View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5597-Insertion-4 (Length: 400)

Name: NF5597-Insertion-4
Description: NF5597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5597-Insertion-4
NF5597-Insertion-4
[»] chr6 (11 HSPs)
chr6 (7-400)||(14278111-14278511)
chr6 (7-312)||(14283685-14283989)
chr6 (7-219)||(14258459-14258671)
chr6 (253-326)||(14258375-14258448)
chr6 (347-399)||(28363960-28364012)
chr6 (347-386)||(12188317-12188356)
chr6 (365-400)||(20863416-20863451)
chr6 (347-397)||(31622994-31623044)
chr6 (347-388)||(10338186-10338227)
chr6 (347-388)||(33549127-33549168)
chr6 (364-400)||(14199947-14199983)
[»] scaffold1030 (1 HSPs)
scaffold1030 (7-319)||(2979-3291)
[»] chr7 (22 HSPs)
chr7 (7-213)||(35138564-35138770)
chr7 (7-219)||(35131250-35131462)
chr7 (140-207)||(35123179-35123246)
chr7 (327-388)||(21854550-21854612)
chr7 (347-388)||(26459422-26459463)
chr7 (325-399)||(5273591-5273666)
chr7 (349-388)||(17041024-17041063)
chr7 (322-400)||(18363693-18363772)
chr7 (347-388)||(3280497-3280538)
chr7 (347-388)||(22760886-22760927)
chr7 (347-388)||(25021347-25021388)
chr7 (347-388)||(25590634-25590675)
chr7 (347-388)||(29785313-29785354)
chr7 (347-388)||(30442511-30442552)
chr7 (347-400)||(31706448-31706501)
chr7 (347-388)||(43215207-43215248)
chr7 (347-380)||(48771961-48771994)
chr7 (347-391)||(19553477-19553520)
chr7 (348-388)||(23552142-23552182)
chr7 (348-388)||(26703149-26703189)
chr7 (348-388)||(37233584-37233624)
chr7 (322-385)||(42836016-42836080)
[»] chr3 (27 HSPs)
chr3 (325-400)||(31520605-31520681)
chr3 (347-400)||(4222164-4222217)
chr3 (347-400)||(46518651-46518704)
chr3 (347-391)||(7975441-7975485)
chr3 (348-399)||(31788971-31789022)
chr3 (350-400)||(31608524-31608574)
chr3 (347-388)||(30311329-30311370)
chr3 (347-400)||(32651438-32651491)
chr3 (348-400)||(11090165-11090217)
chr3 (347-391)||(28531067-28531111)
chr3 (164-203)||(12404067-12404106)
chr3 (350-400)||(44069784-44069834)
chr3 (347-381)||(51903897-51903931)
chr3 (347-388)||(2667885-2667926)
chr3 (347-388)||(4844523-4844564)
chr3 (347-388)||(4870219-4870260)
chr3 (347-388)||(14339633-14339674)
chr3 (347-388)||(15048073-15048114)
chr3 (347-400)||(21960574-21960627)
chr3 (347-400)||(27093361-27093414)
chr3 (351-388)||(44743867-44743904)
chr3 (347-388)||(47279416-47279457)
chr3 (364-400)||(3427553-3427589)
chr3 (364-400)||(17108898-17108934)
chr3 (348-400)||(27259185-27259237)
chr3 (348-388)||(28703416-28703456)
chr3 (347-383)||(28928896-28928932)
[»] chr5 (14 HSPs)
chr5 (347-400)||(14495805-14495858)
chr5 (324-381)||(29075780-29075838)
chr5 (351-388)||(84851-84888)
chr5 (347-400)||(87423-87476)
chr5 (347-388)||(30883210-30883251)
chr5 (347-400)||(34984829-34984882)
chr5 (346-400)||(17028264-17028318)
chr5 (347-388)||(16457833-16457874)
chr5 (347-400)||(27596350-27596403)
chr5 (347-388)||(29692398-29692439)
chr5 (347-388)||(43442219-43442260)
chr5 (347-391)||(18596010-18596054)
chr5 (364-400)||(39327090-39327126)
chr5 (348-400)||(41165629-41165681)
[»] chr4 (14 HSPs)
chr4 (347-388)||(38869791-38869832)
chr4 (349-400)||(37274459-37274510)
chr4 (347-400)||(31759658-31759711)
chr4 (347-388)||(37109363-37109404)
chr4 (347-400)||(53496900-53496953)
chr4 (348-400)||(5450117-5450169)
chr4 (348-388)||(23377980-23378020)
chr4 (325-384)||(51250538-51250598)
chr4 (325-387)||(37720227-37720290)
chr4 (323-388)||(9241037-9241103)
chr4 (347-400)||(4249200-4249253)
chr4 (347-388)||(7949466-7949507)
chr4 (324-388)||(19238589-19238654)
chr4 (351-388)||(39509097-39509134)
[»] chr2 (11 HSPs)
chr2 (347-400)||(1729839-1729892)
chr2 (347-400)||(16918578-16918631)
chr2 (347-400)||(42602577-42602630)
chr2 (347-388)||(42327407-42327448)
chr2 (325-388)||(37480075-37480139)
chr2 (323-387)||(4438992-4439057)
chr2 (347-400)||(11251110-11251163)
chr2 (347-388)||(12086141-12086182)
chr2 (347-388)||(29503294-29503335)
chr2 (347-400)||(34041588-34041641)
chr2 (348-388)||(4262314-4262354)
[»] chr1 (20 HSPs)
chr1 (347-388)||(15786332-15786373)
chr1 (325-400)||(41508831-41508907)
chr1 (347-386)||(8177196-8177235)
chr1 (347-386)||(44046162-44046201)
chr1 (347-388)||(6650618-6650659)
chr1 (347-400)||(10526846-10526899)
chr1 (347-388)||(33700785-33700826)
chr1 (328-399)||(9964441-9964513)
chr1 (325-388)||(19528339-19528403)
chr1 (325-388)||(51814494-51814558)
chr1 (347-394)||(9643815-9643862)
chr1 (349-400)||(18459231-18459282)
chr1 (323-388)||(9165207-9165273)
chr1 (347-388)||(2799885-2799926)
chr1 (347-400)||(21267993-21268046)
chr1 (347-388)||(31794276-31794317)
chr1 (347-388)||(36371493-36371534)
chr1 (347-380)||(52336794-52336827)
chr1 (325-388)||(40257399-40257463)
chr1 (347-383)||(51703802-51703838)
[»] scaffold0299 (1 HSPs)
scaffold0299 (347-388)||(11551-11592)
[»] scaffold0194 (1 HSPs)
scaffold0194 (347-388)||(13058-13099)
[»] chr8 (20 HSPs)
chr8 (347-388)||(2203515-2203556)
chr8 (365-400)||(11793521-11793556)
chr8 (349-400)||(44780114-44780165)
chr8 (347-388)||(968385-968426)
chr8 (347-388)||(3305200-3305241)
chr8 (350-391)||(3524410-3524451)
chr8 (347-388)||(3624603-3624644)
chr8 (347-388)||(6536543-6536584)
chr8 (347-400)||(7140732-7140785)
chr8 (347-400)||(11492073-11492126)
chr8 (347-388)||(16852363-16852404)
chr8 (347-388)||(19703499-19703540)
chr8 (347-388)||(23361661-23361702)
chr8 (347-388)||(28783083-28783124)
chr8 (347-388)||(29858061-29858102)
chr8 (347-388)||(35690076-35690117)
chr8 (328-388)||(36205198-36205259)
chr8 (348-380)||(6569791-6569823)
chr8 (364-400)||(22193364-22193400)
chr8 (325-388)||(26688865-26688929)
[»] scaffold0291 (1 HSPs)
scaffold0291 (347-388)||(2482-2523)
[»] scaffold0258 (1 HSPs)
scaffold0258 (347-388)||(15335-15376)
[»] scaffold0122 (1 HSPs)
scaffold0122 (347-388)||(6931-6972)
[»] scaffold0002 (1 HSPs)
scaffold0002 (347-388)||(94983-95024)
[»] scaffold0417 (1 HSPs)
scaffold0417 (325-400)||(10219-10295)
[»] scaffold0021 (1 HSPs)
scaffold0021 (347-387)||(157000-157040)
[»] scaffold0004 (1 HSPs)
scaffold0004 (348-400)||(81564-81616)


Alignment Details
Target: chr6 (Bit Score: 323; Significance: 0; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 7 - 400
