View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5597_low_1 (Length: 460)

Name: NF5597_low_1
Description: NF5597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5597_low_1
NF5597_low_1
[»] chr4 (55 HSPs)
chr4 (90-446)||(1326003-1326360)
chr4 (1-90)||(6755828-6755917)
chr4 (1-90)||(18491186-18491275)
chr4 (1-90)||(40228500-40228590)
chr4 (1-90)||(11651036-11651125)
chr4 (1-88)||(2654980-2655067)
chr4 (1-90)||(44134493-44134582)
chr4 (9-90)||(44817627-44817708)
chr4 (5-92)||(13233227-13233314)
chr4 (8-91)||(19653721-19653804)
chr4 (1-92)||(27270351-27270441)
chr4 (1-92)||(36955080-36955171)
chr4 (1-87)||(38141627-38141714)
chr4 (7-90)||(51001475-51001558)
chr4 (91-257)||(24539193-24539359)
chr4 (16-90)||(31664248-31664322)
chr4 (162-259)||(2527703-2527800)
chr4 (1-81)||(13613162-13613241)
chr4 (162-261)||(11653570-11653669)
chr4 (3-90)||(16925106-16925192)
chr4 (167-258)||(46420749-46420840)
chr4 (1-91)||(31581820-31581910)
chr4 (1-90)||(36584423-36584511)
chr4 (177-258)||(49748217-49748298)
chr4 (1-89)||(44745660-44745748)
chr4 (5-91)||(43564416-43564502)
chr4 (162-257)||(9061519-9061614)
chr4 (1-86)||(9024098-9024182)
chr4 (7-90)||(52581455-52581538)
chr4 (106-233)||(4875454-4875581)
chr4 (1-86)||(9046151-9046236)
chr4 (166-271)||(42351123-42351228)
chr4 (168-257)||(49357896-49357985)
chr4 (1-89)||(18668929-18669017)
chr4 (1-89)||(18714780-18714868)
chr4 (1-65)||(18735204-18735268)
chr4 (90-258)||(40682125-40682293)
chr4 (111-234)||(54243649-54243772)
chr4 (1-79)||(133361-133439)
chr4 (162-251)||(22455138-22455225)
chr4 (16-90)||(22647110-22647184)
chr4 (1-43)||(50767080-50767122)
chr4 (401-446)||(4875907-4875952)
chr4 (49-90)||(13869142-13869183)
chr4 (90-195)||(23633233-23633338)
chr4 (1-86)||(29006227-29006311)
chr4 (401-446)||(44185371-44185416)
chr4 (1-46)||(54795799-54795844)
chr4 (1-92)||(4632775-4632870)
chr4 (177-240)||(12758477-12758540)
chr4 (47-90)||(13857612-13857655)
chr4 (220-258)||(44783708-44783746)
chr4 (1-43)||(45670006-45670048)
chr4 (168-233)||(23633373-23633438)
chr4 (1-65)||(18707701-18707765)
[»] chr6 (22 HSPs)
chr6 (90-257)||(28078623-28078790)
chr6 (1-92)||(13405433-13405524)
chr6 (1-91)||(2660908-2660998)
chr6 (1-92)||(24635540-24635631)
chr6 (1-90)||(12698493-12698583)
chr6 (162-258)||(26898834-26898930)
chr6 (98-184)||(8674808-8674894)
chr6 (98-184)||(8685487-8685573)
chr6 (1-90)||(8560426-8560514)
chr6 (1-90)||(9079125-9079214)
chr6 (1-90)||(26468448-26468537)
chr6 (1-90)||(12996284-12996372)
chr6 (1-90)||(16461479-16461568)
chr6 (19-88)||(24130327-24130396)
chr6 (1-92)||(2399375-2399466)
chr6 (1-90)||(10290457-10290546)
chr6 (2-90)||(11450575-11450667)
chr6 (1-87)||(34023612-34023698)
chr6 (164-226)||(14365977-14366039)
chr6 (1-72)||(23259138-23259210)
chr6 (1-43)||(15469136-15469178)
chr6 (1-78)||(31969052-31969129)
[»] chr3 (35 HSPs)
chr3 (94-258)||(49453230-49453394)
chr3 (90-224)||(38362725-38362859)
chr3 (1-90)||(29126114-29126203)
chr3 (162-257)||(51657245-51657340)
chr3 (1-92)||(52201979-52202070)
chr3 (1-91)||(50527704-50527794)
chr3 (1-90)||(7160361-7160450)
chr3 (1-90)||(18163717-18163806)
chr3 (1-92)||(13594944-13595035)
chr3 (5-92)||(52571499-52571586)
chr3 (162-257)||(49067080-49067175)
chr3 (1-91)||(36633485-36633575)
chr3 (1-90)||(16908879-16908968)
chr3 (1-91)||(12251578-12251668)
chr3 (1-87)||(22729222-22729308)
chr3 (1-90)||(28952462-28952551)
chr3 (162-266)||(40823603-40823706)
chr3 (1-84)||(1092948-1093031)
chr3 (1-90)||(2618884-2618973)
chr3 (162-255)||(48314571-48314664)
chr3 (5-90)||(49169792-49169877)
chr3 (170-257)||(13495951-13496038)
chr3 (1-87)||(21259505-21259591)
chr3 (1-87)||(32270990-32271074)
chr3 (1-91)||(25246295-25246387)
chr3 (1-90)||(45045209-45045297)
chr3 (1-63)||(27742512-27742574)
chr3 (1-54)||(44205447-44205500)
chr3 (164-259)||(5557889-5557984)
chr3 (9-91)||(49657290-49657370)
chr3 (50-85)||(7441702-7441737)
chr3 (221-260)||(30761264-30761303)
chr3 (223-258)||(53926345-53926380)
chr3 (405-447)||(5387503-5387545)
chr3 (40-90)||(34660753-34660803)
[»] chr5 (33 HSPs)
chr5 (90-220)||(29379932-29380062)
chr5 (1-90)||(3631258-3631347)
chr5 (1-91)||(9737776-9737866)
chr5 (1-90)||(13013324-13013413)
chr5 (1-90)||(26525299-26525388)
chr5 (1-90)||(30772878-30772967)
chr5 (1-90)||(8074308-8074398)
chr5 (1-87)||(16823133-16823219)
chr5 (1-89)||(43358410-43358498)
chr5 (1-90)||(25701490-25701579)
chr5 (1-91)||(41084651-41084739)
chr5 (162-257)||(42691629-42691724)
chr5 (1-88)||(43348635-43348722)
chr5 (168-262)||(19121278-19121372)
chr5 (2-92)||(26297079-26297169)
chr5 (1-86)||(9596235-9596320)
chr5 (1-93)||(7440550-7440641)
chr5 (1-85)||(29390273-29390357)
chr5 (1-68)||(15374136-15374203)
chr5 (1-96)||(20486965-20487060)
chr5 (9-90)||(5844105-5844186)
chr5 (162-258)||(17413501-17413597)
chr5 (1-90)||(20656927-20657016)
chr5 (1-89)||(28662117-28662205)
chr5 (7-90)||(19577256-19577338)
chr5 (1-91)||(20071283-20071372)
chr5 (182-257)||(5399100-5399175)
chr5 (1-86)||(37042623-37042708)
chr5 (1-53)||(10925545-10925597)
chr5 (31-90)||(26784911-26784970)
chr5 (1-43)||(13084712-13084754)
chr5 (162-234)||(35392147-35392219)
chr5 (162-214)||(43622691-43622743)
[»] chr1 (37 HSPs)
chr1 (1-90)||(8530082-8530171)
chr1 (1-92)||(6849750-6849841)
chr1 (1-92)||(17285363-17285454)
chr1 (1-103)||(33012126-33012228)
chr1 (1-90)||(16693018-16693107)
chr1 (5-91)||(37125691-37125777)
chr1 (1-90)||(29169941-29170030)
chr1 (1-88)||(44052528-44052615)
chr1 (1-90)||(48708486-48708576)
chr1 (8-92)||(29981783-29981867)
chr1 (1-91)||(919779-919869)
chr1 (5-91)||(47561725-47561811)
chr1 (1-90)||(42371969-42372058)
chr1 (1-89)||(46224829-46224918)
chr1 (162-257)||(50290335-50290430)
chr1 (1-90)||(9042487-9042576)
chr1 (162-255)||(39268247-39268340)
chr1 (179-258)||(8998819-8998898)
chr1 (1-80)||(23177351-23177430)
chr1 (1-91)||(9246970-9247059)
chr1 (1-90)||(51139692-51139774)
chr1 (1-90)||(8086229-8086318)
chr1 (1-90)||(24790434-24790523)
chr1 (40-88)||(37343027-37343075)
chr1 (1-91)||(1243685-1243774)
chr1 (1-43)||(44317613-44317655)
chr1 (1-46)||(40428850-40428895)
chr1 (49-88)||(43532475-43532514)
chr1 (1-90)||(45836854-45836932)
chr1 (169-252)||(49193134-49193217)
chr1 (1-43)||(24544787-24544829)
chr1 (1-90)||(25299157-25299246)
chr1 (1-86)||(15841983-15842068)
chr1 (1-82)||(17879930-17880011)
chr1 (221-258)||(23085899-23085936)
chr1 (1-88)||(29056002-29056090)
chr1 (163-219)||(52407913-52407969)
[»] chr8 (34 HSPs)
chr8 (1-92)||(9830605-9830696)
chr8 (1-90)||(41838025-41838114)
chr8 (5-90)||(7012337-7012422)
chr8 (1-89)||(6316877-6316965)
chr8 (1-90)||(3659893-3659982)
chr8 (1-90)||(3886851-3886940)
chr8 (1-90)||(4231220-4231308)
chr8 (1-90)||(24797124-24797213)
chr8 (5-91)||(1098056-1098142)
chr8 (1-87)||(5590244-5590330)
chr8 (110-223)||(25629537-25629650)
chr8 (1-89)||(1183823-1183911)
chr8 (1-90)||(38567127-38567218)
chr8 (5-91)||(11635757-11635844)
chr8 (162-261)||(41842816-41842915)
chr8 (162-258)||(34893023-34893119)
chr8 (3-90)||(34934330-34934415)
chr8 (1-90)||(10092257-10092343)
chr8 (1-54)||(2317097-2317150)
chr8 (179-260)||(37063918-37063999)
chr8 (162-245)||(16913160-16913244)
chr8 (210-264)||(27853769-27853823)
chr8 (1-67)||(42556164-42556230)
chr8 (1-34)||(7413087-7413120)
chr8 (162-258)||(15096696-15096793)
chr8 (1-54)||(36060393-36060446)
chr8 (1-54)||(43117384-43117437)
chr8 (4-90)||(21434842-21434925)
chr8 (1-53)||(22658417-22658469)
chr8 (1-43)||(7242705-7242747)
chr8 (1-43)||(7422119-7422161)
chr8 (1-31)||(28564943-28564973)
chr8 (1-31)||(28572566-28572596)
chr8 (40-89)||(33979595-33979644)
[»] chr7 (43 HSPs)
chr7 (1-90)||(26873702-26873791)
chr7 (90-258)||(38029564-38029733)
chr7 (1-90)||(46027679-46027768)
chr7 (1-93)||(17166862-17166954)
chr7 (1-93)||(36675557-36675649)
chr7 (167-258)||(729013-729104)
chr7 (106-252)||(36159375-36159521)
chr7 (1-91)||(23562717-23562807)
chr7 (5-91)||(36358384-36358470)
chr7 (1-87)||(44468091-44468177)
chr7 (1-90)||(43859090-43859179)
chr7 (1-90)||(44724133-44724222)
chr7 (1-90)||(45350051-45350139)
chr7 (5-92)||(8461696-8461783)
chr7 (162-257)||(16718882-16718977)
chr7 (162-257)||(17693092-17693187)
chr7 (162-257)||(29322634-29322729)
chr7 (162-257)||(39703883-39703978)
chr7 (1-81)||(9624004-9624084)
chr7 (1-86)||(29502202-29502287)
chr7 (168-257)||(40462315-40462404)
chr7 (8-87)||(16834354-16834433)
chr7 (162-233)||(26455241-26455312)
chr7 (4-90)||(19692467-19692553)
chr7 (1-54)||(18104388-18104441)
chr7 (8-91)||(29662931-29663015)
chr7 (10-90)||(40054298-40054378)
chr7 (1-92)||(44142761-44142850)
chr7 (162-257)||(34405054-34405149)
chr7 (1-83)||(41367666-41367747)
chr7 (1-55)||(22723846-22723900)
chr7 (1-35)||(31931981-31932015)
chr7 (40-91)||(8727720-8727771)
chr7 (7-90)||(30781010-30781093)
chr7 (162-224)||(24396474-24396536)
chr7 (1-43)||(31428783-31428825)
chr7 (162-215)||(2732828-2732881)
chr7 (5-90)||(22499852-22499937)
chr7 (5-54)||(29075259-29075308)
chr7 (10-86)||(9013819-9013895)
chr7 (54-90)||(9014391-9014427)
chr7 (167-215)||(20078065-20078113)
chr7 (1-33)||(31065693-31065725)
[»] chr2 (32 HSPs)
chr2 (1-90)||(22674810-22674899)
chr2 (1-92)||(13616033-13616124)
chr2 (1-88)||(34983277-34983364)
chr2 (1-91)||(38527172-38527262)
chr2 (1-90)||(1115108-1115197)
chr2 (1-90)||(2249580-2249669)
chr2 (1-90)||(23869662-23869751)
chr2 (1-90)||(38763713-38763802)
chr2 (5-92)||(44545803-44545890)
chr2 (10-91)||(6750085-6750166)
chr2 (5-90)||(36436256-36436341)
chr2 (1-90)||(28745562-28745653)
chr2 (1-90)||(1021138-1021229)
chr2 (162-257)||(37995369-37995464)
chr2 (1-90)||(7366150-7366239)
chr2 (1-82)||(17526096-17526177)
chr2 (1-88)||(41699185-41699272)
chr2 (181-258)||(12008478-12008555)
chr2 (1-90)||(34494545-34494634)
chr2 (162-227)||(10128587-10128652)
chr2 (182-254)||(25882661-25882733)
chr2 (1-55)||(43471524-43471578)
chr2 (1-86)||(40897731-40897816)
chr2 (1-54)||(26293195-26293248)
chr2 (40-93)||(42473557-42473610)
chr2 (39-86)||(9467557-9467604)
chr2 (1-89)||(12994975-12995054)
chr2 (1-43)||(11764840-11764882)
chr2 (1-43)||(26860732-26860774)
chr2 (1-34)||(16194307-16194340)
chr2 (1-82)||(27640634-27640715)
chr2 (1-34)||(42016558-42016591)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-91)||(64932-65022)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-87)||(19048-19134)
[»] scaffold0891 (1 HSPs)
scaffold0891 (162-257)||(1259-1354)
[»] scaffold0210 (2 HSPs)
scaffold0210 (182-257)||(17760-17835)
scaffold0210 (182-257)||(25652-25727)
[»] scaffold0044 (1 HSPs)
scaffold0044 (162-257)||(87829-87924)
[»] scaffold0090 (1 HSPs)
scaffold0090 (162-257)||(12588-12683)
[»] scaffold1155 (1 HSPs)
scaffold1155 (169-257)||(68-156)
[»] scaffold0642 (1 HSPs)
scaffold0642 (169-257)||(150-238)
[»] scaffold0345 (1 HSPs)
scaffold0345 (169-257)||(10061-10149)
[»] scaffold0105 (1 HSPs)
scaffold0105 (169-257)||(28831-28919)
[»] scaffold0131 (1 HSPs)
scaffold0131 (48-90)||(11166-11208)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-91)||(303888-303977)
[»] scaffold0246 (1 HSPs)
scaffold0246 (162-224)||(8829-8891)
[»] scaffold0108 (1 HSPs)
scaffold0108 (167-257)||(13602-13691)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-34)||(331827-331860)


