |  | ||| || | || ||||||  ||||||||||| ||||||||||||| |||||||    
T  1284 agtaagactgatgtatatgatttgatgttgttgttaatgttatatagttgtatatacattccatgaat 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 39248 - 39145
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| || ||||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  39248 gatttcgtaattttgactttgaagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 39149  T
Q  102 ggaa 105  Q
    ||||    
T  39148 ggaa 39145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 32978 - 32942
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatgatgt 396  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  32978 tgcatgagtcggtctaacttgatgaagatgatgatgt 32942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 20058 - 20218
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| | |||||| ||| |||||| ||||||||| |||| ||| ||||||||||| ||||||| | ||||||||| |||| | |||||||||||||    
T  20058 gatttcgtgaatttgacttttgagttgatccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacct 20157  T
Q  102 ggaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||| ||  ||||||||||| ||||||| || || ||||||||||||||| |||||||||||||    
T  20158 ggatta-attaagaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggct 20218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 65426 - 65479
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||| ||| ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  65426 gattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 65479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 298 - 141
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||||| ||||||  |||||||| ||| ||| ||||||||||||   |||||| ||||| |||||||||||||||||    
T  298 ttaggttaaatgtgacctttgtcgcacaagttgatgtgagttgatcatgggggtaagaaactaagttgcatatcttactgttgttgtttcagtaagccta 199  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    ||||  || || | || |||||   |||||||||||| ||||||| ||||||||||||    
T  198 aattaaatgatttgatgttgttaataatgttatataaatgtatatgcattacatgaat 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 537 - 446
Alignment:
Q  36 gatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    |||| |||| ||||| |||| |||||||||||| |||| | ||| || || ||||||||||||||||  | ||||||| |||| ||||||||    
T  537 gatgattttgagtgcttgaatatgtataataatgattacgcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttgg 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 414 - 310
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||| ||    
T  414 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatct 315  T
Q  102 ggaat 106  Q
    |||||    
T  314 ggaat 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 5190 - 5086
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||| ||    
T  5190 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatct 5091  T
Q  102 ggaat 106  Q
    |||||    
T  5090 ggaat 5086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 61; Significance: 4e-26; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 34609 - 34509
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  34609 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 34510  T
Q  102 g 102  Q
    |    
T  34509 g 34509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 13581 - 13485
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaa 98  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| |||| || ||||||||||| ||||   ||||||||||    
T  13581 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaa 13485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 34425 - 34317
Alignment:
Q  178 acataatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattg 277  Q
    ||||||| |||| |||||||| |||||||||||||| |  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| |     
T  34425 acataattcctt-tttaggttgaatgcgatctttgttgttctagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatt 34327  T
Q  278 tttcagtaag 287  Q
    || |||||||    
T  34326 ttccagtaag 34317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 2717 - 2820
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  2717 gatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 2816  T
Q  102 ggaa 105  Q
    ||||    
T  2817 ggaa 2820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 343
Target Start/End: Complemental strand, 12860 - 12709
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | | ||||  |||||||||| ||||| | |||||||||| |||||||||||||| ||||||||||||| |||    
T  12860 ttaggttaaatgtgacctttgtcgcacgagtggatgtgagttgatcttagaggtaataaactaagttgtttatcttgctgttgttgtttcagtaagtcta 12761  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattac 343  Q
    |  ||||| || | || |||||   ||||| |||||||||||||||||||||    
T  12760 atgtgtattatttgatgttgtttataatgtgatataattgtatatacattac 12709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 15251 - 15408
Alignment:
Q  6 tcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||| |||||||| ||| |||||| ||||||||| |||| |||||||||| |||| ||||||| ||||||||||| |||| | |||||||||| |||| |    
T  15251 tcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctgg-a 15349  T
Q  106 tag-tttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    ||| ||| ||||||||  ||||| | |   ||||||||||||||||||||| |||||||    
T  15350 tagattttagaatgaaactttgggaatctgacctgaactcgccatagcgagcagaggct 15408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 13123 - 13008
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    |||||||| ||||||||||| ||||||| |||| ||||||||| |||||||| |||| |||||| ||| || || ||||||||||||||||  | |||||    
T  13123 ttttgacccttaagttgaactttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacctgagaaagttt 13024  T
Q  112 aagaatgaatttttgg 127  Q
    || |||| ||||||||    
T  13023 aaaaatggatttttgg 13008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 27284 - 27399
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    |||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||| |||||| ||| || ||  |||||||||||||||| | | |||    
T  27284 ttttgacccttaagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgggaaatttt 27383  T
Q  112 aagaatgaatttttgg 127  Q
    ||||||| ||||||||    
T  27384 aagaatggatttttgg 27399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 3949 - 3855
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaat 106  Q
    ||||||| ||| ||||||||||||||||  ||| ||||||||||||||  || |||| ||||||||||| ||||   ||||||||||||||||||    
T  3949 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaat 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 8013 - 7919
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaat 106  Q
    ||||||| ||| ||||||||||||||||  ||| ||||||||||||||  || |||| ||||||||||| ||||   ||||||||||||||||||    
T  8013 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaat 7919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 393 - 232
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||| |||||||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  393 gatttcgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 294  T
Q  102 ggaatagtttaagaatgaatttttggtagtt-gaacctgaactcgccatagcgagtagaggct 163  Q
    |||| || || ||||||||  |||   ||||   |||||||||||||| ||||||||||||||    
T  293 ggaa-agatttagaatgaaactttttgagttctgacctgaactcgccacagcgagtagaggct 232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 13677 - 13571
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || ||||||||||||||||||||||||| |||||| ||| || || ||||||||||||||||| | |||||||||||| |    
T  13677 ttaagtcgaactttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaagaatgga 13578  T
Q  121 tttttgg 127  Q
    |||||||    
T  13577 tttttgg 13571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 3233 - 3134
Alignment:
Q  28 gaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    |||||||||||| |||| |||||||||| ||||| |||||| |||||| ||| || || ||||||||||||| ||| | ||||||| |||| ||||||||    
T  3233 gaaccttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttgg 3134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 59; Significance: 7e-25; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 4997 - 4835
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||| ||||| |||| | |||||||||||||    
T  4997 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacct 4898  T
Q  102 gg-aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || || | ||| ||||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  4897 ggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 4835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 12579 - 12417