Target Start/End: Complemental strand, 14278511 - 14278111
Alignment:
Q  7 aaatataaggaactattagtggatcaaaatctgagtgaaccatttggaactattagtggtgattctccatctcaacgccttcattcttatttgaaaatca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14278511 aaatataaggaactattagtggatcaaaatctgagtgaaccatttggaactattagtggtgattctccatctcaacgccttcattcttatttgaaaatca 14278412  T
Q  107 atagaaccttgattggtttgattaaaaatcactcaaaaatggctttgtatatcttccttgagactggtcgcttctggtttcctgctcaagtctataaggt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  14278411 atagaaccttgattggtttgattaaaaatcactcaaaaatggctttgtatatcctccttgagactggtcgcttctggtttcctgctcaagtttataaggt 14278312  T
Q  207 atgattagcaatac-------tgctaatgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatggattccatcctaag 299  Q
    ||||||||||||||       | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14278311 atgattagcaatactactaaatactaatgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatggattccatcctaag 14278212  T
Q  300 taagaataactaccaagtatttaataacccacatgggtttgcctgatgtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgatt 399  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| | ||||||| ||||||||| ||||||| || |||||||    
T  14278211 taagaataactacaaagtatttaataacccacatgggttggcctggtgtattggctttggacctgggagtgcgctcctccttaaggtctcaggtttgatt 14278112  T
Q  400 c 400  Q
    |    
T  14278111 c 14278111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 7 - 312
Target Start/End: Complemental strand, 14283989 - 14283685
Alignment:
Q  7 aaatataaggaactattagtggatcaaaatctgagtgaaccatttggaactattagtggtgattctccatctcaacgccttcattcttatttgaaaatca 106  Q
    |||||||| | ||||||||||||||| ||| ||||   | | | |||||||||||||||||||||    | || ||||| |||||||||||| |||| ||    
T  14283989 aaatataaaggactattagtggatcagaatttgaggagatcttctggaactattagtggtgattccttttttcgacgccatcattcttatttaaaaagca 14283890  T
Q  107 atagaaccttgattggtttgattaaaaatcactcaaaaatggctttgtatatcttccttgagactggtcgcttctggtttcctgctcaagtctataaggt 206  Q
    ||||| ||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||||| || ||||||| |||||||||||||| ||||||||    
T  14283889 atagatccttgattgcttttattaaaaatcattcaaaa-tggctttgtatattttccttgagactagttgcttctgctttcctgctcaagtttataaggt 14283791  T
Q  207 atgattagcaat-actgctaatgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatggattccatcctaagtaagaa 305  Q
    ||||||| | || ||| | || |||||||||||||| ||||| || ||||||||||| |||||||||||| || ||| |||||| ||||||||||||| |    
T  14283790 atgattatccataactaccaa-gtatttcttttgtacttctactacctagtaagaataaagtgatgcttactaaattgtggattgcatcctaagtaagta 14283692  T
Q  306 taactac 312  Q
     ||||||    
T  14283691 gaactac 14283685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 14258671 - 14258459
Alignment:
Q  7 aaatataaggaactattagtggatcaaaatctgagtgaaccatttggaactattagtggtgattctccatctcaacgccttcattcttatttgaaaatca 106  Q
    |||||||| | |||||||||||| || ||| |||||  | ||| ||||||||||||||  ||||||   | || ||||| ||||||||||||||||| ||    
T  14258671 aaatataaaggactattagtggagcataatttgagtagatcatgtggaactattagtgacgattctttctttcgacgccatcattcttatttgaaaagca 14258572  T
Q  107 atagaaccttgattggtttgattaaaaatcactcaaaaatggctttgtatatcttccttgagactggtcgcttctggtttcctgctcaagtctataaggt 206  Q
    ||||| ||||||||  ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |    
T  14258571 atagatccttgatttctttgattaaaaatcattcaaaaatgcctttgtatattttccttgagactggtcgcttctggtttcctgctcaagtttataagct 14258472  T
Q  207 atgattagcaata 219  Q
    ||||||| |||||    
T  14258471 atgattatcaata 14258459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 326
Target Start/End: Complemental strand, 14258448 - 14258375
Alignment:
Q  253 tagtaagaatgaagtgatgcttattacattatggattccatcctaagtaagaataactaccaagtatttaataa 326  Q
    |||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||| | |||||||||||    
T  14258448 tagtaagaataaagtgatgcttattaaattgtggattgcatcctaagtaagaataactactatgtatttaataa 14258375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 28363960 - 28364012
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgatt 399  Q
    ||||||| |||||||| | ||||||||||||||||||||||| ||||| ||||    
T  28363960 gtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgatt 28364012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 12188356 - 12188317
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggt 386  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  12188356 gtattggcttgggacctgggagtgtgctcctcctcaaggt 12188317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 365 - 400
Target Start/End: Original strand, 20863416 - 20863451
Alignment:
Q  365 ggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||||||||||||| |||||||||||    
T  20863416 ggagtgtgctcctcctcaaggtctcagatttgattc 20863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 397
Target Start/End: Complemental strand, 31623044 - 31622994
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttga 397  Q
    |||||||||||||| | |||||||||||||||||| |||||| || |||||    
T  31623044 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttga 31622994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 10338227 - 10338186
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  10338227 gtattggcttgggacctaggagtgtgctcctcctcaaggtct 10338186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 33549127 - 33549168
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||| ||||||    
T  33549127 gtattggcttgggacctgggagtgtgctcctcctcgaggtct 33549168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 14199983 - 14199947
Alignment:
Q  364 gggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  14199983 gggagtgtgctcctcctcaaggtctcagattcgattc 14199947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1030 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: scaffold1030
Description:

Target: scaffold1030; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 7 - 319
Target Start/End: Original strand, 2979 - 3291
Alignment:
Q  7 aaatataaggaactattagtggatcaaaatctgagtgaaccatttggaactattagtggtgattctccatctcaacgccttcattcttatttgaaaatca 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2979 aaatgtaaggaactattagtggatcaaaatctgagtgaaccatttggaactattagtggtgattctccatctcaacgccttcattcttatttgaaaatca 3078  T