Alignment Details
Target: chr4 (Bit Score: 318; Significance: 1e-179; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 90 - 446
Target Start/End: Original strand, 1326003 - 1326360
Alignment:
Q  90 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattt 189  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  1326003 gatgtcatggtcataatatgatatgatatagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacattcaactaaactattt 1326102  T
Q  190 tgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagttatttataatttatacacgttggtataataaa 289  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1326103 tgttacatgttactgtcaaatattaccttcgatatgacgcgtgcgatagcacgggtcgatggtctaattatttataatttatacacgttggtataataaa 1326202  T
Q  290 aaccctaaacgctagtagaccataagctcacaaccg-tttgtttgtcacaaaacaaagtagtttggattgcacgcttacagagaattggcttcagctttg 388  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1326203 aaccctaaacgctagtagaccataagctcacaaccgttttgtttgtcacaaaacaaagtactttggattgcacgcttacagagaattggcttcagctttg 1326302  T
Q  389 acaaagaaatccatccatggctacaaaaagtgacaaggttagcaacactagctatatt 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1326303 acaaagaaatccatccatggctacaaaaagtgacaaggttagcaacactagctatatt 1326360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6755917 - 6755828
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  6755917 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 6755828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18491275 - 18491186
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||| ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  18491275 aatctcacaaaatagacctataatcgttgattttttaatttttccgagtgggccgtggcccaccccagcccatgaagggctccgccactg 18491186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40228500 - 40228590
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttc-gagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  40228500 aatctcgcaaaatagacctataatcgttgattttttaaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 40228590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 11651036 - 11651125
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || | |||||||||||||||||| ||||||||||||||||||||||    
T  11651036 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggcgggccgtggcccaccccagcccatgaagggctccgccactg 11651125  T

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Target: chr4; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2654980 - 2655067
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccac 88  Q
    ||||||||||| |||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  2654980 aatctcgcaaactagatctataatcgttgattttttaattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccac 2655067  T

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Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44134582 - 44134493
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||| ||||||||||||||||||||||||||| ||| |||| || |||| ||||||||||||||| ||||||||||||||||||||||    
T  44134582 aatctcacaaaatagacctataatcgttgattttttaatttttccgggtggaccgtggcccaccccagcccatgaagggctccgccactg 44134493  T

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Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 44817627 - 44817708
Alignment:
Q  9 aaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||| ||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  44817627 aaaatagacctatagtcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 44817708  T

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Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 13233314 - 13233227
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||| ||||||||||||||||| ||| |||| || |||||||||||||||||||| || ||||||| |||||||||||||    
T  13233314 tcgcaaaatagatctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcctatgaaggactccgccactgat 13233227  T

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Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 19653721 - 19653804
Alignment:
Q  8 caaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    ||||||||||||||||||||||||||| | | ||||  | |||||||||||||||||||| |||||||||||||||||||||||    
T  19653721 caaaatagacctataatcgttgatttttttatttttcggtgtgggccgtggcccaccccagcccatgaagggctccgccactga 19653804  T

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Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 27270441 - 27270351
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    ||||||||||||||||| ||||||| |||||||| ||| |||| || |||||| ||||||||||||| ||||||||||||||||||||||||    
T  27270441 aatctcgcaaaatagacttataatcattgattttttaa-ttttccgggtgggctgtggcccaccccagcccatgaagggctccgccactgat 27270351  T

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Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 36955080 - 36955171
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| |  |||| |  ||||||||||| ||||||||||||||||||||||||    
T  36955080 aatctcgcaaaatagacctataatcgttgattttttaattttttgggatgggtcacggcccaccccagcccatgaagggctccgccactgat 36955171  T

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Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 38141627 - 38141714
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttga-ttttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || |||||||||||||| ||||| |||||||||||||||||||    
T  38141627 aatctcgcaaaatagacctataatcgttgatttttttaatttttccgggtgggccgtggccctccccagcccatgaagggctccgcca 38141714  T

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Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 51001558 - 51001475
Alignment:
Q  7 gcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||| ||||| |||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  51001558 gcaaaatagacttataaacgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 51001475  T

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Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 91 - 257
Target Start/End: Original strand, 24539193 - 24539359
Alignment:
Q  91 atgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactatttt 190  Q
    |||||||||| ||| |||| |||| ||||||||||| ||||||| |  ||||||||||||| |     |  || || |||||||| || |||||||||||    
T  24539193 atgtcatggaaatattatgttatggtacagtaccaaagtctatgcttcttaatattatgaaatactatatgacgatcatgacattcatgtaaactatttt 24539292  T
Q  191 gttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| | ||||  ||||||||||||||| ||||||| |||||| |||||| |||||||||||||||    
T  24539293 gttacctattaccgtcaaatattaccttccatatgacccgtgcgttagcactggtcgatggtctagt 24539359  T

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Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 31664248 - 31664322
Alignment:
Q  16 acctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||| |||||||| ||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  31664248 acctataatcattgattttttaatttttccgggtgggccgtggcccaccccatcccatgaagggctccgccactg 31664322  T

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Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 2527703 - 2527800
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtta 259  Q
    |||||||||||||| ||||||||||||||||||  | ||||  ||||||||||||||| |||||||  ||||| |||||||| |||||||||||||||    
T  2527703 acaattatgacattcatctaaactattttgttatctattaccgtcaaatattaccttccatatgacatgtgcgttagcacggatcgatggtctagtta 2527800  T

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Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 13613162 - 13613241
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggct 81  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||| |||| |||||||||||||    
T  13613162 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggccca-cccagcccatgaagggct 13613241  T

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Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 11653669 - 11653570
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagttatt 261  Q
    ||||| |||||||| |||||||||||||| |||| | ||||  ||||||||||||||| ||||||| |||||  ||||||||||||||| ||||||||||    
T  11653669 acaatcatgacattcatctaaactattttattacctattaccgtcaaatattaccttccatatgacccgtgcattagcacgggtcgatgatctagttatt 11653570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 16925192 - 16925106
Alignment:
Q  3 tctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||| |||||||||||||||||||||| ||| |||| || |||| ||||||||||||||  ||||||||||||||||||||||    
T  16925192 tctcgcaaattagacctataatcgttgattttttaatttttccgggtggaccgtggcccacccc-gcccatgaagggctccgccactg 16925106  T

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Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 46420749 - 46420840
Alignment:
Q  167 tatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    ||||||||| ||||||||||||||||||| | ||||  ||||||||||||||| |||||||| ||||  |||||||| ||||||||||||||    
T  46420749 tatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatatgacttgtgcattagcacggatcgatggtctagtt 46420840  T

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Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31581820 - 31581910
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    ||||| ||||||||||||||||||||||| |||| ||| ||||  | |||| ||||||||||||||| ||||||||||||| |||||||||    
T  31581820 aatctagcaaaatagacctataatcgttgtttttttaatttttcggggtggaccgtggcccaccccagcccatgaagggcttcgccactga 31581910  T

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Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36584511 - 36584423
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||| |||||||||  |||||||| ||  |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  36584511 aatctcgcaaaatatacctataattattgattttttat-ttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 36584423  T

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Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 49748298 - 49748217
Alignment:
Q  177 atctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    ||||||||||||||| ||| | ||||  ||||||||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  49748298 atctaaactattttgctacctattaccgtcaaatattaccttccatatgacccgtgcgttagcacgggtcgatggtctagtt 49748217  T

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Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44745660 - 44745748
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||  |  ||||||||||||||||||| ||||| || ||||||||||||    
T  44745660 aatcttgcaaaatagacctataatcgttgattttttaatttttctggatgggccgtggcccaccccagcccattaaaggctccgccact 44745748  T

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Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 43564502 - 43564416
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||||||||||||||||| ||| |||| ||  ||| | ||||||||||||| || |||||| |||||||||||||    
T  43564502 tcgcaaaatagacctataatcgttgattttttaatttttccggatggactgtggcccaccccagccaatgaagagctccgccactga 43564416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 9061519 - 9061614
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  | ||||||||| ||| |||||||   |||| ||||||||||||||||||||||    
T  9061519 acaatcatgacattcatctaaactattttgttacctattaccgttaaatattacattccatatgacctatgcgttagcacgggtcgatggtctagt 9061614  T