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||| ||||| |||| | |||||||||||||    
T  12579 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacct 12480  T
Q  102 gg-aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || || | ||| ||||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  12479 ggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 12417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 22531 - 22369
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||| ||||| |||| | |||||||||||||    
T  22531 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacct 22432  T
Q  102 gg-aatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || || | ||| ||||||||  ||||| | |   ||||||||||||||| ||||| |||||||    
T  22431 ggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggct 22369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 18286 - 18326
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  18286 ttttgacttttgagttgaaccttagatgtttttgagtgcct 18326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 267
Target Start/End: Original strand, 1934 - 2207
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    |||||||| ||||||| ||| |||||| |||||||||||||| |||  |||||||||| ||||||| |||||||||||||| | | ||||||||||| |     
T  1934 atttcgtatttttgacttttgagttgatccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacata 2033  T
Q  103 gaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggctatct------------ttgtccagtcacataatgccttg 190  Q
     ||    || |||||||| |||||  |  |||||||||||||||||| || || ||||||| ||             ||||   || ||| |||||||||    
T  2034 aaaagactttagaatgaaattttgtgaactgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagtacttgt---gttacagaatgccttg 2130  T
Q  191 tttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatctt 267  Q
    |||||||||||||||||| ||||||||| | | ||||  |||| ||||| |||||||||||||||||| ||||||||    
T  2131 tttaggttaaatgcgatccttgtcgcacgagtggatgtgagttaatcttagaggttagaaactaagttgtttatctt 2207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 12416 - 12257
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| | |||| ||||||||| |||| |||| ||||| |||| ||||||| ||||||||||| |||| | ||||||||||||||    
T  12416 atttcgtgattttgacttttgaattgatccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12317  T
Q  103 gaatagtttaagaatgaa-tttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    || ||  ||||||||||| ||||||| |  || ||||||||||||||| |||||||||||||    
T  12316 gatta-attaagaatgaactttttggaaactg-acctgaactcgccatggcgagtagaggct 12257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 594 - 695
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| |||||||||||||||| |  ||||||||||||    
T  594 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacct 693  T
Q  102 gg 103  Q
    ||    
T  694 gg 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 8124 - 8240
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||  | | |||| |||||| ||||||| | || ||||||||||||| |||||| |||||| ||| || || | ||||||||||| |    
T  8124 gatttcgtgattttgagttgtgagtttaaccttggatgtttatgagggcctgaacatgtacaataatgattaggcaaggttttagaatgagattgaactt 8223  T
Q  102 ggaatagtttaagaatg 118  Q
    |||||||| | ||||||    
T  8224 ggaatagtgtcagaatg 8240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 17268 - 17167
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||||||||||    
T  17268 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17169  T
Q  103 ga 104  Q
    ||    
T  17168 ga 17167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 32591 - 32752
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||| |||||||||||| |||| |||| |||||||||| ||||||| |||||||| || || | | |||||||||||||    
T  32591 gatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacct 32690  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    | ||   ||| ||||||||||||||  ||||| |||  ||||||||| |||||| |||||||    
T  32691 gtaaagattttagaatgaatttttgtgagttgcaccctaactcgccacagcgaggagaggct 32752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 46414 - 46253
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||| |||||||||||| |||| |||| |||||||||| ||||||| |||||||| || || | | |||||||||||||    
T  46414 gatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacct 46315  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    | ||   ||| ||||||||||||||  ||||| |||  ||||||||| |||||| |||||||    
T  46314 gtaaagattttagaatgaatttttgtgagttgcaccctaactcgccacagcgaggagaggct 46253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 16566 - 16473
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||||||| ||| |||||| ||||||  | |||| ||||||||||||||| ||||||| ||||||||||| ||||    ||||||||||||||||    
T  16566 attttgacttttgagttgatccttagg-gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaa 16473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 58; Significance: 3e-24; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 2340 - 2175
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  2340 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 2241  T
Q  102 ggaatagtttaagaatg-aatttttggtagttgaacctgaactcgccatagcgagtagaggctatc 166  Q
    ||||   ||  |||||| || || ||| | |   ||||||||||||||| ||||||||||||||||    
T  2240 ggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatc 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 207161 - 207254
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    ||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | ||||||| ||| ||||   |||||||||||||||||    
T  207161 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaa 207254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 119202 - 119280
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||||||| ||||||| |||| |||||||||| |||||||||||| |||||  ||| || || |||||||||||||    
T  119202 ttaagttgaacattagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattgaac 119280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 207339 - 207375
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    ||||| |||||||||||||||||||||||||||||||    
T  207339 aatgctttgtttaggttaaatgcgatctttgtcgcac 207375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 4774 - 4878
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  4774 gatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 4873  T
Q  102 ggaat 106  Q
    |||||    
T  4874 ggaat 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 695 - 799
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| |||||||||| |||| ||||||| ||||||||||| ||||   |||||||||||||    
T  695 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacct 794  T
Q  102 ggaat 106  Q
    |||||    
T  795 ggaat 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 9555 - 9404
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgg-aatagtt 110  Q
    ||||||| ||| || ||| ||||||||| |||| |||||||||||| || ||||||  ||||||||||| |||| | |||||||| |||||| || ||||    
T  9555 ttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtt 9456  T
Q  111 taagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    | ||||||||||||||  |  |||||||||||||||||| |||||||||||||    
T  9455 t-agaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggct 9404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 10069 - 10173
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| | |||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  10069 gatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 10168  T
Q  102 ggaat 106  Q
    |||||    
T  10169 ggaat 10173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 13973 - 13869
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||  ||||   |||||||||||||    
T  13973 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacct 13874  T
Q  102 ggaat 106  Q
    |||||    
T  13873 ggaat 13869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 13240 - 13340
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   ||||||||| |||    
T  13240 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcct 13339  T
Q  102 g 102  Q
    |    
T  13340 g 13340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 16757 - 16657
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||    ||||||||||||    
T  16757 gatttcgtacttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacct 16658  T
Q  102 g 102  Q
    |    
T  16657 g 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 2077 - 2177
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| |||||||||||  || |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  2077 gattttgtaattttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 2176  T