Q  107 atagaaccttgattggtttgattaaaaatcactcaaaaatggctttgtatatcttccttgagactggtcgcttctggtttcctgctcaagtctataaggt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3079 atagaaccttgattggtttgattaaaaatcactcaaaaatggctttgtatatcttccttgagactggtcgcttctggtttcctgctcaagtttataaggt 3178  T
Q  207 atgattagcaatactgctaatgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatggattccatcctaagtaagaat 306  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3179 atgattagcaatactactaatgtatttcttttgtatttctaatagctagtaagaatgaagtgatgcttattacattatggattccatcctaagtaagaat 3278  T
Q  307 aactaccaagtat 319  Q
    |||||| ||||||    
T  3279 aactacaaagtat 3291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 3e-58; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 35138770 - 35138564
Alignment:
Q  7 aaatataaggaactattagtggatcaaaatctgagtgaaccatttggaactattagtggtgattctccatctcaacgccttcattcttatttgaaaatca 106  Q
    |||||||||||||||||||||||||| |||||||||||  |||| ||||||| ||||||| ||||| ||| ||||||  ||||||||||||||| |||||    
T  35138770 aaatataaggaactattagtggatcagaatctgagtgactcattaggaactactagtggtaattcttcatttcaacgaattcattcttatttgagaatca 35138671  T
Q  107 atagaaccttgattggtttgattaaaaatcactcaaaaatggctttgtatatcttccttgagactggtcgcttctggtttcctgctcaagtctataaggt 206  Q
    ||||| || ||| || ||||||||||||||| |||||||||||| | ||||| || ||||||||||| || |||||||||||||||||||| ||||||||    
T  35138670 atagatccatgactgatttgattaaaaatcattcaaaaatggctctatatatttttcttgagactggccgtttctggtttcctgctcaagtttataaggt 35138571  T
Q  207 atgatta 213  Q
    |||||||    
T  35138570 atgatta 35138564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 7 - 219
Target Start/End: Complemental strand, 35131462 - 35131250
Alignment:
Q  7 aaatataaggaactattagtggatcaaaatctgagtgaaccatttggaactattagtggtgattctccatctcaacgccttcattcttatttgaaaatca 106  Q
    |||||||||||||||||||||||||  |||||||| ||  |||| ||||||| ||||||| ||||| ||| ||||||  ||||||||||||||| |||||    
T  35131462 aaatataaggaactattagtggatcggaatctgagcgactcattaggaactactagtggtaattcttcatttcaacgaattcattcttatttgagaatca 35131363  T
Q  107 atagaaccttgattggtttgattaaaaatcactcaaaaatggctttgtatatcttccttgagactggtcgcttctggtttcctgctcaagtctataaggt 206  Q
    ||||| || ||| || ||||||||||||||| |||||||||||| | ||||| || ||||||||||| || |||||||||||||||||||| ||||||||    
T  35131362 atagatccatgactgatttgattaaaaatcattcaaaaatggctctatatatttttcttgagactggccgtttctggtttcctgctcaagtttataaggt 35131263  T
Q  207 atgattagcaata 219  Q
    ||||||| |||||    
T  35131262 atgattaacaata 35131250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 35123246 - 35123179
Alignment:
Q  140 caaaaatggctttgtatatcttccttgagactggtcgcttctggtttcctgctcaagtctataaggta 207  Q
    ||||||||  ||||| ||||  ||||||||||||||  |||||||||||||||||||| |||||||||    
T  35123246 caaaaatgagtttgtttatcgcccttgagactggtcaattctggtttcctgctcaagtttataaggta 35123179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 21854550 - 21854612
Alignment:
Q  327 cccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||| |||||| |||||||| |||||||| |||||| |||||||||||||||||||| ||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcctcaaagtct 21854612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 26459463 - 26459422
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  26459463 gtattggcttgggacctgggagtgtgctcctcctcaaggtct 26459422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 5273666 - 5273591
Alignment:
Q  325 aacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgatt 399  Q
    ||||||| |||||| ||||| || | ||||||||||| |   |||||||||||||||||||||||||| |||||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgatt 5273591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 388
Target Start/End: Complemental strand, 17041063 - 17041024
Alignment:
Q  349 attggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  17041063 attggcttgggatctggaagtgtgctcctcctcaaggtct 17041024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 400
Target Start/End: Original strand, 18363693 - 18363772
Alignment:
Q  322 aataacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||| |||||| ||||  || ||| |||||| |||  ||||||||||||||||||||||||| || ||||||||    
T  18363693 aataacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattc 18363772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 3280538 - 3280497
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  3280538 gtattggcttgggacccgagagtgtgctcctcctcaaggtct 3280497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 22760886 - 22760927
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||| ||||||| | |||||||||||||||||||||||||    
T  22760886 gtattgacttgggacctgggagtgtgctcctcctcaaggtct 22760927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 25021388 - 25021347
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||||| ||||    
T  25021388 gtattggcttgggacctgggagtgtgctcctcctcaaagtct 25021347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 25590634 - 25590675
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||| |||| |||||||||||||||||| ||||||    
T  25590634 gtattggcttgagatctgggagtgtgctcctcctcgaggtct 25590675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 29785354 - 29785313
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||| ||||||||||| || ||||||||||||||||||||||    
T  29785354 gtataggcttgggatctggaagtgtgctcctcctcaaggtct 29785313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 30442511 - 30442552
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||| ||||||||||||||||||    
T  30442511 gtattggcttgggacctgggagtttgctcctcctcaaggtct 30442552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 31706448 - 31706501
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||| |||||| | |||||||||||| || ||||||||||||| |||||||    
T  31706448 gtattggtttgggacctgggagtgtgctcatcgtcaaggtcttagacttgattc 31706501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 43215207 - 43215248
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  43215207 gtattggcttgggacctcggagtgtgctcctcctcaaggtct 43215248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Original strand, 48771961 - 48771994
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcct 380  Q
    |||||||||||||||| |||||||||||||||||    