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Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 9024182 - 9024098
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    |||| |||||| |||| |||||||| || ||||| ||| ||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  9024182 aatcccgcaaagtagatctataatcattaattttttaattttttcgggtgggccgtggccca-cccatcccataaagggctccgcc 9024098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 52581538 - 52581455
Alignment:
Q  7 gcaaaatagacctataatcgttgattttctaactttttcgag-tgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||| |   ||||||  | ||||||||||||||||| | ||||||||||||||||||||||    
T  52581538 gcaaaatagacctataatcgttgattttttttatttttccggatgggccgtggcccaccc-agcccatgaagggctccgccactg 52581455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 4875581 - 4875454
Alignment:
Q  106 tatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattttgttacatgttactct 205  Q
    |||| |||| ||||||||||| ||||||| |  ||||||||||||| |    ||  ||||| |||||||| ||||||||||||||||||| | |||   |    
T  4875581 tatgttatggtacagtaccaacgtctatgcttcttaatattatgaaatattacatgacaatcatgacattcatctaaactattttgttacctattaacgt 4875482  T
Q  206 caaatattaccttcgatatgactcgtgc 233  Q
    |||||||||||||| ||||||| |||||    
T  4875481 caaatattaccttccatatgacccgtgc 4875454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9046151 - 9046236
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    |||||||||||||||| ||||||||||| ||||| ||| ||||  ||||||   ||||||||||| | |||||||||| |||||||    
T  9046151 aatctcgcaaaatagatctataatcgttaattttttaatttttctgagtggattgtggcccaccctagcccatgaaggactccgcc 9046236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 271
Target Start/End: Original strand, 42351123 - 42351228
Alignment:
Q  166 ttatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagttatttata 265  Q
    |||||||||| ||||||||||||||||||  | ||||  ||||||||||||||| |||||||| || || ||||||   | ||||||||||| || |||     
T  42351123 ttatgacattcatctaaactattttgttatctattaccgtcaaatattaccttccatatgacttgtacgttagcacaaattgatggtctagtgatgtatt 42351222  T
Q  266 atttat 271  Q
    ||||||    
T  42351223 atttat 42351228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 49357896 - 49357985
Alignment:
Q  168 atgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    |||||||| ||||||| || | | |||| | ||||  ||||||||||||||| |||||||  ||||| ||||||||||||||||||||||    
T  49357896 atgacattcatctaaaatactattttacctattaccgtcaaatattaccttccatatgaccagtgcgttagcacgggtcgatggtctagt 49357985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18669017 - 18668929
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    ||||||||||| |||||||||||||||| ||||| ||| |||| |  ||||||||||  | |||| | ||||||||||||||| |||||    
T  18669017 aatctcgcaaagtagacctataatcgttaattttttaatttttccaggtgggccgtgatcaaccctagcccatgaagggctccaccact 18668929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18714868 - 18714780
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    ||||||||||| |||||||||||||||| |||||  || |||||||  ||||| |||| |||||| |  |||| |||||||||||||||    
T  18714868 aatctcgcaaagtagacctataatcgttaatttttaaattttttcggatgggctgtggtccaccctagtccataaagggctccgccact 18714780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18735268 - 18735204
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccc 65  Q
    |||||||||||||||||||||||||||| ||||| ||| |||| || || |||||||| ||||||    
T  18735268 aatctcgcaaaatagacctataatcgttaattttttaatttttccgggtaggccgtggtccaccc 18735204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 258
Target Start/End: Complemental strand, 40682293 - 40682125
Alignment:
Q  90 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattt 189  Q
    ||||||||||| ||| |||| | || |||||||||||  |||||| |  ||||||||||||| |     | |||||| ||  |||| |||||||||||||    
T  40682293 gatgtcatggaaatattatgttgtggtacagtaccaacatctatgcttcttaatattatgaaatactatataacaatcatagcattcatctaaactattt 40682194  T
Q  190 tgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    |||||| | || |  | ||||||||||||||||||| | |||||| ||||| ||||| ||| |||||||    
T  40682193 tgttacctattgccgttaaatattaccttcgatatgtcccgtgcgttagcatgggtcaatgatctagtt 40682125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 54243649 - 54243772
Alignment:
Q  111 tatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattttgttacatgttactctcaaat 210  Q
    |||| ||||||||||| ||||||| |  ||||||||||||| |     | |||||| ||||||||||| |||||||||||||||| | |||   ||||||    
T  54243649 tatggtacagtaccaacgtctatgcttcttaatattatgaaatactatataacaatcatgacatttatttaaactattttgttacctattatcgtcaaat 54243748  T
Q  211 attaccttcgatatgactcgtgcg 234  Q
    |||| |||| ||||||| ||||||    
T  54243749 attaacttccatatgacccgtgcg 54243772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 133439 - 133361
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaaggg 79  Q
    |||||| ||||||| ||||||||||| | ||||| ||| |||| |  |||||  |||||||||||||||||||||||||    
T  133439 aatctcacaaaatatacctataatcgctaattttttaatttttccaggtgggatgtggcccaccccatcccatgaaggg 133361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 22455138 - 22455225
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatgg 251  Q
    |||||||||||||| || ||||||||||| |||| | ||||  ||||||||||||||| ||||||| | |||| ||  ||||||||||||    
T  22455138 acaattatgacattcatttaaactattttattacttattaccgtcaaatattaccttccatatgacccatgcgtta--acgggtcgatgg 22455225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 22647184 - 22647110
Alignment:
Q  16 acctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||| ||||||||||| | | ||||  |  |||||||||||||||| || ||||||||||||||||||||||    
T  22647184 acctatagtcgttgatttttttatttttctggatgggccgtggcccacctcagcccatgaagggctccgccactg 22647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 50767122 - 50767080
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  50767122 aatctcgcaaaatagacctataatcgttgattttttaattttt 50767080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 4875907 - 4875952
Alignment:
Q  401 atccatggctacaaaaagtgacaaggttagcaacactagctatatt 446  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||    
T  4875907 atccatggctacaaaaagtgacaaggttagtaaccgtagctatatt 4875952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 13869183 - 13869142
Alignment:
Q  49 tgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  13869183 tgggccgtggcccaccctaacccatgaagggctccgccactg 13869142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 23633233 - 23633338
Alignment:
Q  90 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattt 189  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||||||| |  ||||||||||||| |     |  ||||| ||||||||||| ||||||||||    
T  23633233 gatgtcatggaaatattatgttatggtacagtaccaacgtctatggttcttaatattatgaaatactatatgacaatcatgacatttatttaaactattt 23633332  T
Q  190 tgttac 195  Q
    ||||||    
T  23633333 tgttac 23633338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 29006311 - 29006227
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    |||||||| ||||| ||||||||| ||| ||||| ||| |||||||  ||| ||||||||||| ||| ||||| ||||||||||||    
T  29006311 aatctcgcgaaataaacctataatagttaatttt-taaatttttcggatggaccgtggcccactccagcccataaagggctccgcc 29006227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 44185371 - 44185416
Alignment:
Q  401 atccatggctacaaaaagtgacaaggttagcaacactagctatatt 446  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||    
T  44185371 atccatggctacaaaaagtgacaaggttagtaaccgtagctatatt 44185416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 54795799 - 54795844
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcg 46  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||    
T  54795799 aatcttgcaaaatagacctataatcgttgattttttaattttttcg 54795844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4632775 - 4632870
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtg-----ggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    ||||||||||||||||| ||||||||||| |||| ||| ||||||| |||     |||||||||||| | || ||||||||||||| ||||| ||||    
T  4632775 aatctcgcaaaatagacttataatcgttgtttttttaa-tttttcgggtggggttggccgtggcccatcacagcccatgaagggcttcgccattgat 4632870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 12758540 - 12758477
Alignment:
Q  177 atctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagca 240  Q
    ||||||||||||||||||| | ||||  ||||||||||||||| ||||||| ||| || |||||    
T  12758540 atctaaactattttgttacttattaccgtcaaatattaccttccatatgacccgtacgttagca 12758477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 13857655 - 13857612
Alignment:
Q  47 agtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||    
T  13857655 agtgggccgtggcccaccctagcccatgaagggcttcgccactg 13857612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 44783746 - 44783708
Alignment:
Q  220 gatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  44783746 gataagacccgtgcgatagcacgggtcgatggtctagtt 44783708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45670048 - 45670006
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||    
T  45670048 aatctcgcaaaataaacctataatcgttgattttttaattttt 45670006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 23633438 - 23633373
Alignment:
Q  168 atgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgc 233  Q
    |||||||| || |||||||||||||||  | ||||  |||||||||||||||| |||||| |||||    
T  23633438 atgacattcatttaaactattttgttatctattaccgtcaaatattaccttcggtatgacccgtgc 23633373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18707765 - 18707701
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccc 65  Q
    ||||| ||||| |||||||||||||||| ||||| ||| |||  || ||||||||||| ||||||    
T  18707765 aatcttgcaaagtagacctataatcgttaattttttaattttgccgggtgggccgtggtccaccc 18707701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 3e-61; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 90 - 257
Target Start/End: Complemental strand, 28078790 - 28078623
Alignment:
Q  90 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattt 189  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |  |||||| |||    
T  28078790 gatgtcatggacataatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaattaaactcttt 28078691  T
Q  190 tgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    |||||||||| |||   ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  28078690 tgttacatgtcactgctaaatattaccttcgatatgacccgtgcgatatcacgggtcgatggtctagt 28078623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13405433 - 13405524
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||||| ||||| |||||||||||||| |||||||||||||||||| |||||    
T  13405433 aatctcgcaaaatagacctataatcgttaattttttaattttttcgggtgggtcgtggcccaccccaacccatgaagggctccgcctctgat 13405524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2660908 - 2660998
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||| ||||||||| |||| |||||||||||||||||||||||    
T  2660908 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggtcgtggcccatcccagcccatgaagggctccgccactga 2660998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24635540 - 24635631
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||| ||||||||||||| ||||||||||    
T  24635540 aatctcgcaaattagacctataatcgttgattttttaatttttccggatgggccgtggcccaccccagcccatgaagggcttcgccactgat 24635631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12698583 - 12698493
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttc-gagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||| | || ||||||||||||||||| ||||||||||||||||||||||    
T  12698583 aatctcgcaaaatagacctataattgttgattttttaaatttttccgggtcggccgtggcccaccccagcccatgaagggctccgccactg 12698493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 26898930 - 26898834
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  ||||||||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  26898930 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatatgacccgtgtggtagcacgggtcgatggtctagtt 26898834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 8674808 - 8674894
Alignment:
Q  98 ggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaac 184  Q
    ||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||| | ||||||||||||||| | ||||||    
T  8674808 ggacataatatgatatggtacaataccaatatatatgataattaatattatgaatttaattaaaacaattatgacattcaactaaac 8674894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 8685487 - 8685573
Alignment:
Q  98 ggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaac 184  Q
    ||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||| | ||||||||||||||| | ||||||    
T  8685487 ggacataatatgatatggtacaataccaatatatatgataattaatattatgaatttaattaaaacaattatgacattcaactaaac 8685573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8560514 - 8560426
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||| ||||||||||| |||||||| ||| ||||||||||||||||||    
T  8560514 aatctcgcaatttagacctataatcgttgattttttaattttttcgggtgggccgtgg-ccaccccaacccttgaagggctccgccactg 8560426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9079125 - 9079214
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| ||  ||||| |||||||||||||  |||||||||||||||||||||    
T  9079125 aatctcgcaaattagacctataatcgttgattttttaatttttccggatgggctgtggcccaccccagtccatgaagggctccgccactg 9079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 26468537 - 26468448
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||| ||||||||| ||| |||| | ||||| |||||||||| |||| |||||||| |||||||||||||    
T  26468537 aatctcgcaaaatagacctataatagttgattttttaatttttccaagtggaccgtggcccatcccagcccatgaaaggctccgccactg 26468448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12996372 - 12996284
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||| | |||| ||| |||||||| ||| |||| ||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  12996372 aatctcgcaaaatatatctattatcattgattttttaa-ttttccgagtaggctgtggcccaccccaacccatgaagggctccgccactg 12996284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16461479 - 16461568
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||| | |||||||||||||||| |||  ||| || |||||||||| |||||||||  ||||||||| |||||||||||    
T  16461479 aatctcgcaaaataggcttataatcgttgattttttaatatttccgggtgggccgtgacccaccccagtccatgaaggactccgccactg 16461568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 24130327 - 24130396
Alignment:
Q  19 tataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccac 88  Q
    |||||||||||||||| ||| |||| || |||||| ||||||||||||| ||||||||||||||||||||    
T  24130327 tataatcgttgattttttaatttttccgggtgggcagtggcccaccccagcccatgaagggctccgccac 24130396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2399375 - 2399466
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    ||||||||| |||||||||||||| ||| |||||  |  ||||||  |||||| ||||||||||||| |||||||||||||||||| |||||    
T  2399375 aatctcgcagaatagacctataattgttcatttttaatttttttcaggtgggctgtggcccaccccaacccatgaagggctccgcccctgat 2399466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10290546 - 10290457
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||| ||||||||| |||||| ||||| ||| || |  | ||||||| |||||||||| | ||||||||||||||||||||||    
T  10290546 aatctcgcaaagtagacctatgatcgttaattttttaatttctctgggtgggccatggcccaccctagcccatgaagggctccgccactg 10290457  T

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Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 11450575 - 11450667
Alignment:
Q  2 atctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccac----cccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||  ||||||||||||| ||  || |||| || ||||||||||||||||    |||| ||||||||||||||||||||||    
T  11450575 atctcgcaaaatagatatataatcgttgatatttaaatttttccgggtgggccgtggcccaccccacccagcccatgaagggctccgccactg 11450667  T

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Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34023612 - 34023698
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||||  |||||||||  |||| ||||  |||| || ||||||||||    
T  34023612 aatctcgtaaaatagacctataatcgttgattttttaattttttcaggtgggccgtaacccatcccagtccataaaaggctccgcca 34023698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 14366039 - 14365977
Alignment:
Q  164 aattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatga 226  Q
    ||||||||||||||||||||||||||||||   | ||||  ||||||||| ||||||||||||    
T  14366039 aattatgacatttatctaaactattttgttttctattaccatcaaatattgccttcgatatga 14365977  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 23259138 - 23259210
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaacttttt-cgagtgggccgtggcccaccccatccca 72  Q
    ||||||||||  | |||||||||| ||||||||| ||| ||||| || |||||||||||||||||||| ||||    
T  23259138 aatctcgcaagttggacctataattgttgattttttaatttttttcgcgtgggccgtggcccaccccacccca 23259210  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15469178 - 15469136
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||    
T  15469178 aatcttgcaaaatagacctataatcgttgattttttaattttt 15469136  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31969052 - 31969129
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagg 78  Q
    ||||||||||| ||||||||| |||||| |||||  || ||||  | |||||| ||||||||||| | ||||||||||    
T  31969052 aatctcgcaaagtagacctatgatcgttaatttttaaatttttatgggtgggctgtggcccaccctagcccatgaagg 31969129  T