Q  102 g 102  Q
    |    
T  2177 g 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 2265 - 2369
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||| ||||||||||||| ||  | | || |||  |||||||||| |||||||||||||||||| |||| |||||| ||| |||| |    
T  2265 aatgcctt-tttaggttgaatgcgatctttgccgttcgagtttatgtgagttgatcttagaggttagaaactaagttttttaccttgctattaatgttcc 2363  T
Q  282 agtaag 287  Q
    ||||||    
T  2364 agtaag 2369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 21379 - 21275
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||||| ||||   |||||||| ||||    
T  21379 gattttgtaattttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacct 21280  T
Q  102 ggaat 106  Q
    |||||    
T  21279 ggaat 21275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 53102 - 53214
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacc 100  Q
    |||||| ||| |||||||| ||||||||||| ||||||| |||| |||||||||||| |||||||||| |||||| ||| || || ||||||||||||||    
T  53102 tgattttgtatttttgacccttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacc 53201  T
Q  101 tggaatagtttaa 113  Q
    ||| | |||||||    
T  53202 tgggaaagtttaa 53214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 7926 - 8029
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||    
T  7926 gattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 8025  T
Q  102 ggaa 105  Q
    ||||    
T  8026 ggaa 8029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 349
Target Start/End: Original strand, 53393 - 53534
Alignment:
Q  208 ctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaat 307  Q
    ||||||||||| | ||||||  |||||||||| ||||| |||||||||||| ||||||||  ||||  |||| ||||||| || |  | ||| || | ||    
T  53393 ctttgtcgcacgagttgatgtgagttgatcttagaggtaagaaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgat 53492  T
Q  308 attgttgcgaatgttatataattgtatatacattacatgaat 349  Q
     |||||   ||||| ||||||||||||||||||||| |||||    
T  53493 gttgtttataatgtgatataattgtatatacattacttgaat 53534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 8114 - 8150
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||||||||||||||    
T  8114 aatgccttgtttaggttaaatgcgatctttgtcgcac 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 692 - 791
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| | ||   |||||||||||||    
T  692 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 20892 - 20789
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  20892 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 20793  T
Q  102 ggaa 105  Q
    ||||    
T  20792 ggaa 20789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 16231 - 16334
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| | || | |||||||||||||    
T  16231 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacct 16330  T
Q  102 ggaa 105  Q
    ||||    
T  16331 ggaa 16334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 167622 - 167721
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| | ||   |||||||||||||    
T  167622 gatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacct 167721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 52392 - 52298
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||||||    
T  52392 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 52298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 80808 - 80702
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| |||| ||||||||||||||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| |    
T  80808 ttaagtcgaactttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgga 80709  T
Q  121 tttttgg 127  Q
    |||||||    
T  80708 tttttgg 80702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 349
Target Start/End: Complemental strand, 78614 - 78457
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||  | ||||||  |||||||| ||| ||| || |||||||||  ||||||| ||||| ||||||||||||||||     
T  78614 ttaggttaaatgtgacctttgtcgcatgagttgatgtgagttgatcatgggggtaagcaactaagttgcttatcttactgttgttgtttcagtaagcctg 78515  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  78514 aattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaat 78457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 128557 - 128651
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||| ||||||||||||||| |||||||||||| |||||| ||| |   | ||||||||||||||||||| ||||||  |||| ||||||||    
T  128557 ttagatgattttaagtgcctgaatatgtataataatgattaggcaagttatgagattgagattgaacctggaaaagtttataaatggatttttgg 128651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 349
Target Start/End: Original strand, 128837 - 128955
Alignment:
Q  230 agttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgtataatctaatattgttgcgaatgttatataat 329  Q
    |||||||| ||| ||| ||||||||||||  ||||||| ||||| |||||||||||||||| | ||  || || | || |||||   ||||| ||||| |    
T  128837 agttgatcatgg-ggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctgatttagatgatttgatgttgttaataatgtgatatatt 128935  T
Q  330 tgtatatacattacatgaat 349  Q
    ||||||| ||||||||||||    
T  128936 tgtatatccattacatgaat 128955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 268196 - 268094
Alignment:
Q  23 aagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatt 122  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||| |||||| ||| || || ||||||||||||||||| | ||||||| |||| |||    
T  268196 aagttgaactttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatt 268097  T
Q  123 ttt 125  Q
    |||    
T  268096 ttt 268094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 54; Significance: 7e-22; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 15108 - 15213
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||||||||||||| |||||| |||| ||||||| || |||| ||||||| ||||||||||| ||||   |||||||||||||    
T  15108 gatttcgtatttttgacttttaagttgaaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacct 15207  T
Q  102 ggaata 107  Q
    ||||||    
T  15208 ggaata 15213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 32908 - 32966
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgt 60  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| | |||||||||||||    
T  32908 gatttcgtatttttgacttttgagttgaaccttagatgcttttgaatgcctgaacatgt 32966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 7766 - 7726
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| |||||||||||||||| |||| |||||||    
T  7766 ttttgacctttgagttgaaccttagatgcttttgagtgcct 7726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 24171 - 24268
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatg 118  Q
    |||||||||| |||||||| |||| |||||||||| || ||||||||| |||||| ||| || || ||||||||||||||||||||||||||| ||||    
T  24171 ttaagttgaagcttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaatagtttaaaaatg 24268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 1719 - 1870
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtt 110  Q
    |||||||| ||| |||||| ||||||||||||| | |||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||||||   ||    
T  1719 attttgacttttgagttgatccttagatgttttga-gtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatt 1817  T
Q  111 taagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    | ||||||||  ||||| | |   ||||||| ||||||| ||||| |||||||    
T  1818 ttagaatgaaactttggaaatctgacctgaattcgccatggcgagcagaggct 1870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 5326 - 5222
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| ||| |||||||||||||||| |||| ||||| |||| |||| ||||||| ||||||||||| ||||   |||||||||||||    
T  5326 gattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacct 5227  T
Q  102 ggaat 106  Q
    |||||    
T  5226 ggaat 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 32542 - 32438
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||| | ||||||||| |||    |||||||||||||    
T  32542 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacct 32443  T
Q  102 ggaat 106  Q
    |||||    
T  32442 ggaat 32438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 831 - 732
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||| ||||| |||| | |||||||||||||    
T  831 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacct 732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 3959 - 3855
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| | ||||||| |||| |||| |||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  3959 gatttcgtgattttgacttttgagttgatctttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 3860  T
Q  102 ggaat 106  Q
