View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5599-Insertion-3 (Length: 1030)

Name: NF5599-Insertion-3
Description: NF5599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5599-Insertion-3
NF5599-Insertion-3
[»] chr4 (73 HSPs)
chr4 (281-1030)||(24834624-24835352)
chr4 (8-285)||(24834323-24834601)
chr4 (282-409)||(39471204-39471338)
chr4 (282-409)||(26361307-26361441)
chr4 (282-409)||(43771173-43771307)
chr4 (282-414)||(8109003-8109142)
chr4 (281-401)||(722203-722330)
chr4 (282-409)||(24938414-24938548)
chr4 (281-402)||(754586-754714)
chr4 (283-409)||(50164443-50164576)
chr4 (281-414)||(49242216-49242356)
chr4 (326-406)||(20454636-20454716)
chr4 (326-406)||(47009287-47009367)
chr4 (330-404)||(40991593-40991667)
chr4 (282-415)||(49077296-49077436)
chr4 (282-414)||(22542428-22542567)
chr4 (326-409)||(11895135-11895219)
chr4 (283-409)||(31250881-31251015)
chr4 (326-398)||(37451023-37451095)
chr4 (285-415)||(34129393-34129530)
chr4 (283-415)||(43124507-43124646)
chr4 (283-386)||(33653511-33653621)
chr4 (281-404)||(52671876-52672006)
chr4 (284-397)||(25719123-25719244)
chr4 (285-415)||(45310941-45311078)
chr4 (326-409)||(52279258-52279341)
chr4 (337-407)||(19447241-19447311)
chr4 (282-366)||(20225383-20225474)
chr4 (281-400)||(19937180-19937306)
chr4 (328-407)||(51904616-51904696)
chr4 (328-407)||(45081743-45081822)
chr4 (282-385)||(29699536-29699645)
chr4 (328-409)||(38537512-38537593)
chr4 (282-409)||(39016710-39016845)
chr4 (281-380)||(5044568-5044674)
chr4 (355-415)||(8108951-8109011)
chr4 (281-415)||(30866924-30867066)
chr4 (326-405)||(46536267-46536344)
chr4 (282-369)||(50481584-50481678)
chr4 (348-407)||(27654598-27654657)
chr4 (363-414)||(37315559-37315610)
chr4 (335-405)||(10169648-10169718)
chr4 (356-414)||(13070069-13070127)
chr4 (355-409)||(27654478-27654532)
chr4 (355-413)||(40812034-40812092)
chr4 (363-413)||(40991722-40991772)
chr4 (295-408)||(48339340-48339460)
chr4 (329-410)||(19933474-19933555)
chr4 (282-407)||(43958198-43958327)
chr4 (355-412)||(47237866-47237923)
chr4 (355-412)||(51206171-51206228)
chr4 (336-404)||(5545687-5545755)
chr4 (355-399)||(24106772-24106816)
chr4 (326-413)||(37586460-37586548)
chr4 (282-330)||(46242029-46242077)
chr4 (355-415)||(51475157-51475217)
chr4 (365-413)||(53870998-53871046)
chr4 (337-407)||(19321879-19321947)
chr4 (281-328)||(42862508-42862555)
chr4 (355-410)||(43771126-43771181)
chr4 (348-405)||(25719231-25719286)
chr4 (355-409)||(39016664-39016718)
chr4 (377-415)||(39471152-39471190)
chr4 (355-413)||(42862415-42862473)
chr4 (346-416)||(48608074-48608144)
chr4 (354-415)||(13069936-13069997)
chr4 (356-413)||(22158406-22158463)
chr4 (357-410)||(30033341-30033394)
chr4 (349-414)||(31699473-31699538)
chr4 (338-399)||(31699588-31699649)
chr4 (364-413)||(33653623-33653672)
chr4 (341-409)||(34961762-34961828)
chr4 (376-413)||(44832612-44832649)
[»] chr5 (47 HSPs)
chr5 (782-1008)||(12318721-12318949)
chr5 (281-403)||(28490727-28490856)
chr5 (259-409)||(5413733-5413892)
chr5 (298-413)||(34368423-34368545)
chr5 (282-409)||(41105569-41105703)
chr5 (282-399)||(30325883-30326007)
chr5 (295-409)||(37455409-37455533)
chr5 (282-386)||(10141998-10142109)
chr5 (329-409)||(17434849-17434928)
chr5 (326-386)||(25710494-25710554)
chr5 (284-370)||(39246657-39246750)
chr5 (326-409)||(28434821-28434900)
chr5 (282-398)||(34384701-34384824)
chr5 (329-381)||(14553613-14553665)
chr5 (326-410)||(28223774-28223858)
chr5 (329-409)||(28611777-28611857)
chr5 (355-413)||(4959275-4959333)
chr5 (337-407)||(12076063-12076133)
chr5 (328-413)||(25002000-25002086)
chr5 (282-407)||(27592453-27592585)
chr5 (328-386)||(43405493-43405551)
chr5 (335-404)||(5465656-5465725)
chr5 (282-386)||(17537124-17537235)
chr5 (282-409)||(41330394-41330526)
chr5 (357-414)||(42224718-42224775)
chr5 (290-401)||(25919266-25919384)
chr5 (355-415)||(26072231-26072291)
chr5 (346-413)||(1649547-1649614)
chr5 (344-395)||(2935445-2935496)
chr5 (281-407)||(4714795-4714928)
chr5 (333-404)||(10666692-10666763)
chr5 (346-413)||(32309477-32309544)
chr5 (356-415)||(40971579-40971638)
chr5 (328-414)||(41034423-41034510)
chr5 (263-328)||(25564033-25564099)
chr5 (328-409)||(36337886-36337970)
chr5 (355-413)||(40971447-40971505)
chr5 (348-409)||(26227007-26227068)
chr5 (282-413)||(42224585-42224724)
chr5 (339-407)||(2201589-2201657)
chr5 (363-415)||(6264017-6264069)
chr5 (363-407)||(32401253-32401297)
chr5 (355-414)||(4959406-4959465)
chr5 (346-413)||(17568696-17568763)
chr5 (282-328)||(13456252-13456298)
chr5 (355-409)||(30892235-30892289)
chr5 (348-409)||(5990518-5990579)
[»] chr7 (74 HSPs)
chr7 (566-750)||(29810584-29810767)
chr7 (896-1030)||(29809310-29809445)
chr7 (286-413)||(27888333-27888467)
chr7 (285-409)||(27949323-27949454)
chr7 (282-415)||(22189986-22190126)
chr7 (337-408)||(6580002-6580073)
chr7 (282-415)||(11824118-11824256)
chr7 (283-409)||(46517339-46517472)
chr7 (328-407)||(48374440-48374519)
chr7 (282-386)||(12263458-12263569)
chr7 (282-415)||(33008151-33008288)
chr7 (283-409)||(6442213-6442346)
chr7 (282-405)||(11692226-11692356)
chr7 (326-409)||(25686834-25686917)
chr7 (281-409)||(14795177-14795310)
chr7 (281-409)||(15242169-15242302)
chr7 (282-402)||(32205123-32205250)
chr7 (282-409)||(7775047-7775180)
chr7 (333-409)||(39254188-39254264)
chr7 (326-409)||(44350801-44350884)
chr7 (282-406)||(32212872-32213002)
chr7 (282-368)||(31502504-31502597)
chr7 (326-409)||(7459441-7459524)
chr7 (333-404)||(36845495-36845566)
chr7 (337-407)||(17749804-17749874)
chr7 (337-407)||(24539123-24539193)
chr7 (348-406)||(38065328-38065386)
chr7 (329-386)||(31874117-31874174)
chr7 (280-407)||(45909501-45909636)
chr7 (283-413)||(13919828-13919966)
chr7 (329-401)||(27320475-27320547)
chr7 (365-413)||(42863569-42863617)
chr7 (327-393)||(7774944-7775009)
chr7 (336-386)||(12167315-12167365)
chr7 (330-392)||(19422850-19422912)
chr7 (782-847)||(29809481-29809544)
chr7 (355-413)||(31502589-31502647)
chr7 (329-414)||(31628100-31628185)
chr7 (329-409)||(31759864-31759942)
chr7 (328-404)||(46994366-46994443)
chr7 (355-415)||(19840877-19840937)
chr7 (342-414)||(33008100-33008172)
chr7 (348-407)||(20954800-20954859)
chr7 (282-411)||(26703436-26703573)
chr7 (333-404)||(30742544-30742615)
chr7 (355-413)||(2520630-2520688)
chr7 (282-328)||(17354614-17354660)
chr7 (355-413)||(17354652-17354710)
chr7 (355-417)||(22189932-22189994)
chr7 (355-409)||(24539248-24539302)
chr7 (355-413)||(27888279-27888337)
chr7 (374-415)||(10619535-10619576)
chr7 (355-416)||(26190031-26190092)
chr7 (356-416)||(25428605-25428665)
chr7 (326-386)||(32178826-32178886)
chr7 (355-413)||(32205076-32205131)
chr7 (353-413)||(37549621-37549681)
chr7 (378-413)||(2520738-2520773)
chr7 (364-407)||(12271109-12271152)
chr7 (346-413)||(14759762-14759829)
chr7 (365-412)||(22786149-22786196)
chr7 (282-389)||(28713063-28713170)
chr7 (348-399)||(37490023-37490074)
chr7 (355-409)||(17749695-17749749)
chr7 (282-328)||(19494426-19494472)
chr7 (363-413)||(27949270-27949320)
chr7 (335-381)||(31731282-31731328)
chr7 (342-379)||(1316387-1316424)
chr7 (348-409)||(2911882-2911943)
chr7 (355-412)||(19494464-19494521)
chr7 (374-407)||(35549650-35549683)
chr7 (326-363)||(36845567-36845604)
chr7 (357-418)||(42815685-42815746)
chr7 (338-399)||(43930068-43930129)
[»] scaffold0018 (1 HSPs)
scaffold0018 (282-417)||(27859-28001)
[»] chr3 (73 HSPs)
chr3 (282-409)||(41451894-41452028)
chr3 (283-414)||(18427146-18427282)
chr3 (282-409)||(24734752-24734886)
chr3 (282-407)||(46450112-46450244)
chr3 (287-409)||(52123955-52124084)
chr3 (283-401)||(20493452-20493577)
chr3 (282-401)||(28529300-28529424)
chr3 (282-409)||(37776702-37776836)
chr3 (282-407)||(20791343-20791475)
chr3 (282-415)||(27243092-27243233)
chr3 (282-414)||(5452056-5452193)
chr3 (282-404)||(8824983-8825112)
chr3 (282-407)||(14236066-14236198)
chr3 (282-386)||(55452037-55452148)
chr3 (326-409)||(29588732-29588815)
chr3 (329-399)||(50156669-50156739)
chr3 (283-408)||(15790370-15790501)
chr3 (282-398)||(46160994-46161117)
chr3 (296-394)||(38414708-38414813)
chr3 (355-416)||(27243039-27243100)
chr3 (304-413)||(752461-752575)
chr3 (282-415)||(37600122-37600263)
chr3 (283-404)||(2419468-2419596)
chr3 (326-400)||(29755598-29755672)
chr3 (329-413)||(742057-742139)
chr3 (490-562)||(44815222-44815297)
chr3 (355-415)||(28529248-28529308)
chr3 (329-404)||(37285384-37285457)
chr3 (326-413)||(29388589-29388676)
chr3 (326-401)||(38138589-38138664)
chr3 (329-416)||(41707433-41707518)
chr3 (363-410)||(52951376-52951423)
chr3 (355-413)||(20493570-20493628)
chr3 (329-383)||(24429050-24429104)
chr3 (296-404)||(24748913-24749029)
chr3 (282-359)||(26310495-26310579)
chr3 (329-414)||(44844082-44844168)
chr3 (355-413)||(46575945-46576003)
chr3 (355-413)||(52951485-52951543)
chr3 (329-406)||(2009095-2009172)
chr3 (282-413)||(13809128-13809267)
chr3 (335-403)||(49418424-49418493)
chr3 (326-386)||(41387659-41387719)
chr3 (329-380)||(10948588-10948639)
chr3 (355-410)||(38928006-38928061)
chr3 (328-407)||(39186064-39186143)
chr3 (326-361)||(49072103-49072138)
chr3 (357-408)||(50661649-50661700)
chr3 (355-413)||(5452185-5452243)
chr3 (283-376)||(19345032-19345132)
chr3 (374-416)||(29775133-29775175)
chr3 (348-414)||(43016533-43016599)
chr3 (282-328)||(46237133-46237179)
chr3 (283-320)||(18722535-18722572)
chr3 (338-415)||(48543252-48543329)
chr3 (374-414)||(10769869-10769909)
chr3 (373-409)||(13809083-13809119)
chr3 (355-399)||(29235658-29235702)
chr3 (355-415)||(41452020-41452080)
chr3 (282-409)||(48351483-48351617)
chr3 (355-399)||(54187055-54187099)
chr3 (357-416)||(37776830-37776889)
chr3 (366-409)||(55283108-55283151)
chr3 (355-413)||(24734702-24734760)
chr3 (355-413)||(37600255-37600313)
chr3 (284-407)||(46575997-46576126)
chr3 (348-414)||(53655400-53655466)
chr3 (355-413)||(54140887-54140945)
chr3 (372-409)||(22606909-22606946)
chr3 (326-410)||(22856234-22856316)
chr3 (357-398)||(38602820-38602861)
chr3 (348-409)||(43657872-43657933)
chr3 (377-414)||(46450063-46450100)
[»] chr6 (40 HSPs)
chr6 (282-408)||(34905383-34905516)
chr6 (281-400)||(32112725-32112851)
chr6 (281-409)||(5106344-5106479)
chr6 (281-409)||(1392674-1392808)
chr6 (326-406)||(16851975-16852055)
chr6 (282-416)||(32598940-32599081)
chr6 (281-386)||(445864-445976)
chr6 (282-407)||(21987339-21987471)
chr6 (285-386)||(31116146-31116254)
chr6 (326-409)||(16187433-16187514)
chr6 (326-409)||(16187651-16187732)
chr6 (332-414)||(12753754-12753836)
chr6 (326-401)||(10133165-10133240)
chr6 (295-409)||(16436125-16436245)
chr6 (282-415)||(19090207-19090348)
chr6 (326-400)||(8441857-8441931)
chr6 (326-400)||(8450661-8450735)
chr6 (281-394)||(12780773-12780893)
chr6 (282-386)||(2675942-2676053)
chr6 (282-394)||(17144685-17144804)
chr6 (338-415)||(32439471-32439548)
chr6 (283-386)||(32122843-32122953)
chr6 (282-328)||(12327292-12327338)
chr6 (363-407)||(19305789-19305833)
chr6 (355-411)||(19737431-19737487)
chr6 (355-409)||(34905337-34905391)
chr6 (346-415)||(12690247-12690316)
chr6 (357-413)||(10060856-10060912)
chr6 (342-410)||(10133270-10133338)
chr6 (355-407)||(35128848-35128900)
chr6 (326-409)||(12784938-12785021)
chr6 (355-413)||(6531423-6531481)
chr6 (355-413)||(8441962-8442020)
chr6 (355-413)||(8450766-8450824)
chr6 (355-413)||(10060987-10061045)
chr6 (355-413)||(19090340-19090398)
chr6 (348-409)||(13001812-13001873)
chr6 (343-384)||(20128798-20128839)
chr6 (343-384)||(22204031-22204072)
chr6 (348-413)||(29610355-29610420)
[»] chr8 (51 HSPs)
chr8 (282-409)||(34861191-34861320)
chr8 (326-409)||(16983492-16983575)
chr8 (282-409)||(35151728-35151862)
chr8 (284-401)||(36804846-36804970)
chr8 (326-415)||(6098770-6098859)
chr8 (282-409)||(17499234-17499366)
chr8 (287-409)||(1977172-1977301)
chr8 (281-413)||(13407318-13407458)
chr8 (281-415)||(13214541-13214682)
chr8 (326-401)||(24055932-24056007)