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Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 94 - 258
Target Start/End: Complemental strand, 49453394 - 49453230
Alignment:
Q  94 tcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattttgtt 193  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |    
T  49453394 tcatggacataatatgatatgatacaataccaatgtctatgataattaatattatgaatttaattagaacaattatgacatttaactaaactattttgct 49453295  T
Q  194 acatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    |||| ||||| | ||||||||||||| ||||| | || |||||||||| ||||||||||||||||    
T  49453294 acatattactataaaatattaccttcaatatgtcccgcgcgatagcacaggtcgatggtctagtt 49453230  T

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Target: chr3; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 90 - 224
Target Start/End: Original strand, 38362725 - 38362859
Alignment:
Q  90 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattt 189  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  38362725 gatgtcatggacatactatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaactaaactattt 38362824  T
Q  190 tgttacatgttactctcaaatattaccttcgatat 224  Q
    | |||||| ||||  ||||||||||||||||||||    
T  38362825 tattacatattaccgtcaaatattaccttcgatat 38362859  T

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Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 29126114 - 29126203
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  29126114 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 29126203  T

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Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 51657245 - 51657340
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||||||  ||||| ||||||||||||||||||||||    
T  51657245 acaattatgacattcatctaaactattttgttacttgttaccctcaaatattaccttccatatgacatgtgcgttagcacgggtcgatggtctagt 51657340  T

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Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 52202070 - 52201979
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||||||||| ||||||||| ||||||||||||||||||||||||    
T  52202070 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtgacccaccccagcccatgaagggctccgccactgat 52201979  T

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Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 50527704 - 50527794
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||| |||||| |||||||||| ||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  50527704 aatctcgcaaaatagaactataaacgttgattttttaattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactga 50527794  T

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Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7160361 - 7160450
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||| |||||||| |||||||||||||    
T  7160361 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaaaggctccgccactg 7160450  T

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Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18163806 - 18163717
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| | | |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  18163806 aatctcgcaaaatagacctataatcgttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 18163717  T

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Target: chr3; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13594944 - 13595035
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||  |||||||||||||||||||| ||||||| ||||||||||||||||    
T  13594944 aatctcgcaaaatagatctataatcgttgattttttaattttttcaggtgggccgtggcccaccccagcccatgacgggctccgccactgat 13595035  T

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Target: chr3; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 52571499 - 52571586
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    ||||||| |||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  52571499 tcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgat 52571586  T

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Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 49067175 - 49067080
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  ||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  49067175 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatatgacccgtgcgttagcacgggtcgatggtctagt 49067080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36633575 - 36633485
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||| ||||||||||||||||||||||||||| ||| |||| ||  |||| |||||||||||||| |||||||||||||||||||||||    
T  36633575 aatctcacaaaatagacctataatcgttgattttttaatttttccggatgggtcgtggcccaccccagcccatgaagggctccgccactga 36633485  T

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Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16908879 - 16908968
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||| ||| | | |||| || |||||||||||||||||||| |||||||||||||| |||||||    
T  16908879 aatctcgcaaaatagacctataatcgttgaattttttatttttccgggtgggccgtggcccaccccagcccatgaagggctctgccactg 16908968  T

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Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12251578 - 12251668
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||| |||||||||||||||||||||||||||  || |||| || ||||||||||| |||||||| |||||||||||||| ||||||||    
T  12251578 aatctcacaaaatagacctataatcgttgatttttaaatttttccgggtgggccgtggtccaccccagcccatgaagggctctgccactga 12251668  T

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Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22729308 - 22729222
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    ||||||| |||||||||||||| ||||||||||| ||| |||| || |||||||||||||||||||| ||||| |||||||||||||    
T  22729308 aatctcgaaaaatagacctatagtcgttgattttttaatttttccgggtgggccgtggcccaccccagcccattaagggctccgcca 22729222  T

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Target: chr3; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28952462 - 28952551
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||| ||||||||||||||| ||| |||| |  ||||  |||||||||||||| ||||||||||||||||||||||    
T  28952462 aatctcgcaaaatagacccataatcgttgattttttaatttttccaggtggatcgtggcccaccccagcccatgaagggctccgccactg 28952551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 266
Target Start/End: Original strand, 40823603 - 40823706
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagttatt 261  Q
    ||||| |||||||| |||||||||||||| |||| | ||||  ||||||||||||||| ||||||| |||||  ||||||||||||||||||||| ||||    
T  40823603 acaatcatgacattcatctaaactatttttttacctattacggtcaaatattaccttccatatgacccgtgccttagcacgggtcgatggtctag-tatt 40823701  T
Q  262 tataa 266  Q
    |||||    
T  40823702 tataa 40823706  T

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Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1092948 - 1093031
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccg 84  Q
    ||||||||||||||||| |||| ||||||||||| ||| |||| || ||||||||||||||||| || ||||||||||||||||    
T  1092948 aatctcgcaaaatagacttatagtcgttgattttttaatttttccgggtgggccgtggcccacctcagcccatgaagggctccg 1093031  T

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Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2618973 - 2618884
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||  | ||| ||||| ||| |||||||  |||||||||||||||| || ||||||||||||||||||||||    
T  2618973 aatctcgcaaaatagacctatggtggttaattttttaattttttcggatgggccgtggcccacctcaacccatgaagggctccgccactg 2618884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 48314571 - 48314664
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtcta 255  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  ||||||||||||||| ||||||| ||| || ||||||||||||||| ||||    
T  48314571 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatatgacccgtacgttagcacgggtcgatgatcta 48314664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 49169877 - 49169792
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||| | ||||||  | |||||  ||||||||||||| ||||| ||||||||||||||||    
T  49169877 tcgcaaaatagacctataatcgttgatttttttacttttctgggtgggttgtggcccaccccagcccataaagggctccgccactg 49169792  T

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Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 13495951 - 13496038
Alignment:
Q  170 gacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    |||||| |||||||||||||| |||| | ||||  ||||||||||||||||||||||| | | || ||||||||||||||||||||||    
T  13495951 gacattcatctaaactattttattacctattaccgtcaaatattaccttcgatatgacccttacgttagcacgggtcgatggtctagt 13496038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 21259505 - 21259591
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    |||||| |||||||||||||||||||||||||||  || |||| ||  |||| |||||||||| ||| |||||||||||||||||||    
T  21259505 aatctcacaaaatagacctataatcgttgatttttaaatttttccggatgggtcgtggcccactccaacccatgaagggctccgcca 21259591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32270990 - 32271074
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    |||||||||||||||||  |||||| |||||||| ||| |||| || |||||| ||||||||||||| |||||||| ||||||||||    
T  32270990 aatctcgcaaaatagac--ataatcattgattttttaatttttccgggtgggctgtggcccaccccagcccatgaaaggctccgcca 32271074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 25246295 - 25246387
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaa--ctttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    ||||||||||||||||||||||| |||||||||| | |   ||||||  ||||| |||||||||||||| | |||||| ||||||||||||||    
T  25246295 aatctcgcaaaatagacctataaacgttgatttttttattttttttcaggtgggtcgtggcccaccccagctcatgaaaggctccgccactga 25246387  T

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Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 45045297 - 45045209
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||| | |||||||| |||||||| ||| ||||||| ||||||| | |||||||||| ||||||||| ||||||| ||||    
T  45045297 aatctcgcaaaataaatctataatcattgattttttaattttttcg-gtgggccatcgcccaccccaacccatgaagagctccgcaactg 45045209  T

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Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27742574 - 27742512
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccac 63  Q
    |||||| |||||||||||||||| |||||||||| ||| |||| || ||||||||||||||||    
T  27742574 aatctctcaaaatagacctataagcgttgattttttaatttttccgggtgggccgtggcccac 27742512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44205500 - 44205447
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 54  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||    
T  44205500 aatctcgcaaaatagatctataatcgttgattttttaattttttcgggtgggcc 44205447  T

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Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 259
Target Start/End: Original strand, 5557889 - 5557984
Alignment:
Q  164 aattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtta 259  Q
    |||||||||||| ||||||| ||||||||||| | |||   ||||||||||| ||| |||||||  ||||| ||||||||| | ||||||| ||||    
T  5557889 aattatgacattcatctaaattattttgttacctattatcatcaaatattacattccatatgacctgtgcgttagcacgggccaatggtcttgtta 5557984  T

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Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 49657290 - 49657370
Alignment:
Q  9 aaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||| ||||||||||| ||| |||| || |||||||||| |||| |||| |||||||| ||||||||| ||||    
T  49657290 aaaatagacctatagtcgttgattttttaatttttccgggtgggccgtgaccca-cccagcccatgaa-ggctccgccgctga 49657370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 7441702 - 7441737
Alignment:
Q  50 gggccgtggcccaccccatcccatgaagggctccgc 85  Q
    |||||||||||||||||| |||||||||||||||||    
T  7441702 gggccgtggcccaccccagcccatgaagggctccgc 7441737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 260
Target Start/End: Complemental strand, 30761303 - 30761264
Alignment:
Q  221 atatgactcgtgcgatagcacgggtcgatggtctagttat 260  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  30761303 atatgacccgtgcgatagcacgggtggatggtctagttat 30761264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 53926380 - 53926345
Alignment:
Q  223 atgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    |||||||||||| |||||||||||||||||||||||    
T  53926380 atgactcgtgcgttagcacgggtcgatggtctagtt 53926345  T

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Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 447
Target Start/End: Original strand, 5387503 - 5387545
Alignment:
Q  405 atggctacaaaaagtgacaaggttagcaacactagctatattt 447  Q
    |||||||||||||||||||||||||| |||| || ||||||||    
T  5387503 atggctacaaaaagtgacaaggttagtaacagtaactatattt 5387545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 34660803 - 34660753
Alignment:
Q  40 tttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||  |||||||||||||||||||  |||||||| ||||||||||||    
T  34660803 tttttcggatgggccgtggcccaccccaatccatgaagagctccgccactg 34660753  T

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Target: chr5 (Bit Score: 103; Significance: 4e-51; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 29379932 - 29380062
Alignment:
Q  90 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattt 189  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  29379932 gatgtcatggacataatatgatatggtacagtaccaatgtctatgataattaatattatgaatttaattagaacaattatgacattcaactaaactattt 29380031  T
Q  190 tgttacatgttactctcaaatattaccttcg 220  Q
    ||||||||||||||  |||||||||| ||||    
T  29380032 tgttacatgttactgccaaatattactttcg 29380062  T

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Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3631347 - 3631258
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  3631347 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 3631258  T

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Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9737776 - 9737866
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||||||||||||||| ||||| ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  9737776 aatctcgcaaaatagacctataatcgttaattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactga 9737866  T

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Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 13013324 - 13013413
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  13013324 aatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 13013413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 26525299 - 26525388
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| | | |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  26525299 aatctcgcaaaatagacctataatcgttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 26525388  T

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Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 30772967 - 30772878
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  30772967 aatcttgcaaaatagacctataatcgttgattttttaattttttcgggtgagccgtggcccaccccaacccatgaagggctccgccactg 30772878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 8074308 - 8074398
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgag-tgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| |||  ||||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  8074308 aatctcgcaaaatagacctataatcgttgattttttaaaattttccaggtgggccgtggcccaccccagcccatgaagggctccgccactg 8074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 16823219 - 16823133
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||| |||||||||||||||||||    
T  16823219 aatctcgcaaaatagacctataatcgttgattttttaatttttccggatgggccgtggcccaccccagcccatgaagggctccgcca 16823133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43358498 - 43358410
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    |||||||||||||||||||||||||||||||||| | | |||| || ||||||||||||||||| || |||||||||||||||||||||    
T  43358498 aatctcgcaaaatagacctataatcgttgattttttcatttttccgggtgggccgtggcccacctcagcccatgaagggctccgccact 43358410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25701490 - 25701579
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||| |||||||||| ||||||||||||||||| ||| |||| ||  ||||||||||||||||||| ||||||||||||||||||||||    
T  25701490 aatcttgcaaaatagatctataatcgttgattttttaatttttccggatgggccgtggcccaccccagcccatgaagggctccgccactg 25701579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 41084651 - 41084739
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||| ||  ||||||||||| |||||||||||||||||||||||    
T  41084651 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtggacc--ggcccaccccagcccatgaagggctccgccactga 41084739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 42691724 - 42691629
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| |||||||||||||||||| || | ||  ||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  42691724 acaatcatgacattcatctaaactattttgttagatatcaccatcaaatattaccttccatatgactcgtgcgttagcacaggtcgatggtctagt 42691629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43348722 - 43348635
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccac 88  Q
    |||||||||||||| ||||||||||||| ||||| ||| |||| || |||||||||||||| ||||| ||||||||||||||||||||    
T  43348722 aatctcgcaaaataaacctataatcgttaattttttaatttttccgggtgggccgtggcccgccccagcccatgaagggctccgccac 43348635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 19121372 - 19121278
Alignment:
Q  168 atgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagttattt 262  Q
    |||||||| ||||||||||||||||||| | ||||  | ||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||    
T  19121372 atgacattcatctaaactattttgttacctattaccgtgaaatattaccttccatatgaccagtgcgttagcacgggtcgatggtctagttattt 19121278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 26297079 - 26297169
Alignment:
Q  2 atctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||| |||||||||||||||||| ||||||||| ||| ||||||| |||| |||||||||| |||| | ||||||||||||||||||||||    
T  26297079 atcttgcaaaatagacctataattgttgattttttaattttttcgggtggaccgtggcccatcccagctcatgaagggctccgccactgat 26297169  T