    |||||    
T  3859 ggaat 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 25707 - 25858
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    ||||||| ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||| ||   ||     
T  25707 ttttgacttttgagttgatccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattg 25806  T
Q  112 aagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
     ||||||||||||||| | |   ||||||||||||||  ||||| |||||||    
T  25807 tagaatgaatttttggaaatctgacctgaactcgccacggcgagcagaggct 25858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 33126 - 33229
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| ||||| || ||| |||||| ||||||||| || | |||||||| |||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  33126 gatttcgtgattttcacttttgagttgatccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 33225  T
Q  102 ggaa 105  Q
    ||||    
T  33226 ggaa 33229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 20601 - 20498
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| | | |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | | |||||||||||    
T  20601 gatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacct 20502  T
Q  102 ggaa 105  Q
    ||||    
T  20501 ggaa 20498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 17640 - 17742
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||||||| ||| |||| ||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  17640 gatttcatgattttgacttttgagttaaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 17739  T
Q  102 gga 104  Q
    |||    
T  17740 gga 17742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 14118 - 14004
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    ||||| || ||||||||||||||||||| |||| |||||||||| |||||||||||| |||||| ||| || || |||||||||| |||||| |  ||||    
T  14118 ttttgtcccttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctggtaatgttt 14019  T
Q  112 aagaatgaatttttg 126  Q
    || |||| |||||||    
T  14018 aaaaatggatttttg 14004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 11178 - 11260
Alignment:
Q  24 agttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaat 106  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||| ||||||||||| ||||   ||||||||||||||||||    
T  11178 agttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 11260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 78994 - 79096
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| |||||| |||| ||| |||||||||||||||| |||| ||||| ||||||||| ||||||| |||||||| || |||| | |||||||||||||    
T  78994 gattttgtaattctgacttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacct 79093  T
Q  102 gga 104  Q
    |||    
T  79094 gga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 16869 - 16950
Alignment:
Q  24 agttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaa 105  Q
    |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||||||||    
T  16869 agttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 5753 - 5854
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||  |||| || ||| |||||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||   |||||||||||||    
T  5753 gatttcgtgttttttacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacct 5852  T
Q  102 gg 103  Q
    ||    
T  5853 gg 5854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 349
Target Start/End: Original strand, 6111 - 6268
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  || ||||| ||| ||| ||||||||||||  ||||||  ||||| ||||||||||||||||     
T  6111 ttaggttaaatgtgacctttgtcgcacgagttgatgtgagatgatcatgggggtaagaaactaagttgcttatctcactgttgttgtttcagtaagcctg 6210  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||| ||| || | || |||||   ||||| |||||| ||||||| ||||||||||||    
T  6211 aattatatgatttgatgttgttattaatgtgatataaatgtatatgcattacatgaat 6268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 50; Significance: 2e-19; HSPs: 5)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 347
Target Start/End: Complemental strand, 15959 - 15795
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttc 281  Q
    |||||||| |||||||  ||||||||||||||||  | | ||||||  |||||||||| |||||||||||||||||| |||| |||||||||| || | |    
T  15959 aatgcctt-tttaggtggaatgcgatctttgtcgttcgagttgatgtgagttgatcttagaggttagaaactaagttgtttaccttgctgttaatgatcc 15861  T
Q  282 agtaagcctaaattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    |||||| || | |  ||| |  |||| ||| |   |||||||||||||||||||||||||||||||    
T  15860 agtaagactgattcttatgaaataatgttgcttataatgttatataattgtatatacattacatga 15795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 16147 - 16047
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| ||||||||||| ||  |||||| ||||||||| |||| |||||||||| |||| ||||||| ||||||||||| |||| | |||||||||||||    
T  16147 gattttgtaattttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacct 16048  T
Q  102 g 102  Q
    |    
T  16047 g 16047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 1826 - 1768
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgt 60  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||    
T  1826 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 17917 - 18021
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    ||||||||||||||||||  |||| ||||| |||| |||||||||||| |||||| ||| || || |||||||||| |||||| |  |||||| |||| |    
T  17917 ttaagttgaaccttagataattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattggacctgggaaggtttaaaaatgga 18016  T
Q  121 ttttt 125  Q
    |||||    
T  18017 ttttt 18021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 18163 - 18196
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcg 215  Q
    ||||||||||||||||||||||| ||||||||||    
T  18163 aatgccttgtttaggttaaatgcaatctttgtcg 18196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 29025 - 28924
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| ||| || ||||||||| |||| ||| ||||||||||| ||||||| ||||||||||| |||| | |||||||||||||    
T  29025 gatttcgtgattttgacttttgagtagatccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 28926  T
Q  102 gg 103  Q
    ||    
T  28925 gg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 1345 - 1460
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    |||||||| | ||||||||| | ||||| |||| |||||||||||||||||| |||| |||||  ||| || || ||||||||||||||||  | |||||    
T  1345 ttttgaccctaaagttgaacttcagatgattttgagtgcctgaacatgtatattaatgattagacaagtttttagattgagattgaacctgagaaagttt 1444  T
Q  112 aagaatgaatttttgg 127  Q
    || |||| ||||||||    
T  1445 aaaaatggatttttgg 1460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 349
Target Start/End: Original strand, 22509 - 22656
Alignment:
Q  198 taaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaattgt 297  Q
    ||||||||||||||||||||| | ||||||  |||||||||| |||||||||||||||||| ||| ||||| ||||  |||| ||||||| || |  ||     
T  22509 taaatgcgatctttgtcgcacgagttgatgtgagttgatcttagaggttagaaactaagttgtttgtcttgatgttgctgttccagtaagactga--tgc 22606  T
Q  298 ataatctaatattgttgcgaatgttatataattgtatatacattacatgaat 349  Q
    |||   | || |||||   |||||||||||||||||||||||||||||||||    
T  22607 ata--ttgatgttgtttataatgttatataattgtatatacattacatgaat 22656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 79964 - 80067
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||||| ||| |||   || ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||    
T  79964 gatttcgtgattttgacttttgagttgaacattaaatgccattgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 80063  T
Q  102 ggaa 105  Q
    ||||    
T  80064 ggaa 80067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 80152 - 80188
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    ||||||||||||||||||||||||||||| |||||||    
T  80152 aatgccttgtttaggttaaatgcgatcttcgtcgcac 80188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 2430 - 2326
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| ||||||| ||| ||||||||||||||||  ||| ||||||||||| ||| ||||||| |||||||| || ||||   |||||||||||||    
T  2430 gatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacct 2331  T
Q  102 ggaat 106  Q
    |||||    
T  2330 ggaat 2326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 7088 - 6984
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| || ||||||| ||| ||||||||||||||||  ||| ||||||||||| ||| |||||||||||||||| || ||||   |||||||||||||    
T  7088 gatttcatatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacct 6989  T
Q  102 ggaat 106  Q
    |||||    
T  6988 ggaat 6984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 18590 - 18693