chr8 (285-406)||(5979930-5980057)
chr8 (272-380)||(43506572-43506687)
chr8 (283-415)||(8903900-8904039)
chr8 (282-386)||(32072144-32072255)
chr8 (281-404)||(9952762-9952891)
chr8 (326-397)||(7493353-7493424)
chr8 (342-415)||(5095753-5095826)
chr8 (281-409)||(28413869-28414003)
chr8 (282-415)||(6387608-6387749)
chr8 (298-386)||(8914834-8914929)
chr8 (329-386)||(14236439-14236496)
chr8 (282-407)||(23685178-23685306)
chr8 (342-402)||(17915926-17915986)
chr8 (295-386)||(41727490-41727588)
chr8 (283-383)||(17741552-17741659)
chr8 (338-399)||(28700564-28700625)
chr8 (348-413)||(38091471-38091536)
chr8 (326-401)||(4675004-4675079)
chr8 (349-408)||(8671070-8671129)
chr8 (326-409)||(9193480-9193563)
chr8 (282-400)||(31301162-31301286)
chr8 (282-359)||(3099691-3099775)
chr8 (371-413)||(34952458-34952500)
chr8 (372-409)||(1961402-1961439)
chr8 (342-399)||(5727346-5727403)
chr8 (359-415)||(11574160-11574216)
chr8 (326-409)||(11962681-11962763)
chr8 (328-406)||(12212126-12212205)
chr8 (328-406)||(12456554-12456633)
chr8 (356-411)||(31691637-31691692)
chr8 (281-328)||(35689526-35689573)
chr8 (328-407)||(45246534-45246613)
chr8 (363-413)||(1977306-1977356)
chr8 (363-413)||(8914768-8914818)
chr8 (348-414)||(24683692-24683758)
chr8 (355-409)||(32072098-32072152)
chr8 (333-415)||(34952548-34952630)
chr8 (354-415)||(39023506-39023565)
chr8 (281-330)||(10868037-10868086)
chr8 (282-327)||(17716898-17716943)
chr8 (292-383)||(31895324-31895412)
[»] chr2 (68 HSPs)
chr2 (286-407)||(12989242-12989370)
chr2 (286-413)||(44274285-44274419)
chr2 (282-408)||(9470128-9470260)
chr2 (281-407)||(38464209-38464342)
chr2 (282-418)||(26767751-26767894)
chr2 (282-401)||(45554614-45554732)
chr2 (282-409)||(6980119-6980253)
chr2 (299-413)||(10981582-10981701)
chr2 (326-407)||(25238278-25238359)
chr2 (326-405)||(11539523-11539603)
chr2 (336-416)||(19193494-19193574)
chr2 (326-405)||(4552843-4552922)
chr2 (329-408)||(14489539-14489618)
chr2 (326-404)||(30718331-30718409)
chr2 (333-409)||(35316400-35316476)
chr2 (326-409)||(32856134-32856217)
chr2 (326-409)||(36471837-36471920)
chr2 (281-417)||(24497238-24497379)
chr2 (355-415)||(41546152-41546212)
chr2 (336-407)||(30706378-30706449)
chr2 (336-406)||(6420456-6420526)
chr2 (356-414)||(15508910-15508968)
chr2 (326-396)||(15884527-15884597)
chr2 (282-410)||(28898034-28898170)
chr2 (281-406)||(34142141-34142273)
chr2 (326-415)||(19639191-19639280)
chr2 (326-415)||(19837784-19837873)
chr2 (355-416)||(45554561-45554622)
chr2 (336-400)||(17460974-17461038)
chr2 (355-415)||(18511334-18511394)
chr2 (355-415)||(28898162-28898222)
chr2 (355-415)||(37228493-37228553)
chr2 (340-415)||(472156-472231)
chr2 (355-410)||(42182889-42182944)
chr2 (282-415)||(42182936-42183077)
chr2 (328-409)||(19953495-19953577)
chr2 (332-386)||(33678138-33678192)
chr2 (356-410)||(37398940-37398994)
chr2 (356-413)||(1110195-1110252)
chr2 (326-367)||(7919311-7919352)
chr2 (282-413)||(15508961-15509100)
chr2 (355-407)||(31494211-31494261)
chr2 (281-409)||(43414401-43414535)
chr2 (282-330)||(18511294-18511342)
chr2 (346-410)||(19190630-19190694)
chr2 (355-407)||(20459031-20459083)
chr2 (346-409)||(27968919-27968982)
chr2 (346-409)||(28091605-28091668)
chr2 (346-409)||(28101837-28101900)
chr2 (356-403)||(42579661-42579708)
chr2 (355-409)||(4964671-4964725)
chr2 (355-409)||(5139969-5140023)
chr2 (355-413)||(6315786-6315844)
chr2 (355-409)||(6980245-6980299)
chr2 (377-415)||(12989186-12989224)
chr2 (355-413)||(36471963-36472021)
chr2 (355-413)||(37719831-37719889)
chr2 (355-413)||(41805901-41805959)
chr2 (355-397)||(43400146-43400188)
chr2 (342-383)||(80403-80444)
chr2 (348-405)||(2122915-2122972)
chr2 (326-409)||(12098867-12098949)
chr2 (377-410)||(19427392-19427425)
chr2 (356-413)||(23463952-23464009)
chr2 (374-415)||(26767905-26767946)
chr2 (326-379)||(27494480-27494533)
chr2 (348-409)||(43400254-43400315)
chr2 (348-409)||(44152352-44152412)
[»] chr1 (75 HSPs)
chr1 (326-415)||(8899112-8899201)
chr1 (295-413)||(30678906-30679031)
chr1 (326-415)||(11987724-11987813)
chr1 (284-408)||(26980262-26980393)
chr1 (283-386)||(41958131-41958241)
chr1 (283-409)||(39974199-39974326)
chr1 (282-409)||(6133624-6133757)
chr1 (283-386)||(33193098-33193208)
chr1 (282-406)||(2225271-2225402)
chr1 (281-405)||(8741226-8741357)
chr1 (281-415)||(10659762-10659902)
chr1 (282-409)||(28218045-28218181)
chr1 (282-407)||(19101602-19101734)
chr1 (282-413)||(931421-931559)
chr1 (334-413)||(16948524-16948603)
chr1 (282-404)||(32211788-32211917)
chr1 (326-409)||(41948145-41948228)
chr1 (282-413)||(25543387-25543524)
chr1 (282-417)||(15928602-15928742)
chr1 (282-386)||(29673522-29673633)
chr1 (281-417)||(28109914-28110057)
chr1 (263-396)||(15468247-15468388)
chr1 (329-407)||(12767329-12767407)
chr1 (355-413)||(26980387-26980445)
chr1 (326-408)||(51732375-51732456)
chr1 (282-407)||(15523257-15523385)
chr1 (282-407)||(15531251-15531379)
chr1 (282-407)||(22540415-22540543)
chr1 (342-415)||(32848695-32848768)
chr1 (326-411)||(33114069-33114154)
chr1 (357-413)||(25543337-25543393)
chr1 (329-409)||(27570326-27570406)
chr1 (326-397)||(37552962-37553031)
chr1 (282-415)||(11135786-11135927)
chr1 (354-413)||(11430567-11430626)
chr1 (348-407)||(21466621-21466680)
chr1 (355-413)||(13388331-13388389)
chr1 (371-413)||(13889287-13889329)
chr1 (361-407)||(39019700-39019746)
chr1 (356-413)||(931371-931428)
chr1 (338-407)||(13114670-13114739)
chr1 (333-386)||(35336965-35337018)
chr1 (295-409)||(6325816-6325932)
chr1 (355-415)||(11135734-11135794)
chr1 (355-399)||(28274797-28274841)
chr1 (329-405)||(33059896-33059972)
chr1 (328-407)||(50424866-50424946)
chr1 (350-405)||(18157159-18157214)
chr1 (281-407)||(28941868-28942000)
chr1 (342-405)||(33113976-33114039)
chr1 (363-413)||(44739115-44739165)
chr1 (326-384)||(45179270-45179328)
chr1 (376-413)||(39019572-39019609)
chr1 (355-415)||(11430436-11430496)
chr1 (357-409)||(13114797-13114849)
chr1 (263-399)||(15660920-15661063)
chr1 (355-415)||(29068206-29068266)
chr1 (365-413)||(41095603-41095651)
chr1 (363-410)||(3872766-3872813)
chr1 (281-328)||(14094088-14094135)
chr1 (348-407)||(21970278-21970337)
chr1 (355-410)||(41917995-41918050)
chr1 (355-414)||(43851160-43851219)
chr1 (346-409)||(50773109-50773172)
chr1 (355-413)||(6133749-6133807)
chr1 (282-328)||(11430488-11430534)
chr1 (326-399)||(18473747-18473821)
chr1 (332-386)||(29673678-29673732)
chr1 (355-409)||(41095734-41095788)
chr1 (355-407)||(4578702-4578752)
chr1 (346-415)||(18157033-18157102)
chr1 (355-400)||(30787403-30787448)
chr1 (355-412)||(39039480-39039537)
chr1 (376-409)||(43527275-43527308)
chr1 (326-359)||(49730962-49730995)
[»] scaffold0543 (1 HSPs)
scaffold0543 (281-365)||(9710-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (281-365)||(11256-11347)
[»] scaffold0016 (1 HSPs)
scaffold0016 (333-409)||(204707-204783)
[»] scaffold0008 (1 HSPs)
scaffold0008 (353-415)||(121194-121255)
[»] scaffold0194 (1 HSPs)
scaffold0194 (330-406)||(8413-8489)
[»] scaffold0005 (2 HSPs)
scaffold0005 (348-407)||(296957-297016)
scaffold0005 (355-409)||(296837-296891)
[»] scaffold0204 (1 HSPs)
scaffold0204 (295-408)||(26862-26982)


Alignment Details
Target: chr4 (Bit Score: 566; Significance: 0; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 281 - 1030
Target Start/End: Original strand, 24834624 - 24835352
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||    
T  24834624 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtgactat 24834723  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcatgtgaaaatggtctccaaagagattggcgattttgaggtgtttgtggcttcaagtcttt 473  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  24834724 tagagagagagtttaaaagagagtgttgctagcattcctcatatgaaaatggtctcaaaagagattggcgattttgagatgtttgtggcttcaagtcttt 24834823  T
Q  474 ggaatgccccaccgtattgagttaaacctccgtattgcaaaaagcttttctaaattgttaaaatagatggggatttttaacttttttctgccatgttatg 573  Q
    ||||||||||                  ||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||    
T  24834824 ggaatgcccc------------------tccgtattgcaaaaagcttttctaaattgt--------atggggatttttaacctttttctgccatgttatg 24834897  T
Q  574 acttatgatgcatatttttactgtaatctaaaataagttctcacttttatataacttaaatgtttattcttctttgcttgtctgtttttataaataattt 673  Q
    |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24834898 acttatg---catatttttactgtaatctaaaataagttctcacttttatataacttaaatgtttattcttctttgcttgtctgtttttataaataattt 24834994  T
Q  674 acaggcctatatgtatggatttttcaagaacaagaggattgtgctttatgacacattagttcaacaggttagaaaatactattatattgtttttgtcttt 773  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24834995 gcaggcctatatgtatggatttttcaagaacaagaggattgtgctttatgacacattagttcaacaggttagaaaatactattatattgtttttgtcttt 24835094  T
Q  774 ttgagctttagaactcctttagaaaacaaaagtatgcttcacttgggtaatcttaaaatatcaatttattaaaagatgttagaccttctcttgttttcta 873  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24835095 ttgagctttagaactcctttagaaaacaaaagtatgcttcacttgggtaatcttaaaatatcaatttattaaaagatgttagaccttctcttgttttcta 24835194  T
Q  874 tctctgtcaaaggcagcctttattctagtttttcatcatgtcaagagttaatcttgaaaggaaaagacattgc-atatttgactatgagattatgtttaa 972  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||    
T  24835195 tctctgtcaaaggcagcgttcattctagtttttcatcatgtcaagagttaatcttcaaaggaaaagacattgcaatatttgactatgaaattatgtttaa 24835294  T
Q  973 ctatttgatctattgatgtctgtgttacatttttcttaaaatctgatgtagattctta 1030  Q
     |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  24835295 ttatttgatctattgatgtttttgttacatttttcttaaaatctgatgtagattctta 24835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 8 - 285
Target Start/End: Original strand, 24834323 - 24834601
Alignment:
Q  8 ggcactttaggtggtggtttgcaagagggtgttgaaggagttggagatcttacatcggagtcttaattacctt-ctatagagacattcaagctgttacaa 106  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24834323 ggcactttaggtggtggtttgcaagagcgtgttgaaggagttggagatcttacatcggagtcttaattacctttctatagagacattcaagctgttacaa 24834422  T
Q  107 caagctcctttatggaaggattggttgatatcgaagtcattgagatgggtgacaacttggttctgttgaagtgtaataaaagcggtgagatggaaagcgc 206  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24834423 caagctcctttatggaaggattggttgatttcgaagtcattgagatgggtgacaacttggttctgttgaagtgtaataaaagcggtgagatggaaagcgc 24834522  T
Q  207 taaaatagaaaatagaagacgatgggaggcaaattttaaggatatctgaaaagagaaatgctagcaacactcccttttt 285  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  24834523 tagaatagaaaatagaagacgatgggaggcaaattttaagaatatctgaaaagagaaatgctagcaacactcacttttt 24834601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 39471204 - 39471338
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||| |||| |||||||||||||||||||| ||||||| ||||||       ||||||||||||||||| |||||||||||||||||||||||||||    
T  39471204 ttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtatt 39471303  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| ||||||||||||||||||| |||||||    
T  39471304 agagagaatgtttaaaagagagtgttgttagcatt 39471338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 26361441 - 26361307
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| | |||||||||| |||||||||||||||||||||||       |||||||||||| ||| ||||||||||||||| |||||||||||    
T  26361441 ttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatattcaaagtgtagacccataatgatttaaaccaataagtgagtgagtatt 26361342  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| ||||| ||||||||||||||||||||||    
T  26361341 agagagggtgttcaaaagagagtgttgctagcatt 26361307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 43771173 - 43771307
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| | ||||||||||||       ||||||||||||||||| |||||||||||||||||||||||||||    
T  43771173 ttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtatt 43771272  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    | |||| ||||| ||||||||| ||||||||||||    
