View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5594_high_9 (Length: 273)
Name: NF5594_high_9
Description: NF5594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5594_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 14029410 - 14029164
Alignment:
| Q |
11 |
caaaggtcatgagttatttggcttgattccaactctatcaatgtaacggtcttaaaatatcttttttgacaaaaaatacataagaacttttttgttgaga |
110 |
Q |
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| T |
14029410 |
caaaggtcatgagttatttggcttgattccaactctatcaatgtaacggtcttaaaatatcttttttgacaaaaaatacataagaatttttttgatgaga |
14029311 |
T |
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| Q |
111 |
aatacgtaagagtatcttttttgacaaaaaatacgtaagaacgtctattaacnnnnnnnttatcatttttaagtaattattaggactattaaaaaggatt |
210 |
Q |
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| T |
14029310 |
aatacgtaagagtatcttttttgacaaaaaatatgtaagaacgtctgttaacaaaaaaattatcatttttaagtaattattaggactattaaaaaggatt |
14029211 |
T |
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| Q |
211 |
tcttaagctattgatacataactttccaagtaattaggaccacattc |
257 |
Q |
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| T |
14029210 |
tcttaagctattgatacataactttccaagtaattatgaccacattc |
14029164 |
T |
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