View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5595_high_55 (Length: 218)

Name: NF5595_high_55
Description: NF5595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5595_high_55
NF5595_high_55
[»] scaffold0193 (1 HSPs)
scaffold0193 (5-209)||(19544-19748)
[»] scaffold0228 (3 HSPs)
scaffold0228 (3-209)||(6308-6515)
scaffold0228 (3-209)||(13890-14097)
scaffold0228 (3-209)||(23842-24049)
[»] chr6 (33 HSPs)
chr6 (23-209)||(10975537-10975725)
chr6 (16-164)||(16896725-16896874)
chr6 (15-164)||(18558075-18558224)
chr6 (8-164)||(14672181-14672337)
chr6 (23-209)||(5484123-5484310)
chr6 (14-175)||(14355700-14355862)
chr6 (16-190)||(14565893-14566069)
chr6 (29-186)||(14894455-14894608)
chr6 (13-164)||(15514639-15514788)
chr6 (23-144)||(18027839-18027960)
chr6 (16-164)||(13562484-13562631)
chr6 (9-161)||(9521647-9521797)
chr6 (23-168)||(19976601-19976746)
chr6 (11-164)||(19969030-19969181)
chr6 (41-190)||(19980855-19981005)
chr6 (123-177)||(18001947-18002001)
chr6 (85-162)||(23301224-23301302)
chr6 (123-164)||(18629026-18629067)
chr6 (123-168)||(25654898-25654943)
chr6 (125-177)||(13620259-13620311)
chr6 (85-164)||(23300236-23300316)
chr6 (125-177)||(31628961-31629013)
chr6 (123-186)||(18399706-18399769)
chr6 (123-177)||(18584079-18584133)
chr6 (123-177)||(23148737-23148791)
chr6 (123-177)||(25633156-25633210)
chr6 (123-177)||(32899564-32899618)
chr6 (123-177)||(35008894-35008948)
chr6 (123-164)||(13014142-13014183)
chr6 (14-143)||(13310606-13310733)
chr6 (123-164)||(19982733-19982774)
chr6 (123-164)||(35014596-35014637)
chr6 (13-57)||(15937227-15937271)
[»] chr3 (43 HSPs)
chr3 (14-209)||(11832275-11832471)
chr3 (15-209)||(12252083-12252278)
chr3 (8-209)||(11829097-11829299)
chr3 (16-148)||(25660887-25661020)
chr3 (16-148)||(25667292-25667425)
chr3 (16-148)||(25673697-25673830)
chr3 (16-148)||(25680122-25680255)
chr3 (16-148)||(25688426-25688559)
chr3 (16-163)||(12695503-12695649)
chr3 (16-161)||(19659149-19659295)
chr3 (23-145)||(19631302-19631424)
chr3 (14-194)||(20421542-20421722)
chr3 (14-146)||(30104252-30104384)
chr3 (16-126)||(5348105-5348215)
chr3 (26-143)||(4657392-4657509)
chr3 (103-194)||(15044637-15044729)
chr3 (56-190)||(27053063-27053198)
chr3 (14-175)||(7769997-7770157)
chr3 (16-164)||(19431651-19431798)
chr3 (23-164)||(10935154-10935295)
chr3 (35-175)||(17580658-17580799)
chr3 (102-164)||(16218348-16218410)
chr3 (78-190)||(13440774-13440887)
chr3 (123-177)||(7854723-7854777)
chr3 (85-162)||(11677195-11677273)
chr3 (123-177)||(19232530-19232584)
chr3 (125-186)||(45582365-45582426)
chr3 (123-177)||(2050555-2050609)
chr3 (123-177)||(3993312-3993366)
chr3 (123-177)||(12348731-12348785)
chr3 (44-205)||(12391322-12391483)
chr3 (123-177)||(14304818-14304872)
chr3 (123-177)||(51960569-51960623)
chr3 (123-181)||(55513629-55513686)
chr3 (124-177)||(5240168-5240221)
chr3 (123-164)||(6146196-6146237)
chr3 (102-190)||(10726734-10726823)
chr3 (123-164)||(11328403-11328444)
chr3 (123-164)||(16181369-16181410)
chr3 (123-164)||(17955443-17955484)
chr3 (128-177)||(19260295-19260344)
chr3 (123-164)||(22143758-22143799)
chr3 (125-177)||(316932-316984)
[»] chr1 (27 HSPs)
chr1 (14-209)||(21423908-21424104)
chr1 (16-164)||(23475187-23475334)
chr1 (15-209)||(21981445-21981640)
chr1 (31-175)||(18621240-18621384)
chr1 (16-199)||(20408636-20408822)
chr1 (8-209)||(21979227-21979429)
chr1 (16-164)||(21720928-21721077)
chr1 (78-194)||(24243638-24243755)
chr1 (11-160)||(19507640-19507781)
chr1 (31-162)||(21218655-21218786)
chr1 (31-142)||(22615817-22615928)
chr1 (97-164)||(13222103-13222171)
chr1 (123-177)||(20532185-20532239)
chr1 (3-76)||(49996615-49996687)
chr1 (104-175)||(21403088-21403159)
chr1 (123-177)||(20446421-20446475)
chr1 (123-161)||(20887268-20887306)
chr1 (123-177)||(20932080-20932134)
chr1 (23-57)||(21403182-21403216)
chr1 (123-177)||(41212791-41212845)
chr1 (123-164)||(9783511-9783552)
chr1 (123-164)||(13103907-13103948)
chr1 (87-162)||(17864680-17864756)
chr1 (123-184)||(21718997-21719058)
chr1 (123-164)||(36355708-36355749)
chr1 (125-177)||(49968414-49968466)
chr1 (123-163)||(49996724-49996764)
[»] chr2 (48 HSPs)
chr2 (3-207)||(18995882-18996087)
chr2 (16-194)||(28774889-28775067)
chr2 (16-186)||(20510977-20511147)
chr2 (26-164)||(24282302-24282438)
chr2 (43-164)||(19901698-19901819)
chr2 (14-164)||(34133556-34133705)
chr2 (41-164)||(27354212-27354337)
chr2 (23-144)||(19285280-19285400)
chr2 (16-164)||(34896088-34896236)
chr2 (5-162)||(21654893-21655051)
chr2 (23-164)||(21909424-21909565)
chr2 (15-95)||(45572795-45572874)
chr2 (15-95)||(45576462-45576541)
chr2 (15-95)||(45580129-45580208)
chr2 (15-95)||(45583796-45583875)
chr2 (15-95)||(45587463-45587542)
chr2 (15-95)||(45591130-45591209)
chr2 (15-95)||(45594797-45594876)
chr2 (15-95)||(45598464-45598543)
chr2 (15-95)||(45602131-45602210)
chr2 (15-95)||(45605798-45605877)
chr2 (15-95)||(45609465-45609544)
chr2 (15-95)||(45613132-45613211)
chr2 (15-95)||(45616799-45616878)
chr2 (123-186)||(25875357-25875420)
chr2 (123-177)||(9652343-9652397)
chr2 (123-177)||(25264881-25264935)
chr2 (123-177)||(43642420-43642474)
chr2 (123-164)||(16446515-16446556)
chr2 (83-144)||(34877873-34877934)
chr2 (8-51)||(19110464-19110507)
chr2 (16-59)||(24699273-24699316)
chr2 (123-177)||(463462-463516)
chr2 (123-177)||(20626790-20626844)
chr2 (123-177)||(25602803-25602857)
chr2 (123-177)||(32466623-32466676)
chr2 (123-177)||(36981919-36981973)
chr2 (123-177)||(42535379-42535433)
chr2 (123-164)||(723155-723196)
chr2 (86-177)||(23163911-23164004)
chr2 (86-177)||(23575168-23575261)
chr2 (123-164)||(23821223-23821264)
chr2 (123-164)||(23830302-23830343)
chr2 (123-164)||(24293951-24293992)
chr2 (75-144)||(29744103-29744172)
chr2 (16-57)||(39665235-39665276)
chr2 (123-163)||(19794169-19794209)
chr2 (123-163)||(24086871-24086911)
[»] chr5 (21 HSPs)
chr5 (11-195)||(24516666-24516849)
chr5 (26-175)||(17170245-17170395)
chr5 (26-161)||(19315715-19315850)
chr5 (14-134)||(22446744-22446864)
chr5 (14-209)||(31480180-31480373)
chr5 (15-143)||(18223374-18223502)
chr5 (23-174)||(22826943-22827089)
chr5 (16-199)||(10176023-10176206)
chr5 (16-118)||(19858752-19858854)
chr5 (123-177)||(27182015-27182069)
chr5 (111-164)||(20726426-20726479)
chr5 (123-164)||(7729210-7729251)
chr5 (85-145)||(20728422-20728482)
chr5 (123-186)||(19406303-19406366)
chr5 (123-186)||(24182555-24182618)
chr5 (126-164)||(16596261-16596299)
chr5 (123-177)||(23515300-23515354)
chr5 (78-189)||(24194877-24194990)
chr5 (14-67)||(26260406-26260459)
chr5 (123-164)||(32951442-32951482)
chr5 (123-164)||(37984134-37984175)
[»] scaffold0964 (1 HSPs)
scaffold0964 (23-194)||(2821-2993)
[»] scaffold0018 (2 HSPs)
scaffold0018 (16-190)||(61754-61929)
scaffold0018 (123-177)||(50653-50707)
[»] chr7 (29 HSPs)
chr7 (16-162)||(11773292-11773439)
chr7 (24-175)||(18083187-18083338)
chr7 (16-164)||(13761027-13761175)
chr7 (16-150)||(3169561-3169695)
chr7 (64-144)||(8323317-8323397)
chr7 (28-144)||(18363106-18363222)
chr7 (123-164)||(34240642-34240683)
chr7 (16-59)||(16197719-16197762)
chr7 (85-164)||(6459444-6459524)
chr7 (64-175)||(8326515-8326628)
chr7 (14-95)||(12193159-12193239)
chr7 (16-121)||(29740554-29740658)
chr7 (123-164)||(31501934-31501975)
chr7 (123-164)||(44866003-44866044)
chr7 (87-175)||(13451911-13451998)
chr7 (124-164)||(17816899-17816939)
chr7 (124-164)||(19050062-19050102)
chr7 (123-162)||(127191-127230)
chr7 (12-55)||(15308083-15308126)
chr7 (123-177)||(3060691-3060745)
chr7 (123-164)||(13146570-13146612)
chr7 (123-164)||(14419657-14419698)
chr7 (123-164)||(26069036-26069077)
chr7 (123-164)||(26069694-26069735)
chr7 (123-164)||(26093481-26093522)
chr7 (123-164)||(38424853-38424894)
chr7 (123-164)||(45451597-45451638)
chr7 (124-164)||(12369262-12369302)
chr7 (123-175)||(16197642-16197694)
[»] scaffold0014 (1 HSPs)
scaffold0014 (16-164)||(202207-202354)
[»] scaffold0111 (2 HSPs)
scaffold0111 (8-143)||(25245-25380)
scaffold0111 (85-181)||(29301-29398)
[»] chr8 (16 HSPs)
chr8 (8-162)||(18829977-18830131)
chr8 (14-175)||(24625538-24625699)
chr8 (14-161)||(20496156-20496303)
chr8 (27-162)||(25281742-25281877)
chr8 (23-208)||(23543072-23543256)
chr8 (8-145)||(15887004-15887141)
chr8 (16-144)||(16090628-16090756)
chr8 (16-164)||(14392974-14393120)
chr8 (16-144)||(23539662-23539790)
chr8 (23-162)||(18829174-18829314)
chr8 (127-209)||(20496295-20496378)
chr8 (123-177)||(20653452-20653506)
chr8 (123-177)||(24716301-24716355)
chr8 (123-177)||(29760712-29760766)
chr8 (123-164)||(23151263-23151304)
chr8 (123-168)||(23225584-23225629)
[»] scaffold0039 (1 HSPs)
scaffold0039 (23-162)||(8552-8691)
[»] scaffold0050 (1 HSPs)
scaffold0050 (16-174)||(77915-78073)
[»] scaffold0007 (1 HSPs)
scaffold0007 (16-175)||(204099-204259)
[»] chr4 (27 HSPs)
chr4 (14-175)||(9567234-9567399)
chr4 (14-193)||(28801453-28801632)
chr4 (16-160)||(21982646-21982790)
chr4 (16-163)||(11776908-11777045)
chr4 (27-158)||(16571852-16571984)
chr4 (23-144)||(12333982-12334102)
chr4 (89-209)||(17867677-17867798)
chr4 (16-95)||(9652749-9652826)
chr4 (16-190)||(15712076-15712253)
chr4 (8-144)||(6188903-6189039)
chr4 (123-186)||(21958891-21958954)
chr4 (123-177)||(53704174-53704228)
chr4 (8-144)||(12343406-12343539)
chr4 (123-164)||(25118624-25118665)
chr4 (124-177)||(44347595-44347648)
chr4 (123-164)||(54117708-54117749)
chr4 (33-138)||(6942864-6942971)
chr4 (125-164)||(122647-122686)
chr4 (123-186)||(13722517-13722580)
chr4 (123-186)||(45458285-45458348)
chr4 (123-177)||(44056689-44056743)
chr4 (123-164)||(15012730-15012771)
chr4 (123-164)||(15045595-15045636)
chr4 (123-164)||(15108788-15108829)
chr4 (124-177)||(16732945-16732998)
chr4 (123-164)||(41255814-41255855)
chr4 (125-177)||(34396031-34396083)
[»] scaffold0412 (1 HSPs)
scaffold0412 (26-209)||(3858-4042)
[»] scaffold0004 (2 HSPs)
scaffold0004 (16-145)||(370694-370822)
scaffold0004 (123-177)||(192937-192991)
[»] scaffold0183 (2 HSPs)
scaffold0183 (46-194)||(20014-20164)
scaffold0183 (49-164)||(11755-11869)
[»] scaffold0186 (1 HSPs)
scaffold0186 (17-175)||(19737-19897)
[»] scaffold0035 (3 HSPs)
scaffold0035 (97-209)||(85655-85768)
scaffold0035 (87-209)||(27640-27763)
scaffold0035 (3-51)||(85573-85621)
[»] scaffold0196 (1 HSPs)
scaffold0196 (16-162)||(17705-17851)
[»] scaffold0112 (1 HSPs)
scaffold0112 (15-144)||(13915-14044)
[»] scaffold0331 (1 HSPs)
scaffold0331 (8-112)||(5165-5268)
[»] scaffold1539 (1 HSPs)
scaffold1539 (123-177)||(304-358)
[»] scaffold0772 (1 HSPs)
scaffold0772 (16-152)||(2112-2247)
[»] scaffold0020 (1 HSPs)
scaffold0020 (17-68)||(109097-109148)
[»] scaffold0001 (3 HSPs)
scaffold0001 (26-161)||(151238-151373)
scaffold0001 (123-177)||(70043-70097)
scaffold0001 (123-177)||(79308-79362)
[»] scaffold0672 (1 HSPs)
scaffold0672 (23-164)||(4876-5018)
[»] scaffold0162 (2 HSPs)
scaffold0162 (123-177)||(12479-12533)
scaffold0162 (123-163)||(25883-25923)
[»] scaffold0008 (2 HSPs)
scaffold0008 (123-177)||(127644-127698)
scaffold0008 (123-164)||(35696-35737)
[»] scaffold0447 (2 HSPs)
scaffold0447 (124-177)||(5329-5382)
scaffold0447 (124-177)||(9943-9996)
[»] scaffold0383 (1 HSPs)
scaffold0383 (124-177)||(7938-7991)
[»] scaffold0086 (1 HSPs)
scaffold0086 (85-145)||(9143-9203)
[»] scaffold0106 (1 HSPs)
scaffold0106 (124-164)||(48971-49011)
[»] scaffold1518 (1 HSPs)
scaffold1518 (54-149)||(870-965)
[»] scaffold0205 (1 HSPs)
scaffold0205 (11-78)||(8755-8822)
[»] scaffold0537 (1 HSPs)
scaffold0537 (123-177)||(668-722)
[»] scaffold0498 (1 HSPs)
scaffold0498 (123-177)||(9620-9674)
[»] scaffold0413 (1 HSPs)
scaffold0413 (123-177)||(5581-5635)
[»] scaffold0302 (1 HSPs)
scaffold0302 (123-177)||(12855-12909)
[»] scaffold0116 (1 HSPs)
scaffold0116 (123-177)||(30856-30910)
[»] scaffold0044 (1 HSPs)
scaffold0044 (123-177)||(39074-39128)
[»] scaffold0037 (1 HSPs)
scaffold0037 (123-177)||(97587-97641)
[»] scaffold0034 (2 HSPs)
scaffold0034 (123-177)||(41433-41487)
scaffold0034 (123-177)||(46940-46994)
[»] scaffold0011 (1 HSPs)
scaffold0011 (123-177)||(122630-122684)
[»] scaffold0634 (1 HSPs)
scaffold0634 (86-177)||(4517-4610)
[»] scaffold0387 (1 HSPs)
scaffold0387 (123-164)||(424-465)
[»] scaffold0338 (1 HSPs)
scaffold0338 (123-164)||(9773-9814)
[»] scaffold0310 (1 HSPs)
scaffold0310 (124-177)||(5842-5895)
[»] scaffold0175 (1 HSPs)
scaffold0175 (123-164)||(5480-5521)
[»] scaffold0160 (1 HSPs)
scaffold0160 (123-164)||(772-813)
[»] scaffold0151 (1 HSPs)
scaffold0151 (123-164)||(21831-21872)
[»] scaffold0132 (1 HSPs)
scaffold0132 (123-164)||(43123-43164)
[»] scaffold0120 (1 HSPs)
scaffold0120 (123-164)||(22285-22326)
[»] scaffold0078 (2 HSPs)
scaffold0078 (123-164)||(36543-36584)
scaffold0078 (123-175)||(42074-42126)
[»] scaffold0077 (1 HSPs)
scaffold0077 (123-164)||(36386-36427)
[»] scaffold0026 (1 HSPs)
scaffold0026 (123-164)||(89307-89348)
[»] scaffold0025 (1 HSPs)
scaffold0025 (123-164)||(86271-86312)
[»] scaffold0012 (1 HSPs)
scaffold0012 (123-164)||(246911-246952)
[»] scaffold0416 (1 HSPs)
scaffold0416 (123-175)||(6395-6447)
[»] scaffold0359 (1 HSPs)
scaffold0359 (124-164)||(2090-2130)
[»] scaffold0234 (1 HSPs)
scaffold0234 (125-177)||(16850-16902)
[»] scaffold0184 (1 HSPs)
scaffold0184 (123-175)||(30718-30770)
[»] scaffold0103 (1 HSPs)
scaffold0103 (123-187)||(34418-34482)
[»] scaffold0021 (1 HSPs)
scaffold0021 (125-177)||(131673-131725)