T  43771273 aaagagggtgttcaaaagagagcgttgctagcatt 43771307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 282 - 414
Target Start/End: Original strand, 8109003 - 8109142
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||||| || |||||||||||||||||| | |||||||  |||||       ||||||||||||||||| |||||||||||||||| ||||||||||    
T  8109003 ttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtatt 8109102  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  8109103 agagagagtgttcaaaagagagtgttgctagcattactca 8109142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 281 - 401
Target Start/End: Original strand, 722203 - 722330
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||||| ||||||||||||| |||||||  ||||||       |||||||||||||||| ||||||||||||||||||||||||||    
T  722203 tttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtat 722302  T
Q  374 tagagagagtgtttaaaagagagtgttg 401  Q
    ||||||||||||| |||||| |||||||    
T  722303 tagagagagtgttcaaaagaaagtgttg 722330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 24938548 - 24938414
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||||||||| ||| |||||       |||||||||| ||||| |||||||||||||||||||| ||||||    
T  24938548 ttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagagagtaagtatt 24938449  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||| |||||| |||||| | |||||||||||||    
T  24938448 agagaaagtgttgaaaagataatgttgctagcatt 24938414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 281 - 402
Target Start/End: Complemental strand, 754714 - 754586
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| | |||| ||||||||||||| |||||||  ||||||       |||||||||||||||| ||||||||||||||||||||||||||    
T  754714 tttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtat 754615  T
Q  374 tagagagagtgtttaaaagagagtgttgc 402  Q
    ||||||||||||| |||||| ||||||||    
T  754614 tagagagagtgttcaaaagaaagtgttgc 754586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 50164443 - 50164576
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||  ||||||||||| ||||||||||||||| |||||||       |||||||||| |||||| |||||||||||||||| |||||| ||||    
T  50164443 tttattggataaaatcaatgtatctcccaccattttgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaagtgagcatta 50164542  T
Q  376 gagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||| |||||| |||||| ||||||||    
T  50164543 gagagagtgttcaaaagatagtgttactagcatt 50164576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 281 - 414
Target Start/End: Original strand, 49242216 - 49242356
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaaa-------gtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    |||| |||||||| ||||||| ||||||||| || |||||||||||||||        |||||||  |||||| |||||||||||||||||| |||||||    
T  49242216 ttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtagattcacaatgatttaaaccaataagagaatgagtat 49242315  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
     | ||||||||||||||||||||||||| ||||||| ||||    
T  49242316 catagagagtgtttaaaagagagtgttgttagcattactca 49242356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 326 - 406
Target Start/End: Original strand, 20454636 - 20454716
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagc 406  Q
    ||||||||||||| ||||||| ||||||| |||||| ||||||||| |||||||||||||| |||||||| ||||||||||    
T  20454636 ttcaaagtgtagatccacaatgatttaaatcaataacagagtgagtgttagagagagtgttcaaaagagaatgttgctagc 20454716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 326 - 406
Target Start/End: Original strand, 47009287 - 47009367
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagc 406  Q
    |||||||||||||  |||||| |||||||||||||||| |||||||||||||||| ||||| |||||||| ||||||||||    
T  47009287 ttcaaagtgtagatacacaatgatttaaaccaataagaaagtgagtattagagagggtgttcaaaagagaatgttgctagc 47009367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 330 - 404
Target Start/End: Complemental strand, 40991667 - 40991593
Alignment:
Q  330 aagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgcta 404  Q
    ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||| | ||||||||||    
T  40991667 aagtgtagacccacaatgatttaaaccaataaaagagtgagtatcagagagagtgttcaaaaaaaagtgttgcta 40991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 49077296 - 49077436
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||| |||  ||| ||| |||||||||||| |||||||||||||||       |||||||||||||||| |||||||||||||||||  |||||| |    
T  49077296 ttttattagataaaattaatatatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaaaccaataagagtttgagtact 49077395  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
      |||  ||||||||||||||||||| |||||||| |||||    
T  49077396 caagaaggtgtttaaaagagagtgttactagcattactcat 49077436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 282 - 414
Target Start/End: Original strand, 22542428 - 22542567
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||| ||| |||||| |||||| |||||| |||||||||||||||       ||  ||| |||||||| |||||||| ||||||||||||||||||    
T  22542428 ttttattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtgagtatt 22542527  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    | | |||||||| |||||| ||||||| ||||||| ||||    
T  22542528 aaaaagagtgttcaaaagatagtgttgttagcattgctca 22542567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 326 - 409
Target Start/End: Original strand, 11895135 - 11895219
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattag-agagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||| ||| | | |||||| ||||||||||||||||||||||    
T  11895135 ttcaaagtgtagacccacaatgatttgaacgaataagagagtgagtaatagaaaaaagtgttcaaaagagagtgttgctagcatt 11895219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 31251015 - 31250881
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt- 374  Q
    ||||||||||| |||||||||||||||||||||||| ||   ||||||       | |||||||||||||| ||||||| |||||| ||||| | ||||     
T  31251015 tttattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaagagtaaatattt 31250916  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||| ||||||| |||||||||||||||||    
T  31250915 agagagagtatttaaaatagagtgttgctagcatt 31250881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 326 - 398
Target Start/End: Complemental strand, 37451095 - 37451023
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtg 398  Q
    |||||||||||||| | |||| |||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  37451095 ttcaaagtgtagactcgcaatgatttaaaccaataaaagagtgagtattagagaaggtgtttaaaagagagtg 37451023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 285 - 415
Target Start/End: Complemental strand, 34129530 - 34129393
Alignment:
Q  285 tattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattaga 377  Q
    |||||||||  |||||||||| |||||||| |||||||| ||||||       ||||| ||| ||||||  ||||||||||||| |||||||||||||||    
T  34129530 tattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgtggactcacaatggtttaaaccaataaaagagtgagtattaga 34129431  T
Q  378 gagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||  ||||| | ||||||||||||| |||||| |||||    
T  34129430 gattgtgttcagaagagagtgttgccagcattactcat 34129393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 283 - 415
Target Start/End: Complemental strand, 43124646 - 43124507
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtggg-------ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    |||| |||||| |||||||||||||||||||||||||||| ||       |||||| |||| |||||  |  ||||||||||||||||||||| ||||||    
T  43124646 tttaatggatgaaatcaatgtatgtcccaccattttgtgtaggctttattttcaaactgtatacccatgaagatttaaaccaataagagagtgcgtatta 43124547  T
Q  376 gagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
     | |||||||| ||| || ||||||| ||||||| |||||    
T  43124546 taaagagtgttcaaaggaaagtgttgttagcattactcat 43124507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 283 - 386
Target Start/End: Complemental strand, 33653621 - 33653511
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    |||||| |||| ||||||||||||||||||||||||||| || |||||       | | | || ||||||| |||||||||||||||| |||||||||||    
T  33653621 tttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaattttcaaaatattgatccacaatgatttaaaccaataagaaagtgagtatta 33653522  T
Q  376 gagagagtgtt 386  Q
    |||||||||||    
T  33653521 gagagagtgtt 33653511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 281 - 404
Target Start/End: Original strand, 52671876 - 52672006
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| ||| |||||||||||||||||||| |||  ||||||       |||||| |  | |||| |||||||| ||||||| |||||||||    
T  52671876 tttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaataagatagtgagtat 52671975  T
Q  374 tagagagagtgtttaaaagagagtgttgcta 404  Q
    || ||||||||||||||||| | ||||||||    
T  52671976 taaagagagtgtttaaaagataatgttgcta 52672006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 397
Target Start/End: Complemental strand, 25719244 - 25719123
Alignment:
Q  284 ttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtag-acccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||| || |||||||||||||||||||| ||| ||||||||       |||| ||||| ||||||||| |||||| ||||| |||||||||||||||    
T  25719244 ttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaacccaatcagagagtgagtatta 25719145  T
Q  376 gagagagtgtttaaaagagagt 397  Q
    |||| | |||| ||||||||||    
T  25719144 gagaaattgttcaaaagagagt 25719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 415
Target Start/End: Complemental strand, 45311078 - 45310941
Alignment:
Q  285 tattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattaga 377  Q
    ||||||||| ||||||| |||||||||||| |||||| || |||||       |||| ||||  ||||| ||||||| |||||||||||| |||||||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagtaagtattaga 45310979  T
Q  378 gagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||   ||| |||||||| ||||||||||||| |||||    
T  45310978 gagtcagttcaaaagagaatgttgctagcattactcat 45310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 52279341 - 52279258
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||| |||||||||||| ||||| | ||||| |||||||| ||||||| ||||||||||||| ||| |||||||| ||||    
T  52279341 ttcaaagtttagacccacaatgatttagatcaataggagagtgaatattagatagagtgtttaaaaaagaatgttgctaccatt 52279258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 19447241 - 19447311
Alignment:
Q  337 gacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||| ||||| ||||||  |||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  19447241 gaccgacaatgatttaactcaattagagagtgagtattaaagagagtgttcaaaagagagtgttgctagca 19447311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 366
Target Start/End: Complemental strand, 20225474 - 20225383
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagag 366  Q
    ||||||||||||||||| ||| ||||||||||| ||| |||||||||       ||||||||||| |||||| |||||||||||||||||||    
T  20225474 ttttattggatggaatccatgcatgtcccaccactttttgtgggttctatttccaaagtgtagactcacaatgatttaaaccaataagagag 20225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 400
Target Start/End: Complemental strand, 19937306 - 19937180
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    |||| |||||||  |||||||||||||||||||||| | |||| ||||       ||||| |||| | ||||| ||| ||||||| || |||||||| ||    
T  19937306 ttttaattggatacaatcaatgtatgtcccaccattatatgtgagttctattttcaaagtatagatcgacaatgattcaaaccaacaaaagagtgagaat 19937207  T
Q  374 tagagagagtgtttaaaagagagtgtt 400  Q
    || ||||||||||||||||||||||||    
T  19937206 taaagagagtgtttaaaagagagtgtt 19937180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 51904696 - 51904616
Alignment:
Q  328 caaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||| |||||||| || |||||| |||||||||  || ||| |||||||||||||| ||||||||||||||||||||    
T  51904696 caaagtgtgagacccaccatgatttaagccaataagaatgtaagtgttagagagagtgttgaaaagagagtgttgctagca 51904616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 45081822 - 45081743
Alignment:
Q  328 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||||| ||| | || ||||  |||||||| |||||    
T  45081822 caaagtgtacactcacaataatttaaaccaataaaagagtgagtattagaaagaattttcaaaaaggagtgttgatagca 45081743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 385
Target Start/End: Original strand, 29699536 - 29699645
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc------aaagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    |||||||||||| |||||||  ||||||||||| ||||||| |||||      ||||| ||| || ||||| ||||||| |||||||||||||| |||||    
T  29699536 ttttattggatgaaatcaatacatgtcccaccactttgtgttggttctatttcaaagtatagcccgacaatgatttaaaacaataagagagtgaatatta 29699635  T
Q  376 gagagagtgt 385  Q
    || |||||||    
T  29699636 gatagagtgt 29699645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 38537593 - 38537512
Alignment:
Q  328 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||  || ||| ||||||| |||||| ||| ||| |||||||||||||||| |||||| |||||||||| ||||    
T  38537593 caaagtgtagattcataatgatttaaatcaataaaagaatgattattagagagagtgttcaaaagaaagtgttgctaacatt 38537512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 39016710 - 39016845
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtag-acccacaataatttaaaccaataagagagtgagtat 373  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||       |||||||||| | | ||| | |||| | | ||||| ||||| |||      
T  39016710 ttttattggatgaaatcaatgtatgtcccaccattttacgtgggttccatttccaaagtgtagtatctacattgattttacctaataaaagagtaagtgc 39016809  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||| ||||||||||||||||| ||||    
T  39016810 tagagagagtgttcaaaagagagtgttgctaacatt 39016845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 380
Target Start/End: Complemental strand, 5044674 - 5044568
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| ||||||| |||||| ||| |||||||||| ||||       ||| |||||||||||||  |||||||||||||| ||| ||| |||    
T  5044674 tttttattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaaccaataaaagaatgaatat 5044575  T
Q  374 tagagag 380  Q
    |||||||    
T  5044574 tagagag 5044568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 415
Target Start/End: Complemental strand, 8109011 - 8108951
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||||  ||||||||||||| ||||| |||||||||||||||| |||||    
T  8109011 ccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatttctcat 8108951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 281 - 415
Target Start/End: Complemental strand, 30867066 - 30866924
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtaga-cccacaataatttaaaccaataagagagtgagta 372  Q
    ||||||||||||  ||| |||||||||||||||| ||| |||||||||       |||||||||| |||||| |  ||| | | ||||| | | |||||     
T  30867066 tttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcccacattgttttcacctaataaaaaaatgagtg 30866967  T
Q  373 ttagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
     ||||||||||||||||||||||| |||||||||||| |||||    
T  30866966 ctagagagagtgtttaaaagagagcgttgctagcatttctcat 30866924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 326 - 405
Target Start/End: Complemental strand, 46536344 - 46536267
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctag 405  Q
    ||||||||||| ||||||| || |||||| |||||||||||||| ||||  | | ||||||||||||||||| |||||||    
T  46536344 ttcaaagtgtaaacccacactattttaaagcaataagagagtgaatatt--aaatagtgtttaaaagagagtcttgctag 46536267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 369
Target Start/End: Complemental strand, 50481678 - 50481584
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtga 369  Q
    |||||||||||| |||||| ||||||| ||||| ||||| ||| |||       ||||||||||| |||||| ||||||||||||||||||||||    
T  50481678 ttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatttaaaccaataagagagtga 50481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 27654598 - 27654657
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||||||||| | | ||||| || ||||||||||| ||||||||||||||||||||    
T  27654598 atttaaaccaataataaattgagtgtttgagagagtgttgaaaagagagtgttgctagca 27654657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 37315610 - 37315559
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||||||| |||||||||||| | |||||||||||||||||||||| ||||    
T  37315610 agagtgagtgttagagagagtgctcaaaagagagtgttgctagcatttctca 37315559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 10169718 - 10169648
Alignment:
Q  335 tagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctag 405  Q
    |||| ||||||| |||||||||||||||||||||| ||||| | ||  |||| |||| |||||||||||||    
T  10169718 tagatccacaattatttaaaccaataagagagtgaatattaaaaaggatgttaaaaaaagagtgttgctag 10169648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 356 - 414
Target Start/End: Original strand, 13070069 - 13070127
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    |||||| ||||||||| ||||||| | |||| |||||||||||||||||||| ||||||    
T  13070069 caataaaagagtgagtgttagagaaaatgttcaaaagagagtgttgctagcactcctca 13070127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 27654532 - 27654478
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||  ||||||||    
T  27654532 ccaataagagaatgagtgttagagagagtgttgaaaagagagtgtccctagcatt 27654478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 40812092 - 40812034
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||||||  ||||||||||||| |||| |||||||||||||||| ||||    
T  40812092 ccaataaaagagtgagtgctagagagagtgttcaaaaaagagtgttgctagcatacctc 40812034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 413
Target Start/End: Original strand, 40991722 - 40991772
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||  ||||||||||||| ||||| ||||||||||||||||||||    
T  40991722 agagtgagtgatagagagagtgttgaaaagtgagtgttgctagcattcctc 40991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 295 - 408
Target Start/End: Complemental strand, 48339460 - 48339340
Alignment:
Q  295 aatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttt 387  Q
    ||||||||||||| |||||| |||||||||||||||       || ||||||||| |||  ||||||||||||| ||||||  | ||||||| |||| |     
T  48339460 aatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaagagtggatgttagagaaagtgctc 48339361  T
Q  388 aaaagagagtgttgctagcat 408  Q
    ||||  |||||||||||||||    
T  48339360 aaaaacgagtgttgctagcat 48339340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 19933555 - 19933474
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    |||||||||||  ||||| |||||||| |||||  ||||  |||||| |||||||||| |||| |||||||||||| |||||    
T  19933555 aaagtgtagactaacaatgatttaaactaataaatgagttggtattaaagagagtgttcaaaatagagtgttgctaacattc 19933474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 43958198 - 43958327
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggt------tcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    |||||||| || ||||||||||||||||||||||||| ||||| |      ||||  || |||  || | | |||||||||||||||||||| ||||  |    
T  43958198 ttttattgaatagaatcaatgtatgtcccaccattttatgtggatctattttcaatatgcagaatcaaagtgatttaaaccaataagagagtaagta--a 43958295  T
Q  376 gagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||| |||||||||| ||| |||||    
T  43958296 gagagagtgttcaaaagagagtattgttagca 43958327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 47237866 - 47237923
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcct 412  Q
    ||||||| ||||||| |  ||||||||||||| |||||||||||||| ||||||||||    
T  47237866 ccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttgatagcattcct 47237923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 51206171 - 51206228
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcct 412  Q
    ||||||| |||||||||  ||||||||||| | |||||||||||||||||| ||||||    
T  51206171 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagtattcct 51206228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 5545687 - 5545755
Alignment:
Q  336 agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgcta 404  Q
    ||||||||| | |||||| | ||| | | ||| |||||||||||||||||| |||||||||||||||||    
T  5545687 agacccacattgatttaagcaaattaaaaagtaagtattagagagagtgttcaaaagagagtgttgcta 5545755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 24106772 - 24106816
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    |||||||||||||| || |||||||||||||| ||||||||||||    
T  24106772 ccaataagagagtgggtgttagagagagtgttgaaaagagagtgt 24106816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 326 - 413
Target Start/End: Complemental strand, 37586548 - 37586460
Alignment:
Q  326 ttcaaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||| |||||||| || |||||| | ||| ||| ||||||| || ||||||||||| ||||||| ||||  ||||||||||||    
T  37586548 ttcaaagtgtgagacccaccatgatttaagctaattagaaagtgagtgttggagagagtgttgaaaagagggtgtccctagcattcctc 37586460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 46242077 - 46242029
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa 330  Q
    |||||| ||||| ||||| |||||||||||||||||||||| |||||||    
T  46242077 ttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaa 46242029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 415
Target Start/End: Complemental strand, 51475217 - 51475157
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||||||| |||||| |||||||||||| |  |||||||||||| |||||||| |||||    
T  51475217 ccaataagagggtgagtgttagagagagtgctagaaagagagtgttcctagcatttctcat 51475157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 53870998 - 53871046
Alignment:
Q  365 agtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| ||||||||||||||  |||| ||||||||||||||||||||    
T  53870998 agtgagtgttagagagagtgttggaaagtgagtgttgctagcattcctc 53871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 19321947 - 19321879
Alignment:
Q  337 gacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||| |||| ||| |||||||||||||||| |||||||||||||  ||| |||||||||||  |||||||    
T  19321947 gacccgcaatgattcaaaccaataagagagtaagtattagagaga--gttcaaaagagagtgaagctagca 19321879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 42862555 - 42862508
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    |||||||||| || |||||||||||||||||||| ||| |||||||||    
T  42862555 tttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttc 42862508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 410
Target Start/End: Complemental strand, 43771181 - 43771126
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    ||||||| |||||||||  ||||||||||||| ||||| ||||||||||| |||||    
T  43771181 ccaataaaagagtgagtcatagagagagtgttcaaaagtgagtgttgctaccattc 43771126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 25719231 - 25719286
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctag 405  Q
    |||| ||||||||||||||||||| || |||||||||  ||||| |||||||||||||    
T  25719231 atttcaaccaataagagagtgagtgtttgagagagtg--taaaaaagagtgttgctag 25719286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 39016718 - 39016664
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| | ||| ||| ||| ||||||||||||||||||| |||||||||||||    
T  39016718 ccaataaaatagtaagtgttatagagagtgtttaaaagagaatgttgctagcatt 39016664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 377 - 415
Target Start/End: Complemental strand, 39471190 - 39471152
Alignment:
Q  377 agagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  39471190 agagagtatttaaaagtgagtgttgctagcattcctcat 39471152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 42862473 - 42862415
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||||||  |||| | |||| | ||||||||||||||||||||||||||    
T  42862473 ccaataaaagagtgagtgctagatatagtgctcaaaagagagtgttgctagcattcctc 42862415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 346 - 416
Target Start/End: Complemental strand, 48608144 - 48608074
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    |||||| | ||||||| ||||||| | ||| ||| |||  |||||||||||||||| ||||||||||||||    