T  48771961 gtattggcttgggatctgggagtgtgctcctcct 48771994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 19553477 - 19553520
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttag 391  Q
    |||||||||||| | | ||||||||||||||||||||||||||||    
T  19553477 gtattggcttgg-acctgggagtgtgctcctcctcaaggtcttag 19553520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 23552142 - 23552182
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||| ||||||| | |||||||||||||||||||||||||    
T  23552142 tattgacttgggacctgggagtgtgctcctcctcaaggtct 23552182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 26703149 - 26703189
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||||||| |||||||||||||| ||| ||||||    
T  26703149 tattggcttgggatctgggagtgtgctccttctcgaggtct 26703189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 37233624 - 37233584
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||||||  ||||||||||||||||| |||||||    
T  37233624 tattggcttgggatgtgggagtgtgctcctccttaaggtct 37233584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 42836080 - 42836016
Alignment:
Q  322 aataacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaagg 385  Q
    |||||||||| |||||| ||||  || ||||||||||||| | |||||||||||| |||||||||    
T  42836080 aataacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaagg 42836016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 31520681 - 31520605
Alignment:
Q  325 aacccacatgggtttgcctgatgt-attggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||| |||||| ||||| ||  |||||||||||||| |||||||||||||||||| ||||||||| ||||||||    
T  31520681 aacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattc 31520605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 4222164 - 4222217
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| || |||||    
T  4222164 gtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattc 4222217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 46518651 - 46518704
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||||| ||||||||||||||||||||||| | || ||||||||    
T  46518651 gtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattc 46518704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 7975441 - 7975485
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttag 391  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||    
T  7975441 gtataggcttgggatctgggagtgtgctcctcctcaaggtcttag 7975485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 31789022 - 31788971
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgatt 399  Q
    ||||||||||||||| |||||||||||||||||| |||| |||| |||||||    
T  31789022 tattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgatt 31788971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 400
Target Start/End: Complemental strand, 31608574 - 31608524
Alignment:
Q  350 ttggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||| |||| |||||||||||||||||| |||||| |||||||||||    
T  31608574 ttggcttgagatctgggagtgtgctcctcctcgaggtctcagatttgattc 31608524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 30311329 - 30311370
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  30311329 gtataggcttgggatctgggagtgtgctcctcctcaaggtct 30311370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 32651491 - 32651438
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||| | ||||||||||||||||||||| ||| ||||| |||||    
T  32651491 gtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattc 32651438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 400
Target Start/End: Complemental strand, 11090217 - 11090165
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||| || |||||    
T  11090217 tattggcttgggatctgggaatgtgctcctcctcgaggtcttagtttcgattc 11090165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 28531111 - 28531067
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttag 391  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtcttag 28531067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 12404067 - 12404106
Alignment:
Q  164 ttgagactggtcgcttctggtttcctgctcaagtctataa 203  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  12404067 ttgaaactggccgcttctggtttcctgctcaagtctataa 12404106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 400
Target Start/End: Original strand, 44069784 - 44069834
Alignment:
Q  350 ttggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||| ||||  |||||||||||||||||||||||| || ||||||||    
T  44069784 ttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtttgattc 44069834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 51903931 - 51903897
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctc 381  Q
    |||||||||||||||| ||||||||||||||||||    
T  51903931 gtattggcttgggatctgggagtgtgctcctcctc 51903897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 2667885 - 2667926
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||||| |||||||||||| ||||| ||||||    
T  2667885 gtattggcttgggatctgggagtgtgctcttcctcgaggtct 2667926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 4844564 - 4844523
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||| ||||||||| |||||||||||||||||| ||||||    
T  4844564 gtattgacttgggatctgggagtgtgctcctcctcgaggtct 4844523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 4870260 - 4870219
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||| ||||||||| |||||||||||||||||| ||||||    
T  4870260 gtattgacttgggatctgggagtgtgctcctcctcgaggtct 4870219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 14339633 - 14339674
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||||  |||||||||||||||||||| ||||    
T  14339633 gtattggcttgggatttgggagtgtgctcctcctcaatgtct 14339674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 15048114 - 15048073
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||| ||||||||||| |||| ||||||||||||||||||||    
T  15048114 gtataggcttgggatctgggaatgtgctcctcctcaaggtct 15048073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 21960574 - 21960627
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||| | | |||||||||||||||| |||||| ||||| |||||    