Alignment Details
Target: scaffold0193 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 19748 - 19544
Alignment:
Q  5 taccaacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttggga 104  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19748 taccaacctgattttccctagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcattcggga 19649  T
Q  105 ttagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaatagtcttttaattacgaga 204  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19648 ttagtggatttttgcttaagaaggatattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaatagtcttttgattacgaga 19549  T
Q  205 attat 209  Q
    |||||    
T  19548 attat 19544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 104; Significance: 5e-52; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 6308 - 6515
Alignment:
Q  3 tataccaacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgg 102  Q
    |||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| |||| || ||||| |||||||||||| ||| ||    
T  6308 tataacaacccgattttcgctagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattatttgtctctgtgtgtattttattcgg 6407  T
Q  103 gattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacg 201  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||  |||||||| || |||   |||| ||||| |||||||||||||  |||||    
T  6408 gattagtagattttggtttaagaagggtattttactcattttagactcaagggtatttttgtcatttcatgagaaagggtaaaatagtcttttggttacg 6507  T
Q  202 agaattat 209  Q
    ||||||||    
T  6508 agaattat 6515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 13890 - 14097
Alignment:
Q  3 tataccaacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgg 102  Q
    |||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| |||| || ||||| |||||||||||| ||| ||    
T  13890 tataacaacccgattttcgctagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattatttgtctctgtgtgtattttattcgg 13989  T
Q  103 gattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacg 201  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||  |||||||| || |||   |||| ||||| |||||||||||||  |||||    
T  13990 gattagtagattttggtttaagaagggtattttactcattttagactcaagggtatttttgtcatttcatgagaaagggtaaaatagtcttttggttacg 14089  T
Q  202 agaattat 209  Q
    ||||||||    
T  14090 agaattat 14097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 23842 - 24049
Alignment:
Q  3 tataccaacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgg 102  Q
    |||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| |||| || ||||| |||||||||||| ||| ||    
T  23842 tataacaacccgattttcgctagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattatttgtctctgtgtgtattttattcgg 23941  T
Q  103 gattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacg 201  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||  |||||||| || |||   |||| ||||| |||||||||||||  |||||    
T  23942 gattagtagattttggtttaagaagggtattttactcattttagactcaagggtatttttgtcatttcatgagaaagggtaaaatagtcttttggttacg 24041  T
Q  202 agaattat 209  Q
    ||||||||    
T  24042 agaattat 24049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 10975725 - 10975537
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgta-agtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctt 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||   ||| |||||  ||||||||||| ||||||||||||| |||||| ||||    
T  10975725 tagaattattttaattaattattatgtgtgtttatatatgcttgtacagcccatatttgtctatgtgtgtattttatttgggattagtggattttagctt 10975626  T
Q  122 aagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaattat 209  Q
    ||||||||||||||||||||||||||||||  || |||||||| ||| |||||| ||||| ||||| |||||||  ||| |||||||||    
T  10975625 aagaagggtattttagtcattttagactcaatggcattttggtcatttggtgagtaagggtaaaattgtcttttcgttaagagaattat 10975537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 16896874 - 16896725
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||  ||||||| |||||||||||| ||| |||||||||  ||||    
T  16896874 tttttgttagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgatgaattgtctctgtgtgtattttattcgggattagtgaattt 16896775  T
Q  116 tt-gcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    || |||||||||| |||||||||||||| ||||||||| |||||||||||    
T  16896774 ttggcttaagaagagtattttagtcattctagactcaggggtattttggt 16896725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 18558224 - 18558075
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||  || |||||  ||||||||||| ||||||||||| | ||||    
T  18558224 attttcgttagaattattttaattaattattatgtatgtttatatgtgcttgtatgtgtttatttgtctatgtgtgtattttatttgggattaatggatt 18558125  T
Q  115 tttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    || |||| |||||||||||||||| ||||||||| ||  |||||||||||    
T  18558124 ttggctttagaagggtattttagtaattttagacacatgggtattttggt 18558075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 14672337 - 14672181
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggatta 107  Q
    ||||| ||||||||||||| ||||||||||||||| |||| ||| ||||||| |||||||| |||| |||||| | ||||||||||||   |||||||||    
T  14672337 caacccgattttcgttagatttattttaattaatttttatatgtatttatatgtgcttgtatgtgattaattgcctctgtgtgtattttggttgggatta 14672238  T
Q  108 gtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||  | ||| |  | |||||| |||||||||||||||| |||||| |||||||||||    
T  14672237 gtgaaatttggtgttagaaggctattttagtcattttaaactcaggggtattttggt 14672181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 5484123 - 5484310
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    |||||||||| |||||| ||||||||  ||||||| | || ||||| |||| || ||||| |||||||| ||| ||| |||||||||  ||||| |||||    
T  5484123 tagaattattctaattatttattatgcatgtttatgtgtgtttgtatgtgattagttgtctctgtgtgtgttttattcgggattagtgaattttggctta 5484222  T
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaattat 209  Q
    |||||||||||||||||||||| ||||||  ||||||||| | |||   | || ||||| |||||||| ||||| |||||||||||||    
T  5484223 agaagggtattttagtcattttggactcaagggtattttgttcatttaataagaaagggtaaaatagtattttagttacgagaattat 5484310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 14355862 - 14355700
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||| || |||||||||||||| ||||||||||||||||||| |||||||  |||| | |||| | |||||||||||| ||| ||||||||| |||    
T  14355862 gattttcgctaaaattattttaattatttattatgtgtgtttatatgtgcttgtgtgtgattgattgcctctgtgtgtattttattcgggattagtggat 14355763  T
Q  114 ttttgcttaagaagggtattttagtcatt-ttagactcagaggtattttggttattaggtgag 175  Q
    |||||    |||||||||||||||||||| |||||  ||  ||||||||||| ||| ||||||    
T  14355762 ttttggcctagaagggtattttagtcattattagagccatgggtattttggtcatttggtgag 14355700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 14565893 - 14566069
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| |  || |  |||| ||||||||  ||||||||||| ||||||||||| |  ||||    
T  14565893 ttttcgttagatttattttaattatttattatgtgtgtttatatgtttttatgtgtgattaattgtctttgtgtgtattttatttgggattactgaattt 14565992  T
Q  116 ttgcttaagaagggtattttagtca-ttttagactcagaggtattttggttattaggtgag-aaggggaaaatagtc 190  Q
      ||||||||| ||||||||||||| |||||||||||  ||||||||| | ||| | |||| ||||| |||||||||    
T  14565993 cggcttaagaatggtattttagtcatttttagactcaagggtattttgatcatttgatgagtaagggtaaaatagtc 14566069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 14894608 - 14894455
Alignment:
Q  29 tattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagg 128  Q
    ||||||||||| ||||||||||||||||||| ||||||||  ||| || ||||| |  ||||||||| ||||||||| ||| |||||| |||    ||||    
T  14894608 tattttaattatttattatgtgtgtttatatgtgcttgtatatgattatttgtctcaatgtgtattttatttgggatcagtggattttggct----aagg 14894513  T
Q  129 gtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    ||| |||||||||||||||||||  ||||||||||| ||| |||||||| ||| ||||    
T  14894512 gtaatttagtcattttagactcaagggtattttggtcatttggtgagaaagggtaaat 14894455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 15514639 - 15514788
Alignment:
Q  13 tgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtaga 112  Q
    |||||||||||||| ||||||||||||||| |||  ||||||||||| |||||||| |||| |||||| | ||||||||||||   ||||||||||| ||    
T  15514639 tgattttcgttagatttattttaattaattttta--tgtgtttatatatgcttgtatgtgattaattgcctctgtgtgtattttggttgggattagtgga 15514736  T
Q  113 tttttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
     ||  |  | ||||||||||||||||||||||| ||| || |||||||||||    
T  15514737 attcggtgttagaagggtattttagtcattttaaacttaggggtattttggt 15514788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 18027839 - 18027960
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||  |||| || || || |||||||||||| ||||||||||||| |||||||| |      
T  18027839 tagaattattttaattatttattatgtgtgtttatatgtgcttgtgtgtgattatttatctctgtgtgtattttatttgggattagtggatttttggtct 18027938  T
Q  123 agaagggtattttagtcatttt 144  Q
    | ||| ||||||| ||||||||    
T  18027939 aaaagagtatttttgtcatttt 18027960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 13562484 - 13562631
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| || ||||||||||| || ||||||| |||||||||||  ||||||  |||| |||||||| ||||    |||| ||| || ||||||||||||    
T  13562484 ttttcgctaaaattattttaaatatttattatatgtgtttatattcgcttgtgtgtgattaattgtctctgtaa--attttattgggaattagtagattt 13562581  T
Q  116 ttgcttaagaagggtattttagtca-ttttagactcagaggtattttggt 164  Q
    | |||||||||||||  |||||||| |||||||||||| |||||||||||    
T  13562582 tggcttaagaagggtcatttagtcatttttagactcaggggtattttggt 13562631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 9521797 - 9521647
Alignment:
Q  9 aacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattag 108  Q
    |||||| |||||| ||||||||||||| | | |||| ||||||  ||||||  | ||||| |||| || |||||| ||||||||||| ||||||||||||    
T  9521797 aacctgtttttcgctagaattattttattaatttatcatgtgt--ttatatgagtttgtatgtgattatttgtcattgtgtgtattttatttgggattag 9521700  T
Q  109 tagatttttgcttaagaagggtattttagtcattttagactcagaggtatttt 161  Q
    | |||| ||||   |||| |||||||| ||||||||||||| || ||||||||    
T  9521699 tggattgttgccctagaaaggtattttggtcattttagactaaggggtatttt 9521647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 19976601 - 19976746
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||||| |  |||| || ||| |  ||||||||| | ||||||||||||| |||||||| | |    
T  19976601 tagaattattttagttatttattatatgtgtttatatgtgcttttgtgtgattatttgcctttgtgtgtatattatttgggattagtggatttttggtca 19976700  T
Q  123 agaagggtattttagtca-ttttagactcagaggtattttggttatt 168  Q
    ||||  ||| |||||||| |||||||||| || ||||||||||||||    
T  19976701 agaattgtaatttagtcacttttagactc-gatgtattttggttatt 19976746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 19969030 - 19969181
Alignment:
Q  11 cctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagta 110  Q
    |||| |||||| || |||||||||||||| |||  |||||||||| ||| ||||||||||||| |||||| |  ||| |||| || |||  ||||||||     
T  19969030 cctgtttttcgctataattattttaattattta--atgtgtgtttttatgtgcttgtaagtgattaattgcctttgtatgtaatttattcaggattagtg 19969127  T
Q  111 gatttttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
     |||||  | | |||||| ||||||||| |||||||||| |  |||||||||||    
T  19969128 cattttgacattagaaggctattttagttattttagacttaagggtattttggt 19969181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 190
Target Start/End: Complemental strand, 19981005 - 19980855
Alignment:
Q  41 ttattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtca 140  Q
    ||||||||||||||| ||| ||||| |  |||| ||||||    ||||||||||| ||| |||| |||| ||||||  ||| ||||||| ||||||||||    
T  19981005 ttattatgtgtgtttgtatatgcttatgtgtgattaattgcatatgtgtgtattttattcgggactagtggattttgacttgagaagggcattttagtca 19980906  T
Q  141 ttttagactcagaggtattttggttattaggtgag-aaggggaaaatagtc 190  Q
    ||||||| ||   ||||||||||  ||| |||||| ||||| |||||||||    
T  19980905 ttttagaatcgagggtattttggccattcggtgagcaagggtaaaatagtc 19980855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 18001947 - 18002001
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||||||||  | ||||||||||| ||| ||||||||    
T  18001947 agaagggtattttagtcattttagacttgggggtattttggtcatttggtgagaa 18002001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 23301302 - 23301224
Alignment:
Q  85 tgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcatttt-agactcagaggtattttg 162  Q
    ||||||||||| |||||||||| |||||||||||    |||| ||||||||||||||||| ||||| || |||||||||    
T  23301302 tgtgtgtattttatttgggatttgtagatttttgacctagaatggtattttagtcattttaagactaaggggtattttg 23301224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 18629026 - 18629067
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  18629026 agaagggtaatttagtcattttggactcagaggtattttggt 18629067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 25654943 - 25654898
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttatt 168  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  25654943 agaagggtaatttagtcattttggactcaggggtattttggttatt 25654898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 13620259 - 13620311
Alignment:
Q  125 aagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||| || ||||||||||| ||| || |||||    
T  13620259 aagggtattttagtcattttagacttaggggtattttggtaatttggagagaa 13620311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 23300316 - 23300236
Alignment:
Q  85 tgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcatttt-agactcagaggtattttggt 164  Q
    ||||||||||| |||||||||| || ||||||||    | |||||||||||||||||||| ||||| || |||||||||||    
T  23300316 tgtgtgtattttatttgggatttgtggatttttgacctataagggtattttagtcattttaagactaaggggtattttggt 23300236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 31629013 - 31628961
Alignment:
Q  125 aagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  31629013 aagggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 31628961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 18399769 - 18399706
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    |||||||||||||||||||||| |||| || |||||||| || |||  ||||||| ||||||||    
T  18399769 agaagggtattttagtcattttggacttaggggtatttttgtcattttgtgagaacgggaaaat 18399706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 18584133 - 18584079
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  18584133 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 18584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 23148791 - 23148737
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||| | || ||||||||||| |||  |||||||    
T  23148791 agaagggtattttagtcattttagatttaggggtattttggtcattttgtgagaa 23148737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 25633156 - 25633210
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  25633156 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 25633210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 32899618 - 32899564
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  32899618 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 32899564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 35008894 - 35008948
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| |  ||||||||||| |||  |||||||    
T  35008894 agaagggtattttagtcattttagacttaagggtattttggtcattttgtgagaa 35008948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 13014142 - 13014183
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  13014142 agaagggtattttagtcattttggacttaggggtattttggt 13014183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 143
Target Start/End: Complemental strand, 13310733 - 13310606
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||| |||| |||||||| ||| ||||||||||| ||||| | ||||| || || | ||||||||  ||||||||||| || | ||||| |||||     
T  13310733 gattttcgctagatttatttta-ttatttattatgtgtatttatgtgtgcttctatgtaattaattgtctttgtgtgtattttatct-ggattggtagag 13310636  T
Q  114 ttttgcttaagaagggtattttagtcattt 143  Q
    ||| ||||| | |||| ||||| |||||||    
T  13310635 tttggcttatggagggaattttggtcattt 13310606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 19982733 - 19982774
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||| |||||||||||  |||||||||||    
T  19982733 agaagggtattttagtcgttttagactcaagggtattttggt 19982774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 35014596 - 35014637
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  35014596 agaagggtattttagtcattttagacttatgggtattttggt 35014637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 15937227 - 15937271
Alignment:
Q  13 tgattttcgttagaattattttaattaattattatgtgtgtttat 57  Q
    ||||||||| |||||||||||||||||||| |||| |||| ||||    
T  15937227 tgattttcgctagaattattttaattaatttttatatgtgattat 15937271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 11832275 - 11832471
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||| |||||||||||||||||||| |||||| ||||||||| |||||||| |||| || ||||| || ||||||||| ||| |||||||||  ||    
T  11832275 gattttcgctagaattattttaattaatttttatgtatgtttatatgtgcttgtatgtgattatttgtctctatgtgtattttattcgggattagtgaat 11832374  T
Q  114 ttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaattat 209  Q
    |||  |||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||||| ||||| |||||||| ||||  |||||||||||||    
T  11832375 tttgacttaagaagggtattttattcattatagactcaggggtattttggtcatttggtgagcaagggtaaaatagttttttggttacgagaattat 11832471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 12252083 - 12252278
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||||||| | || || ||||| || ||||||||| | | |||||||||  |||    
T  12252083 attttcgctagaattattttaattaattattatgtgtgttcatatgtgcttgtatgcgattatttgtctctatgtgtattttactcgggattagtgaatt 12252182  T
Q  115 tttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaattat 209  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||| |||   | || ||||| |||||| ||||||  |||||||||||||    
T  12252183 tttgcttaagaagggtattttagtcgttttagactcaggggtattttggtcattttataagaaagggtaaaataatcttttggttacgagaattat 12252278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 11829299 - 11829097
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggatta 107  Q
    ||||| |||||||| |||| ||| ||| |||||||||||||||||||||||| | |||||| |||| || || || |||||||||||| |||  ||||||    
T  11829299 caacccgattttcgctagatttacttttattaattattatgtgtgtttatatattcttgtatgtgattatttatctctgtgtgtattttattcaggatta 11829200  T
Q  108 gtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaat 206  Q
    || ||||||  |||||| ||||||||||||||||||||||| ||| ||||||||||| ||| |||| | ||||  ||||| || ||||  ||||||||||    
T  11829199 gtggattttgacttaaggagggtattttagtcattttagacacaggggtattttggtcatttggtgggtaaggataaaattgtattttggttacgagaat 11829100  T
Q  207 tat 209  Q
    |||    
T  11829099 tat 11829097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 25660887 - 25661020
Alignment:
Q  16 ttttcgttagaattattttaatt-aattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    |||||| |||||||||||| ||| ||||||||||| ||||||||| |||||||| |||  |||||| | |||||||||||| ||| ||||||||| ||||    
T  25660887 ttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattgcctctgtgtgtattttattcgggattagtggatt 25660986  T
Q  115 tttgcttaagaagggtattttagtcattttagac 148  Q
    || |||||||||||||||||||||||||||||||    
T  25660987 ttggcttaagaagggtattttagtcattttagac 25661020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 25667292 - 25667425
Alignment:
Q  16 ttttcgttagaattattttaatt-aattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    |||||| |||||||||||| ||| ||||||||||| ||||||||| |||||||| |||  |||||| | |||||||||||| ||| ||||||||| ||||    
T  25667292 ttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattgcctctgtgtgtattttattcgggattagtggatt 25667391  T
Q  115 tttgcttaagaagggtattttagtcattttagac 148  Q
    || |||||||||||||||||||||||||||||||    
T  25667392 ttggcttaagaagggtattttagtcattttagac 25667425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 25673697 - 25673830
Alignment:
Q  16 ttttcgttagaattattttaatt-aattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    |||||| |||||||||||| ||| ||||||||||| ||||||||| |||||||| |||  |||||| | |||||||||||| ||| ||||||||| ||||    
T  25673697 ttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattgcctctgtgtgtattttattcgggattagtggatt 25673796  T
Q  115 tttgcttaagaagggtattttagtcattttagac 148  Q
    || |||||||||||||||||||||||||||||||    
T  25673797 ttggcttaagaagggtattttagtcattttagac 25673830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 25680122 - 25680255
Alignment:
Q  16 ttttcgttagaattattttaatt-aattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    |||||| |||||||||||| ||| ||||||||||| ||||||||| |||||||| |||  |||||| | |||| ||||||| ||| ||||||||| ||||    
T  25680122 ttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattgcctctgtatgtattttattcgggattagtggatt 25680221  T
Q  115 tttgcttaagaagggtattttagtcattttagac 148  Q
    || |||||||||||||||||||||||||||||||    
T  25680222 ttggcttaagaagggtattttagtcattttagac 25680255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 25688426 - 25688559
Alignment:
Q  16 ttttcgttagaattattttaatt-aattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    |||||| |||||||||||| ||| ||||||||||| ||||||||| |||||||| |||  |||||| | |||| ||||||| ||| ||||||||| ||||    
T  25688426 ttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattgcctctgtatgtattttattcgggattagtggatt 25688525  T
Q  115 tttgcttaagaagggtattttagtcattttagac 148  Q
    || |||||||||||||||||||||||||||||||    
T  25688526 ttggcttaagaagggtattttagtcattttagac 25688559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 12695503 - 12695649
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| |||||||||||||||||  | |||| |||||| |||| |||||| | |||| || ||||| ||||||| |||| ||| |||||||||||||||    
T  12695503 ttttcgctagaattattttaattatctcttatatgtgttgatatgtgcttgcatgtgatta-ttgtctctgtgtgaattttattcgggattagtagattt 12695601  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttgg 163  Q
    | |||||| |||| ||||||||||||||||||||||| ||||||||||    
T  12695602 tggcttaaaaaggatattttagtcattttagactcaggggtattttgg 12695649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 19659149 - 19659295
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| ||||| |  |||| ||||||||  ||||||||||| ||| ||||||||| |||||    
T  19659149 ttttcgctagaattattttaattatttattatgtgtgtttatatgtgcttttgtgtgattaattgtctatgtgtgtattttattcgggattagtggattt 19659248  T
Q  116 ttgcttaagaagggtattttagtca-ttttagactcagaggtatttt 161  Q
    |||    | |||||||||||||||| ||||||||| || ||||||||    
T  19659249 ttgtcctataagggtattttagtcatttttagactaaggggtatttt 19659295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 19631302 - 19631424
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    ||||||| ||||| ||| ||||||||||||||||||| |||||||  |||| |||||||| |||||||||||| ||| ||||||||| |||||| |        
T  19631302 tagaattgttttatttatttattatgtgtgtttatatgtgcttgtgtgtgattaattgtctctgtgtgtatttaattcgggattagttgattttaggcct 19631401  T
Q  123 agaagggtattttagtcatttta 145  Q
    |||||||||||||||||||||||    
T  19631402 agaagggtattttagtcatttta 19631424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 14 - 194
Target Start/End: Complemental strand, 20421722 - 20421542
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||||| |||||||| |||| |||||||| || ||| |||||   | ||||||||| ||     
T  20421722 gattttcgttagatttattttaattaatttttatatgtgtttatatgtgcttgtacgtgattaattgtctctatgtatatttaggtggggattagtggaa 20421623  T
Q  114 ttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgagaagggg-aaaatagtctttt 194  Q
    ||| |  | |||||||||||||||| ||||| | ||| ||||||||||||| |||  ||||| ||||| |||||||| ||||    
T  20421622 tttggtgttagaagggtattttagtgattttggtctc-gaggtattttggtcatttagtgagcaggggtaaaatagtatttt 20421542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 30104252 - 30104384
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||| || ||||| |||| ||  |||   ||||||||||| |||  |||||||| |      
T  30104252 gatttttgctagaattattttaattaatgattatgtgtgtttatatgtgtttgtatgtgattatctgtttttgtgtgtattttattcaggattagtggga 30104351  T
Q  114 ttttgcttaagaagggtattttagtcattttag 146  Q
    |||||||||||||||||||||| ||||||||||    
T  30104352 ttttgcttaagaagggtattttggtcattttag 30104384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 5348215 - 5348105
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | ||||||  ||| ||||||||  ||||||||||| ||| | ||||||| |||||    
T  5348215 ttttcgctagaattattttaattatttattatgtgtgtttatatgtacttgtatatgattaattgtctatgtgtgtattttattcgtgattagtggattt 5348116  T
Q  116 ttgcttaagaa 126  Q
    | |||||||||    
T  5348115 tggcttaagaa 5348105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 4657509 - 4657392
Alignment:
Q  26 aattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaaga 125  Q
    |||||||||||||| ||||||||||||||||||| |||||||| |||| |||||||| |  ||||||||| ||   |||||||||||||||  |||||      
T  4657509 aattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattaattgtctccatgtgtattttatccaggattagtagattttgacttaatg 4657410  T
Q  126 agggtattttagtcattt 143  Q
    ||||||||||||| ||||    
T  4657409 agggtattttagtaattt 4657392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 15044637 - 15044729
Alignment:
Q  103 gattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtctttt 194  Q
    ||||||| |||||| || |||| ||||||||||||||||||||||||||| ||||||||||| ||| |||||| ||||| |||||||||||||    
T  15044637 gattagtggattttggcctaaggagggtattttagtcattttagactcaggggtattttggtcatttggtgagcaagggtaaaatagtctttt 15044729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 56 - 190
Target Start/End: Complemental strand, 27053198 - 27053063
Alignment:
Q  56 atatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcattttagactcagagg 155  Q
    |||| |||||||| |||| |||||||   ||||||||||| |||| | ||| || ||||||  |||||||||||||||||||||||||||||||||| ||    
T  27053198 atatatgcttgtatgtgattaattgtatatgtgtgtattttatttagaattggtggattttgacttaagaagggtattttagtcattttagactcagggg 27053099  T
Q  156 tattttggttattaggtgag-aaggggaaaatagtc 190  Q
    || |||||| |||  ||||| ||||| |||||||||    
T  27053098 tagtttggtcatttagtgagcaagggcaaaatagtc 27053063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 7769997 - 7770157
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||| | |||| |||||||| ||| ||||||||||||||| ||| |||||||| |||| | |||||| ||| |||||||| || ||||||| |||||     
T  7769997 gatttttgctagatttatttta-ttatttattatgtgtgtttgtatgtgcttgtatgtgatttattgtctctgcgtgtattttatctgggattggtagag 7770095  T
Q  114 ttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    |||  |||| |||||||||||||||| |||  |||| |  ||||||||||| ||| ||||||    
T  7770096 tttgccttatgaagggtattttagtcgtttaggacttaatggtattttggtcatttggtgag 7770157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 19431798 - 19431651
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| |||| ||||||||||||||| || | ||||||||||| |||||||| |||| || ||| |  ||||  |||||   ||||||||||| |||||    
T  19431798 ttttcgctagatttattttaattaattttt-tatgtgtttatatgtgcttgtatgtgattatttgcctatgtgaatattttggttgggattagtggattt 19431700  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    | || | ||||||||||||||||||||||  ||| || |||||||||||    
T  19431699 tggcattagaagggtattttagtcattttgtacttaggggtattttggt 19431651  T