T  48608144 taattttatccaataaaagagtgaatgttaaagaaagtacttaaaagagagtgttgttagcattcctcatg 48608074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 13069997 - 13069936
Alignment:
Q  354 accaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||||| |||||||||  ||||||| ||| | |||||||||| || ||||||||||||||    
T  13069997 accaataaaagagtgagtgctagagagtgtgctcaaaagagagtattcctagcattcctcat 13069936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 356 - 413
Target Start/End: Original strand, 22158406 - 22158463
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||| |||||||| | ||||| |||| ||||| |||||||| |||||||||||    
T  22158406 caataagagggtgagtataatagagaatgttgaaaagtgagtgttgttagcattcctc 22158463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 30033341 - 30033394
Alignment:
Q  357 aataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    ||||| ||||||||||||||||| ||||||||||||| |   ||||||||||||    
T  30033341 aataaaagagtgagtattagagatagtgtttaaaagaaaaatttgctagcattc 30033394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 414
Target Start/End: Complemental strand, 31699538 - 31699473
Alignment:
Q  349 tttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||| |||||| |||||||||| |||||||||||| |  ||||||||||||  ||||||| ||||    
T  31699538 tttaatccaataggagagtgagtgttagagagagtgctagaaagagagtgttcttagcatttctca 31699473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 31699588 - 31699649
Alignment:
Q  338 acccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    |||||||  ||||| | ||||||||||||||||| || |||||||||||  |||||||||||    
T  31699588 acccacatgaatttcacccaataagagagtgagtgttggagagagtgttagaaagagagtgt 31699649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 364 - 413
Target Start/End: Original strand, 33653623 - 33653672
Alignment:
Q  364 gagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| || ||||||||||||| ||||  ||||||||||||||||||||    
T  33653623 gagtgattaatagagagagtgttgaaaactgagtgttgctagcattcctc 33653672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 341 - 409
Target Start/End: Original strand, 34961762 - 34961828
Alignment:
Q  341 cacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||| ||||| ||||||||||||  | |||||||| ||| |||||||||  |||||||    
T  34961762 cacaataatttaaactaataaaagagtgagtatt--aaagagtgttcaaacgagagtgttattagcatt 34961828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 376 - 413
Target Start/End: Original strand, 44832612 - 44832649
Alignment:
Q  376 gagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  44832612 gagagagtgctcaaaagagagtgttgctagcattcctc 44832649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 165; Significance: 1e-87; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 782 - 1008
Target Start/End: Complemental strand, 12318949 - 12318721
Alignment:
Q  782 tagaactcctttagaaaacaaaagtatgcttcacttgggtaatcttaaaatatcaatttattaaaagatgttagaccttctcttgttttctatctctgtc 881  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12318949 tagaactcctttagaaaacaaatgtatgcttcacttgggtaatcttaaaatatcaatttattaaaagatgttagaccctctcttgttttctatctctgtc 12318850  T
Q  882 aaaggcagcctttattctagtttttcatcatgtc-aagagttaatcttgaaaggaaaagacattgc-atatttgactatgagattatgtttaactatttg 979  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| || |||||||||  |||||| |||||||||||| |||||||||||||  ||||     
T  12318849 aaaggcagccttcattctagtttttcatcatgtcaaagagttaatattcaaaggaaaattcattgcaatatttgactataagattatgtttaataatttt 12318750  T
Q  980 atctattgatgtctgtgttacatttttct 1008  Q
    |||||||||||| ||||||||||||||||    
T  12318749 atctattgatgtttgtgttacatttttct 12318721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 281 - 403
Target Start/End: Complemental strand, 28490856 - 28490727
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||||| ||||||||||||| |||||||  ||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  28490856 tttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaattttgaaagtgtagacccacaataatttaaaccaataagagagtgagtat 28490757  T
Q  374 tagagagagtgtttaaaagagagtgttgct 403  Q
    ||||||||||||| ||||||||||||||||    
T  28490756 tagagagagtgttcaaaagagagtgttgct 28490727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 259 - 409
Target Start/End: Complemental strand, 5413892 - 5413733
Alignment:
Q  259 gagaaatgctagcaacactccctttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtagacccacaataattt 351  Q
    |||||||||||||||| | | ||||| |||||||| |||||||||||||||||||| ||||||||||||       ||||||||||||||| ||| ||||    
T  5413892 gagaaatgctagcaactcactctttt-attggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgattt 5413794  T
Q  352 aaaccaataagagagtgagtatta---gagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||| | |||||||||||    |||||||||| |||||||||||||||| |||||    
T  5413793 aaaccaataaaaaagtgagtattatagtagagagtgttcaaaagagagtgttgcttgcatt 5413733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 298 - 413
Target Start/End: Original strand, 34368423 - 34368545
Alignment:
Q  298 caatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaa 390  Q
    |||||||||| |||||| ||||||||||||||       ||||||||||||||||| ||||||||||||||||||||| ||   |||||||||| | |||    
T  34368423 caatgtatgttccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtgacagagagagtgctcaaa 34368522  T
Q  391 agagagtgttgctagcattcctc 413  Q
    |||||||||||||||||||||||    
T  34368523 agagagtgttgctagcattcctc 34368545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 41105703 - 41105569
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||| | ||||||||| | |||||||||||||||       |||| | ||||||| | ||||||||||||||||||| |||||||    
T  41105703 ttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgatttaaaccaataagagagcgagtatt 41105604  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||| | |||||||||||||||| |||||    
T  41105603 agagagagtgctcaaaagagagtgttgctcgcatt 41105569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 282 - 399
Target Start/End: Complemental strand, 30326007 - 30325883
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||| ||||| ||| || | ||||       |||||||||| || |||| |||||||||||||||| ||||||||||    
T  30326007 ttttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgtagatccgcaatgatttaaaccaataagaaagtgagtatt 30325908  T
Q  375 agagagagtgtttaaaagagagtgt 399  Q
    |||||||||||| ||||||||||||    
T  30325907 agagagagtgttcaaaagagagtgt 30325883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 295 - 409
Target Start/End: Original strand, 37455409 - 37455533
Alignment:
Q  295 aatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattaga----gagagt 383  Q
    ||||||||||||| ||||||||||||| ||||||||       ||||||||| |||||||||| ||||||||||||||||||||||||||    ||| ||    
T  37455409 aatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtagactcacaataatt-aaaccaataagagagtgagtattagagagggagggt 37455507  T
Q  384 gtttaaaagagagtgttgctagcatt 409  Q
    ||| ||||||||||||||||||||||    
T  37455508 gttcaaaagagagtgttgctagcatt 37455533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 10142109 - 10141998
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||  |||||||||||||||||||| ||||||| |||||       |||||||||||| ||||| ||||||| |||||||||||||||| ||    
T  10142109 ttttattggataaaatcaatgtatgtcccaccactttgtgttggttccattttcaaagtgtagaccaacaattatttaaatcaataagagagtgagtgtt 10142010  T
Q  375 agagagagtgtt 386  Q
    ||||||||||||    
T  10142009 agagagagtgtt 10141998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 329 - 409
Target Start/End: Complemental strand, 17434928 - 17434849
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||||| | |||||||||||||| |||||||  |||||||||| |||||||||||||||||||||| ||||    
T  17434928 aaagtgtagacccacattgatttaaaccaataaaagagtgaacattagagaga-tgtttaaaagagagtgttgctaacatt 17434849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 25710554 - 25710494
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  25710554 ttcaaagtgtagacccacaataatttaaaccaataagagaatgaatattaaagagagtgtt 25710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 284 - 370
Target Start/End: Original strand, 39246657 - 39246750
Alignment:
Q  284 ttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgag 370  Q
    |||||||||  |||||||||||||||||||| |||||||| |||||       |||||||||||||||||| ||||||||||||||||||||||    
T  39246657 ttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagttttcaaagtgtagacccacaatactttaaaccaataagagagtgag 39246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 28434900 - 28434821
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||| |||||||||||| |||||||||||||||| | |||||||||||||    |||||||||||| |||||||||||||    
T  28434900 ttcaaagtttagacccacaatgatttaaaccaataagaaaatgagtattagaga----gtttaaaagagaatgttgctagcatt 28434821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 282 - 398
Target Start/End: Complemental strand, 34384824 - 34384701
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||||| || |||||||||||||||||| |||||||||| ||||||       | | ||||| |||||| ||||| ||| |||| ||||||||||||    
T  34384824 ttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactcacaatgatttagaccgataaaagagtgagtatt 34384725  T
Q  375 agagagagtgtttaaaagagagtg 398  Q
    | |||||||||| |||||||||||    
T  34384724 aaagagagtgttcaaaagagagtg 34384701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 14553613 - 14553665
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagaga 381  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  14553613 aaagtgtagacccacaataaattaaaccaacaagagagtgagtattagagaga 14553665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 326 - 410
Target Start/End: Complemental strand, 28223858 - 28223774
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    |||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||  |||| ||||||| |||||| ||| ||||    
T  28223858 ttcaaagtatagacccataatgatttaaaccaataaaagagtgagtattagagaggatgttcaaaagagggtgttgttagtattc 28223774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 329 - 409
Target Start/End: Complemental strand, 28611857 - 28611777
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||| |||||| ||||||| |||||| |||||  || |||||||||||| | ||||||||||||||||||||||    
T  28611857 aaagtgtagacgcacaatgatttaaatcaataaaagagttggtgttagagagagtgctcaaaagagagtgttgctagcatt 28611777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 4959333 - 4959275
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||| ||||||||||||||| | ||||||||||||||||||||||||||    
T  4959333 ccaataaaagagtgggtattagagagagtgctcaaaagagagtgttgctagcattcctc 4959275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 12076133 - 12076063
Alignment:
Q  337 gacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||| | |||||| ||||| ||||||||||||||||| | |||||| ||||||||||||||||||||    
T  12076133 gacccacattgatttaagccaattagagagtgagtattagataaagtgttcaaaagagagtgttgctagca 12076063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 413
Target Start/End: Complemental strand, 25002086 - 25002000
Alignment:
Q  328 caaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||| |||||||| || |||||||||||| ||| ||||||| || ||||||||||| ||||||||||||  ||| ||||||||    
T  25002086 caaagtgtgagacccactatgatttaaaccaattagaaagtgagtgttggagagagtgttgaaaagagagtgtccctatcattcctc 25002000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 407
Target Start/End: Complemental strand, 27592585 - 27592453
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||| ||||| ||| || | ||||       |||||||||| |  |||| ||||||||||||||||||||| |||      
T  27592585 ttttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaaccaataagagagtgggtaca 27592486  T
Q  375 agagagagtgtttaaaagagagtgttgctagca 407  Q
     |||||||| || |||||||||||||| |||||    
T  27592485 ggagagagtattcaaaagagagtgttgatagca 27592453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 43405493 - 43405551
Alignment:
Q  328 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||| |||| |||||||    