T  21960574 gtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattc 21960627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 27093414 - 27093361
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||| |   ||||||||||||||||||||||||| || ||||||||    
T  27093414 gtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattc 27093361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 388
Target Start/End: Complemental strand, 44743904 - 44743867
Alignment:
Q  351 tggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtct 44743867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 47279457 - 47279416
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||| |||||||||| ||||||||||||||||| |||||||    
T  47279457 gtatttgcttgggatctgggagtgtgctcctccttaaggtct 47279416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 3427589 - 3427553
Alignment:
Q  364 gggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  3427589 gggagtgtgctcctcctcaaggtctcagattcgattc 3427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 17108934 - 17108898
Alignment:
Q  364 gggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||||||||||||||| || ||||||||    
T  17108934 gggagtgtgctcctcctcaaggtctcaggtttgattc 17108898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 27259185 - 27259237
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||| | |||||||||||||||||| |||| | || ||||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattc 27259237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 28703456 - 28703416
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||| |||||||||| ||||||||||||||| |||||||||    
T  28703456 tattagcttgggatctgggagtgtgctcctcttcaaggtct 28703416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 28928932 - 28928896
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaa 383  Q
    |||||||||||||||| | ||||||||||||||||||    
T  28928932 gtattggcttgggatctgagagtgtgctcctcctcaa 28928896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 14495858 - 14495805
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||| ||||||||| |||||||||||||||||| |||||| |||||||||||    
T  14495858 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattc 14495805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 29075780 - 29075838
Alignment:
Q  324 taacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctc 381  Q
    |||||||| |||||||||||  || ||||||||||||||| ||||||||||||||||||    
T  29075780 taacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctc 29075838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 84851 - 84888
Alignment:
Q  351 tggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||| |||||||||||||||||||||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtct 84888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 87476 - 87423
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||| ||||| ||| ||||||||||||||||||||||||| || ||||||||    
T  87476 gtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgattc 87423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 30883251 - 30883210
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  30883251 gtattggcttgggacctgggagtgtgctcctcctcaaggtct 30883210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 34984829 - 34984882
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||| | | |||||||||||||||||||||||||||| || |||||    
T  34984829 gtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattc 34984882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 400
Target Start/End: Complemental strand, 17028318 - 17028264
Alignment:
Q  346 tgtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||| ||||||   ||||||||||||||||||||||||| || ||||||||    
T  17028318 tgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattc 17028264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 16457833 - 16457874
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  16457833 gtattggcttgggaccttggagtgtgctcctcctcaaggtct 16457874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 27596350 - 27596403
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||| |||||||||| | |||||| ||||||||| |||||||||||| |||||    
T  27596350 gtattagcttgggatctgagagtgtcctcctcctcgaggtcttagattcgattc 27596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 29692439 - 29692398
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| |||||||| |||||||||||||||||||| ||||    
T  29692439 gtattggattgggatctgggagtgtgctcctcctcaaagtct 29692398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 43442219 - 43442260
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| ||| |||| |||||||||||||||||||||||||    
T  43442219 gtattggtttgagatctgggagtgtgctcctcctcaaggtct 43442260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Complemental strand, 18596054 - 18596010
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttag 391  Q
    ||||||||||| || | |||| |||||||||||||||||||||||    
T  18596054 gtattggcttgtgacctgggaatgtgctcctcctcaaggtcttag 18596010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 39327126 - 39327090
Alignment:
Q  364 gggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||||||||||||||||| || |||||    
T  39327126 gggagtgtgctcctcctcaaggtcttagcttcgattc 39327090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 400
Target Start/End: Complemental strand, 41165681 - 41165629
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||| |||||||||| |||||||||||||| ||| | |||||||||| |||||    
T  41165681 tattagcttgggatctgggagtgtgctccttctcgaagtcttagattcgattc 41165629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 38869791 - 38869832
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  38869791 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 38869832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 37274510 - 37274459
Alignment:
Q  349 attggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||| | |||||||||||||||||||||||||||| || |||||    
T  37274510 attggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattc 37274459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 31759711 - 31759658
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||||   ||||||||||||||||||||||||| ||||| |||||    