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Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 10935295 - 10935154
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    |||| ||||||||||||||||||| ||||||| |||| || || |  |||| || ||| |  ||||||||||| ||| |||||||||| |  || |||||    
T  10935295 tagatttattttaattaattattaagtgtgttaatatgtgtttatgtgtgattatttgcctttgtgtgtattttattcgggattagtaaacgttggctta 10935196  T
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||| | ||||||||| ||||||||||||  |||||| ||||    
T  10935195 agaatgttattttagttattttagactcaagggtattctggt 10935154  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 175
Target Start/End: Original strand, 17580658 - 17580799
Alignment:
Q  35 aattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattt 134  Q
    ||||| |||||||||||||||||||  | ||||  |||| || |||||  | ||||||||| ||| ||||||||| ||||||||  | ||||||||||||    
T  17580658 aattatttattatgtgtgtttatatgcgtttgtgtgtgattatttgtctatttgtgtattttattcgggattagtggatttttggctcagaagggtattt 17580757  T
Q  135 tagtcattt-tagactcagaggtattttggttattaggtgag 175  Q
    ||| |||||  | |||||| ||||||||||| |||| |||||    
T  17580758 tagacatttaaaaactcaggggtattttggtcattatgtgag 17580799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 16218348 - 16218410
Alignment:
Q  102 ggattagtagatttttgcttaagaagggtattttagtcat-tttagactcagaggtattttggt 164  Q
    |||||||| |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  16218348 ggattagtggattttggcttaagaagggtattttagtcatgtttagactcag-ggtattttggt 16218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 190
Target Start/End: Complemental strand, 13440887 - 13440774
Alignment:
Q  78 ttgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-a 176  Q
    ||||| |||||||||||| ||| ||||||||| |||||| ||  |||||| |||||||||| || ||||||| || |||||||| || ||| |||| | |    
T  13440887 ttgtctctgtgtgtattttattcgggattagtggattttggcaaaagaagtgtattttagttatgttagacttaggggtattttagtcatttggtgtgca 13440788  T
Q  177 aggggaaaatagtc 190  Q
    |||| |||||||||    
T  13440787 agggtaaaatagtc 13440774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 7854777 - 7854723
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  7854777 agaagggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 7854723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 11677195 - 11677273
Alignment:
Q  85 tgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtca-ttttagactcagaggtattttg 162  Q
    ||||||||||| ||||||||||||| ||||||||    | |||||||||||||||| ||||||||| || |||||||||    
T  11677195 tgtgtgtatttaatttgggattagtggatttttggcctataagggtattttagtcatttttagactaaggggtattttg 11677273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 19232584 - 19232530
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || |||||||||||||||  |||||||    
T  19232584 agaagggtattttagtcattttggacttaggggtattttggttattttgtgagaa 19232530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 45582426 - 45582365
Alignment:
Q  125 aagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    ||||||||||||||||||||||||| || ||||||||||| |||  ||||||| || |||||    
T  45582426 aagggtattttagtcattttagacttaggggtattttggtcattttgtgagaacggtaaaat 45582365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 2050609 - 2050555
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| |  ||||||||||| |||  |||||||    
T  2050609 agaagggtattttagtcattttagacttaagggtattttggtcattttgtgagaa 2050555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 3993366 - 3993312
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| |  ||||||||||| |||  |||||||    
T  3993366 agaagggtattttagtcattttagacttaagggtattttggtcattttgtgagaa 3993312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 12348731 - 12348785
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  12348731 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 12348785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 205
Target Start/End: Complemental strand, 12391483 - 12391322
Alignment:
Q  44 ttatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcattt 143  Q
    |||||||||||| ||| |||||||  || ||| |||||| |||||||||||| ||  |  ||||||||| ||| |||||  || ||||||||||||||||    
T  12391483 ttatgtgtgtttctatgtgcttgtttgt-aatcattgtctctgtgtgtattttatccgaaattagtagagtttggcttataaatggtattttagtcattt 12391385  T
Q  144 tagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaa 205  Q
    |  ||||   ||||||||||| ||| | |||| ||||  ||||||||||| |  |||||||||    
T  12391384 tgtactcgagggtattttggtcatttgatgagcaaggataaaatagtcttctggttacgagaa 12391322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 14304872 - 14304818
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  14304872 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 14304818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 51960569 - 51960623
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||| |||||||||||||||||||| |  ||||||||||| ||| ||||||||    
T  51960569 agaaggatattttagtcattttagacttaagggtattttggtcatttggtgagaa 51960623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 55513686 - 55513629
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaagggg 181  Q
    ||||||||||||||||| ||||||||| || ||||||||||| |||  |||||||||||    
T  55513686 agaagggtattttagtc-ttttagacttaggggtattttggtcattttgtgagaagggg 55513629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 5240168 - 5240221
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| ||| || ||||||||||| |||  |||||||    
T  5240168 gaagggtattttagtcattttaaacttaggggtattttggtcattttgtgagaa 5240221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 6146196 - 6146237
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  6146196 agaagggtattttagtcattttggacttaggggtattttggt 6146237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 10726823 - 10726734
Alignment:
Q  102 ggattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtc 190  Q
    |||||||| |||||| ||| |||||| ||||| || ||||||||||| ||  ||||||||||| |||  ||||| ||||| |||||||||    
T  10726823 ggattagtggattttggctcaagaagtgtattctaatcattttagacacatgggtattttggtcattttgtgagcaagggtaaaatagtc 10726734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 11328403 - 11328444
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  11328403 agaagggtaatttagtcattttggactcaggggtattttggt 11328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 16181369 - 16181410
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  16181369 agaagggtattttagtcattttggacttaggggtattttggt 16181410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 17955443 - 17955484
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  17955443 agaagggtattttagtcattttggacttaggggtattttggt 17955484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 19260295 - 19260344
Alignment:
Q  128 ggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  19260295 ggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 19260344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 22143758 - 22143799
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  22143758 agaagggtattttagtcattttggacttaggggtattttggt 22143799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 316932 - 316984
Alignment:
Q  125 aagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  316932 aagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 316984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 209
Target Start/End: Complemental strand, 21424104 - 21423908
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||  |||| || ||||||||| |||  ||||| || |||    
T  21424104 gattttcgctagaattattttaattaattattatgtgtgtttatatgtgcttgtatgtgattatctgtccctttgtgtattttattcaggattggtggat 21424005  T
Q  114 ttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaattat 209  Q
    ||| ||||||||| |||||||||||||||||| |||||| ||||||||| | ||| |||||| ||||| |||||||||||||  | |||||||||||    
T  21424004 tttggcttaagaatggtattttagtcattttaaactcagtggtattttgatcatttggtgagaaagggtaaaatagtcttttggtcacgagaattat 21423908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 23475187 - 23475334
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||| |||||||||||| |||||| |||||||| |||| |||||||| |||||||||||| | || ||||||||  ||||    
T  23475187 ttttcgctagaattattttaattatttattatgtgtgattatatgtgcttgtatgtgattaattgtctctgtgtgtattttacttaggattagtgaattt 23475286  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |  | |||||||||||||||||||||||||||||||| |||||||||||    
T  23475287 tgtcctaagaagggtattttagtcattttagactcag-ggtattttggt 23475334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 209
Target Start/End: Complemental strand, 21981640 - 21981445
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |||||||| |||| || ||||| |  ||||||| | ||| ||||||||| ||||    
T  21981640 atttttgttagaattattttaattaattattatgtgtgttcatatgtgcttgtatgtgattatttgtctcactgtgtatattattcgggattagtggatt 21981541  T
Q  115 tttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaattat 209  Q
    || ||||||||| |||||||||||||||| |||||||  |||||||   | ||| |||||| ||||| ||||| |||||||  || ||||||||||    
T  21981540 ttggcttaagaatggtattttagtcatttcagactcaagggtatttcaatcatttggtgagtaagggtaaaattgtcttttggttgcgagaattat 21981445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 175
Target Start/End: Original strand, 18621240 - 18621384
Alignment:
Q  31 ttttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggt 130  Q
    |||| |||| ||||||||||||||||||| |||||||| |||| |||||||| |||||||||||| |||   ||||  |  ||||| |||||||||||||    
T  18621240 tttttattatttattatgtgtgtttatatgtgcttgtatgtgattaattgtctctgtgtgtattttattctagatttatgaattttggcttaagaagggt 18621339  T
Q  131 attttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||    
T  18621340 attttagtcattttggactcaggggtattttggttatttggtgag 18621384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 20408822 - 20408636
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| || |||||||||||||| ||||||||||||||||||| |  ||||  |||| || |||||  ||||||||| | |||||| ||| || |||||    
T  20408822 ttttcgctataattattttaattacttattatgtgtgtttatatgtttttgtgtgtgattatttgtctatgtgtgtatattatttggtattggtcgattt 20408723  T
Q  116 ttgcttaagaagggtattttagtcatttt-agactcagaggtattttggttattaggtgag-aaggggaaaatagtc-ttttaatta 199  Q
    | ||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||| ||||| ||| ||||| |||||||||    
T  20408722 tggcttaagaagggtattttagtcattttcagactcggaggtattttggtcatttggtgagcaagggtaaattagtcattttaatta 20408636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 21979429 - 21979227
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggatta 107  Q
    ||||| |||||| |||||||||||||||| ||| ||| |||||  || |||| |||||||| |||| || ||||| |  ||||||| | ||| |||||||    
T  21979429 caacccgatttttgttagaattattttaactaaatatgatgtgctttcatatgtgcttgtatgtgattatttgtctcactgtgtatattattcgggatta 21979330  T
Q  108 gtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaat 206  Q
    || |||||| |||||||||||||||||||||||||| |||||||  |||||||  || ||| |||||| ||||| |||||||||||||  || |||||||    
T  21979329 gtggattttagcttaagaagggtattttagtcatttcagactcaagggtatttcagtcatttggtgagtaagggtaaaatagtcttttggttgcgagaat 21979230  T
Q  207 tat 209  Q
    |||    
T  21979229 tat 21979227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 21721077 - 21720928
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| |||||| | |||||||| ||||||||||||||||||| |||| ||| |||| |||||||| |||||||||||| ||| || |||||| |||||    
T  21721077 ttttcgctagaatcactttaattatttattatgtgtgtttatatgtgctcgtatgtgattaattgtctctgtgtgtattttattcggaattagtggattt 21720978  T
Q  116 ttgcttaagaagggtattttagtca-ttttagactcagaggtattttggt 164  Q
    | |    | |||| ||||||||||| |||||||||| | |||||||||||    
T  21720977 tcggcctataaggatattttagtcatttttagactctggggtattttggt 21720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 24243638 - 24243755
Alignment:
Q  78 ttgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-a 176  Q
    ||||| |||||||||||  ||| ||||||||| ||||||   ||||||| |||||||||||||||||| |||||| ||||||||||| |||  ||||| |    
T  24243638 ttgtctctgtgtgtattctattcgggattagtggattttgttttaagaaaggtattttagtcattttaaactcaggggtattttggtcattttgtgagca 24243737  T
Q  177 aggggaaaatagtctttt 194  Q
    |||| ||| |||||||||    
T  24243738 agggtaaattagtctttt 24243755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 19507781 - 19507640
Alignment:
Q  11 cctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagta 110  Q
    |||||||||||||||| ||||||||||||||| |||| |||||||||   ||||||||         ||||| ||||||||| |||  ||||||||||||    
T  19507781 cctgattttcgttagatttattttaattaattcttatatgtgtttattcgtgcttgtat--------ttgtctctgtgtgtaattcggttgggattagta 19507690  T
Q  111 gatttttgcttaagaagggtattttagtcattttagactcagaggtattt 160  Q
    |||||| |  | || ||| |||||||||||||||||||||| | ||||||    
T  19507689 gattttggtgttaggaggatattttagtcattttagactcaaatgtattt 19507640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 21218655 - 21218786
Alignment:
Q  31 ttttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggt 130  Q
    ||||||||| |||||||| |||||| |||  || |||| |||| ||||||||  || |||||||| ||| |||| || |  |||||  ||||||||||||    
T  21218655 ttttaatta-ttattatgagtgtttttatgcgcctgtatgtgactaattgtctttgggtgtattttattcgggaataatgaattttgtcttaagaagggt 21218753  T
Q  131 attttagtca-ttttagactcagaggtattttg 162  Q
    |||||||||| |||||||||||| |||||||||    
T  21218754 attttagtcatttttagactcaggggtattttg 21218786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 22615928 - 22615817
Alignment:
Q  31 ttttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggt 130  Q
    ||||||||| |||||||||||||||||||  ||||||| |||| || || ||  |  |||||||| |||| ||||||||  ||||||| |  ||||||||    
T  22615928 ttttaattatttattatgtgtgtttatatgcgcttgtatgtgattatttatctttaagtgtattttatttaggattagtgaatttttggtctagaagggt 22615829  T
Q  131 attttagtcatt 142  Q
    ||||||||||||    
T  22615828 attttagtcatt 22615817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 13222103 - 13222171
Alignment:
Q  97 atttgggattagtagatttttgcttaagaagggtattttagtca-ttttagactcagaggtattttggt 164  Q
    ||||||| |||||||||||||| |  |||||||||||||||||| |||||||||||| ||| |||||||    
T  13222103 atttggggttagtagatttttggtctagaagggtattttagtcatttttagactcaggggtgttttggt 13222171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 20532239 - 20532185
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||  |||||||    
T  20532239 agaagggtattttagtcattttagacttaaaggtattttggtcattttgtgagaa 20532185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 49996615 - 49996687
Alignment:
Q  3 tataccaacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaata 76  Q
    |||| |||||||||||||||||||||||||||||||| || | || ||||||| ||| |||||||  |||||||    
T  49996615 tataacaacctgattttcgttagaattattttaattatttttaatatgtgttt-tatgtgcttgtgtgtgaata 49996687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Complemental strand, 21403159 - 21403088
Alignment:
Q  104 attagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    |||||| ||||||  ||||||||||||||||||||||||||||  |  | ||||||||||| ||| ||||||    
T  21403159 attagtggattttgtcttaagaagggtattttagtcattttagcatatggggtattttggtcatttggtgag 21403088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 20446475 - 20446421
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  20446475 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 20446421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 20887268 - 20887306
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtatttt 161  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  20887268 agaagggtattttagtcattttagacttaggggtatttt 20887306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 20932134 - 20932080
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| |  ||||||||||| |||  |||||||    
T  20932134 agaagggtattttagtcattttagacttaagggtattttggtcattttgtgagaa 20932080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 21403216 - 21403182
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttat 57  Q
    ||||||||||||||||| |||||||||||||||||    
T  21403216 tagaattattttaattatttattatgtgtgtttat 21403182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 41212845 - 41212791
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||  |||||||    
T  41212845 agaagggtattttagtcattttaaacttaggggtattttggtcattttgtgagaa 41212791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 9783511 - 9783552
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| ||| |||||||||||||||| |||||||||||    
T  9783511 agaagggtaatttggtcattttagactcaggggtattttggt 9783552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 13103948 - 13103907
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||| |||||||||||||||||||||| || |||||||||||    
T  13103948 agaatggtattttagtcattttagacttaggggtattttggt 13103907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 17864680 - 17864756
Alignment:
Q  87 tgtgtatttcatttgggattagtagattttt-gcttaagaagggtattttagtca-ttttagactcagaggtattttg 162  Q
    |||||||||  |||||||||||  ||||||| || || ||||||||||||||||| ||||||||| ||||||||||||    
T  17864680 tgtgtatttgttttgggattagaggatttttagccta-gaagggtattttagtcatttttagactaagaggtattttg 17864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 21719058 - 21718997
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaa 184  Q
    |||| ||||||||||||||||| ||||  | ||||||||||| ||| |||||||| ||||||    
T  21719058 agaatggtattttagtcattttggacttgggggtattttggtcatttggtgagaacgggaaa 21718997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 36355708 - 36355749
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  36355708 agaagggtaatttagtcattttggactcaggggtattttggt 36355749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 49968466 - 49968414
Alignment:
Q  125 aagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  49968466 aagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 49968414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 49996724 - 49996764
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttgg 163  Q
    ||||||||| |||||||||||| ||||||| ||||||||||    
T  49996724 agaagggtaatttagtcattttggactcaggggtattttgg 49996764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 207
Target Start/End: Complemental strand, 18996087 - 18995882
Alignment:
Q  3 tataccaacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgg 102  Q
    |||| ||||| ||||||||  | | |||||||||||||||||||||||||||||| | ||||||||  ||| || ||||| |||||||| ||| ||| ||    
T  18996087 tataacaacccgattttcgcaatagttattttaattaattattatgtgtgtttatttgtgcttgtatatgattatttgtctctgtgtgttttttattcgg 18995988  T
Q  103 gattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacg 201  Q
    ||||||| |||||| || || |||||||||||||||||||||| |||||| ||||||||||| ||| |||||| ||||| |||||||||||||  |||||    
T  18995987 gattagtggattttagcgtaggaagggtattttagtcattttaaactcaggggtattttggtcatttggtgagcaagggtaaaatagtcttttggttacg 18995888  T
Q  202 agaatt 207  Q
    ||||||    
T  18995887 agaatt 18995882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 28775067 - 28774889
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| |||||| |||||||||| |||||| ||||| |||||| || |||||  ||| || |||||  ||||||||||| |||  |||||||| |||||    
T  28775067 ttttcgctagaat-attttaattatttattacgtgtgattatatgtgtttgtatatgattatttgtctgtgtgtgtattttattcaggattagtggattt 28774969  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtctttt 194  Q