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Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9596235 - 9596320
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||| | |||||||||||||||||||| ||  ||||||||||||||    
T  9596235 aatctcgcaaaatagacatataatcgttgattttttaatttttttgggtgggccgtggcccaccccagcctttgaagggctccgcc 9596320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7440550 - 7440641
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgatg 93  Q
    |||||||||||||||| ||||||||||||||||| ||| |||| |  ||||||||| ||||| |||| |||||||||||||||||||||||||    
T  7440550 aatctcgcaaaatagatctataatcgttgattttttaatttttccaggtgggccgtagccca-cccaacccatgaagggctccgccactgatg 7440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 29390357 - 29390273
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgc 85  Q
    ||||||| |||||| ||||||||||||||||||| ||| |||| |  |||||||||||||||||||| |||||||||||||||||    
T  29390357 aatctcgtaaaatacacctataatcgttgattttttaatttttccaggtgggccgtggcccaccccagcccatgaagggctccgc 29390273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15374203 - 15374136
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccat 68  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||    
T  15374203 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccat 15374136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 20487060 - 20486965
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgatgtca 96  Q
    ||||| |||||||| |||||| |||||| ||||| ||| ||||||||||||||||||||||| |  | |||||||||||||| |||||| ||||||    
T  20487060 aatcttgcaaaatatacctatgatcgttaattttttaattttttcgagtgggccgtggcccagcttagcccatgaagggctctgccacttatgtca 20486965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 5844186 - 5844105
Alignment:
Q  9 aaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||| ||| |||| ||  || ||||| |||||||||| ||||| ||||||||||||||||    
T  5844186 aaaatagacctataatcgttgattttttaatttttccggatgtgccgtagcccaccccaacccattaagggctccgccactg 5844105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 17413597 - 17413501
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  ||||||||||||||| ||||||  ||||| |   ||||||||||||||||||||    
T  17413597 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatatgatccgtgctaacacacgggtcgatggtctagtt 17413501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 20656927 - 20657016
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||| ||| |||||||||||| ||||||||| ||| |||||||  | |||| |||||||||||| || ||||| |||||||||||||    
T  20656927 aatctcgtaaattagacctataattgttgattttttaattttttcggataggccatggcccaccccagcctatgaaaggctccgccactg 20657016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28662205 - 28662117
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    ||||||| |||||||| ||||  | ||| ||||| ||| |||| || |||||||||||||||||||| ||||| |||||||||||||||    
T  28662205 aatctcgtaaaatagatctatggtggttaattttttaatttttccgggtgggccgtggcccaccccagcccataaagggctccgccact 28662117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 19577256 - 19577338
Alignment:
Q  7 gcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||| ||||||||||| ||||| ||  |||| || |||||||||||||||||  | ||||||||||||||||||||||    
T  19577256 gcaaaatagatctataatcgttaattttttat-ttttccgggtgggccgtggcccaccttagcccatgaagggctccgccactg 19577338  T

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Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 20071283 - 20071372
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||| ||||||| | || |||||||| ||||| ||| |||| ||||||||||||| ||||||| | |||||||||||||||||| ||||    
T  20071283 aatctcacaaaataaatctttaatcgttaatttt-taatttttccgagtgggccgtgacccaccctagcccatgaagggctccgcctctga 20071372  T

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Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 5399100 - 5399175
Alignment:
Q  182 aactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    |||||||||||||| | ||||  |||||||||||||||||||||||  ||||| ||| | || |||||||||||||    
T  5399100 aactattttgttacctattaccgtcaaatattaccttcgatatgacgtgtgcgttagtatggatcgatggtctagt 5399175  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37042623 - 37042708
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    |||||||||||||||| |||| ||| |  ||||| ||| ||||||| |||||| ||||| ||||| |  |||||||||||||||||    
T  37042623 aatctcgcaaaatagatctatgatcatcaattttttaattttttcgggtgggctgtggctcaccctaaaccatgaagggctccgcc 37042708  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 10925597 - 10925545
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggc 53  Q
    ||||||||||| ||||| |||||||||||||||| ||| |||| |||||||||    
T  10925597 aatctcgcaaattagacatataatcgttgattttttaatttttccgagtgggc 10925545  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 26784970 - 26784911
Alignment:
Q  31 ttttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||| ||| |||| || |||||||||||||||||  | ||||||||||||||||||||||    
T  26784970 ttttttaatttttccgggtgggccgtggcccacctaagcccatgaagggctccgccactg 26784911  T

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Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13084712 - 13084754
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||    
T  13084712 aatctcgcaaattagacctataatcgttgattttttaattttt 13084754  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 35392219 - 35392147
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcg 234  Q
    ||||| |||| ||| ||||||||||||||||||| | ||||  ||||||||||| ||| |||| || ||||||    
T  35392219 acaatcatgatattcatctaaactattttgttacctattaccgtcaaatattactttccatatcacccgtgcg 35392147  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 43622691 - 43622743
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatatta 214  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  ||||||||||    
T  43622691 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatatta 43622743  T

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Target: chr1 (Bit Score: 74; Significance: 9e-34; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8530171 - 8530082
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  8530171 aatctcgcaaaatagacctataatcgttgattttttaattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactg 8530082  T

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Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 6849841 - 6849750
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  6849841 aatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgat 6849750  T

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Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17285363 - 17285454
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  17285363 aatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactgat 17285454  T

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Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33012126 - 33012228
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgatgtcatgga 100  Q
    |||||| ||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||| || ||||||| |    
T  33012126 aatctcacaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccattggtgtcatgaa 33012225  T
Q  101 cat 103  Q
    |||    
T  33012226 cat 33012228  T

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Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16693018 - 16693107
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||| |||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  16693018 aatctcgtaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 16693107  T

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Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 37125777 - 37125691
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||||| || |||||||||||||||||||||||    
T  37125777 tcgcaaaatagacctataatcgttgattttataatttttccgggtgggccgtggcccacctcagcccatgaagggctccgccactga 37125691  T

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Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29170030 - 29169941
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| || |||||| ||||||||||||| ||||||||||||||||||||||    
T  29170030 aatctcgcaaattagacctataatcgttgattttttaatttttccgggtgggctgtggcccaccccagcccatgaagggctccgccactg 29169941  T

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Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44052528 - 44052615
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccac 88  Q
    ||||||||||||||||||||||||||||||||||  || |||| || ||| |||||||||||||||| ||||||||||||||||||||    
T  44052528 aatctcgcaaaatagacctataatcgttgatttttaaatttttccgggtgagccgtggcccaccccagcccatgaagggctccgccac 44052615  T

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Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 48708486 - 48708576
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttct-aactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| | || |||||||  ||||||||||| ||||||| ||||||||||||||||||||||    
T  48708486 aatctcgcaaaatagacctataatcgttgatttttttaattttttcggatgggccgtggctcaccccagcccatgaagggctccgccactg 48708576  T

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Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 29981783 - 29981867
Alignment:
Q  8 caaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||| |||||||||||||||||||||| ||| |||| ||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  29981783 caaagtagacctataatcgttgattttttaatttttccggatgggccgtggcccaccccagcccatgaagggctccgccactgat 29981867  T

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Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 919779 - 919869
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||| |||||||||||||||||  || |||| ||  ||||||||||||||||||| |||||||||||||||| ||||||    
T  919779 aatctcgcaaaatagatctataatcgttgatttttaaatttttccggatgggccgtggcccaccccagcccatgaagggctccgtcactga 919869  T

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Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 47561811 - 47561725
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||||||||||||||||| | | |||| || |||||||||||||||||| | || ||||||||||||||||||||    
T  47561811 tcgcaaaatagacctataatcgttgatttttttatttttccgggtgggccgtggcccacccaaacctatgaagggctccgccactga 47561725  T

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Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 42372058 - 42371969
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||| |||||||||||||||||| |||||||| ||| ||||  | ||||||||||||||||||||  |||||||||||||||||||||    
T  42372058 aatctcacaaaatagacctataatcattgattttttaatttttctgggtgggccgtggcccaccccaatccatgaagggctccgccactg 42371969  T

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Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46224829 - 46224918
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttct-aactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    ||||||||||||||||  |||||||||| ||||| | || ||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  46224829 aatctcgcaaaatagatttataatcgttaatttttttaattttttcgggtggaccgtggcccaccccaacccatgaagggctccgccact 46224918  T

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Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 50290335 - 50290430
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| ||||||||||||||  ||| | ||||  ||||||||||| ||| ||||||| |||||| ||||||||||||||||||||||    
T  50290335 acaatcatgacattcatctaaactatttttctacctattaccgtcaaatattacgttccatatgacccgtgcgttagcacgggtcgatggtctagt 50290430  T

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Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9042487 - 9042576
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||| ||| ||||||||||||  |||||||| ||| |||| ||  |||||||||||||| |||| ||||||||||||||||||||||    
T  9042487 aatctcgtaaattagacctataattattgattttttaatttttccggatgggccgtggcccagcccagcccatgaagggctccgccactg 9042576  T

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Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 39268340 - 39268247
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtcta 255  Q
    |||||||||||||| ||||||| || |||||||| | |||   ||||||||||| ||||||||||| |||||| |||| |||||||||||||||    
T  39268340 acaattatgacattcatctaaagtactttgttacctattatcgtcaaatattacattcgatatgacccgtgcgttagcgcgggtcgatggtcta 39268247  T

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Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 8998819 - 8998898
Alignment:
Q  179 ctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    ||||||||||||||||| | ||||  ||||||||||| |||||||||||  ||||| ||||||||||| |||||||||||    
T  8998819 ctaaactattttgttacctattaccgtcaaatattacattcgatatgacctgtgcgttagcacgggtcaatggtctagtt 8998898  T

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Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23177430 - 23177351
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggc 80  Q
    ||||||||||||||||| ||||||||||||||||  || |||| || |||| ||||||||||||||| |||| |||||||    
T  23177430 aatctcgcaaaatagacttataatcgttgatttttaaatttttccgggtggaccgtggcccaccccagcccacgaagggc 23177351  T

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Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9246970 - 9247059
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||| |||||||| || ||||| ||| ||||||| |||||  |||||||||| || ||||||||||||||| |||||||    
T  9246970 aatctcgcaaaatagatctataatccttaattttttaa-tttttcgggtgggttgtggcccacctcagcccatgaagggctccaccactga 9247059  T

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Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 51139774 - 51139692
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| | |||||       |||||||| ||||||||||||||| ||||||    
T  51139774 aatctcgcaaaatagacctataatcgttgattttttaattttttggggtggg-------ccaccccagcccatgaagggctccaccactg 51139692  T

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Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8086318 - 8086229
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||| |||||||||| ||||| ||||||||||| ||| ||||||| |||| ||||| ||||||  | || |||||| ||||||||||||    
T  8086318 aatctagcaaaatagatctatagtcgttgattttttaattttttcgggtggaccgtgacccaccttagcctatgaagagctccgccactg 8086229  T

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Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 24790523 - 24790434
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||| |||| |||| ||||||||||| | | ||||  | ||||| |||||||||| ||| ||||||||||||||| ||||||    
T  24790523 aatctcgcaaaacagacttatagtcgttgatttttttatttttctgggtgggtcgtggcccactccagcccatgaagggctccaccactg 24790434  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 37343075 - 37343027
Alignment:
Q  40 tttttcgagtgggccgtggcccaccccatcccatgaagggctccgccac 88  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  37343075 ttttccgagtgggccgtggccgaccccagcccatgaagggctccgccac 37343027  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1243685 - 1243774
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||||||||||| ||| ||||| ||| |||| || ||| ||||||| | | || | |||||||||||||||||| ||||    
T  1243685 aatctcgcaaaatagacctataattgttaattttttaatttttccgggtgagccgtgg-ctatccgagcccatgaagggctccgcctctga 1243774  T