T  43405493 caaagtgtagacccacaatgatttaaatcaataagagagtgaatatcagagggagtgtt 43405551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 5465725 - 5465656
Alignment:
Q  335 tagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgcta 404  Q
    |||||||| ||| |||||||||||||||||||||| ||||||| | |||||| ||  |||||||||||||    
T  5465725 tagacccataatgatttaaaccaataagagagtgaatattagaaaaagtgttcaatggagagtgttgcta 5465656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 17537235 - 17537124
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||| |||  |||||||||||||||||||| ||| ||| ||||       ||||||||||| ||| ||| |||||||||||||||||||||| |||     
T  17537235 ttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatccataatgatttaaaccaataagagagtgaatata 17537136  T
Q  375 agagagagtgtt 386  Q
    ||||||| ||||    
T  17537135 agagagattgtt 17537124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 41330526 - 41330394
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||| |||| ||| ||||||||||||| || ||||||| |||||||       ||||||||| |||||| |||||||||||||||| |   ||||||    
T  41330526 ttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataagaaatgtagtatt 41330427  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    | |||| ||||| |||  |||||||||||||||||    
T  41330426 aaagagtgtgttcaaa--agagtgttgctagcatt 41330394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 357 - 414
Target Start/End: Original strand, 42224718 - 42224775
Alignment:
Q  357 aataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||| |||||||||  ||||||||||| | |||||||||||||||||||||||||||    
T  42224718 aataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctca 42224775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 290 - 401
Target Start/End: Original strand, 25919266 - 25919384
Alignment:
Q  290 gatggaatcaatgtatgtcccaccattttgtgtggg-------ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagag 382  Q
    |||| ||||||| |||||| ||||||||||||||||       |||||||||||||| |||||| |||||||||||||| | | ||| ||||| ||| ||    
T  25919266 gatgaaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataaaaaaatgaatattaaagaaag 25919365  T
Q  383 tgtttaaaagagagtgttg 401  Q
    | || |||||||| |||||    
T  25919366 tattcaaaagagaatgttg 25919384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 26072231 - 26072291
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||||  |||||||| || | ||||||||||||||||||||||||||||    
T  26072231 ccaataaaagagtgagtgctagagagaatgctcaaaagagagtgttgctagcattcctcat 26072291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 1649614 - 1649547
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| | ||||||||| ||||||| |||||||||||||| ||||||||||||  ||| ||||||||    
T  1649614 taatttcatccaataagatagtgagtgttagagagagtgttgaaaagagagtgtccctaacattcctc 1649547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 2935445 - 2935496
Alignment:
Q  344 aataatttaaaccaataagagagtgagtattagagagagtgtttaaaagaga 395  Q
    |||||||||||||||||| ||||||||||||||||| | |||| ||||||||    
T  2935445 aataatttaaaccaataaaagagtgagtattagagaaattgttcaaaagaga 2935496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 407
Target Start/End: Original strand, 4714795 - 4714928
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||  ||| | ||| ||||||| ||||||||||||||||       ||| ||||||  |||||| ||||| |||||||| ||||    |||    
T  4714795 tttttattggattaaattattgtgtgtcccatcattttgtgtgggttctattttcaaaatgtagatacacaatgatttataccaataaaagagaacatat 4714894  T
Q  374 tagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||| |||| ||||||||||||||||||||    
T  4714895 tagagagaatgttcaaaagagagtgttgctagca 4714928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 404
Target Start/End: Complemental strand, 10666763 - 10666692
Alignment:
Q  333 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgcta 404  Q
    ||||||| |||| |||||||||||||||||||||||| | ||| ||||||| || |||| ||||||| ||||    
T  10666763 tgtagactcacattaatttaaaccaataagagagtgaatgttaaagagagtcttaaaaaaagagtgtagcta 10666692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 32309544 - 32309477
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| | |||||||||||||||||  |||||||| |||| ||||||||||||  ||||||||||||    
T  32309544 taattttatccaataagagagtgagtgctagagagaatgttgaaaagagagtgtctctagcattcctc 32309477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 40971579 - 40971638
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||| |||||||||  ||||||||||| | |||||||||||||| |||||||||||||    
T  40971579 caataaaagagtgagtgctagagagagtgctcaaaagagagtgttgttagcattcctcat 40971638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 414
Target Start/End: Complemental strand, 41034510 - 41034423
Alignment:
Q  328 caaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    |||||||| |||||||| || |||||| ||||| ||| ||||||| || || |||||||| |||||||||||||  ||||||||||||    
T  41034510 caaagtgtgagacccaccatgatttaagccaattagaaagtgagtgttggatagagtgttgaaaagagagtgtttgtagcattcctca 41034423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 25564099 - 25564033
Alignment:
Q  263 aatgctagcaacactc-cctttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    |||| ||||||||||| || |||||||||||| ||| ||||||||| |||||| |||||||||||||    
T  25564099 aatgttagcaacactcacccttttattggatgaaataaatgtatgttccaccactttgtgtgggttc 25564033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 328 - 409
Target Start/End: Complemental strand, 36337970 - 36337886
Alignment:
Q  328 caaagtgtagacccacaataatttaaaccaataagaga---gtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||||||| |||||||||||||| | |     | ||||||||||||||||| |||||| ||||||| |||||||    
T  36337970 caaagtgtagacccacaatgatttaaaccaataaaaaaaataagtgtattagagagagtgttcaaaagatagtgttgatagcatt 36337886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 40971505 - 40971447
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| | ||||||| ||||| |||||||| |||||||||||||||||||| |||||    
T  40971505 ccaataaaatagtgagtgttagatagagtgttcaaaagagagtgttgctagcactcctc 40971447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 26227007 - 26227068
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||| ||||||||||||| | ||| |||||||| |||||||||| |||||||| ||||    
T  26227007 atttaaactaataagagagtgattgttaaagagagtgcttaaaagagaatgttgctaacatt 26227068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 413
Target Start/End: Complemental strand, 42224724 - 42224585
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagaccc-acaataatttaaaccaataagagagtgagtat 373  Q
    ||||||| | || |||||||||||||||||||| ||| |||||||||       |||||||||  || ||| | |||| | ||||||| |||||||||      
T  42224724 ttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgc 42224625  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    | ||||||||  | ||||||||||||||||||||||||||    
T  42224624 tggagagagttctcaaaagagagtgttgctagcattcctc 42224585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 339 - 407
Target Start/End: Complemental strand, 2201657 - 2201589
Alignment:
Q  339 cccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||| |||| | |||||||||||||| ||  || |||||||||| ||||||||||||| ||||||    
T  2201657 cccacaatgattttacccaataagagagtgggtgctaaagagagtgttgaaaagagagtgttcctagca 2201589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 6264017 - 6264069
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||||||  |||| |||||| |||||||||||||||||||||| |||||||    
T  6264017 agagtgagtgctagatagagtgcttaaaagagagtgttgctagcactcctcat 6264069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 32401253 - 32401297
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||    
T  32401253 agagtgagtattagagagagtgttcaaaagaaggtgttgctagca 32401297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 414
Target Start/End: Original strand, 4959406 - 4959465
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||||| |||||||||  ||||||||||| | ||||||||||||| |||||| ||||||    
T  4959406 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttactagcactcctca 4959465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 17568763 - 17568696
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| | ||||||| |||||| ||  ||| ||||||| | ||||||||||||||||||||||||||    
T  17568763 taatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctc 17568696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 13456298 - 13456252
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    |||||| ||||| ||||||||||| |||||||||||| |||||||||    
T  13456298 ttttatcggatgaaatcaatgtatttcccaccattttatgtgggttc 13456252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 30892235 - 30892289
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| |||||||||| |||||||||||| |  |||||||||||| ||||||||    
T  30892235 ccaataggagagtgagtgttagagagagtgctagaaagagagtgttcctagcatt 30892289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 348 - 409
Target Start/End: Complemental strand, 5990579 - 5990518
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| |||||| |||||||||| |||||||||||| | ||||||||| |||  |||||||    
T  5990579 atttaatccaatatgagagtgagtgttagagagagtgctaaaaagagagcgttcttagcatt 5990518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 2e-73; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 566 - 750
Target Start/End: Complemental strand, 29810767 - 29810584
Alignment:
Q  566 atgttatgacttatgatgcatatttttactgtaatctaaaataagttctcacttttatataacttaaatgtttattcttctttgcttgtctgtttttata 665  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||||| |||||||||||| |||    
T  29810767 atgttatgacttatgatgcatatttttactgtaatctaaaatatgttctcacttttatctaactttagtgtttattcttctttacttgtctgtttt-ata 29810669  T
Q  666 aataatttacaggcctatatgtatggatttttcaagaacaagaggattgtgctttatgacacattagttcaacaggttagaaaat 750  Q
    |||| ||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29810668 aatactttgcaggcctatatgtatggattcttcaagaacaaaaggattgtgctttatgacacattagttcaacaggttagaaaat 29810584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 896 - 1030
Target Start/End: Complemental strand, 29809445 - 29809310
Alignment:
Q  896 ttctagtttttcatcatgtcaagagttaatcttgaaaggaaaagacattgca-tatttgactatgagattatgtttaactatttgatctattgatgtctg 994  Q
    |||||||||||  |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| |||| || |||||||||||||||||| ||    
T  29809445 ttctagttttttgtcatgtcaagagttaatctttaaatgaaaagacattgcaatatttgactatgagattgtgttgaattatttgatctattgatgtttg 29809346  T
Q  995 tgttacatttttcttaaaatctgatgtagattctta 1030  Q
    ||| || |||||| ||||||||||||||||||||||    
T  29809345 tgtgacctttttcataaaatctgatgtagattctta 29809310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 27888333 - 27888467
Alignment:
Q  286 attggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattagag 378  Q
    |||||||  |||||||||||||||||||| |||||||||||||||       |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27888333 attggataaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtgttagag 27888432  T
Q  379 agagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| | ||||||||||||||||||||||||||    
T  27888433 agagtgctcaaaagagagtgttgctagcattcctc 27888467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 285 - 409
Target Start/End: Original strand, 27949323 - 27949454
Alignment:
Q  285 tattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtattaga 377  Q
    ||||||||| ||||||  ||||||| ||||||||||||| |||||       ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  27949323 tattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgtagacccacaatgatttaaactaataagagagtgagtattaga 27949422  T
Q  378 gagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||| ||||||||||||||||||||||    
T  27949423 gagagtgttcaaaagagagtgttgctagcatt 27949454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 22189986 - 22190126
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||       |||||||||||| |||| ||||||||||||||  |||||||||||    