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||| || ||| ||||||||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  18590 gattttgtgattttgacttttgagatgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 18689  T
Q  102 ggaa 105  Q
    ||||    
T  18690 ggaa 18693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 12441 - 12544
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| || |||||||||||||  ||| ||||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||    
T  12441 gatttcgtgattttgacttttgagatgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 12540  T
Q  102 ggaa 105  Q
    ||||    
T  12541 ggaa 12544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 10633 - 10550
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgta 85  Q
    |||||||| |||||||||||| |||||| ||||||||| |||| ||||| ||||||||| ||||||| ||||||||||| ||||    
T  10633 gatttcgtgattttgacctttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgta 10550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 8165 - 8267
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| |||| |||| |||| ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||||||    
T  8165 gatttcgtgattttgacttttgagttgatcctt-gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 8263  T
Q  102 ggaa 105  Q
    ||||    
T  8264 ggaa 8267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 23934 - 24037
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||  |||| ||||||||||||||| ||||||| ||||||||| | ||||   |||||||||||||    
T  23934 gatttcgtgattttgacttttgagttgatccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacct 24033  T
Q  102 ggaa 105  Q
    ||||    
T  24034 ggaa 24037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 39563 - 39666
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||||||| ||| |||||| ||||||||| |||| ||| ||||||||||| || |||| ||||||||||| |||| | |||||||||||||    
T  39563 gatttcatgattttgacttttgagttgatccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacct 39662  T
Q  102 ggaa 105  Q
    ||||    
T  39663 ggaa 39666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 40345 - 40242
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| || |||||| |||| ||||||||||||||| ||||||| ||||||||||| || |   |||||||||||||    
T  40345 gatttcgtgattttgacttttgagttgatccgtagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacct 40246  T
Q  102 ggaa 105  Q
    ||||    
T  40245 ggaa 40242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 59179 - 59235
Alignment:
Q  46 agtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||||||||||||| ||||||| ||||||| ||| |||| | ||||||||||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctg 59235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 7209 - 7095
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagttt 111  Q
    |||||| | ||||||||||  ||||||| |||| |||| ||||| |||||||||||| |||||| ||| || || ||||||||||||||||| | |||||    
T  7209 ttttgaaccttaagttgaattttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagttt 7110  T
Q  112 aagaatgaatttttg 126  Q
    || |||| |||||||    
T  7109 aaaaatggatttttg 7095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 23370 - 23288
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgta 85  Q
    |||||||||||||||| ||| |||||| |||||||||  ||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  23370 atttcgtaattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgta 23288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 25640 - 25546
Alignment:
Q  33 ttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaatttttgg 127  Q
    ||||||| |||| |||||||||| |||||||||||| |||||| ||| || || ||||||||||||| ||||| ||||||| |||| ||||||||    
T  25640 ttagatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaacttggaaaagtttaaaaatggatttttgg 25546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 40400 - 40240
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||||||||||| || |||| |||||||| || ||||   |||||||||||||    
T  40400 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacct 40301  T
Q  102 ggaatagtttaagaatgaatttttggtagttgaacctgaactcgccatagcgagtagaggct 163  Q
    |  | | ||  |||||||| |||||| | |   ||||||||||||||  |||||||||||||    
T  40300 gacaga-ttgtagaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggct 40240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 347
Target Start/End: Original strand, 19713 - 19868
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || |||||||||||   |||||   |||||||||||| ||| ||||||||||||  ||||||| ||||| ||||| |||||||| |     
T  19713 ttaggttaaatgtgacctttgtcgcacgggttgatatgagttgatcttgggggtaagaaactaagttgcttatcttactgttgttgttccagtaagcatg 19812  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacatga 347  Q
    |||| ||| || | || || ||   ||||| |||||| ||||||| ||||||||||    
T  19813 aattatatgatttgatgttattaataatgtgatataaatgtatatgcattacatga 19868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 645 - 741
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaa 98  Q
    ||||| || |||||||||||  |||||| ||||| ||| |||| ||||||||||||||| ||||||| ||||||||||| |||| | ||||||||||    
T  645 gattttgtgattttgaccttcgagttgatccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaa 741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 10904 - 10972
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataatta 70  Q
    ||||||||| ||||||| ||| |||||||||||||||| |||| ||||||||||||||| |||||||||    
T  10904 gatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatta 10972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 13689 - 13585
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||| ||| |||| |||||||||| |||| ||||||| ||||||||||| ||||   ||||| |||||||    
T  13689 gatttcgtgattttgacttttgagttgatccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacct 13590  T
Q  102 ggaat 106  Q
    |||||    
T  13589 ggaat 13585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 47464 - 47360
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| | ||||| ||| |||||||||||||||| |||| |||| ||||| |||| ||||||| |||||||| || ||||   |||||||||||||    
T  47464 gatttcgtattgttgacttttgagttgaaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacct 47365  T
Q  102 ggaat 106  Q
    |||||    
T  47364 ggaat 47360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 1382 - 1288
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaat 106  Q
    ||||||| ||| ||||||||||||||||  ||| |||||||||||||   ||||||| ||||||||||| ||||   ||||||||||||||||||    
T  1382 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaat 1288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26888 - 26834
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  26888 tgatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 26834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36023 - 36077
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  36023 tgatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 36077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36945 - 36891
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  36945 tgatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 36891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 29231 - 29149
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctgg 103  Q
    ||||||||||||||||||| |||| |||||||||| || ||||||||| |||||| ||| || || |||||||||| ||||||    
T  29231 ttaagttgaaccttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattgagattggacctgg 29149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 26889 - 26855
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgc 216  Q
    |||||||||||||||||||||| ||||||||||||    
T  26889 aatgccttgtttaggttaaatgtgatctttgtcgc 26855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 2342 - 2245
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||| |||| | || ||| ||| ||||||||||||||||| |||||||||| ||| | | |||| |||||||||||||||| | |||||||||||    
T  2342 gatttcggaattataactttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9069 - 9122
Alignment:
Q  1 tgatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctga 54  Q
    ||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  9069 tgatttcgtagatttgacctttaagttgaaccttagatgtttttgagtgcctga 9122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 6460 - 6557
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    |||||| | |||||||| ||| || ||| |||||||||  ||| ||||||||||||||| ||||||| ||||||||||| |||| | |||||||||||    
T  6460 gatttcatgattttgacttttgagatgatccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