    | ||||||||||||||||||||||||||||| ||||  ||||||||||| ||| |||||| ||||| ||| |||||||||    
T  28774968 tggcttaagaagggtattttagtcattttaggctcatgggtattttggtcatttggtgagcaagggcaaattagtctttt 28774889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 20511147 - 20510977
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||| || ||||| |||| |||||||| | ||| |||||| ||| | ||||||| || ||    
T  20511147 ttttcgctagaattattttaattatttattatgtatgtttatatgtgtttgtatgtgattaattgtctcggtgcgtattttattcgagattagtggaatt 20511048  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    |  |||| ||||||||||| |||||||||||| |||| ||||||||||| |||  ||||||| ||| ||||    
T  20511047 tgacttaggaagggtatttaagtcattttagattcaggggtattttggtcatttagtgagaaagggtaaat 20510977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 164
Target Start/End: Complemental strand, 24282438 - 24282302
Alignment:
Q  26 aattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaaga 125  Q
    |||||||||||||| ||||||| |||||| |||| ||||||||  ||| |||||||| || ||| ||||| ||| |||||| || |||||| ||||||||    
T  24282438 aattattttaattatttattatttgtgtt-atatgtgcttgtatatgattaattgtctctttgtatattttattcgggatt-gtggattttggcttaaga 24282341  T
Q  126 agggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  24282340 agggtattttggtcattttagactcaggggtattttggt 24282302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 19901698 - 19901819
Alignment:
Q  43 attatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattttt-gcttaagaagggtattttagtcat 141  Q
    ||||||||||||||||| | |||||| |||| ||||| ||  ||||||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||     
T  19901698 attatgtgtgtttatatgttcttgtatgtgattaattttctttgtgtgtattttatttgggattagtggatttttggcttaa-aagggtattttagtcaa 19901796  T
Q  142 tttagactcagaggtattttggt 164  Q
    ||||||| ||  |||||||||||    
T  19901797 tttagacacaagggtattttggt 19901819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 34133556 - 34133705
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaat-aattgtcactgtgtgtatttcatttgggattagtaga 112  Q
    |||||||||||||||||||||||||| || ||||| ||| |||||| || || |  ||| || |||||||  | ||||||||| ||| |||||||||  |    
T  34133556 gattttcgttagaattattttaattatttgttatgcgtgcttatatgtgtttat--gtgcattaattgtctatttgtgtattttattcgggattagtgaa 34133653  T
Q  113 tttttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||| |||||||||| ||||||||||| |||||||||||  |||||||||||    
T  34133654 ttttggcttaagaagagtattttagtctttttagactcaagggtattttggt 34133705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 27354337 - 27354212
Alignment:
Q  41 ttattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtca 140  Q
    ||||||| ||||||||||| |||||||  | || |||||||| |||||| ||||| ||| ||||||||| |||||||| |  ||||||||||||||||||    
T  27354337 ttattatatgtgtttatatgtgcttgtgtgagattaattgtctctgtgtatattttattcgggattagtggatttttgatatagaagggtattttagtca 27354238  T
Q  141 --ttttagactcagaggtattttggt 164  Q
      |||||||||||  |||||||||||    
T  27354237 ttttttagactcaagggtattttggt 27354212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 19285400 - 19285280
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    ||||||||||||||||| |||||||||||||| ||||  | ||||  |||| |||||||| |||||||||||| |||||||||| || ||||||||        
T  19285400 tagaattattttaattatttattatgtgtgtt-atatgcgtttgtgtgtgattaattgtctctgtgtgtattttatttgggatttgtggatttttggcct 19285302  T
Q  123 agaagggtattttagtcatttt 144  Q
    | ||||||||||||||||||||    
T  19285301 ataagggtattttagtcatttt 19285280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 34896088 - 34896236
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||| ||||||||||||||| |||||| ||||||| | |||| | |||||||  |||| || ||  | |||||||||||| ||| || ||||||  || |    
T  34896088 ttttagttagaattattttatttaattgttatgtgcggttatgtgtgcttgtgtgtgattatttacctctgtgtgtattttattcggaattagtgaatat 34896187  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    | | |||||||||||||||| ||||||||||| |||  |||||||||||    
T  34896188 tggtttaagaagggtatttttgtcattttagattcaagggtattttggt 34896236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 21655051 - 21654893
Alignment:
Q  5 taccaacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttggga 104  Q
    ||||| |||| |||| | || |||||| ||||||| |||||||||||| ||||||  ||||||  |||| || ||||  |||||||||||| ||||| ||    
T  21655051 taccagcctgttttttgctaaaattatcttaattatttattatgtgtgattatatgcgcttgtgtgtgactatttgtatctgtgtgtattttatttgtga 21654952  T
Q  105 ttagtagatttttgcttaagaagggtattttagtca-ttttagactcagaggtattttg 162  Q
    |||||  |||||||    ||||| |||||||||||| ||||||||| || |||||||||    
T  21654951 ttagtgaatttttggcctagaagagtattttagtcatttttagacttaggggtattttg 21654893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 21909424 - 21909565
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattttt-gctt 121  Q
    ||||||||||||||||| ||||||| ||||||||||| ||  | |  || | || ||||   ||||||||||| ||||||| ||||| ||||||| || |    
T  21909424 tagaattattttaattatttattatatgtgtttatatgtgtctatgtgtcattatttgtttatgtgtgtatttaatttggggttagtggatttttagcct 21909523  T
Q  122 aagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    | |||||||||||||||||||||| ||| || |||||||||||    
T  21909524 a-gaagggtattttagtcattttaaactaaggggtattttggt 21909565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45572795 - 45572874
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45572795 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45572874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45576462 - 45576541
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45576462 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45576541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45580129 - 45580208
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45580129 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45580208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45583796 - 45583875
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45583796 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45583875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45587463 - 45587542
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45587463 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45587542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45591130 - 45591209
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45591130 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45591209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45594797 - 45594876
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45594797 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45594876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45598464 - 45598543
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45598464 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45598543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45602131 - 45602210
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45602131 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45602210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45605798 - 45605877
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45605798 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45605877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45609465 - 45609544
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45609465 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45609544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45613132 - 45613211
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45613132 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45613211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 45616799 - 45616878
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||| ||| |||| |||||| | || |||||||||    
T  45616799 attttcgttagatttattttaattaatt-ttatatgtgtttatatgtgctcgtatgtgattaattgcctctatgtgtattt 45616878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 25875357 - 25875420
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    |||||||||||||||||||||| |||| || ||||||||||| ||| |||||||| ||| ||||    
T  25875357 agaagggtattttagtcattttggacttaggggtattttggtcatttggtgagaacgggtaaat 25875420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 9652343 - 9652397
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||  |||||||    
T  9652343 agaagggtattttagtcattttagacttagaggcattttggtcattttgtgagaa 9652397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 25264881 - 25264935
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  25264881 agaagggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 25264935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 43642420 - 43642474
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  43642420 agaagggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 43642474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 16446556 - 16446515
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  16446556 agaagggtaatttagtcattttagactaagaggtattttggt 16446515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 34877934 - 34877873
Alignment:
Q  83 actgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcatttt 144  Q
    |||||||||||||   |||||||||||||||||| || | ||||||||||||| ||||||||    
T  34877934 actgtgtgtattttgattgggattagtagattttggcgttagaagggtattttggtcatttt 34877873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 19110464 - 19110507
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgt 51  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||    
T  19110464 caacctgtttttcgttagaattattttatttatttattatgtgt 19110507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 24699273 - 24699316
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatat 59  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||    
T  24699273 ttttcgatagaattattttaattatttattatatgtgtttatat 24699316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 463516 - 463462
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| |  ||||||||||| |||  |||||||    
T  463516 agaagggtattttagtcattttagacttaagggtattttggtcattttgtgagaa 463462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 20626790 - 20626844
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| |  ||||||||||| |||  |||||||    
T  20626790 agaagggtattttagtcattttagacttaagggtattttggtcattttgtgagaa 20626844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 25602857 - 25602803
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||| ||||| || ||||||||||| |||  |||||||    
T  25602857 agaagggtattttagtcatttaagacttaggggtattttggtcattttgtgagaa 25602803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 32466676 - 32466623
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| |  ||||||||||| ||| ||||||||    
T  32466676 agaagggtattttagtcattttagacttatgggtattttggtcatt-ggtgagaa 32466623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 36981919 - 36981973
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||| |||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  36981919 agaatggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 36981973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 42535433 - 42535379
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  42535433 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 42535379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 723196 - 723155
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  723196 agaagggtaatttagtcattttggactcaggggtattttggt 723155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 23163911 - 23164004
Alignment:
Q  86 gtgtgtatttcatttgg-gattagtagatttttgcttaagaagggtattttagtcatttta-gactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||| |||| | ||||||| |||||| ||||| | ||||||||||||||||||||  |||||  ||||||||||| |||  |||||||    
T  23163911 gtgtgtattttattttgagattagtggattttggcttacggagggtattttagtcattttataactcaacggtattttggtcattttgtgagaa 23164004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 23575168 - 23575261
Alignment:
Q  86 gtgtgtatttcatttgg-gattagtagatttttgcttaagaagggtattttagtcatttta-gactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||| |||| | ||||||| |||||| ||||| | ||||||||||||||||||||  |||||  ||||||||||| |||  |||||||    
T  23575168 gtgtgtattttattttgagattagtggattttggcttacggagggtattttagtcattttataactcaacggtattttggtcattttgtgagaa 23575261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 23821223 - 23821264
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  23821223 agaagggtaatttagtcattttggactcaggggtattttggt 23821264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 23830302 - 23830343
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  23830302 agaagggtaatttagtcattttggactcaggggtattttggt 23830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 24293951 - 24293992
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  24293951 agaagggtaatttagtcattttggactcaggggtattttggt 24293992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 29744103 - 29744172
Alignment:
Q  75 taattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcatttt 144  Q
    ||||||||  ||||||||||| ||||||||||||| |||||||| |  |||| ||| ||||||| |||||    
T  29744103 taattgtctttgtgtgtatttaatttgggattagtggatttttggtctagaaaggtgttttagtgatttt 29744172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 39665235 - 39665276
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttat 57  Q
    |||||||||| ||||||||| ||| |||||||||||||||||    
T  39665235 ttttcgttaggattattttatttatttattatgtgtgtttat 39665276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 19794169 - 19794209
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttgg 163  Q
    |||||||||||||||||||||| |||| || ||||||||||    
T  19794169 agaagggtattttagtcattttggacttaggggtattttgg 19794209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 24086871 - 24086911
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttgg 163  Q
    ||||||||| |||||||||||| ||||||| ||||||||||    
T  24086871 agaagggtaatttagtcattttggactcaggggtattttgg 24086911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 24516849 - 24516666
Alignment:
Q  11 cctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagta 110  Q
    ||||||||| | || ||||||||||||||||||||||||| |||||||| |||||||| |||| |||||||| ||||||||||||  |||| |||||||     
T  24516849 cctgatttttgctaaaattattttaattaattattatgtgcgtttatatgtgcttgtatgtgattaattgtctctgtgtgtattt--tttgagattagtg 24516752  T
Q  111 gatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtctttta 195  Q
    ||| || |||||  ||||||||||||||| ||||||| ||| |||||||||||| ||| | |||| ||||| ||||||||||||||    
T  24516751 gatcttggcttattaagggtattttagtcgttttagattcaaaggtattttggtcatttgatgagcaagggtaaaatagtctttta 24516666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 17170395 - 17170245
Alignment:
Q  26 aattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaaga 125  Q
    |||||||||||||| |||||||||||||||||||  ||||||| |||| |||||||| |||||||||||| |||  |||||||| |||||||||| |  |    
T  17170395 aattattttaattatttattatgtgtgtttatatgcgcttgtatgtgattaattgtctctgtgtgtattttattcaggattagtggatttttgctcatta 17170296  T
Q  126 agggtattttagtca-ttttagactcagaggtattttggttattaggtgag 175  Q
     |||||||||||||| |||||||||||  ||||||||||| ||| ||||||    
T  17170295 tgggtattttagtcatttttagactcaagggtattttggtcatttggtgag 17170245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 19315715 - 19315850
Alignment:
Q  26 aattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaaga 125  Q
    |||||||||||||| | ||||||||||||||||| |||||||| |||| || ||||| |||||| ||||| ||| ||||||||| | |||| ||||||||    
T  19315715 aattattttaattattcattatgtgtgtttatatgtgcttgtatgtgattatttgtctctgtgtctattttattcgggattagtgggttttggcttaaga 19315814  T
Q  126 agggtattttagtcattttagactcagaggtatttt 161  Q
    | ||||||||||||||||| ||||||  ||||||||    
T  19315815 aaggtattttagtcattttggactcatgggtatttt 19315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 22446864 - 22446744
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||| ||  |||| |||| |  |||||  |||| ||||||||||| |||||||| |||    
T  22446864 gattttcgctagaattattttatttaattattatgtgtgtttatatgtgtgtgtatgtgattgtttgtctatgtgcgtatttcatttcggattagtggat 22446765  T
Q  114 ttttgcttaagaagggtattt 134  Q
    ||| |||| ||||||||||||    
T  22446764 tttggcttcagaagggtattt 22446744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 209
Target Start/End: Complemental strand, 31480373 - 31480180
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||  ||| || ||||  |||| ||||||| ||||||||||| | |||    
T  31480373 gattttcgctagaattattttaatta-tcattatgtgtgtttatatgtgcttgtatatgattatttgtt-ctgtatgtattttatttgggattaatggat 31480276  T
Q  114 ttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaattat 209  Q
    ||| ||||  ||| ||||||||||| ||||| ||||||| |||| ||||| | || |||||| ||||  |||||||||||||  ||| |||||||||    
T  31480275 tttggcttgtgaaaggtattttagttattttggactcaggggta-tttgggtctttggtgagcaaggttaaaatagtcttttggttatgagaattat 31480180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 18223374 - 18223502
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| | || ||||| |   ||||| |||||   | ||||||||| || |    
T  18223374 attttcgctagaattattttaattatttattatgtgtgtttatatgtgcttgtatgcgattaattatatttgtgtatattttgctcgggattagtggagt 18223473  T
Q  115 tttgcttaagaagggtattttagtcattt 143  Q
    || |||||||||| |||||||| ||||||    
T  18223474 ttggcttaagaagagtattttaatcattt 18223502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 22826943 - 22827089
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||| |||| || | ||| |||||||||||| |||  ||||||||     || |||||    
T  22826943 tagaattattttaattaattattatgtgtgtctatatgttcttgtatgtgattattcgtctctgtgtgtattttattcaggattagt-----ttggctta 22827037  T
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtga 174  Q
    ||||||| | ||||||||||| ||||| |  || |||||||| ||| |||||    
T  22827038 agaagggcaatttagtcatttcagacttaagggcattttggtcatttggtga 22827089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 199
Target Start/End: Original strand, 10176023 - 10176206
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||| |||||||||||  |||||| || ||||| |||| || || |  |  |||||||||  || ||||||||| |||||    
T  10176023 ttttcgctagaattattttaattatttattatgtgt--ttatatgtgtttgtatgtgattatttatatcgatgtgtatttttttcgggattagtggattt 10176120  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtc-ttttaatta 199  Q
    | || | ||||| |||||||||||||||||| |||||||| || ||||| ||| |  ||| ||||| ||||||||| |||||||||    
T  10176121 tggcctgagaagagtattttagtcattttaggctcagaggcatcttggtcatttgacgagcaagggtaaaatagtcattttaatta 10176206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 19858752 - 19858854
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||   |||||  |||| || ||||| |||||||||||| |||||||| ||||  ||||    
T  19858752 ttttcgttagaattattctaattatttattatgtgtggttatatgctcttgtgtgtgattatttgtctctgtgtgtatttaatttgggactagtgaattt 19858851  T
Q  116 ttg 118  Q
    |||    
T  19858852 ttg 19858854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 27182015 - 27182069
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||| ||||||||    
T  27182015 agaagggtattttagtcattttagacttaggggtattttggtcatttggtgagaa 27182069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 20726426 - 20726479
Alignment:
Q  111 gatttttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||| | ||||||||||||||||||||||||||| ||||| |||||||||||    
T  20726426 gattttggtttaagaagggtattttagtcattttagtctcaggggtattttggt 20726479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 7729251 - 7729210
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  7729251 agaagggtaatttagtcattttggactcagaggtattttggt 7729210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 20728482 - 20728422
Alignment:
Q  85 tgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcatttta 145  Q
    ||||||||||| |||||||||||||  ||||||| |  |||| ||||||||||||||||||    
T  20728482 tgtgtgtattttatttgggattagtgaatttttggtctagaaaggtattttagtcatttta 20728422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 19406366 - 19406303
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    ||||||||| |||||||||||| |||| |||||||||||||| |||  ||||||| ||| ||||    
T  19406366 agaagggtaatttagtcattttggacttagaggtattttggtcattttgtgagaacgggtaaat 19406303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 24182555 - 24182618
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  ||||||| ||| ||||    
T  24182555 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaacgggtaaat 24182618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 16596299 - 16596261
Alignment:
Q  126 agggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  16596299 agggtaatttagtcattttagactcaggggtattttggt 16596261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 23515354 - 23515300
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  23515354 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 23515300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 24194990 - 24194877
Alignment:
Q  78 ttgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcatttt-agactcagaggtattttggttattaggtgag- 175  Q
    ||||| || ||| ||||| ||| ||||||||| ||||||||    |||||| |||||||| |||||| |||||||| ||||||||||| ||| | ||||     
T  24194990 ttgtctctctgtttattttattcgggattagtggatttttggcccagaaggttattttagccatttttagactcaggggtattttggtcatttgatgagc 24194891  T
Q  176 aaggggaaaatagt 189  Q
    ||||| ||||||||    
T  24194890 aagggtaaaatagt 24194877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 26260406 - 26260459
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgt 67  Q
    |||||||| |||| ||||||| |||||||||||||||||| | ||| |||||||    
T  26260406 gattttcgctagatttatttttattaattattatgtgtgtatttatatgcttgt 26260459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 32951482 - 32951442
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  32951482 agaagggtattttagtcattttagacttag-ggtattttggt 32951442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 37984175 - 37984134
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  37984175 agaagggtaatttagtcattttggactcaggggtattttggt 37984134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 2993 - 2821
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    |||||||| |||||||| ||||| ||| ||||||||| ||||||||  ||| || |||||  ||||||||||| ||| ||||||| | ||||||||||||    
T  2993 tagaattaatttaattatttattttgtatgtttatatgtgcttgtatctgattatttgtctttgtgtgtattttattcgggattactggatttttgctta 2894  T
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtctttt 194  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||| |||||| ||||| ||| |||||||||    
T  2893 agaagggtattttagtcattttagtctcaggggtattttggtcatttggtgagcaagggtaaattagtctttt 2821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 61929 - 61754
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||| || || || |||| |||||||| |||||||||||| ||  ||||||||| |||||    
T  61929 ttttcgctagaattattttaattatttattatgtgtgtctatatttgtttatatgtgattaattgtctctgtgtgtattttataagggattagtggattt 61830  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtc 190  Q
    | ||||||||| | ||||||||||||||||||||||| | |||||| || ||| |||||| ||||| |||||||||    
T  61829 tggcttaagaaagatattttagtcattttagactcagggatattttagtcatttggtgagcaagggtaaaatagtc 61754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 50653 - 50707
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  50653 agaagggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 50707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 11773292 - 11773439
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| |||||||  |||| || ||||| |||||||||||| ||| ||||||||| |||||    
T  11773292 ttttcgttaaaattattttaattatttattatgtgtgtttatatgtgcttgtgtgtgactatttgtctctgtgtgtattttattcgggattagtggattt 11773391  T
Q  116 ttgcttaagaagggtattttagtca-ttttagactcagaggtattttg 162  Q
    | | ||||||||||||||||||||| |||||||||||| | |||||||    
T  11773392 tggtttaagaagggtattttagtcatttttagactcagggatattttg 11773439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 18083338 - 18083187
Alignment:
Q  24 agaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaa 123  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||| |||| || || || | |||||||||| | |||||||||||||||||| ||||||    
T  18083338 agaattattttaattatttattatatgtgtttatatgtgcttgtatgtgattatttttcccagtgtgtattttacttgggattagtagattttggcttaa 18083239  T
Q  124 gaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    |||||||||||||||||||||||||| |  || |||||||| ||| ||||||    
T  18083238 gaagggtattttagtcattttagacttaagggcattttggtcatttggtgag 18083187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 13761027 - 13761175
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| | ||||||||||||||| ||||||||||| ||||||| | |||||| |||| || |||||  ||||||||||| ||| |||||||||  ||||    
T  13761027 ttttcgctggaattattttaattatttattatgtgtatttatatgtacttgtatgtgattatttgtctatgtgtgtattttattcgggattagttaattt 13761126  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    | ||||||||| || |||||||||||||||||||||  ||||| |||||    
T  13761127 tggcttaagaatggcattttagtcattttagactcatgggtatcttggt 13761175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 3169561 - 3169695
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| |||||||||||||| || ||||||||||||||||||| |  ||| | ||||  | || ||  |||||||||||  || |||||| || |||||    
T  3169561 ttttcgctagaattattttaaatatttattatgtgtgtttatatgttgttgcatgtgatcatttatctttgtgtgtattttcttcgggattggtggattt 3169660  T
Q  116 ttgcttaagaagggtattttagtcattttagactc 150  Q
    | |||||||||||||||||||||||||||||||||    
T  3169661 tggcttaagaagggtattttagtcattttagactc 3169695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 8323317 - 8323397
Alignment:
Q  64 ttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcatttt 144  Q
    ||||| |||| |||||||| |||||||||||| ||||| |||||||  |||||||  | ||||||||||||||||||||||    
T  8323317 ttgtatgtgattaattgtctctgtgtgtattttatttgagattagtgaatttttggcttagaagggtattttagtcatttt 8323397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 144
Target Start/End: Original strand, 18363106 - 18363222
Alignment:
Q  28 ttattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaag 127  Q
    |||||||| ||  ||||||| | ||||||||| |||||||| |||| || ||| |  |||||||||||   |||||||| ||||||||| || | |||||    
T  18363106 ttattttatttttttattatatatgtttatatgtgcttgtatgtgattatttgcctatgtgtgtattttggttgggattggtagattttggcgttagaag 18363205  T
Q  128 ggtattttagtcatttt 144  Q
    |||||||||||||||||    
T  18363206 ggtattttagtcatttt 18363222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 34240642 - 34240683
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  34240642 agaagggtaatttagtcattttagactcagaggtattttggt 34240683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 16197762 - 16197719
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatat 59  Q
    |||||||||||||||||||||||| ||||||| |||||||||||    
T  16197762 ttttcgttagaattattttaattatttattatatgtgtttatat 16197719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 6459444 - 6459524
Alignment:
Q  85 tgtgtgtatttcatttgggattagtagattttt-gcttaagaagggtattttagtcattttagactcagagg-tattttggt 164  Q
    ||||||||||| ||||||||||||| ||||||| || | |||||||||||||||||||||| ||| || ||| |||||||||    
T  6459444 tgtgtgtatttgatttgggattagtggatttttagcct-agaagggtattttagtcattttggacgcataggatattttggt 6459524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 8326515 - 8326628
Alignment:
Q  64 ttgtaagtgaataattgtcactgtgtgtatttcatttgg-gattagtagatttttgcttaagaagggtattttagtc-attttagactcagaggtatttt 161  Q
    ||||| |||| |||||||| ||||||||||||  |||   ||||||| ||||||||    ||||||||||||||||| |||||||| ||||||||| |||    
T  8326515 ttgtatgtgattaattgtctctgtgtgtattttttttttagattagtggatttttggcctagaagggtattttagtcaattttagaatcagaggtagttt 8326614  T
Q  162 ggttattaggtgag 175  Q
    ||| ||| ||||||    
T  8326615 ggtcatttggtgag 8326628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 12193239 - 12193159
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    ||||||||||||| ||||||||||||||| || | ||||||||||| ||| |||| |||| |||||| | |||| |||||||    
T  12193239 gattttcgttagatttattttaattaatt-ttttatgtgtttatatgtgcatgtatgtgattaattgcctctgtatgtattt 12193159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 29740554 - 29740658
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||||||||||||||||||||   ||||||||||| |||||| || || || |||| || |||||  ||||||||||| ||| | ||||||| |||||    
T  29740554 ttttcgttagaattattttaattgtctattatgtgtgcttatatgtg-ttttatgtgattatttgtctatgtgtgtattttattcgagattagtggattt 29740652  T
Q  116 ttgctt 121  Q
    | ||||    
T  29740653 tggctt 29740658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 31501975 - 31501934
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  31501975 agaagggtaatttagtcattttagactcaggggtattttggt 31501934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 44866044 - 44866003
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  44866044 agaagggtattttagtcattttagacttaggggtattttggt 44866003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 175
Target Start/End: Original strand, 13451911 - 13451998
Alignment:
Q  87 tgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    ||||||||| ||| ||||||||| |||||| || ||  ||||||||||||||||||||||||  |  ||||||||||| ||| ||||||    
T  13451911 tgtgtattttattagggattagtggattttggcctat-aagggtattttagtcattttagacataagggtattttggtcatttggtgag 13451998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 17816899 - 17816939
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  17816899 gaagggtattttagtcattttagacttaggggtattttggt 17816939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 19050102 - 19050062
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  19050102 gaagggtattttagtcattttagacttaggggtattttggt 19050062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 127230 - 127191
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttg 162  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  127230 agaagggtattttagtcattttagacttaggggtattttg 127191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 15308126 - 15308083
Alignment:
Q  12 ctgattttcgttagaattattttaattaattattatgtgtgttt 55  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||    
T  15308126 ctgattttcgttagatttattttaattaatttttatatgtgttt 15308083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 3060745 - 3060691
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  3060745 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 3060691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 13146612 - 13146570
Alignment:
Q  123 agaagggtattttagtca-ttttagactcagaggtattttggt 164  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  13146612 agaagggtattttagtcatttttagactaagaggtattttggt 13146570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 14419657 - 14419698
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  14419657 agaagggtattttagtcattttggacttaggggtattttggt 14419698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 26069036 - 26069077
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  26069036 agaagggtattttagtcattttggacttaggggtattttggt 26069077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 26069694 - 26069735
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  26069694 agaagggtattttagtcattttggacttaggggtattttggt 26069735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 26093481 - 26093522
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  26093481 agaagggtattttagtcattttggacttaggggtattttggt 26093522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 38424894 - 38424853
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  38424894 agaagggtaatttagtcattttggactcaggggtattttggt 38424853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 45451597 - 45451638
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||||||||  | |||||||||||    
T  45451597 agaagggtattttagtcattttagacttgggggtattttggt 45451638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 12369262 - 12369302
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||| |||| || |||||||||||    
T  12369262 gaagggtattttagtcattttggacttaggggtattttggt 12369302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 16197694 - 16197642
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    ||||||||||||| || | |||||||||| |||||||||||| ||| ||||||    
T  16197694 agaagggtatttttgttactttagactcataggtattttggtcatttggtgag 16197642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 202207 - 202354
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||| |||||||| |||| || ||||| |||||||||||| |||  ||||||||  ||||    
T  202207 ttttcgatagaattattttaattatttattatgtgtatttatatgtgcttgtatgtga-tatttgtctctgtgtgtattttattcaggattagtgaattt 202305  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggt 164  Q
    | ||||||||||||||||||||||||||||| ||||| ||| |||||||    
T  202306 tggcttaagaagggtattttagtcattttaggctcaggggttttttggt 202354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 25380 - 25245
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggatta 107  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||| ||||||| |||||||| |||| ||||||||  ||||||||||| ||  |||||||    
T  25380 caacccgattttcactagaattattttaattatttattatgtgtttttatatgtgcttgtatgtgattaattgtctgtgtgtgtattttatccgggatta 25281  T
Q  108 gtagatttttgcttaagaagggtattttagtcattt 143  Q
    ||||||||| ||||||| ||||||||||||||||||    
T  25280 gtagattttggcttaaggagggtattttagtcattt 25245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 181
Target Start/End: Original strand, 29301 - 29398
Alignment:
Q  85 tgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtca-ttttagactcagaggtattttggttattaggtgagaagggg 181  Q
    ||||||||||| ||||||||||||| || |||||  | ||| |||||||||||||| ||||||||| || ||||||||| | ||| |||||| |||||    
T  29301 tgtgtgtatttaatttgggattagtggagttttgtctcagacgggtattttagtcatttttagactaagtggtattttgatcatttggtgagtagggg 29398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 18829977 - 18830131
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggatta 107  Q
    ||||||| |||||| || |||||||||||||| ||||||||||| ||||||| |||||||| || | |||||||| ||||||||||||  || |||||||    
T  18829977 caacctgtttttcgctataattattttaattatttattatgtgtatttatatgtgcttgtatgtaattaattgtctctgtgtgtatttatttcgggatta 18830076  T
Q  108 gtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttg 162  Q
    || |||||| |||| | || |||||||||||||||||||||| || |||||||||    
T  18830077 gtggattttggcttgaaaatggtattttagtcattttagactgaggggtattttg 18830131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 24625699 - 24625538
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||| ||||||||||||| ||| ||||||| ||||||||||| |||||||| |||| || ||||| |||||||||||| |||  ||||||||   |    
T  24625699 gattttcgctagaattattttatttatttattatatgtgtttatatgtgcttgtatgtgattatttgtctctgtgtgtattttattcaggattagtcatt 24625600  T
Q  114 ttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    ||| ||||| ||||||||||||||||||||||||||||| | || |||||| ||| ||||||    
T  24625599 tttggcttacgaagggtattttagtcattttagactcagggatactttggtcatttggtgag 24625538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 20496156 - 20496303
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||| | |||||||   ||| |||||||| |||| |||| || |||  |||||||| |||    
T  20496156 gattttcgctagaattattttaattaattattatgtgtgtttatttgtgcttgtgtatgattaattgtctctgtatgtactttattcaggattagtggat 20496255  T
Q  114 ttttgcttaagaagggtattttagtcattttagactcagaggtatttt 161  Q
    | | |||||||||||||||||||||||||||||| | || ||||||||    
T  20496256 tatggcttaagaagggtattttagtcattttagatttaggggtatttt 20496303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 162
Target Start/End: Complemental strand, 25281877 - 25281742
Alignment:
Q  27 attattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaa 126  Q
    ||||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||  ||||||||||| ||| | || || || ||||| ||||||||     
T  25281877 attattttaattatttattatgtgtgtttatatgtgcttgtatgtgattaattgtctttgtgtgtattttattcgagaatactaaattttggcttaagag 25281778  T
Q  127 gggtattttagtcattttagactcagaggtattttg 162  Q
      |||||||||||||||||||||||| |||||||||    
T  25281777 ttgtattttagtcattttagactcaggggtattttg 25281742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 208
Target Start/End: Complemental strand, 23543256 - 23543072
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||  ||| ||||||||  | || | |||| ||  |||||||||||||||| |||||    
T  23543256 tagaattattttaattatttattatgtgtgtttatatgtgcttatatatgattaattgtc--tttgagaattttatccgggattagtagattttggctta 23543159  T
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaatta 208  Q
    || | |||||||||||||||||  ||||| ||||| |||||| ||| |||||| ||||  ||||||||||||| |||| || |||||    
T  23543158 aggaaggtattttagtcattttgaactcaaaggtaatttggtcatttggtgagcaaggataaaatagtcttttgattatgataatta 23543072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 15887141 - 15887004
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggatta 107  Q
    ||||||| ||||||| |||||||||||||||| |||||||| ||||||||||   |||||| |||| |||||||| |||||| ||||| ||| || ||||    
T  15887141 caacctgtttttcgtcagaattattttaattatttattatgcgtgtttatatgcacttgtatgtgattaattgtctctgtgtatattttattcggaatta 15887042  T
Q  108 gtagatttttgcttaagaagggtattttagtcatttta 145  Q
     | |||||| |||||| | || ||||||||||||||||    
T  15887041 atggattttggcttaaaatggatattttagtcatttta 15887004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 16090628 - 16090756
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||| ||||||||||||| |||||  |||||   |||| ||||||||  ||||||||||| ||||||||||||| |||||    
T  16090628 ttttcgctagaattattttaattatttattatgtgtgtctatatgcgcttgcgtgtgattaattgtctttgtgtgtattttatttgggattagtggattt 16090727  T
Q  116 ttgcttaagaagggtattttagtcatttt 144  Q
    ||     ||||||||||||||||||||||    
T  16090728 tttacctagaagggtattttagtcatttt 16090756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 14392974 - 14393120
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| |||| |||||||||||| ||||||| ||||||||| | |||||| | |||| |||||||  |||||||||||| | |||||||| || |||||    
T  14392974 ttttcgctagatttattttaattatttattatatgtgtttat-tatgcttgcatgtgattaattgt--ctgtgtgtattttaattgggattggtggattt 14393070  T
Q  116 ttgcttaagaagggtattttagtca-ttttagactcagaggtattttggt 164  Q
    |||    ||||||||||||| |||| ||||||||||||  ||||||||||    
T  14393071 ttggcatagaagggtatttttgtcatttttagactcaggtgtattttggt 14393120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 23539662 - 23539790
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| || |||||||||||||| |||||||||||||||||||  ||||||| |||| || || ||  ||||||||||| ||| |||||||||  ||||    