T  31759711 gtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattc 31759658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 37109404 - 37109363
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  37109404 gtattggcttgggacctgggagtgtgctcctcctcaaggtct 37109363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 53496900 - 53496953
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||| |||||| | |||||||||||||||||||| |||| |||||||||||    
T  53496900 gtattggtttgggacctgggagtgtgctcctcctcaaagtctcagatttgattc 53496953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 5450117 - 5450169
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||| ||| ||||||||||||||||||||||| | ||||| |||||    
T  5450117 tattggcttggaatctgggagtgtgctcctcctcaaggtttcagattcgattc 5450169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 23377980 - 23378020
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtct 23378020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 384
Target Start/End: Complemental strand, 51250598 - 51250538
Alignment:
Q  325 aacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaag 384  Q
    ||||||| |||||| ||||| || ||||||||||||||| ||||||||||||| |||||||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaag 51250538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 387
Target Start/End: Complemental strand, 37720290 - 37720227
Alignment:
Q  325 aacccacatgggtttgcctgatgt-attggcttgggatcggggagtgtgctcctcctcaaggtc 387  Q
    ||||||| |||||| ||||| ||| |||||||||||| | |||||||||| |||||||||||||    
T  37720290 aacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtc 37720227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 9241103 - 9241037
Alignment:
Q  323 ataacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||| |||||| ||||| || ||||||||||||||| || ||||||||||| ||| ||||||    
T  9241103 ataacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtct 9241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 4249200 - 4249253
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||| ||||||||||   |||||||||||||||||||||||| || ||||||||    
T  4249200 gtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattc 4249253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 7949507 - 7949466
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  7949507 gtattggcttgggacctcggagtgtgctcctcctcaaggtct 7949466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 19238654 - 19238589
Alignment:
Q  324 taacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||| |||||| ||||| || |||||||||||||   |||||||||||||||||| ||||||    
T  19238654 taacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtct 19238589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 39509097 - 39509134
Alignment:
Q  351 tggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  39509097 tggcttgggatctgggagtgtgctcctcctcgaggtct 39509134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 1729839 - 1729892
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||||   |||||||||||||||||| ||||||||||||||||||    
T  1729839 gtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattc 1729892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 16918631 - 16918578
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||| |||||||| |||||||||||||||||||||||||||| || |||||    
T  16918631 gtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattc 16918578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 42602577 - 42602630
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||| | |||||||||||||| ||||||||||||| ||||||||    
T  42602577 gtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattc 42602630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 42327448 - 42327407
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  42327448 gtattggcttgggacctgggagtgtgctcctcctcaaggtct 42327407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 37480075 - 37480139
Alignment:
Q  325 aacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| |||||| ||||| || ||||||||||||| | | |||||||||||||||||||||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtct 37480139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 387
Target Start/End: Complemental strand, 4439057 - 4438992
Alignment:
Q  323 ataacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtc 387  Q
    ||||||||| |||||| |||| ||| ||||  ||||||||| | ||||||||||||||||||||||    
T  4439057 ataacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggtc 4438992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 11251110 - 11251163
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||||   || |||||||||||||||||||||| || ||||||||    
T  11251110 gtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattc 11251163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 12086182 - 12086141
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | || ||||||||||||||||||||||    
T  12086182 gtattggcttgggacctggaagtgtgctcctcctcaaggtct 12086141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 29503294 - 29503335
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| |||||| | |||||||||||||||||||||||||    
T  29503294 gtattggtttgggacctgggagtgtgctcctcctcaaggtct 29503335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 34041641 - 34041588
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||| ||| ||||| | ||||||||||||||||||||||| || ||||||||    
T  34041641 gtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattc 34041588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 4262354 - 4262314
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||||| | || ||||||||||||||||||||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtct 4262314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 15786373 - 15786332
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  15786373 gtattggcttgggatctgggagtgtgctcctcctcaaggtct 15786332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 400
Target Start/End: Original strand, 41508831 - 41508907
Alignment:
Q  325 aacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||| |||||| ||||| || || ||| |||||||| ||||||||||||||||||||||||| |||||| ||||    