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Target: scaffold0139 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 38843 - 38751
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaa 113  Q
    |||||| |||||||||||| || | ||||| |||| |||||||||||| |||||| ||| || || ||||||||||||||||| | |||||||    
T  38843 ttaagtcgaaccttagatgattctgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaa 38751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 38607 - 38507
Alignment:
Q  195 ggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcctaaat 294  Q
    ||||||||| || |||| |||||| | ||||||  ||||||||  || ||| ||||||||||||  ||||||| ||||| |||||||||||||||| |||    
T  38607 ggttaaatgagacctttatcgcacgagttgatgtgagttgatcacgggggtaagaaactaagttgcttatcttactgttgttgtttcagtaagcctgaat 38508  T
Q  295 t 295  Q
    |    
T  38507 t 38507  T

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Target: scaffold0139; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 20469 - 20418
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctg 53  Q
    ||||| ||| ||||||| ||| ||||||||||||||||||||| ||||||||    
T  20469 gattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctg 20418  T

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Target: scaffold0070 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 5012 - 4912
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| | ||| || ||| |||||||||||||||| |||| ||||||| ||||||| || |||| | |||| ||||||||| | |||||||||||||    
T  5012 gatttcgtgactttaacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacct 4913  T
Q  102 g 102  Q
    |    
T  4912 g 4912  T