T  23539662 ttttcgctataattattttaattatttattatgtgtgtttatatgcgcttgtatgtgattatttatctatgtgtgtattttattcgggattagtgaattt 23539761  T
Q  116 ttgcttaagaagggtattttagtcatttt 144  Q
    | |    |||||||||||||||| |||||    
T  23539762 tcgacctagaagggtattttagttatttt 23539790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 18829314 - 18829174
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    ||||||||||||||||| ||| | |||| |||||||| ||||| || |||  || || ||  | ||| |||||   |||||||||||||||||| ||||     
T  18829314 tagaattattttaattatttagtgtgtgcgtttatatgtgcttctatgtggttatttatctttttgtatattttggttgggattagtagattttagcttt 18829215  T
Q  123 agaagggta-ttttagtcattttagactcagaggtattttg 162  Q
    |||||| || ||||||||||||| ||||||| |||||||||    
T  18829214 agaaggatatttttagtcattttggactcagtggtattttg 18829174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 20496295 - 20496378
Alignment:
Q  127 gggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaattat 209  Q
    ||||||||||||||||||||| | || ||||||||||| |||||||||| ||||| |||||| | ||||  ||| |||||||||    
T  20496295 gggtattttagtcattttagatttaggggtattttggtcattaggtgagcaagggtaaaataatattttggttatgagaattat 20496378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 20653452 - 20653506
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  20653452 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 20653506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 24716301 - 24716355
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||| ||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  24716301 agaagagtattttagtcattttagacttaggggtattttggtcattttgtgagaa 24716355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 29760766 - 29760712
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||| |||||||||||||||||||| || ||||||||||| |||  |||||||    
T  29760766 agaaggatattttagtcattttagacttagtggtattttggtcattttgtgagaa 29760712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 23151263 - 23151304
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  23151263 agaagggtaatttagtcattttggactcaggggtattttggt 23151304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 23225584 - 23225629
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttatt 168  Q
    ||||||||| |||||| ||||| ||||||| |||||||||||||||    
T  23225584 agaagggtaatttagttattttggactcaggggtattttggttatt 23225629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 8691 - 8552
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| |||| || | ||| |||||||||||| ||| |||| | || || ||| |||||    
T  8691 tagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattactcgtctctgtgtgtattttattcgggaattgtggaatttggctta 8592  T
Q  123 agaagggtattttagtcattttagactcagaggtattttg 162  Q
    |||| ||||||||||||||||||||||||  |||||||||    
T  8591 agaatggtattttagtcattttagactcaagggtattttg 8552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 78073 - 77915
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||| ||||||||| ||||||||||| ||||||  |||||||| |||| || |||||  ||||||||||| |||  |||||||| |||||    
T  78073 ttttcgctagaattcttttaattatttattatgtgtatttataggtgcttgtatgtgattatttgtctgtgtgtgtattttattctggattagtggattt 77974  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtga 174  Q
    | ||||||||||||||||| |||| |||||||||||  ||||||||||| ||| |||||    
T  77973 tggcttaagaagggtatttcagtcgttttagactcaagggtattttggtcatttggtga 77915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 204099 - 204259
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||||||||||||||||||||| ||||||||||||||||||| || ||||  |||| || || |  || |||||| || ||| ||||||||| |||||    
T  204099 ttttcgttagaattattttaattatttattatgtgtgtttatatatgtttgtgtgtgattatttatatctttgtgtaatttattcgggattagtggattt 204198  T
Q  116 ttgcttaagaagggtattttagtcatttt-agactcagaggtattttggttattaggtgag 175  Q
    |||  | |||| ||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  204199 ttgacttagaatggtattttagtcattttaagactcagaggtattttggtcatttggtgag 204259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 9567399 - 9567234
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcac----tgtgtgtatttcatttgggattagt 109  Q
    |||||||  |||||||||||||||||||||||||||||| |||||| ||  |||| |||| || ||||| |    ||||||||||| ||| |||||||||    
T  9567399 gattttcactagaattattttaattaattattatgtgtggttatatgtgtctgtatgtgattatttgtctctatgtgtgtgtattttattcgggattagt 9567300  T
Q  110 agatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
     |||||| |||||||||||||||||| |||||||||||||||  | ||||||||| ||| ||||||    
T  9567299 ggattttggcttaagaagggtatttttgtcattttagactcaaggatattttggtcatttggtgag 9567234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 28801632 - 28801453
Alignment:
Q  14 gattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||  || ||| ||||| ||||||||||||  || |||||||||  |     
T  28801632 gattttcgctagaattattttaattaattattatgtgtgtttatatgtgcttgtatatg-atatttgtctctgtgtgtattttgttcgggattagtgaac 28801534  T
Q  114 ttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttt 193  Q
    |||  |||||| ||||||||||||||||||| ||||||  ||  ||||| | ||| |||||| ||||| ||||||||||||    
T  28801533 tttgacttaaggagggtattttagtcattttggactcaagggccttttgatcatttggtgagcaagggtaaaatagtcttt 28801453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 21982790 - 21982646
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||||||||||||||||| ||| |||||||||||| |||||| ||||||||  ||| || || ||  ||||||||||| ||||  ||||||| |||||    
T  21982790 ttttcgttagaattattttatttatttattatgtgtgcttatatgtgcttgtatatgattatttatctttgtgtgtattttatttaagattagtggattt 21982691  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattt 160  Q
    |  ||||||||| ||||||||||||||||| |||||  |||||||    
T  21982690 tgacttaagaagagtattttagtcattttaaactcatgggtattt 21982646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 11777045 - 11776908
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| |||||||||||||| || ||||||||||||||||| |          |||| |||||||| |||||||||||| |||   ||||||| |||||    
T  11777045 ttttcgctagaattattttaactatttattatgtgtgtttatgt----------gtgattaattgtctctgtgtgtattttattcatgattagtggattt 11776956  T
Q  116 ttgcttaagaagggtattttagtcattttagactcagaggtattttgg 163  Q
    | |||||||||||||||||| |||||||||||||||  ||||||||||    
T  11776955 tggcttaagaagggtattttggtcattttagactcaagggtattttgg 11776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 16571984 - 16571852
Alignment:
Q  27 attattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaa 126  Q
    |||| |||||||| ||||||||||| ||||||| | || ||| |||| ||||||||  ||| ||||||| ||| |||||||||| ||||| | |||||||    
T  16571984 attaatttaattatttattatgtgtatttatatgtcctcgtatgtgattaattgtctatgtatgtattttattcgggattagtatattttggtttaagaa 16571885  T
Q  127 gggtattttagtca-ttttagactcagaggtat 158  Q
    |||||||||||| | |||||||||||| |||||    
T  16571884 gggtattttagttatttttagactcaggggtat 16571852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 12333982 - 12334102
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    |||| |||||||| ||||||||||||||||||||||| ||  |||  |||| ||||||||  ||||||||||| |||  ||||| ||||| ||| |||||    
T  12333982 tagatttatttta-ttaattattatgtgtgtttatatgtgtctgtttgtgattaattgtctatgtgtgtattttattcaggattggtagagtttggctta 12334080  T
Q  123 agaagggtattttagtcatttt 144  Q
     |||||||||||||||||||||    
T  12334081 tgaagggtattttagtcatttt 12334102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 17867798 - 17867677
Alignment:
Q  89 tgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaata 187  Q
    ||||||| |||  |||||||| |||||| ||||||| || |||| |||||||||||||||| || || |||||||| ||| |||||| ||||  ||||||    
T  17867798 tgtattttattcaggattagtggattttggcttaaggagagtatattagtcattttagacttaggggcattttggtcatttggtgagtaaggataaaata 17867699  T
Q  188 gtcttttaattacgagaattat 209  Q
     ||||||  |||||||||||||    
T  17867698 ctcttttggttacgagaattat 17867677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 9652826 - 9652749
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtattt 95  Q
    ||||||||||| ||||||||||||||| |||  ||||||||||| ||||| || |||| |||||||| ||||||||||||    
T  9652826 ttttcgttagatttattttaattaattttta--tgtgtttatatgtgcttttatgtgactaattgtctctgtgtgtattt 9652749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 15712253 - 15712076
Alignment:
Q  16 ttttcgttagaattattttaattaattatta--tgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagat 113  Q
    |||||||||||||||||||| ||| |||||   | ||||||||||  |||||||  |||| |||||| |  ||||||||||| ||||||||||||| ||     
T  15712253 ttttcgttagaattattttatttatttatttattatgtgtttataagtgcttgtgtgtgattaattgcctttgtgtgtattttatttgggattagtggaa 15712154  T
Q  114 ttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtc 190  Q
    |||||      || ||||||||||||||| || |||||   |||||||||| ||| |||||| ||||| |||||||||    
T  15712153 ttttggcatgtaacggtattttagtcattctacactcaagagtattttggtcatttggtgagcaagggtaaaatagtc 15712076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 6188903 - 6189039
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggatta 107  Q
    ||||||| |||| ||||||||||||||||||| ||||| | ||||||||||| |  || |  ||||||| |||    ||||||||||| |||||||||||    
T  6188903 caacctgtttttagttagaattattttaattatttattgtttgtgtttatatgtatttttgtgtgaatatttgcttttgtgtgtatttgatttgggatta 6189002  T
Q  108 gtagatttttgcttaagaagggtattttagtcatttt 144  Q
    ||  |||||||    ||||| |||||||| |||||||    
T  6189003 gtgaatttttggcctagaagagtattttaatcatttt 6189039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 21958891 - 21958954
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||  ||||||| ||| ||||    
T  21958891 agaagggtattttagtcattttagacttaggggtattttggtcattttgtgagaacgggtaaat 21958954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 53704174 - 53704228
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  53704174 agaagggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 53704228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 12343406 - 12343539
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggatta 107  Q
    ||||| |||||||  |||| |||||||| ||| |||||  |||||||||||| ||  |||  |||| |||||||| ||||||  |||| ||| ||||||     
T  12343406 caacccgattttctctagatttatttta-ttagttattcggtgtgtttatatgtgtctgtttgtgattaattgtctctgtgt--attttattcgggattg 12343502  T
Q  108 gtagatttttgcttaagaagggtattttagtcatttt 144  Q
    ||||| ||| |||||  ||||||||||||||||||||    
T  12343503 gtagagtttggcttatcaagggtattttagtcatttt 12343539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 25118624 - 25118665
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  25118624 agaagggtattttagtcattttagacttaggggtattttggt 25118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 44347648 - 44347595
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||| |||| |||||||||||||| |||  |||||||    
T  44347648 gaagggtattttagtcattttggacttagaggtattttggtcattttgtgagaa 44347595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 54117708 - 54117749
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  54117708 agaagggtattttagtcattttagacttaggggtattttggt 54117749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 6942864 - 6942971
Alignment:
Q  33 ttaattaattattatgtgtgtttatatctgct--tgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggt 130  Q
    ||||||| ||||||||||||||||||| ||||  |||  |||| || ||||| |||| ||||||| ||| | ||||||| ||||||||    ||||||||    
T  6942864 ttaattatttattatgtgtgtttatatgtgcttgtgtgtgtgattatttgtctctgtatgtattttattcgagattagtggatttttggcctagaagggt 6942963  T
Q  131 attttagt 138  Q
    ||||||||    
T  6942964 attttagt 6942971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 122686 - 122647
Alignment:
Q  125 aagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  122686 aagggtattttagtcattttagacttaggggtattttggt 122647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 13722517 - 13722580
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  ||||||| ||| ||||    
T  13722517 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaacgggtaaat 13722580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 45458285 - 45458348
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaat 186  Q
    ||||||||||||||||||||||| ||| || ||||||||||| ||| |||| ||| ||| ||||    
T  45458285 agaagggtattttagtcattttaaacttaggggtattttggtcatttggtgtgaacgggtaaat 45458348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 44056743 - 44056689
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  44056743 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 44056689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 15012730 - 15012771
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||||||||| | |||||||||||    
T  15012730 agaagggtaatttagtcattttagactcgggggtattttggt 15012771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 15045636 - 15045595
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  15045636 agaagggtaatttagtcattttggactcaggggtattttggt 15045595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 15108788 - 15108829
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  15108788 agaagggtaatttagtcattttggactcaggggtattttggt 15108829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 16732998 - 16732945
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  16732998 gaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 16732945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 41255814 - 41255855
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  41255814 agaagggtaatttagtcattttggactcaggggtattttggt 41255855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 34396083 - 34396031
Alignment:
Q  125 aagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  34396083 aagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 34396031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 4042 - 3858
Alignment:
Q  26 aattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaaga 125  Q
    |||| ||||| ||||| ||||||| ||||||| | |||||||| |||| || ||||| || ||||||||| | ||||||||||| |||||| | |||| |    
T  4042 aattgttttatttaatcattatgtttgtttatgtgtgcttgtatgtgattatttgtctctttgtgtattttacttgggattagtggattttagtttaaaa 3943  T
Q  126 agggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtcttttaattacgagaattat 209  Q
    |||||||||||||||||||| |||||  | ||||||||| ||| |||||| ||| | |||||||| |||| ||||||| ||||||    
T  3942 agggtattttagtcattttaaactcaaggatattttggtcatttggtgagcaagtgtaaaatagtattttgattacgaaaattat 3858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 62; Significance: 6e-27; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 370694 - 370822
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||  ||||||| ||||||||||  || || |  |||| |||||||| |||||||||||| ||||||||||||| |||||    
T  370694 ttttcgctagaattattttaattgtttattatatgtgtttatacgtgtttatgtgtgattaattgtccctgtgtgtattttatttgggattagtggattt 370793  T
Q  116 ttgcttaagaagggtattttagtcatttta 145  Q
    | |||||| |||||||||||||||||||||    
T  370794 tggcttaa-aagggtattttagtcatttta 370822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 192937 - 192991
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| |  ||||||||||| |||  |||||||    
T  192937 agaagggtattttagtcattttagacttaagggtattttggtcattttgtgagaa 192991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 20164 - 20014
Alignment:
Q  46 atgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcatttta 145  Q
    |||| ||||||||| |||||||| |||| || |||||  |||| |||||| ||| ||||||||| | |||| |||||| |||||||||||||||||||||    
T  20164 atgtatgtttatatgtgcttgtatgtgattatttgtctttgtgcgtattttattcgggattagtgggttttggcttaaaaagggtattttagtcatttta 20065  T
Q  146 gactcagaggtattttggttattaggtgag--aaggggaaaatagtctttt 194  Q
    | ||||| ||||||||| | ||| ||||||  ||||| |||||||||||||    
T  20064 ggctcaggggtattttgttcatttggtgagaaaagggtaaaatagtctttt 20014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 11869 - 11755
Alignment:
Q  49 tgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcattttagac 148  Q
    |||||||||||||||||  | |||| |||||| |  |||||||||||   |||||||||||||||||  |  | |||||| |||||||||| ||||||||    
T  11869 tgtgtttatatctgcttaaatgtgattaattgcctttgtgtgtattttggttgggattagtagatttcggtgttagaaggctattttagtc-ttttagac 11771  T
Q  149 tcagaggtattttggt 164  Q
    |||  |||||||||||    
T  11770 tcaagggtattttggt 11755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 19897 - 19737
Alignment:
Q  17 tttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttt 116  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| || || |  |||| ||||||||  ||||||||||| ||||||||||||| ||||||    
T  19897 tttcgttagaattattttaattatttattatatgtgtttatatgtgtttatgtgtgattaattgtccatgtgtgtattttatttgggattagtggatttt 19798  T
Q  117 tgcttaagaagggtattttagtca-ttttagactca-gaggtattttggttattaggtgag 175  Q
    ||     ||||||| ||||||||| ||||||||| | | ||||||||||| ||| ||||||    
T  19797 tggccttgaagggtgttttagtcagttttagactaagggggtattttggtcatttggtgag 19737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 54; Significance: 3e-22; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 85655 - 85768
Alignment:
Q  97 atttgggattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaatagtctttta 195  Q
    ||||||||||| | |||||| |||||||||||||| ||||||||||||||||||||  ||| ||| ||||||  ||||| ||||| |||||||||||||     
T  85655 atttgggattaatggattttggcttaagaagggtaatttagtcattttagactcaggtgtaatttagttatttagtgagcaagggaaaaatagtcttttg 85754  T
Q  196 attacgagaattat 209  Q
     |||||||||||||    
T  85755 gttacgagaattat 85768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 27640 - 27763
Alignment:
Q  87 tgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcattttagactcagaggtattttggttattaggtgag-aaggggaaaa 185  Q
    ||||||||| ||| ||||||||| |||||| |||||   | ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||  ||      
T  27640 tgtgtattttattcgggattagtggattttggcttacagacggtattttagtcattttagactcaggggtattttggttatttggtgagaaaggataatg 27739  T
Q  186 tagtcttttaattacgagaattat 209  Q
    |||||||||  |||||||||||||    
T  27740 tagtcttttggttacgagaattat 27763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 85573 - 85621
Alignment:
Q  3 tataccaacctgattttcgttagaattattttaattaattattatgtgt 51  Q
    |||| ||||| |||||||| ||||||||||||||| |||||||||||||    
T  85573 tataacaacccgattttcgctagaattattttaatgaattattatgtgt 85621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 17705 - 17851
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    |||||| ||||||||||||||||| ||||||| |||| ||||||   |||||  |||| || |||||  ||||||||||| | | ||||||||| |||||    
T  17705 ttttcgctagaattattttaattatttattatatgtg-ttatatgcacttgtgtgtgattatttgtctttgtgtgtattttaatcgggattagtggattt 17803  T
Q  116 ttgcttaagaagggtattttagtca-ttttagactcagaggtattttg 162  Q
    |||    ||||| |||||||||||| |||||||||||| |||||||||    
T  17804 ttgacctagaagagtattttagtcatttttagactcaggggtattttg 17851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 14044 - 13915
Alignment:
Q  15 attttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatt 114  Q
    ||||| |||||| ||||||||||| |||||||| | ||||||||| ||||| || |||| |||||| | ||||||||||||   ||||||||| |||| |    
T  14044 atttttgttagatttattttaattcattattatatatgtttatatgtgcttctatgtgattaattgcctctgtgtgtattttggttgggattattagaat 13945  T
Q  115 tttgcttaagaagggtattttagtcatttt 144  Q
    |  |  | | ||||||||||||||||||||    
T  13944 tcggtgttaaaagggtattttagtcatttt 13915  T