T  22189986 ttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaattttcaaagtgtagacccgcaatgatttaaaccaataaacgagtgagtatt 22190085  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||| ||||| |||||||||||||| ||||||| |||||    
T  22190086 agagagggtgttcaaaagagagtgttgttagcattactcat 22190126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 337 - 408
Target Start/End: Complemental strand, 6580073 - 6580002
Alignment:
Q  337 gacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcat 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  6580073 gacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttggtagcat 6580002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 11824118 - 11824256
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||||||||||| | ||||       ||||||| ||||||||| ||||||| |||||||| ||||||||||    
T  11824118 ttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaacccacaatgatttaaatcaataagaaagtgagtatt 11824217  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
      |||||||||| |||||||||||||| ||||||| |||||    
T  11824218 --agagagtgttcaaaagagagtgttgttagcattactcat 11824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 46517339 - 46517472
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||  ||||||||||| |||||||||| |||| |||||||       |||||||||| |||||| |||||||||||||||||| |||||||||    
T  46517339 tttattggataaaatcaatgtatatcccaccattctgtgggggttcaattttcaaagtgtagactcacaatgatttaaaccaataagagaatgagtatta 46517438  T
Q  376 gagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||  |||| ||||||||||||||||||||||    
T  46517439 gagaggctgttcaaaagagagtgttgctagcatt 46517472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 48374519 - 48374440
Alignment:
Q  328 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48374519 caaagtgtatactcacaataatttaaaccaacaagagagtgagtattagagagagtgttcaaaagagagtgttgctagca 48374440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 12263569 - 12263458
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtggg-------ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||| ||||||||||||||||||||||| || ||||||| ||       ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  12263569 ttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaagtgtagacccacaatgatttaaaccaataagatagtgagtatt 12263470  T
Q  375 agagagagtgtt 386  Q
    ||||||||||||    
T  12263469 agagagagtgtt 12263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 33008151 - 33008288
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||       || ||||||||||||||| |||||||||||||| |||| |||||||    
T  33008151 ttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataaaagagagagtatt 33008250  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |   |||||||| |||||||||||||||| ||| |||||||    
T  33008251 a---agagtgttcaaaagagagtgttgctggcactcctcat 33008288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 6442213 - 6442346
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||| ||| ||||||||||||| ||||||||||||| || ||||       ||||||||||||||||| |||||||||||||| |||||||||||||    
T  6442213 tttattgtatgaaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgtagacccacaatgatttaaaccaataaaagagtgagtatta 6442312  T
Q  376 gagagagtgtttaaaagagagtgttgctagcatt 409  Q
     ||| |||||| |||||| |||||||||| ||||    
T  6442313 aagatagtgttcaaaagaaagtgttgctaacatt 6442346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 282 - 405
Target Start/End: Original strand, 11692226 - 11692356
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||||||||||||| |||| ||||||| ||||||       ||||||| || |||| | |||||||| |||| |||||||||||||    
T  11692226 ttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtgagtatt 11692325  T
Q  375 agagagagtgtttaaaagagagtgttgctag 405  Q
    |||||| ||||| ||||||||||||||||||    
T  11692326 agagagtgtgttcaaaagagagtgttgctag 11692356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 25686917 - 25686834
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||| |||| ||||||||||||||||| ||||    
T  25686917 ttcaaagtgtagacccacaatgatttaaaccaataagataatgagtattagaaagaatgttcaaaagagagtgttgctaacatt 25686834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 281 - 409
Target Start/End: Original strand, 14795177 - 14795310
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||||||||||||||||||| ||| ||| |||||||       |||||| | ||| ||| |||||||| |||||||||||||||||    
T  14795177 tttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtat 14795276  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcatt 409  Q
     |||||||||||| |||  |||||||||||||||||    
T  14795277 aagagagagtgttcaaa--agagtgttgctagcatt 14795310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 281 - 409
Target Start/End: Original strand, 15242169 - 15242302
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||||||||||||||||||| ||| ||| |||||||       |||||| | ||| ||| |||||||| |||||||||||||||||    
T  15242169 tttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttttaaagtgtatatccataatgatttaaactaataagagagtgagtat 15242268  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcatt 409  Q
     |||||||||||| |||  |||||||||||||||||    
T  15242269 aagagagagtgttcaaa--agagtgttgctagcatt 15242302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 282 - 402
Target Start/End: Original strand, 32205123 - 32205250
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||       ||||| |||  | ||||| |||||||| ||||||||||||||||||    
T  32205123 ttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaatttttaaagtataggtctacaatgatttaaactaataagagagtgagtatt 32205222  T
Q  375 agagagagtgtttaaaagagagtgttgc 402  Q
    ||||||  |||| |||||| ||||||||    
T  32205223 agagaggatgttcaaaagaaagtgttgc 32205250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 7775047 - 7775180
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||||       ||||| |||| | ||| |||||||| |||||| |||||| ||||    
T  7775047 ttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtggacc-agaatgatttaaacaaataagtgagtgaatatt 7775145  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||| |||||||| ||||| |||||||    
T  7775146 agagagagtgttcaaaagagaatgttgttagcatt 7775180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 333 - 409
Target Start/End: Original strand, 39254188 - 39254264
Alignment:
Q  333 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||||| ||||| |||||||    
T  39254188 tgtagacccacaataatttaaatcaataagagagtgagtgttaaagagagtgttcaaaagagaatgttgttagcatt 39254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 44350884 - 44350801
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||| |||||| ||||||||||| || |||||||||||||||||  ||||| |||||||||||||| |||||||    
T  44350884 ttcaaagtgtagactcacaatgatttaaaccaacaaaagagtgagtattagagatggtgttcaaaagagagtgttgttagcatt 44350801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 282 - 406
Target Start/End: Complemental strand, 32213002 - 32212872
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||| ||| | ||||| || ||||||       | ||||| |||||||| |||||||||||||||||||||||||||    
T  32213002 ttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagtatt 32212904  T
Q  375 agagagagtgtttaaaagagagtgttgctagc 406  Q
    | | || ||||| |||||||||||||||||||    
T  32212903 atatagggtgttcaaaagagagtgttgctagc 32212872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 282 - 368
Target Start/End: Complemental strand, 31502597 - 31502504
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtggg-------ttcaaagtgtagacccacaataatttaaaccaataagagagtg 368  Q
    |||||||||||| |||||| |||||||||||||||||||||| |       |||||||||||||| |||||| |||||||||||||||||||||    
T  31502597 ttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaattttcaaagtgtagactcacaatgatttaaaccaataagagagtg 31502504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 326 - 409
Target Start/End: Original strand, 7459441 - 7459524
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||| || |||  | |||||||||||||||    
T  7459441 ttcaaaatatagatccacaataatttaaaccaataaaagagtgagtattaaagagagtattcaaataaaagtgttgctagcatt 7459524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 333 - 404
Target Start/End: Complemental strand, 36845566 - 36845495
Alignment:
Q  333 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgcta 404  Q
    |||||||||||||| |||||||||||||||||||||| ||||  ||||||| || |||| ||||||||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtgaatattctagagagtattcaaaatagagtgttgcta 36845495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 337 - 407
Target Start/End: Original strand, 17749804 - 17749874
Alignment:
Q  337 gacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||| | |||||| ||||| ||||||||||| |||||||||||||  ||||||||||||||||||||    
T  17749804 gacccacattgatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgctagca 17749874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 24539193 - 24539123
Alignment:
Q  337 gacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||| | |||||| ||||| ||||||||||| |||||||||||||  ||||||||||||||||||||    
T  24539193 gacccacattgatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgttgctagca 24539123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 348 - 406
Target Start/End: Complemental strand, 38065386 - 38065328
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagc 406  Q
    |||||||||||||||| |||||||||| ||||||||||| || ||||||||||||||||    
T  38065386 atttaaaccaataagaaagtgagtatttgagagagtgttgaagagagagtgttgctagc 38065328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 31874117 - 31874174
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||    
T  31874117 aaagtgtagactcacaatgatttaaacctataagagagtgagtattcgagagagtgtt 31874174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 407
Target Start/End: Original strand, 45909501 - 45909636
Alignment:
Q  280 ctttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagaccc-acaataatttaaaccaataagagagtgagt 371  Q
    ||||||||||| || |||||||||||||||||||| ||| |||||||||       ||| |||||  || ||| | |||| | ||||||| |||||||||    
T  45909501 ctttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaattgtaggtcctacattgattttacccaataaaagagtgagt 45909600  T
Q  372 attagagagagtgtttaaaagagagtgttgctagca 407  Q
     ||||||||||| || ||||||||||||||||||||    
T  45909601 gttagagagagtattcaaaagagagtgttgctagca 45909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 413
Target Start/End: Original strand, 13919828 - 13919966
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagaccc-acaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||| || |||||||||||||||||||| ||| |||||||||       |||||||||  || ||| | |||| | |||||||  ||||||||  |    
T  13919828 tttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaggtcctacattgatttcacccaataaatgagtgagtgct 13919927  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  13919928 agagagagtgctcaaaagagagtgttgctagcattcctc 13919966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 329 - 401
Target Start/End: Original strand, 27320475 - 27320547
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttg 401  Q
    |||||||||||||||||| |||||||  ||||||| |||||||| |||||||||| || |||||||| |||||    
T  27320475 aaagtgtagacccacaattatttaaatgaataagaaagtgagtagtagagagagtattcaaaagagaatgttg 27320547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 42863569 - 42863617
Alignment:
Q  365 agtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  42863569 agtgagtgttagagagagtgtttaaaagtgagtgttgctagcattcctc 42863617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 7774944 - 7775009
Alignment:
Q  327 tcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaaga 393  Q
    ||||||||| |||| ||||| |||||||||||||||||||| | |||||||||||||||| ||||||    
T  7774944 tcaaagtgtggacc-acaatgatttaaaccaataagagagtaaatattagagagagtgttcaaaaga 7775009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 12167315 - 12167365
Alignment:
Q  336 agacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  12167315 agacccacaatgatttaaaccaataagaaagtgagtattaaagagagtgtt 12167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 19422912 - 19422850