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Target: scaffold0639 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 8964 - 8865
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||| |||||| ||||||||| |||| |||||||||| |||| ||||| | ||||||||||| ||||   |||||||||||||    
T  8964 gattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacct 8865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 516 - 414
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| | ||||||||||||||  || | |||||||||||||| ||||| | ||||||||||| ||||   |||||||||||||    
T  516 gatttcgtgattttgacttttgaattgaaccttagatgccttga-gtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacct 418  T
Q  102 ggaa 105  Q
    ||||    
T  417 ggaa 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 329 - 293
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||||||||||||||||||    
T  329 aatgccttgtttaggttaaatgcgatctttgtcgcac 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 10399 - 10296
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||| || |||||||| ||| ||||||||||||||||  ||| ||||||| ||||||| || || | ||||||||||| ||||   |||||||||||||    
T  10399 gattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacct 10300  T
Q  102 ggaa 105  Q
    ||||    
T  10299 ggaa 10296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 10211 - 10178
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcg 215  Q
    ||||||||||||||||||||||||||||||||||    
T  10211 aatgccttgtttaggttaaatgcgatctttgtcg 10178  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 339583 - 339686
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||||| |||||||| ||| |||||| ||||| ||| |||| ||||||||||  ||| ||||||| |||||||| || ||||   |||||||||||||    
T  339583 gatttcgtgattttgacttttgagttgatccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacct 339682  T
Q  102 ggaa 105  Q
    ||||    
T  339683 ggaa 339686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 35512 - 35594
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagat 94  Q
    ||||| || ||||||||||||||| ||| |||| |||||||||| |||||||||||| |||||| ||| || || ||||||||    
T  35512 ttttgtcccttaagttgaaccttaaatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagat 35594  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 332862 - 332784
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaac 99  Q
    ||||||||| | ||||||| |||| |||||||||| |||||||| ||| |||||||||| || || |||||||||||||    
T  332862 ttaagttgagctttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaac 332784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 70272 - 70221
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtata 63  Q
    ||||||| ||| ||||||||||||||||||||| |||||||||| |||||||    
T  70272 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtata 70221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 279
Target Start/End: Complemental strand, 11591 - 11494
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtt 279  Q
    |||||| | |||||||| ||||||||||||||||  | | ||||||  |||| ||||| |||||||||||||||||| |||| |||| ||||| ||||    
T  11591 aatgccctttttaggttgaatgcgatctttgtcgttcgagttgatgtgagttaatcttagaggttagaaactaagttgtttaccttggtgttaatgtt 11494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Complemental strand, 2161 - 2131
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  2161 aatgttatataattgtatatacattacatga 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 1095 - 992
Alignment:
Q  22 taagttgaaccttagatg-tttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||||||| ||||||| ||||| ||||||||||  ||||||||||| |||||| ||  || || ||||||||||||||||| | ||||||| |||| |    
T  1095 taagttgaactttagatgatttttgagtgcctgaatgtgtataataatgattaggcaatttt-tagattgagattgaacctgggaaagtttaaaaatgga 997  T
Q  121 ttttt 125  Q
    |||||    
T  996 ttttt 992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 841 - 739
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||||||| || ||||||||||| | ||||||  |||||||| |   ||| |||||||||||| |||||||  ||||| ||||||||||||||||     
T  841 ttaggttaaatgagacctttgtcgcacgagttgatgtgagttgatcatat-ggtaagaaactaagttgtttatctaactgttgttgtttcagtaagcctg 743  T
Q  292 aatt 295  Q
    ||||    
T  742 aatt 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 52057 - 51953
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||||| |||| || ||| |||| |||||| ||||  ||| |||||||||||| || ||||||| ||||||||||| ||||    ||||||||||||    
T  52057 gatttcgtattttttacttttgagttaaacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacct 51958  T
Q  102 ggaat 106  Q
    |||||    
T  51957 ggaat 51953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 9466 - 9569
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    |||||| | |||| ||| ||| ||||||||||||||||  ||| ||||||||||||||| ||||| | |||| |||||| ||||   |||||||||| ||    
T  9466 gatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatct 9565  T
Q  102 ggaa 105  Q
    ||||    
T  9566 ggaa 9569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 9654 - 9690
Alignment:
Q  182 aatgccttgtttaggttaaatgcgatctttgtcgcac 218  Q
    |||||||||||||||||||||| ||||||||||||||    
T  9654 aatgccttgtttaggttaaatgtgatctttgtcgcac 9690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 1372 - 1478
Alignment:
Q  21 ttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctggaatagtttaagaatgaa 120  Q
    |||||| |||| ||||||| || | ||||||||||||||||||||||| | |||| ||| || || || ||||||||||||   | ||||||| |||| |    
T  1372 ttaagtcgaactttagatgattctgagtgcctgaacatgtataataatgagtaggcaagtttttagatggagattgaacctcagaaagtttaaaaatgga 1471  T
Q  121 tttttgg 127  Q
    |||||||    
T  1472 tttttgg 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 345
Target Start/End: Original strand, 1626 - 1779
Alignment:
Q  192 ttaggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagccta 291  Q
    |||||||| ||| || ||||||||||| | ||||||  |||||||||||  ||| ||||||||||||   |||||| || || ||||| ||||||||||     
T  1626 ttaggttacatgtgacctttgtcgcacgagttgatgtgagttgatcttgagggtaagaaactaagttgcctatcttactattgttgttccagtaagcctg 1725  T
Q  292 aattgtataatctaatattgttgcgaatgttatataattgtatatacattacat 345  Q
    |||| ||| || | |  |||||   ||||| |||||| ||||||| ||||||||    
T  1726 aattatatgatttgacgttgttaataatgtgatataaatgtatatgcattacat 1779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 1718 - 1767
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||| ||||||||||||||| |||||||||||||||| |||| |||||||    
T  1718 attttgtaattttgacctttgagttgaaccttagatgcttttgagtgcct 1767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 97297 - 97201
Alignment:
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 290  Q
    |||| |||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  || |||| ||||| ||||||||||||||||    
T  97297 taggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttttcttactgttgttgtttcagtaagcct 97201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 106575 - 106479
Alignment:
Q  193 taggttaaatgcgatctttgtcgcacaatttgatgctagttgatcttggaggttagaaactaagttatttatcttgctgttattgtttcagtaagcct 290  Q
    |||| |||||| || ||||||||||| | ||||||  |||||||| ||| ||| ||||||||||||  || |||| ||||| ||||||||||||||||    
T  106575 taggataaatgtgacctttgtcgcacgagttgatgtgagttgatcatgg-ggtaagaaactaagttgcttttcttactgttgttgtttcagtaagcct 106479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 5951 - 5995
Alignment:
Q  11 attttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||    
T  5951 attttgacctgtgagttgaaccttagatgtttttgagtgcctgaa 5995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 1764 - 1700
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataata 66  Q
    ||||||||| ||||||| ||||| |||||| ||||||| ||||  |||||||||||||| |||||    
T  1764 gatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaata 1700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 7741 - 7677
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataata 66  Q
    ||||||||| ||||||| ||||| |||||| ||||||| ||||  |||||||||||||| |||||    
T  7741 gatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaata 7677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 891 - 934
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  891 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 21449 - 21492
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  21449 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 21492  T