T  41508831 aacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcagatttaattc 41508907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 8177235 - 8177196
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggt 386  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8177235 gtattggcttgggatctgggagtgtgctcctcctcaaggt 8177196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 386
Target Start/End: Complemental strand, 44046201 - 44046162
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggt 386  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  44046201 gtattggcttgggatctgggagtgtgctcctcctcaaggt 44046162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 6650618 - 6650659
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  6650618 gtattggcttgggatcggggagtatgctcctcctcaatgtct 6650659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 10526846 - 10526899
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||| | |||||| |||||||||||||||||| ||||| |||||    
T  10526846 gtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattc 10526899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 33700826 - 33700785
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  33700826 gtattggcttggaatctgggagtgtgctcctcctcaaggtct 33700785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 399
Target Start/End: Original strand, 9964441 - 9964513
Alignment:
Q  328 ccacatgggtttgcctgatgt-attggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgatt 399  Q
    |||| |||||| ||||||||| |||| ||||||||| |||||||||||| ||||||| |||| || |||||||    
T  9964441 ccacttgggttagcctgatgttattgacttgggatctgggagtgtgctcttcctcaatgtctcaggtttgatt 9964513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 388
Target Start/End: Complemental strand, 19528403 - 19528339
Alignment:
Q  325 aacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| |||||| ||||| || |||||||||||||||   |||||||||||||||||||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtct 19528339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 51814494 - 51814558
Alignment:
Q  325 aacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| |||||| |||||||| ||||| |||| |||| | |||||||||||||||||||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtct 51814558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 394
Target Start/End: Complemental strand, 9643862 - 9643815
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatt 394  Q
    |||||||||||||||| ||||||||| || |||||||||||| |||||    
T  9643862 gtattggcttgggatctgggagtgtgttcatcctcaaggtctcagatt 9643815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 18459282 - 18459231
Alignment:
Q  349 attggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  18459282 attggcttgggacttgggagtgtgctcctccttgaggtcttagatttgattc 18459231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 9165273 - 9165207
Alignment:
Q  323 ataacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||| |||||| ||||  || ||||||||||||| | |||||||||||||||||||| ||||    
T  9165273 ataacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtct 9165207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 2799885 - 2799926
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||| |||||| |||| |||||||||||||||||||||||||    
T  2799885 gtataggcttgagatctgggagtgtgctcctcctcaaggtct 2799926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 21268046 - 21267993
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||||   |||||||||||||||||| ||||||| | ||||||||    
T  21268046 gtattggcttgggacttgggagtgtgctcctcctctaggtcttgggtttgattc 21267993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 31794317 - 31794276
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||||||   |||||||||||||||||||||||||    
T  31794317 gtattggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 36371493 - 36371534
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||| | | |||||||||||||||||||||||||    
T  36371493 gtattggcttggaacctgggagtgtgctcctcctcaaggtct 36371534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 380
Target Start/End: Complemental strand, 52336827 - 52336794
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcct 380  Q
    |||||||||||||||| |||||||||||||||||    
T  52336827 gtattggcttgggatctgggagtgtgctcctcct 52336794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 40257399 - 40257463
Alignment:
Q  325 aacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| |||||| ||||| || |||||||||| || | |||||||||||||||||| ||||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtct 40257463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 51703802 - 51703838
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaa 383  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  51703802 gtattggcttggaatctgggagtgtgctcctcctcaa 51703838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 11551 - 11592
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||||| |||||||||||||||||| ||||||    
T  11551 gtattggcttgggatctgggagtgtgctcctcctcgaggtct 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 13099 - 13058
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  13099 gtattggcttgagatctgggagtgtgctcctcctcaaggtct 13058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 2203515 - 2203556
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  2203515 gtattggcttgggacctgggagtgtgctcctcctcaaggtct 2203556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 365 - 400
Target Start/End: Complemental strand, 11793556 - 11793521
Alignment:
Q  365 ggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||||||||||||||||| ||||||||    
T  11793556 ggagtgtgctcctcctcaaggtcttaggtttgattc 11793521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 44780165 - 44780114
Alignment:
Q  349 attggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||||   ||||||||||||||||||||||||| || ||||||||    
T  44780165 attggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattc 44780114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 968385 - 968426
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||| ||||||    
T  968385 gtattggcttgggacctgggagtgtgctcctcctcgaggtct 968426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 3305241 - 3305200