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Target: scaffold0331 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 5165 - 5268
Alignment:
Q  8 caacctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggatta 107  Q
    ||||| || |||||||||| ||||||||||| ||  |||||||||||||||| |||||||  |||| |||||| | ||||||||||||   |||||||||    
T  5165 caacccgaatttcgttagatttattttaattcatc-ttatgtgtgtttatatgtgcttgtttgtgattaattgcctctgtgtgtattttggttgggatta 5263  T
Q  108 gtaga 112  Q
    |||||    
T  5264 gtaga 5268  T

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Target: scaffold1539 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 358 - 304
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||  |||||||    
T  358 agaagggtattttagtcattttagacttagaggtattttggtcattttgtgagaa 304  T

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Target: scaffold0772 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 2112 - 2247
Alignment:
Q  16 ttttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagattt 115  Q
    ||||||||| | ||||||| |||| || |||| | ||||||||| ||||| || |||| |||||||| ||||||||||||   |||| |||||| |||||    
T  2112 ttttcgttacatttatttttattattt-ttatatatgtttatatgtgcttatatgtgattaattgtctctgtgtgtattttcgttggcattagtggattt 2210  T
Q  116 ttgcttaagaagggtattttagtcattttagactcag 152  Q
      |  | |||| |||| ||||||||||||||||||||    
T  2211 cggtgttagaatggtaatttagtcattttagactcag 2247  T