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Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44317655 - 44317613
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  44317655 aatctcgcaaaatagacctataatcgttgattttttaattttt 44317613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40428850 - 40428895
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcg 46  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||    
T  40428850 aatctcgcaaaatagacctatagtcgttgattttttaattttttcg 40428895  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 43532475 - 43532514
Alignment:
Q  49 tgggccgtggcccaccccatcccatgaagggctccgccac 88  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  43532475 tgggccgtggcccaccccaacccatggagggctccgccac 43532514  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 45836932 - 45836854
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||| ||||||||||||||||||||||| ||| |||| |           ||||||||||| ||||||||||||||||||||||    
T  45836932 aatctcgcaatatagacctataatcgttgattttttaatttttac-----------ggcccaccccagcccatgaagggctccgccactg 45836854  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 49193217 - 49193134
Alignment:
Q  169 tgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggt 252  Q
    ||||||| | ||||| ||||||||||| | ||||  ||||||||||| ||| ||||||| |||||| |||||||| || |||||    
T  49193217 tgacattcaactaaattattttgttacctattaccgtcaaatattacattcaatatgacacgtgcgttagcacggatcaatggt 49193134  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24544787 - 24544829
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||    
T  24544787 aatctcgcaaaatagacttataatcgttgattttttaattttt 24544829  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25299157 - 25299246
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaa-ctttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||||||||||| || ||||| |||  |||||||  |||||||||| |  ||||| |||||||| ||||||| |||||    
T  25299157 aatctcgcaaaatagacctataatcatttattttttaatttttttcggatgggccgtgg-cggccccagcccatgaaaggctccgtcactg 25299246  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15842068 - 15841983
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    ||||||| |||||||| ||| | ||||| ||||| ||| |||| |  ||||| |||||||||||||| |||||||| || ||||||    
T  15842068 aatctcgtaaaatagagctacagtcgttaattttttaatttttccaggtgggtcgtggcccaccccagcccatgaaagggtccgcc 15841983  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17879930 - 17880011
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctc 82  Q
    |||||||||||||| || ||||||  || | ||| ||| |||  || |||||||||| ||||||||| ||||||||||||||    
T  17879930 aatctcgcaaaataaacatataattattaaatttttaattttcccgggtgggccgtgacccaccccagcccatgaagggctc 17880011  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 23085936 - 23085899
Alignment:
Q  221 atatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  23085936 atatgacccgtgcgttagcacgggtcgatggtctagtt 23085899  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29056002 - 29056090
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgag-tgggccgtggcccaccccatcccatgaagggctccgccac 88  Q
    |||||||||||||| | | ||||||||| ||||| | | ||||||  | |||| |||||||||||| | || |||||||||||||||||    
T  29056002 aatctcgcaaaataaatcaataatcgttaatttttttaatttttctggatgggtcgtggcccaccctaacctatgaagggctccgccac 29056090  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 52407969 - 52407913
Alignment:
Q  163 caattatgacatttatctaaactattttgttacatgttactctcaaatattaccttc 219  Q
    |||| |||||||| ||||||||||||||||||| | ||||  |||||| ||||||||    
T  52407969 caatcatgacattcatctaaactattttgttacctattaccgtcaaatgttaccttc 52407913  T

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Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9830696 - 9830605
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  9830696 aatctcgcaaaataaacctataatcgttgattttttaattttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactgat 9830605  T

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Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41838025 - 41838114
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || | |||||||||||||||||| ||||||||||||||||||||||    
T  41838025 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggcgggccgtggcccaccccagcccatgaagggctccgccactg 41838114  T

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Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 7012422 - 7012337
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||||||| |||||||| ||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||    
T  7012422 tcgcaaaatagacctataatcattgattttttaatttttccgagtgagccgtggcccaccccagcccatgaagggctccgccactg 7012337  T

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Target: chr8; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6316965 - 6316877
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    |||||| ||||||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  6316965 aatctcacaaaatagacctataattgttgattttttaattttttcgggtgggccgtggcccaccccagcccatgaaaggctccgccact 6316877  T

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Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 3659893 - 3659982
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||| |||||||||||||||| ||| |||| || |||||| |||||||| |||| ||||||||||||||||||||||    
T  3659893 aatctcgcaaaatagacttataatcgttgattttataatttttccgggtgggctgtggcccatcccagcccatgaagggctccgccactg 3659982  T

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Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 3886851 - 3886940
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||  |||||||| |||||| ||||||||||||||||||||||    
T  3886851 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgaaccgtggcctaccccagcccatgaagggctccgccactg 3886940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4231308 - 4231220
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||| | ||||||||||| ||||||||||    
T  4231308 aatctcgtaaaatagacctataatcgttgattttttaa-tttttcgggtgggccgtggcccaccctagcccatgaaggggtccgccactg 4231220  T

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Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24797124 - 24797213
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||| ||||||||||||||||||||||||||||  || |||| ||  ||||||||||||||||||| ||||||||||||||||||||||    
T  24797124 aatcttgcaaaatagacctataatcgttgatttttaaatttttccggatgggccgtggcccaccccagcccatgaagggctccgccactg 24797213  T

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Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 1098142 - 1098056
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    ||||||| |||||||||||||||||||||| ||| |||| || ||||||||||||||||| ||  ||||||||||||||||||||||    
T  1098142 tcgcaaattagacctataatcgttgattttttaatttttccgggtgggccgtggcccacctcacgccatgaagggctccgccactga 1098056  T

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Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 5590244 - 5590330
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    ||||||| |||||||||||||| ||||||||||| ||| |||| || |||||||||||||||||||| ||||| |||||||||||||    
T  5590244 aatctcgaaaaatagacctatagtcgttgattttttaatttttccgggtgggccgtggcccaccccagcccattaagggctccgcca 5590330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 25629650 - 25629537
Alignment:
Q  110 atatgatacagtaccaatgtctatgataattaatattatgaatttaatcagaacaattatgacatttatctaaactattttgttacatgttactctcaaa 209  Q
    ||||| || |||| ||| ||||||| ||||||||||||||| || ||| || |||||||||||||| | |||||||||||||||||||||||    ||||    
T  25629650 atatggtaaagtaacaacgtctatggtaattaatattatgatttgaattaggacaattatgacattcaactaaactattttgttacatgttagcgccaaa 25629551  T
Q  210 tattaccttcgata 223  Q
    ||||||||||||||    
T  25629550 tattaccttcgata 25629537  T

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Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1183911 - 1183823
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    |||||||||||||||| ||||||||||| ||||| ||| |||||    ||||||||||||||||||| |||||||||||||||||||||    
T  1183911 aatctcgcaaaatagatctataatcgtttattttttaattttttttgttgggccgtggcccaccccagcccatgaagggctccgccact 1183823  T

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Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38567218 - 38567127
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttc-gagtgggccgtggccca-ccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||| ||||||||||||||||||| ||| |||| | | ||||||||||||||| ||||| ||||||||||||||||||||||    
T  38567218 aatctcgcaaaatatacctataatcgttgattttttaatttttcctgggtgggccgtggcccacccccagcccatgaagggctccgccactg 38567127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 11635844 - 11635757
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattt-tctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    ||||||||||||||||| ||| ||||||| | ||| ||||||| ||||| |||||||||||| | |||||||||||||||||||||||    
T  11635844 tcgcaaaatagacctatgatcattgatttatttaattttttcgggtgggtcgtggcccaccctagcccatgaagggctccgccactga 11635757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 41842915 - 41842816
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagttatt 261  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  ||| ||||||| ||| |||||||  ||||  ||||||||||||||||||||||||||    
T  41842915 acaatcatgacattcatctaaactattttgttacctattaccgtcagatattactttccatatgacctgtgcattagcacgggtcgatggtctagttatt 41842816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 34893119 - 34893023
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    |||||||||||||| || |||||| ||||||||| | ||||  |||||||||||| ||  ||||||| ||||| ||||||||||| |||||||||||    
T  34893119 acaattatgacattcatttaaactgttttgttacctattaccgtcaaatattaccctccttatgacttgtgcgttagcacgggtcaatggtctagtt 34893023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 34934330 - 34934415
Alignment:
Q  3 tctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||| ||||||||||||  |  ||| | ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  34934330 tctcgcaaattagacctataat--taaattatttaaatttttcgggtgggccgtggcccaccccagcccatgaagggctccgccactg 34934415  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10092343 - 10092257
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||  ||| ||| ||||||| |||    ||||||||||||| |||||||||||||||| |||||    
T  10092343 aatctcgcaaaatagacctataatcgttgtatttttaattttttcgggtg---agtggcccaccccagcccatgaagggctccgtcactg 10092257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2317150 - 2317097
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 54  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  2317150 aatctcgcaaaatagacctataatcgttgattttttaatttttccgagtgggcc 2317097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 37063918 - 37063999
Alignment:
Q  179 ctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagttat 260  Q
    ||||||||||||||||| | ||| | ||||||||||| ||||||||||| ||||| |  ||||||||| |||||||||||||    
T  37063918 ctaaactattttgttacttattattgtcaaatattactttcgatatgacccgtgctaacgcacgggtcaatggtctagttat 37063999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 16913244 - 16913160
Alignment:
Q  162 acaattatgacatttatctaaactattttgtt-acatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggt 245  Q
    ||||| ||||| || ||||||||||||||||| |||| ||||  ||||||||||||||| ||||||| |||||| ||||||||||    
T  16913244 acaatcatgactttcatctaaactattttgtttacatattaccgtcaaatattaccttccatatgacccgtgcgttagcacgggt 16913160  T

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Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 27853823 - 27853769
Alignment:
Q  210 tattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagttatttat 264  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||    
T  27853823 tattaccttcaatatgacccgtgcgttagcacgggtcgatggtctagttgtttat 27853769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42556164 - 42556230
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccacccca 67  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||  ||| ||||||||| |||||    
T  42556164 aatctcgcaaaatagacctataatcgttgattttttaatttttccggatggaccgtggcccgcccca 42556230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7413120 - 7413087
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgatttt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  7413120 aatctcgcaaaatagacctataatcgttgatttt 7413087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 15096793 - 15096696
Alignment:
Q  162 acaattatgacatttatctaaactattttgtt-acatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    |||||||||||||| |||||||||||||| || || | ||||  |||||||||||||||||||| || ||| || ||||  || ||||| ||||||||    
T  15096793 acaattatgacattcatctaaactatttttttaacctattaccatcaaatattaccttcgatataacccgtacgttagcttggttcgatagtctagtt 15096696  T

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Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36060446 - 36060393
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 54  Q
    |||||||||||||| ||||||||||||||||||| ||| |||| || |||||||    
T  36060446 aatctcgcaaaatatacctataatcgttgattttttaatttttccgggtgggcc 36060393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43117437 - 43117384
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 54  Q
    |||||||||||||||||||||||| ||||||||| ||| |||| || |||||||    
T  43117437 aatctcgcaaaatagacctataattgttgattttttaatttttccgggtgggcc 43117384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 21434925 - 21434842
Alignment:
Q  4 ctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||| ||||||||||||||||||| ||| |||| ||  ||||||   |||||| |||  ||||||| |||||||||||||    
T  21434925 ctcgcaaaataaacctataatcgttgattttttaatttttccggatgggcc---gcccactccagtccatgaaaggctccgccactg 21434842  T

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Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22658417 - 22658469
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggc 53  Q
    ||||||||||||||||||||||| |||||||||| ||| |||| || ||||||    
T  22658417 aatctcgcaaaatagacctataagcgttgattttttaatttttccgggtgggc 22658469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7242705 - 7242747
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||    
T  7242705 aatctcgcaaaataaacctataatcgttgattttttaattttt 7242747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7422119 - 7422161
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||    
T  7422119 aatctcgcaaaataaacctataatcgttgattttttaattttt 7422161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 28564973 - 28564943
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgat 31  Q
    |||||||||||||||||||||||||||||||    
T  28564973 aatctcgcaaaatagacctataatcgttgat 28564943  T

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Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 28572596 - 28572566
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgat 31  Q
    |||||||||||||||||||||||||||||||    
T  28572596 aatctcgcaaaatagacctataatcgttgat 28572566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 33979644 - 33979595
Alignment:
Q  40 tttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    ||||||||||||| ||| ||||| |||| | |||||||||||||||||||    
T  33979644 tttttcgagtgggtcgtagcccatcccagctcatgaagggctccgccact 33979595  T

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Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 26873791 - 26873702
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||||||||||| |||||||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  26873791 aatctcgcaaaatagacctataatcattgattttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 26873702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 90 - 258
Target Start/End: Original strand, 38029564 - 38029733
Alignment:
Q  90 gatgtcatggacataatatgatatgatacagtaccaatgtctatgataattaatattatgaatttaatc-agaacaattatgacatttatctaaactatt 188  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||||||| |  ||||||||||||| ||| |  |  ||||| || ||||| ||||||||||||    
T  38029564 gatgtcatggaaatattatgttatggtacagtaccaacgtctatgcttcttaatattatgaaattactatatgacaatcataacattcatctaaactatt 38029663  T
Q  189 ttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    ||||||| | ||||  ||||||||||||||| ||||||  |||| | |||||||||||||||||||||||    
T  38029664 ttgttacctattaccgtcaaatattaccttcaatatgatccgtgtgttagcacgggtcgatggtctagtt 38029733  T