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Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 29341 - 29384
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||    
T  29341 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 29384  T

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Target: scaffold0101 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 8600 - 8643
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||    
T  8600 ttttgacctttgagttgaaccttagatgtttttgagtccctgaa 8643  T

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Target: scaffold0268 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 577 - 667
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacctg 102  Q
    ||||| || ||||||||| ||||| ||| |||| ||||| |||| |||||||||||| |||||| ||| || || || ||||||| |||||    
T  577 ttttgtcccttaagttgatccttaaatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagatggagattggacctg 667  T

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Target: scaffold0184 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 347
Target Start/End: Original strand, 1026 - 1056
Alignment:
Q  317 aatgttatataattgtatatacattacatga 347  Q
    |||||||||||||||||||||||||||||||    
T  1026 aatgttatataattgtatatacattacatga 1056  T

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Target: scaffold0084 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 10647 - 10569
Alignment:
Q  2 gatttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaaga 80  Q
    |||||||| |||||||| ||| |||||| ||||||||| |||| ||||||| ||||||  || || | |||||||||||    
T  10647 gatttcgtgattttgacttttgagttgatccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaaga 10569  T

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Target: scaffold1439 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 393
Target Start/End: Complemental strand, 139 - 106
Alignment:
Q  360 tgcataagtcggtctaacttgattaagatgatga 393  Q
    ||||||||||||||||| ||||||||||||||||    
T  139 tgcataagtcggtctaagttgattaagatgatga 106  T

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Target: scaffold0124 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 24293 - 24382
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataattattaggaaagattgtaaattgagattgaacct 101  Q
    ||||||| ||| |||| |||||||||||   || ||||||||||||||| ||||| | ||||||||||| | ||   |||||||||||||    
T  24293 ttttgacttttgagtttaaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacct 24382  T

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Target: scaffold0104 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 2300 - 2247
Alignment:
Q  14 ttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataa 67  Q
    ||||| ||| |||||||||||||||| |||||||||||| || |||| ||||||    
T  2300 ttgacttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataa 2247  T

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Target: scaffold0104; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 9982 - 9929
Alignment:
Q  14 ttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataa 67  Q
    ||||| ||| |||||||||||||||| |||||||||||| || |||| ||||||    
T  9982 ttgacttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataa 9929  T

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Target: scaffold0079 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 44535 - 44486
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||| ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  44535 attttgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 44486  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 18721 - 18676
Alignment:
Q  7 cgtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    |||| ||||||| ||| ||||||||||||||||||||| |||||||    
T  18721 cgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 18676  T

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Target: scaffold1124 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 2352 - 2312
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| |||||||||||||||| |||| |||||||    
T  2352 ttttgacctttgagttgaaccttagatgcttttgagtgcct 2312  T

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Target: scaffold0393 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 1970 - 1926
Alignment:
Q  8 gtaattttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||||||| ||| |||||||||||||||| |||| |||||||    
T  1970 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 1926  T

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Target: scaffold0324 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 15877 - 15837
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  15877 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15837  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 6721 - 6761
Alignment:
Q  12 ttttgacctttaagttgaaccttagatgtttttaagtgcct 52  Q
    ||||||| ||| ||||||||||||||||||||| |||||||    
T  6721 ttttgacttttgagttgaaccttagatgtttttgagtgcct 6761  T

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Target: scaffold0171 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 35155 - 35219
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaacatgtataataa 67  Q
    |||| ||||||||||| ||| |||||||||||||||| |||| ||| |||  | |||||||||||    
T  35155 attttgtaattttgacttttgagttgaaccttagatgcttttgagtacctttagatgtataataa 35219  T

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Target: scaffold0111 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 32919 - 32867
Alignment:
Q  3 atttcgtaattttgacctttaagttgaaccttagatgtttttaagtgcctgaa 55  Q
    |||| ||| |||||| | || ||||||||||||||||||||| ||||||||||    
T  32919 attttgtacttttgatcgttgagttgaaccttagatgtttttgagtgcctgaa 32867  T

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