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Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 109148 - 109097
Alignment:
Q  17 tttcgttagaattattttaattaattattatgtgtgtttatatctgcttgta 68  Q
    ||||| ||||||||||||||||||||||||| |||||||||||  |||||||    
T  109148 tttcgctagaattattttaattaattattatatgtgtttatatgcgcttgta 109097  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 151238 - 151373
Alignment:
Q  26 aattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaaga 125  Q
    ||||||||||||||||| |||||| ||||||||| || |||||  ||| |||| ||  |||||| || ||   ||||||||||| |||||| |||  |||    
T  151238 aattattttaattaatttttatgtatgtttatatgtgattgtacatgattaatagtttctgtgtttagtttggttgggattagtggattttggctataga 151337  T
Q  126 agggtattttagtcattttagactcagaggtatttt 161  Q
     | | ||||||||||||||  |||||| ||||||||    
T  151338 tgagcattttagtcattttgaactcaggggtatttt 151373  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 70043 - 70097
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  70043 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 70097  T

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Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 79308 - 79362
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  79308 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 79362  T

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Target: scaffold0672 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 4876 - 5018
Alignment:
Q  23 tagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgctta 122  Q
    ||||||||||||||||| ||||||| |||||| |||| ||  |    |||  || |||||||||||| ||||| |||  |||||||| ||||||||        
T  4876 tagaattattttaattatttattatatgtgttcatatgtgtctaggtgtgcttatttgtcactgtgtatattttattccggattagtggatttttggcct 4975  T
Q  123 agaagggtattttagtca-ttttagactcagaggtattttggt 164  Q
    |||| ||||||||||||| ||||||||| || |||||||||||    
T  4976 agaaaggtattttagtcatttttagactaaggggtattttggt 5018  T

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Target: scaffold0162 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 12533 - 12479
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  12533 agaagggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 12479  T

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Target: scaffold0162; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 25883 - 25923
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttgg 163  Q
    ||||||||||||||||||||||||||| || | ||||||||    
T  25883 agaagggtattttagtcattttagacttagggatattttgg 25923  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 127644 - 127698
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| || ||||||||||| |||  |||||||    
T  127644 agaagggtattttagtcattttagacttaggggtattttggtcattttgtgagaa 127698  T

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Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 35737 - 35696
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  35737 agaagggtattttagtcatttttgacttaggggtattttggt 35696  T

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Target: scaffold0447 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 5382 - 5329
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||| |||| || ||||||||||| ||| ||||||||    
T  5382 gaagggtattttagtcattttggacttaggggtattttggtcatttggtgagaa 5329  T

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Target: scaffold0447; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 9996 - 9943
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  9996 gaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 9943  T

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Target: scaffold0383 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 7991 - 7938
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||| |||| || ||||||||||| ||| ||||||||    
T  7991 gaagggtattttagtcattttggacttaggggtattttggtcatttggtgagaa 7938  T

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Target: scaffold0086 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 9143 - 9203
Alignment:
Q  85 tgtgtgtatttcatttgggattagtagattttt-gcttaagaagggtattttagtcatttta 145  Q
    ||||||||||| ||||| ||||||||||||||| || ||| |||||||||||||||||||||    
T  9143 tgtgtgtatttaatttgagattagtagatttttagcctaa-aagggtattttagtcatttta 9203  T

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Target: scaffold0106 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 48971 - 49011
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  48971 gaagggtattttagtcattttagacttaggggtattttggt 49011  T

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Target: scaffold1518 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1518
Description:

Target: scaffold1518; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 965 - 870
Alignment:
Q  54 ttatatctgcttgtaagtgaataattgtcactgtgtgtatttcatttgggattagtagatttttgcttaagaagggtattttagtcattttagact 149  Q
    |||||| |||||||| | ||||||||| |  |||||||||||   ||||||||| |||| ||  |  | |||||||||||||||||||||||||||    
T  965 ttatatgtgcttgtatgcgaataattgcctatgtgtgtattttggttgggattattagaattcggtgttagaagggtattttagtcattttagact 870  T

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Target: scaffold0205 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 8822 - 8755
Alignment:
Q  11 cctgattttcgttagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataat 78  Q
    ||||||||||| |||| ||||||| |||  ||||||||||||||||| | |||||||| |||| ||||    
T  8822 cctgattttcgctagatttatttttatttgttattatgtgtgtttatttatgcttgtatgtgattaat 8755  T

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Target: scaffold0537 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 722 - 668
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||| | || ||||||||||| |||  |||||||    
T  722 agaagggtattttagtcattttagatttaggggtattttggtcattttgtgagaa 668  T

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Target: scaffold0498 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 9674 - 9620
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||||| || ||||||| ||| |||  |||||||    
T  9674 agaagggtattttagtcattttagacttagtggtatttaggtcattttgtgagaa 9620  T

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Target: scaffold0413 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 5581 - 5635
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  5581 agaagggtattttagtcattttcgacttaggggtattttggtcattttgtgagaa 5635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 12909 - 12855
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| ||||||| | ||||||||| |||  |||||||    
T  12909 agaagggtattttagtcattttggactcagggttattttggtcattttgtgagaa 12855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 30910 - 30856
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||| | || ||||||||||| |||  |||||||    
T  30910 agaagggtattttagtcattttagatttaggggtattttggtcattttgtgagaa 30856  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 39128 - 39074
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  39128 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 39074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 97641 - 97587
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  97641 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 97587  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 41487 - 41433
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  41487 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 41433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 46994 - 46940
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  46994 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 46940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 122630 - 122684
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  122630 agaagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 122684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 4610 - 4517
Alignment:
Q  86 gtgtgtatttcatttgg-gattagtagatttttgcttaagaagggtattttagtcatttta-gactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||| |||| | ||||||| |||||| ||||| | ||||||||||||||||||||  |||||  ||||||||||| |||  |||||||    
T  4610 gtgtgtattttattttgagattagtggattttggcttacggagggtattttagtcattttataactcaacggtattttggtcattttgtgagaa 4517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 424 - 465
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  424 agaagggtaatttagtcattttggactcaggggtattttggt 465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 9814 - 9773
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  9814 agaagggtattttagtcattttggacttaggggtattttggt 9773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 5842 - 5895
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  5842 gaagggtattttagtcattttggacttaggggtattttggtcatttcgtgagaa 5895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 5521 - 5480
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  5521 agaagggtattttagtcattttagacttaagggtattttggt 5480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 813 - 772
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  813 agaagggtattttagtcattttggacttaggggtattttggt 772  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 21831 - 21872
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  21831 agaagggtaatttagtcattttggactcaggggtattttggt 21872  T

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Target: scaffold0132 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 43164 - 43123
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||||||||| |  |||||||||||    
T  43164 agaagggtattttagtcattttagacttaagggtattttggt 43123  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 22326 - 22285
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  22326 agaagggtattttagtcattttggacttaggggtattttggt 22285  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 36543 - 36584
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  36543 agaagggtattttagtcattttggacttaggggtattttggt 36584  T

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Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 42126 - 42074
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    |||||||||||||||||||||| |||| |  ||||||||||| ||| ||||||    
T  42126 agaagggtattttagtcattttggacttaagggtattttggtcatttggtgag 42074  T

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Target: scaffold0077 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 36386 - 36427
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  36386 agaagggtattttagtcattttggacttaggggtattttggt 36427  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 89307 - 89348
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| |||||||||||| ||||||| |||||||||||    
T  89307 agaagggtaatttagtcattttggactcaggggtattttggt 89348  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 86312 - 86271
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||| ||||||| |||||||||||| |||||||||||    
T  86312 agaagggtaatttagtccttttagactcaggggtattttggt 86271  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 246911 - 246952
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||||| ||| || |||||||||||    
T  246911 agaagggtattttagtcattttatacttaggggtattttggt 246952  T

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Target: scaffold0416 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 6447 - 6395
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    |||||||||||||||||||||| |||| |  ||||||||||| ||| ||||||    
T  6447 agaagggtattttagtcattttggacttaagggtattttggtcatttggtgag 6395  T

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Target: scaffold0359 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 2130 - 2090
Alignment:
Q  124 gaagggtattttagtcattttagactcagaggtattttggt 164  Q
    ||||||||||||||||||||| |||| || |||||||||||    
T  2130 gaagggtattttagtcattttggacttaggggtattttggt 2090  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 16850 - 16902
Alignment:
Q  125 aagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    ||||||||||||||||||||||||| |  ||||||||||| |||  |||||||    
T  16850 aagggtattttagtcattttagacttaagggtattttggtcattttgtgagaa 16902  T

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Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 30718 - 30770
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgag 175  Q
    |||||||||||||||||||||| |||| |  ||||||||||| ||| ||||||    
T  30718 agaagggtattttagtcattttggacttaagggtattttggtcatttggtgag 30770  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 34482 - 34418
Alignment:
Q  123 agaagggtattttagtcattttagactcagaggtattttggttattaggtgagaaggggaaaata 187  Q
    |||||||||||||||||||||| ||||  | ||||||||||| |||  ||||||| ||| |||||    
T  34482 agaagggtattttagtcattttggacttgggggtattttggtcattttgtgagaacgggtaaata 34418  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 131673 - 131725
Alignment:
Q  125 aagggtattttagtcattttagactcagaggtattttggttattaggtgagaa 177  Q
    |||||||||||||||||||| |||| || ||||||||||| |||  |||||||    
T  131673 aagggtattttagtcattttggacttaggggtattttggtcattttgtgagaa 131725  T

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