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Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 46027768 - 46027679
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||| ||||||||||||||| |||| |||||||||||||||||    
T  46027768 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtggaccgtggcccaccccagcccacgaagggctccgccactg 46027679  T

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Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17166954 - 17166862
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgatg 93  Q
    |||||||||||||||| ||||||| ||||||||| ||| ||||  | |||||||||||||||||||| |||||||||||||||||| ||||||    
T  17166954 aatctcgcaaaatagaactataattgttgattttttaatttttctgggtgggccgtggcccaccccagcccatgaagggctccgccgctgatg 17166862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36675557 - 36675649
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgatg 93  Q
    |||||| ||||||||| |||||||| || ||||| ||| |||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  36675557 aatctcacaaaatagatctataatcattaattttttaattttttcggatgggccgtggcccaccccagcccatgaagggctccgccactgatg 36675649  T

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Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 729013 - 729104
Alignment:
Q  167 tatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    ||||||||| ||||||||||||| ||||| | ||||  ||||||||||||||||||||||| ||| || |||||||||||||||||||||||    
T  729013 tatgacattcatctaaactatttggttacctattaccgtcaaatattaccttcgatatgacccgtacgttagcacgggtcgatggtctagtt 729104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 106 - 252
Target Start/End: Original strand, 36159375 - 36159521
Alignment:
Q  106 tatgatatgatacagtaccaatgtctatgataattaatattatgaatt-taatcagaacaattatgacatttatctaaactattttgttacatgttactc 204  Q
    |||| |||| ||||||||||| ||||||| |  ||||||||||||| | | ||  || |||| |||||||| ||||||||||||||||||| | ||||      
T  36159375 tatgttatggtacagtaccaacgtctatgcttcttaatattatgaaatattatatga-caatcatgacattcatctaaactattttgttacctattaccg 36159473  T
Q  205 tcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggt 252  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||    
T  36159474 tcaaatattacctttcatatgactcgtgcgttagcacgggtcgatggt 36159521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 23562717 - 23562807
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||| ||||||||||||||||| ||| |||| |  ||||||| |||||||||||| | |||||||||||||||||||||    
T  23562717 aatctcgcaaaatagatctataatcgttgattttttaatttttccaggtgggccatggcccaccccagctcatgaagggctccgccactga 23562807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 36358384 - 36358470
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||| ||||||||||||||||| ||| |||| |  |||| ||||||||||||||| |||||||||||||||||||||||    
T  36358384 tcgcaaaatagatctataatcgttgattttttaatttttccaggtggaccgtggcccaccccagcccatgaagggctccgccactga 36358470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44468091 - 44468177
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    |||||||||||||||| ||||||||||||||||| ||| |||| |  |||||||||||||||||||| || ||||||||||||||||    
T  44468091 aatctcgcaaaatagatctataatcgttgattttttaatttttccaggtgggccgtggcccaccccagcctatgaagggctccgcca 44468177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43859179 - 43859090
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||| | |||||||||||||||||||| ||| |||| |  |||||||||||||||||| | ||||||||||||||||||||||    
T  43859179 aatctcgcaaattcgacctataatcgttgattttttaatttttccaggtgggccgtggcccaccctagcccatgaagggctccgccactg 43859090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 44724133 - 44724222
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||| ||||||| ||||||||| |||| |||| ||| |||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  44724133 aatctctcaaaataaacctataatagttggttttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactg 44724222  T

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Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 45350139 - 45350051
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||| |||||||||||||||| ||| |||| || |||| |||||||||| |||| ||||||||||||||||||||||    
T  45350139 aatctcgcaaaatagacttataatcgttgattttttaatttttccgggtggaccgtggccca-cccagcccatgaagggctccgccactg 45350051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 8461783 - 8461696
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||||||||||||||| ||||| ||| |||| |  ||||| |||| ||||||||| |||||||||||||| |||||||||    
T  8461783 tcgcaaaatagacctataatcgttaattttttaatttttccaggtgggtcgtgacccaccccagcccatgaagggctctgccactgat 8461696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 16718882 - 16718977
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  ||||||||||||||| |||| || ||||| |  ||||||||||||||||||||    
T  16718882 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatataacccgtgctaatgcacgggtcgatggtctagt 16718977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 17693092 - 17693187
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  ||||||||||||||| |||| || ||||| |  ||||||||||||||||||||    
T  17693092 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatataacccgtgctaatgcacgggtcgatggtctagt 17693187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 29322634 - 29322729
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    |||||||||||||| ||||||||||||||||||  | ||||  ||||||||||||||| |||||||  ||||| |||||||||| |||||| ||||    
T  29322634 acaattatgacattcatctaaactattttgttatctattaccgtcaaatattaccttccatatgaccggtgcgttagcacgggtagatggtttagt 29322729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 39703978 - 39703883
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| ||||||||||||||| ||| | ||||  ||| || |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  39703978 acaatcatgacattcatctaaactattttgctacctattaccgtcatattttaccttcgaaatgacccgtgcgttagcacgggtcgatggtctagt 39703883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 9624084 - 9624004
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt-tcgagtgggccgtggcccaccccatcccatgaagggct 81  Q
    |||||||||||||||||||||||||||||||||| ||| ||||  || ||||||||||||||| |||| |||||||||||||    
T  9624084 aatctcgcaaaatagacctataatcgttgattttttaatttttcccgggtgggccgtggccca-cccagcccatgaagggct 9624004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 29502202 - 29502287
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    ||||| |||||||| |||||| |||||| ||||| ||| ||||||| |||||| ||||||||||| | ||||||||||||||||||    
T  29502202 aatcttgcaaaatatacctattatcgttaattttttaaatttttcgggtgggctgtggcccaccctagcccatgaagggctccgcc 29502287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 40462404 - 40462315
Alignment:
Q  168 atgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    |||||||| |||||||||||||| ||||   ||||  ||||||||||||||  ||||||| |||||| ||||||||||||||||||||||    
T  40462404 atgacattcatctaaactattttattaccaattaccatcaaatattacctttcatatgacccgtgcgttagcacgggtcgatggtctagt 40462315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 16834354 - 16834433
Alignment:
Q  8 caaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    ||||||| ||||||||||||||||||| | | |||| ||  |||||| |||||||||||| |||||||||||||||||||    
T  16834354 caaaataaacctataatcgttgatttttttatttttccggatgggccatggcccaccccagcccatgaagggctccgcca 16834433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 26455241 - 26455312
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgc 233  Q
    ||||| |||||||||||||||||||||||||||  | ||||  ||||||||||||||||||||||| |||||    
T  26455241 acaatcatgacatttatctaaactattttgttatctattaccgtcaaatattaccttcgatatgacccgtgc 26455312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 19692553 - 19692467
Alignment:
Q  4 ctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||| |  |||| ||||| |||||||| |  |||| |||||| |||||||| ||||||||||||||||||||||    
T  19692553 ctcgcaaaatagacctacatccgttaattttttaacttttccaggtggaccgtggtccaccccagcccatgaagggctccgccactg 19692467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18104388 - 18104441
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 54  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  18104388 aatctcgcaaaatagacctataatcgttgattttttaatttttccgagtgggcc 18104441  T

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Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 29663015 - 29662931
Alignment:
Q  8 caaaatagacctataatcgttgattttct-aactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    ||||||||||||||  ||||| ||||| | || ||||||| ||||||||| |||||||| | |||||||||||||||||||||||    
T  29663015 caaaatagacctatggtcgttaatttttttaattttttcgggtgggccgtagcccaccctagcccatgaagggctccgccactga 29662931  T

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Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 40054378 - 40054298
Alignment:
Q  10 aaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||| ||||| ||||||||||||| |||  ||| |||||| |||||||||||||||| |||||| |||| ||||||||||    
T  40054378 aaataaacctagaatcgttgattttttaatctttccgagtgagccgtggcccaccccagcccatggagggttccgccactg 40054298  T

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Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 44142850 - 44142761
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||  |  ||||||  ||||||||| | ||||||||||||| ||||||||||    
T  44142850 aatctcgcaaaatatacctataatcgttgattttttaatttttctggatgggcc--ggcccacccgagcccatgaagggcttcgccactgat 44142761  T

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Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 34405149 - 34405054
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| || |||||||||||||||| | ||||  ||||||||||||||| |||| || ||| || |||||||  |||||||||||||    
T  34405149 acaatcatgacattcatttaaactattttgttacttattaccgtcaaatattaccttccatattacccgtacgttagcacgaatcgatggtctagt 34405054  T

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Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 41367747 - 41367666
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctcc 83  Q
    ||||||||||| ||||||||||||  |||||||| ||| |||| || |||  ||||||||||||||| |||||||||||||||    
T  41367747 aatctcgcaaattagacctataata-ttgattttttaatttttccgggtgaaccgtggcccaccccaacccatgaagggctcc 41367666  T

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Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22723846 - 22723900
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccg 55  Q
    ||||||||||| |||||||||||||||||||||| ||| |||| || ||||||||    
T  22723846 aatctcgcaaagtagacctataatcgttgattttttaatttttccgggtgggccg 22723900  T

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Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 31931981 - 31932015
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttc 35  Q
    |||||||||||||||||||||||||||||||||||    
T  31931981 aatctcgcaaaatagacctataatcgttgattttc 31932015  T

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Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 8727771 - 8727720
Alignment:
Q  40 tttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    ||||||| ||||| |||||||||||| | |||||||||||||||||| ||||    
T  8727771 tttttcgggtgggtcgtggcccaccctagcccatgaagggctccgcctctga 8727720  T

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Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 30781093 - 30781010
Alignment:
Q  7 gcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||| |||| |||| |||||| ||||| ||| ||||||   |||| |||||||||||| | ||||||||||||||| ||||||    
T  30781093 gcaaagtagatctatgatcgttaattttttaattttttcagatgggtcgtggcccaccctaacccatgaagggctccaccactg 30781010  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 24396536 - 24396474
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatat 224  Q
    ||||| |||||||| ||||||| ||||||||||| | ||||  ||||||||||||||| ||||    
T  24396536 acaatcatgacattcatctaaattattttgttacctattaccgtcaaatattaccttccatat 24396474  T

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Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31428825 - 31428783
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||    
T  31428825 aatcttgcaaaatagacctataatcgttgattttttaattttt 31428783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 2732881 - 2732828
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattac 215  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  |||||||||||    
T  2732881 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattac 2732828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 22499852 - 22499937
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||| |||||| ||||| ||| |||| || |||  ||||| |||| |||| | ||| |||||||| |||||||    
T  22499852 tcgcaaaatagacctatgatcgttaattttttaaattttccgggtgtaccgtgacccaacccagctcataaagggctctgccactg 22499937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 29075259 - 29075308
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 54  Q
    |||||||||||||||||| ||||||||||| ||| |||| || |||||||    
T  29075259 tcgcaaaatagacctatagtcgttgattttttaatttttccgggtgggcc 29075308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 9013895 - 9013819
Alignment:
Q  10 aaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    |||||||||||| || ||| ||||| ||| ||||  | || |||| | |||||||||| ||||||||||||||||||    
T  9013895 aaatagacctatgattgttaattttttaatttttctgggttggccattgcccaccccagcccatgaagggctccgcc 9013819  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 9014427 - 9014391
Alignment:
Q  54 cgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||| || ||||||||||||||||||||||    
T  9014427 cgtggcccaccacagcccatgaagggctccgccactg 9014391  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 20078065 - 20078113
Alignment:
Q  167 tatgacatttatctaaactattttgttacatgttactctcaaatattac 215  Q
    ||||||||| ||||||||||||||||||| | ||||  |||||||||||    
T  20078065 tatgacattcatctaaactattttgttacctattaccgtcaaatattac 20078113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 31065693 - 31065725
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattt 33  Q
    ||||||| |||||||||||||||||||||||||    
T  31065693 aatctcgtaaaatagacctataatcgttgattt 31065725  T

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Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 22674810 - 22674899
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||||||||| |||||||| ||||||||||||||||||||||    
T  22674810 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggtccaccccagcccatgaagggctccgccactg 22674899  T

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Target: chr2; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 13616033 - 13616124
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||| |||||||| | |||||||||||||    
T  13616033 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccaccccagcccatgaaagactccgccactgat 13616124  T

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Target: chr2; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34983364 - 34983277
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccac 88  Q
    ||||||||||||||||||||||||||||||||||  || |||| || |||||||||||||||||||| ||||||||||||||||||||    
T  34983364 aatctcgcaaaatagacctataatcgttgatttttcaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccac 34983277  T

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Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38527262 - 38527172
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||| ||||||||||||||||||||||||||| | | |||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  38527262 aatctcacaaaatagacctataatcgttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactga 38527172  T