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| |||||||| ||||| |||||||||||||||||||    
T  3305241 gtattggtttgggatctgggagcgtgctcctcctcaaggtct 3305200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 391
Target Start/End: Complemental strand, 3524451 - 3524410
Alignment:
Q  350 ttggcttgggatcggggagtgtgctcctcctcaaggtcttag 391  Q
    ||||||||||| |  |||||||||||||||||||||||||||    
T  3524451 ttggcttgggaccttggagtgtgctcctcctcaaggtcttag 3524410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 3624603 - 3624644
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | ||||||||||||||| |||||||||    
T  3624603 gtattggcttgggacctgggagtgtgctcctcttcaaggtct 3624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 6536543 - 6536584
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  6536543 gtattggcttgggacctaggagtgtgctcctcctcaaggtct 6536584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 7140732 - 7140785
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||||| ||| |||||||||||||| || ||| ||||| |||||    
T  7140732 gtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgattc 7140785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 11492126 - 11492073
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||||||| |||| |||||||||||||| ||| ||||||||| || |||||    
T  11492126 gtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgattc 11492073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 16852363 - 16852404
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||| ||||||    
T  16852363 gtattggcttgggacctgggagtgtgctcctcctcgaggtct 16852404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 19703540 - 19703499
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  19703540 gtattggcttgggacctgagagtgtgctcctcctcaaggtct 19703499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 23361702 - 23361661
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||| ||||||||  |||||||||||||||||||||||||    
T  23361702 gtattgacttgggatatgggagtgtgctcctcctcaaggtct 23361661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Original strand, 28783083 - 28783124
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||| || | |||||||||||||||||||||||||    
T  28783083 gtattggcttgagacctgggagtgtgctcctcctcaaggtct 28783124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 29858102 - 29858061
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||| ||||||    
T  29858102 gtattggcttgggaccagggagtgtgctcctcctcgaggtct 29858061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 35690117 - 35690076
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||||| ||| || ||||||||||||||||||    
T  35690117 gtattggcttgggatctgggtgtttgctcctcctcaaggtct 35690076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 36205198 - 36205259
Alignment:
Q  328 ccacatgggtttgcctgatgt-attggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||| |||||| | ||||||| ||||| ||| |||| |||||||||||||||||||||||||    
T  36205198 ccacttgggttggtctgatgttattggtttgagatctgggagtgtgctcctcctcaaggtct 36205259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 380
Target Start/End: Complemental strand, 6569823 - 6569791
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcct 380  Q
    ||||||||||||||| |||||||||||||||||    
T  6569823 tattggcttgggatctgggagtgtgctcctcct 6569791  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 22193400 - 22193364
Alignment:
Q  364 gggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||||||||||||||||||||||||| || |||||    
T  22193400 gggagtgtgctcctcctcaaggtcttaggttcgattc 22193364  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 26688865 - 26688929
Alignment:
Q  325 aacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| |||||| ||||| || | ||||||||||| |  ||||||||||||||||||||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtct 26688929  T

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Target: scaffold0291 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 2523 - 2482
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||| || ||||| |||||||||||||||||||||||||    
T  2523 gtattggttttggatctgggagtgtgctcctcctcaaggtct 2482  T

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Target: scaffold0258 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 15376 - 15335
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||||| | |||||||||||||||||| ||||||    
T  15376 gtattggcttgggacctgggagtgtgctcctcctcgaggtct 15335  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 6972 - 6931
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    ||||||||||||||  ||||||||||||||||||||| ||||    
T  6972 gtattggcttgggactggggagtgtgctcctcctcaaagtct 6931  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 388
Target Start/End: Complemental strand, 95024 - 94983
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtct 388  Q
    |||||||||||| | | |||||||||||||||||||||||||    
T  95024 gtattggcttggaacctgggagtgtgctcctcctcaaggtct 94983  T

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Target: scaffold0417 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 400
Target Start/End: Original strand, 10219 - 10295
Alignment:
Q  325 aacccacatgggtttgcctgatg-tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    ||||||| |||||| |||||||| ||||||||||||||| ||||||| ||  |||||| | ||||||  ||||||||    
T  10219 aacccacttgggttggcctgatgatattggcttgggatctgggagtgcgcctctcctcgaagtcttaagtttgattc 10295  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 387
Target Start/End: Complemental strand, 157040 - 157000
Alignment:
Q  347 gtattggcttgggatcggggagtgtgctcctcctcaaggtc 387  Q
    ||||||||||| |||| |||||||||||||||||| |||||    
T  157040 gtattggcttgagatctgggagtgtgctcctcctcgaggtc 157000  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 400
Target Start/End: Complemental strand, 81616 - 81564
Alignment:
Q  348 tattggcttgggatcggggagtgtgctcctcctcaaggtcttagatttgattc 400  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||| |||||    
T  81616 tattggtttggaatctggaagtgtgctcctcctcaaggtctcagattcgattc 81564  T

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