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Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1115108 - 1115197
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||||||||||  |||||||| ||| |||| ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  1115108 aatctcgcaaaatagacctataataattgattttttaatttttccgagtggaccgtggcccaccccagcccatgaagggctccgccactg 1115197  T

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Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2249669 - 2249580
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||| |||||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||||    
T  2249669 aatctcgcaaaatagatctataatcattgattttttaattttttcgggtgggtcgtggcccaccccagcccatgaagggctccgccactg 2249580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23869751 - 23869662
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||||||||| ||| ||||  | |||||||||||||||||||| |||||| |||||||||||||||    
T  23869751 aatctcgcaaaatagacctataatcgttgattttttaatttttcggggtgggccgtggcccaccccagcccatggagggctccgccactg 23869662  T

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Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38763802 - 38763713
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||| ||||||||||||||||||||||||| ||| |||| || ||||||||||||||||| || ||||||||||||||||||||||    
T  38763802 aatctcgctaaatagacctataatcgttgattttttaatttttccgggtgggccgtggcccacctcagcccatgaagggctccgccactg 38763713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 44545803 - 44545890
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgat 92  Q
    |||||||||||||||||||||||||||||| | | |||| || |||| ||||||||||||||| ||||||||||||||||||||||||    
T  44545803 tcgcaaaatagacctataatcgttgatttttttatttttccgggtggaccgtggcccaccccaacccatgaagggctccgccactgat 44545890  T

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Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 6750085 - 6750166
Alignment:
Q  10 aaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||||||||||||||||||||||  || |||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  6750085 aaatagacctataatcgttgatttttaaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactga 6750166  T

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Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 36436256 - 36436341
Alignment:
Q  5 tcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||| |||||||||| ||||| ||| ||||| | |||||||||||||||||||| ||||||||||||||||||||||    
T  36436256 tcgcaaaatagacttataatcgttaattttttaatttttttgggtgggccgtggcccaccccagcccatgaagggctccgccactg 36436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28745562 - 28745653
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttc--gagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||||||||| ||||| ||| |||  |  | |||||||||||||||||||| ||||||||||||||||||||||    
T  28745562 aatctcgcaaaatagacctataatcgttaattttttaattttcccgggggtgggccgtggcccaccccagcccatgaagggctccgccactg 28745653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1021138 - 1021229
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt-tcgagtggg-ccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    ||||||||||||||||||||||||  |||||||| ||| |||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||    
T  1021138 aatctcgcaaaatagacctataataattgattttttaatttttctcgggtggggccgtggcccaccccagcccatgaagggctccgccactg 1021229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 37995369 - 37995464
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||||||||||||||||||||||| |  |||  ||||||||||||||| ||||||  |||| | ||||||||||||||||||||||    
T  37995369 acaatcatgacatttatctaaactattttgttacctactaccgtcaaatattaccttccatatgatccgtgtgttagcacgggtcgatggtctagt 37995464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7366239 - 7366150
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||||| ||||||||||| | | |||||||  |||||||||||||||| || ||||| || |||||||||||||    
T  7366239 aatctcgcaaaatagacctatagtcgttgatttttttattttttcggatgggccgtggcccacctcagcccataaaaggctccgccactg 7366150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17526096 - 17526177
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctc 82  Q
    |||||||||||||||| ||||||||||| |||||  ||||||||| ||||||  ||||||||||||| ||||||||||||||    
T  17526096 aatctcgcaaaatagatctataatcgttaattttgcaactttttcaagtgggttgtggcccaccccagcccatgaagggctc 17526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 41699272 - 41699185
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccac 88  Q
    |||||||||||||| ||||||||||||||||||| ||| |||| ||  ||||||||| ||||||| | |||||| |||||||||||||    
T  41699272 aatctcgcaaaatatacctataatcgttgattttttaatttttccggatgggccgtgacccacccgagcccatggagggctccgccac 41699185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 181 - 258
Target Start/End: Complemental strand, 12008555 - 12008478
Alignment:
Q  181 aaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagtt 258  Q
    ||||||||||||||  | ||||| ||||||||||||||||||||||| |||| | ||||||||||| |||||||||||    
T  12008555 aaactattttgttatctattactgtcaaatattaccttcgatatgacccgtgtgttagcacgggtcaatggtctagtt 12008478  T

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Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34494545 - 34494634
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||  |  ||| ||||||||||||| | ||||||| ||||||||||||||    
T  34494545 aatctcgcaaaagagacctataatcgttgattttttaatttttctggatggaccgtggcccaccctagcccatgatgggctccgccactg 34494634  T

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Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 10128652 - 10128587
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgac 227  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  |||||||||||||||||||||||    
T  10128652 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttcgatatgac 10128587  T

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Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 25882733 - 25882661
Alignment:
Q  182 aactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtct 254  Q
    |||||||||||||| | ||||  |||||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  25882733 aactattttgttacctattaccgtcaaatattaccttcgatatgacatgtgcgttagcacgggttgatggtct 25882661  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43471524 - 43471578
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccg 55  Q
    |||||||||||||||||||||||||||||||||| ||| |||| || ||||||||    
T  43471524 aatctcgcaaaatagacctataatcgttgattttttaatttttccgggtgggccg 43471578  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 40897731 - 40897816
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    |||||||| ||||| ||||||||||| | ||||| | | ||||||| ||||| |||||||||||||| ||||| ||||||| ||||    
T  40897731 aatctcgcgaaataaacctataatcgctaatttttttattttttcgggtgggtcgtggcccaccccaacccataaagggcttcgcc 40897816  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26293248 - 26293195
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggcc 54  Q
    |||||||||||||||||||||||||||| ||||| ||| |||| || |||||||    
T  26293248 aatctcgcaaaatagacctataatcgttaattttttaatttttccgggtgggcc 26293195  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 42473610 - 42473557
Alignment:
Q  40 tttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactgatg 93  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||| | ||||||    
T  42473610 tttttcgggtgagccgtggcccaccccagcccatgaagggctccgaccctgatg 42473557  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 9467604 - 9467557
Alignment:
Q  39 ctttttcgagtgggccgtggcccaccccatcccatgaagggctccgcc 86  Q
    ||||||||  |||||||||||||| |||||||||||||||||| ||||    
T  9467604 ctttttcggatgggccgtggcccatcccatcccatgaagggctacgcc 9467557  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12995054 - 12994975
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccact 89  Q
    ||||||||||| |||||||||||||||||||||| ||| |||||| |         ||||||||||| |||||||||||||||||||||    
T  12995054 aatctcgcaaattagacctataatcgttgattttttaa-tttttcta--------cggcccaccccagcccatgaagggctccgccact 12994975  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11764882 - 11764840
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||    
T  11764882 aatcttgcaaaatagacctataatcgttgattttttaattttt 11764840  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26860732 - 26860774
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttt 43  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||    
T  26860732 aatctcgcaaaatagacctataattgttgattttttaattttt 26860774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16194340 - 16194307
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgatttt 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  16194340 aatctcgcaaaatagacttataatcgttgatttt 16194307  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27640715 - 27640634
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctc 82  Q
    |||||||||||||| |||||  ||||||  |||| ||| |||| | | |||| |||||||||||||| ||||| ||||||||    
T  27640715 aatctcgcaaaataaacctaggatcgttagttttttaatttttcctaatgggtcgtggcccaccccagcccataaagggctc 27640634  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42016591 - 42016558
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgatttt 34  Q
    |||||| |||||||||||||||||||||||||||    
T  42016591 aatctcacaaaatagacctataatcgttgatttt 42016558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 65022 - 64932
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    ||||||||||||||||||||||| ||||| |||| ||| |||| || |||||||||||||||||||| |||||||||||||||||||||||    
T  65022 aatctcgcaaaatagacctataagcgttgtttttttaatttttccgggtgggccgtggcccaccccagcccatgaagggctccgccactga 64932  T

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Target: scaffold0050 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 19134 - 19048
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgcca 87  Q
    ||||||||||||||||||||| |||||||||||| | | |||| || |||||||||||||||||||| |||||||||||||||||||    
T  19134 aatctcgcaaaatagacctatgatcgttgatttttttatttttccgggtgggccgtggcccaccccagcccatgaagggctccgcca 19048  T

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Target: scaffold0891 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 1354 - 1259
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| ||||||||||||||||||  | ||||| ||||||||||||||| ||||||| |||||| |||||||| |||||||||||||    
T  1354 acaatcatgacattcatctaaactattttgttatctattactgtcaaatattaccttccatatgacccgtgcgttagcacggatcgatggtctagt 1259  T

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Target: scaffold0210 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 17760 - 17835
Alignment:
Q  182 aactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    |||||||||||||||| ||||  ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  17760 aactattttgttacatattaccgtcaaatattaccttcgaaatgactcgtgcattagcacgggtcgatggtctagt 17835  T

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Target: scaffold0210; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 25652 - 25727
Alignment:
Q  182 aactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    |||||||||||||||| ||||  ||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  25652 aactattttgttacatattaccgtcaaatattaccttcgaaatgactcgtgcattagcacgggtcgatggtctagt 25727  T

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Target: scaffold0044 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 87829 - 87924
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| |||||||| ||||||||||||||||||||| ||||  |||||||||| |||  |||||||||||||| ||||| || ||||| |||||||    
T  87829 acaatcatgacattcatctaaactattttgttacatattaccgtcaaatattatctttcatatgactcgtgcgttagcaaggatcgatagtctagt 87924  T

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Target: scaffold0090 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 12683 - 12588
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||| ||| |||| || |||||||||||||||| | ||||  ||||||||||| ||| ||||||| |||||  ||||||||||||||||||||||    
T  12683 acaatcatgtcattcatttaaactattttgttacctattaccgtcaaatattacattccatatgacccgtgcattagcacgggtcgatggtctagt 12588  T

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Target: scaffold1155 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 156 - 68
Alignment:
Q  169 tgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||||| ||||||||||||| ||||| | ||||  || ||||||||||||||||| || |||||| |||||  |||||||||||||||    
T  156 tgacattcatctaaactatttagttacctattaccgtctaatattaccttcgatataacccgtgcgttagcagcggtcgatggtctagt 68  T

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Target: scaffold0642 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 150 - 238
Alignment:
Q  169 tgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||||| ||||||||||||| ||||| | ||||  || ||||||||||||||||| || |||||| |||||  |||||||||||||||    
T  150 tgacattcatctaaactatttagttacctattaccgtctaatattaccttcgatataacccgtgcgttagcagcggtcgatggtctagt 238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 10061 - 10149
Alignment:
Q  169 tgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||||| ||||||||||||| ||||| | ||||  || ||||||||||||||||| || |||||| |||||  |||||||||||||||    
T  10061 tgacattcatctaaactatttagttacctattaccgtctaatattaccttcgatataacccgtgcgttagcagcggtcgatggtctagt 10149  T

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Target: scaffold0105 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 28919 - 28831
Alignment:
Q  169 tgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||||| ||||||||||||| ||||| | ||||  || ||||||||||||||||| || |||||| |||||  |||||||||||||||    
T  28919 tgacattcatctaaactatttagttacctattaccgtctaatattaccttcgatataacccgtgcgttagcagcggtcgatggtctagt 28831  T

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Target: scaffold0131 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 11208 - 11166
Alignment:
Q  48 gtgggccgtggcccaccccatcccatgaagggctccgccactg 90  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  11208 gtgggccgtggcccaccccagcccatgaagggctccgccactg 11166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 303888 - 303977
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgattttctaactttttcgagtgggccgtggcccaccccatcccatgaagggctccgccactga 91  Q
    |||||| ||||||| | || |||||||| ||||| ||| |||| ||||||||||||| ||||||| | |||||||||||||||||| ||||    
T  303888 aatctcacaaaataaatctttaatcgttaatttt-taatttttccgagtgggccgtgacccaccctagcccatgaagggctccgcctctga 303977  T

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Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 8891 - 8829
Alignment:
Q  162 acaattatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatat 224  Q
    ||||| |||||||| ||||||||||||||||||| | ||||  ||||||||||||||| ||||    
T  8891 acaatcatgacattcatctaaactattttgttacctattaccgtcaaatattaccttccatat 8829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 13691 - 13602
Alignment:
Q  167 tatgacatttatctaaactattttgttacatgttactctcaaatattaccttcgatatgactcgtgcgatagcacgggtcgatggtctagt 257  Q
    ||||||| | ||||||||||||||||||  | ||||  |||||||| | ||||||||| ||  ||||| ||||||||||||||||||||||    
T  13691 tatgacaatcatctaaactattttgttatctattaccatcaaatat-atcttcgatataacctgtgcgttagcacgggtcgatggtctagt 13602  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 331860 - 331827
Alignment:
Q  1 aatctcgcaaaatagacctataatcgttgatttt 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  331860 aatcttgcaaaatagacctataatcgttgatttt 331827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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