Alignment:
Q  330 aagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaag 392  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||| ||||| |||||| |||||    
T  19422912 aagtgtagatccacaatgatttaaaccaataaaagagtgagtatcagagatagtgttcaaaag 19422850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 782 - 847
Target Start/End: Complemental strand, 29809544 - 29809481
Alignment:
Q  782 tagaactcctttagaaaacaaaagtatgcttcacttgggtaatcttaaaatatcaatttattaaaa 847  Q
    ||||||||||||| |||||||| ||||| |||||||||||||||||  |||||||||| |||||||    
T  29809544 tagaactcctttaaaaaacaaatgtatgtttcacttgggtaatctt--aatatcaattaattaaaa 29809481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 31502589 - 31502647
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| ||||||||| ||||||||| |||| ||||| ||||||||||||||||||||    
T  31502589 ccaataaaagagtgagtgttagagagactgttgaaaagtgagtgttgctagcattcctc 31502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 329 - 414
Target Start/End: Original strand, 31628100 - 31628185
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||||| |||| || || |||||||||||||||||||| ||||||| ||| |||||| |||||  ||||| | ||||||||||||    
T  31628100 aaagtgttgacctacgatgatttaaaccaataagagagtaagtattaaagatagtgttcaaaagcaagtgtcgttagcattcctca 31628185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 31759864 - 31759942
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||| ||||| | |||| |||||| ||||||||| | ||||||||||||  |||||||||||||| ||||||||||||||    
T  31759864 aaagtatagactcgcaatgatttaagccaataagaaaatgagtattagag--agtgtttaaaagagggtgttgctagcatt 31759942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 46994443 - 46994366
Alignment:
Q  328 caaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgcta 404  Q
    |||||||| |||||||| || |||||| ||||||| | ||||||| |||||||||| ||| |||||||||||||||||    
T  46994443 caaagtgtgagacccaccatgatttaagccaataaaaaagtgagtgttagagagagcgttaaaaagagagtgttgcta 46994366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 415
Target Start/End: Complemental strand, 19840937 - 19840877
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||||  ||||||||||| | |||| |||||||||||||||||||||||    
T  19840937 ccaataaaagagtgagtgctagagagagtgctcaaaatagagtgttgctagcattcctcat 19840877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 342 - 414
Target Start/End: Complemental strand, 33008172 - 33008100
Alignment:
Q  342 acaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||| |||| | ||||||| |||||||||  |||||| |||||| ||||| |||||||||||||||||||||    
T  33008172 acaatgatttcatccaataaaagagtgagtgctagagatagtgttcaaaagtgagtgttgctagcattcctca 33008100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 20954800 - 20954859
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||| ||||||| | ||||||| || ||||||||||| ||||||||||||||||||||    
T  20954800 atttaagccaataaaaaagtgagtgtttgagagagtgttgaaaagagagtgttgctagca 20954859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 411
Target Start/End: Complemental strand, 26703573 - 26703436
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagaccc-acaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||| || |||||||||||||| ||||| ||| |||||||||       |||||||||  || ||| | |||| | ||||||| |||||||||      
T  26703573 ttttattgggtgaaatcaatgtatgtctcaccactttatgtgggttccatttctaaagtgtaggtcctacatttatttcacccaataaaagagtgagtgc 26703474  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcc 411  Q
    ||||||||||| | | ||||||||||||||||||||||    
T  26703473 tagagagagtgctcagaagagagtgttgctagcattcc 26703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 404
Target Start/End: Complemental strand, 30742615 - 30742544
Alignment:
Q  333 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgcta 404  Q
    |||||||| ||||| ||||||| |||||||| | ||| |||||||| ||||||| |||| ||||||||||||    
T  30742615 tgtagacctacaatgatttaaatcaataagaaaatgaatattagagtgagtgttcaaaatagagtgttgcta 30742544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 2520688 - 2520630
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| ||||||||| || ||||||||||| ||||||||||||| |||||| |||||    
T  2520688 ccaataaaagagtgagtgttggagagagtgttgaaaagagagtgttcctagcactcctc 2520630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 17354660 - 17354614
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||    
T  17354660 ttttattggatgaaatcaatgtatgtcccaccactttatgtgggttc 17354614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 17354652 - 17354710
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| ||| ||||| |||||||||||| | |||| |||||||||||||||||||||    
T  17354652 ccaataaaagaatgagtgttagagagagtgctcaaaaaagagtgttgctagcattcctc 17354710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 22189994 - 22189932
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatgt 417  Q
    ||||||| |||||||||  ||||||||||||| ||||  ||||||| ||||||||||||||||    
T  22189994 ccaataaaagagtgagtgctagagagagtgttgaaaaatgagtgtttctagcattcctcatgt 22189932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 24539248 - 24539302
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| ||||||||| |||||||||||||  |||||||||||| |||||||||    
T  24539248 ccaataaaagagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatt 24539302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 27888337 - 27888279
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||| |||| |||||| |||||||||||| | ||||| ||||||||||||||||||||    
T  27888337 ccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttgctagcattcctc 27888279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 415
Target Start/End: Original strand, 10619535 - 10619576
Alignment:
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  10619535 tagagagagtgatcaaaagagagtgttgctagcattcctcat 10619576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 26190031 - 26190092
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    ||||||| ||||||||| ||||||| |||||| |||||||||||||| || || ||||||||    
T  26190031 ccaataaaagagtgagtgttagagaaagtgttcaaaagagagtgttgttatcactcctcatg 26190092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 25428605 - 25428665
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    |||||| |||||||||| || | |||||| | ||||||||||||||||||||||| |||||    
T  25428605 caataaaagagtgagtactaaaaagagtgctcaaaagagagtgttgctagcattcatcatg 25428665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 32178886 - 32178826
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    ||||||||||| || |||||| ||||||| |||||||||||||| ||| ||||||| ||||    
T  32178886 ttcaaagtgtatacacacaatgatttaaatcaataagagagtgattatcagagagattgtt 32178826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 32205131 - 32205076
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| ||||||||||   ||||||||||| ||||| ||||||||||||||||||||    
T  32205131 ccaataaaagagtgagta---gagagagtgttcaaaagtgagtgttgctagcattcctc 32205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 353 - 413
Target Start/End: Complemental strand, 37549681 - 37549621
Alignment:
Q  353 aaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||| ||||| |||  |||||| |||| | ||||||||||||||||||||||||||    
T  37549681 aaccaataaaagagtaagtgctagagaaagtgctcaaaagagagtgttgctagcattcctc 37549621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 413
Target Start/End: Original strand, 2520738 - 2520773
Alignment:
Q  378 gagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||| ||||||||||||||||||||||||||    
T  2520738 gagagtgttgaaaagagagtgttgctagcattcctc 2520773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 407
Target Start/End: Original strand, 12271109 - 12271152
Alignment:
Q  364 gagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||    
T  12271109 gagtgagtatcagagagggtgtttaaaagagagggttgctagca 12271152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 14759762 - 14759829
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| | ||||||| |||||| ||  ||| ||||||| | ||||||||||||||||||||||||||    
T  14759762 taatttcatccaataaaagagtgggtgctagggagagtgctcaaaagagagtgttgctagcattcctc 14759829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 412
Target Start/End: Complemental strand, 22786196 - 22786149
Alignment:
Q  365 agtgagtattagagagagtgtttaaaagagagtgttgctagcattcct 412  Q
    |||||||  ||||||||||| | |||||||||||||||||||||||||    
T  22786196 agtgagtgctagagagagtgctcaaaagagagtgttgctagcattcct 22786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 389
Target Start/End: Original strand, 28713063 - 28713170
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagaga 381  Q
    |||||||| ||| ||||||| |||||| ||||| ||||| || |||  |  |||||| | ||||| |||||||||||||| ||||| | ||||||||||     
T  28713063 ttttattgaatgaaatcaatatatgtctcaccactttgtatgagttttatttgtagatctacaatgatttaaaccaataaaagagtaaatattagagagt 28713162  T
Q  382 gtgtttaa 389  Q
    || |||||    
T  28713163 gtttttaa 28713170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 37490023 - 37490074
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    |||||||||||||||  ||||||| || ||||||||||| ||||||||||||    
T  37490023 atttaaaccaataagtaagtgagtgtttgagagagtgttgaaaagagagtgt 37490074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 17749749 - 17749695
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| ||||||||| |||||||||||||  |||| ||||||| |||||||||    
T  17749749 ccaataaaagagtgagtgttagagagagtgtccaaaaaagagtgtcgctagcatt 17749695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 19494472 - 19494426
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    ||||||||| || |||||||||||||||||||| ||| |||||||||    
T  19494472 ttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttc 19494426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 363 - 413
Target Start/End: Complemental strand, 27949320 - 27949270
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||| |||||||||||||| ||||| |||||||| |||| ||||||    
T  27949320 agagtgagtgttagagagagtgttaaaaagtgagtgttgttagctttcctc 27949270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 335 - 381
Target Start/End: Complemental strand, 31731328 - 31731282
Alignment:
Q  335 tagacccacaataatttaaaccaataagagagtgagtattagagaga 381  Q
    ||||||| | ||||||||||||||||||| | |||||||||||||||    
T  31731328 tagacccgcgataatttaaaccaataagaaaatgagtattagagaga 31731282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 342 - 379
Target Start/End: Original strand, 1316387 - 1316424
Alignment:
Q  342 acaataatttaaaccaataagagagtgagtattagaga 379  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  1316387 acaatgatttaaaccaataaaagagtgagtattagaga 1316424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 2911882 - 2911943
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| ||||||| | |||||||||| ||||||||||| |||||| |||||| ||| ||||    
T  2911882 atttaagccaataaaaaagtgagtattggagagagtgttgaaaagaaagtgttactaacatt 2911943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 19494464 - 19494521
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcct 412  Q
    ||||||| |||||||||| |||||| |||  | ||||||||||| |||||||||||||    
T  19494464 ccaataaaagagtgagtactagagaaagtactcaaaagagagtgctgctagcattcct 19494521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 374 - 407
Target Start/End: Complemental strand, 35549683 - 35549650
Alignment:
Q  374 tagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||||| ||||||||||||||||||||    
T  35549683 tagagagagtgttgaaaagagagtgttgctagca 35549650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 36845604 - 36845567
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataaga 363  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  36845604 ttcaaagtatagacccacaatgatttaaaccaataaga 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 42815685 - 42815746
Alignment:
Q  357 aataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatgtg 418  Q
    |||||||| |||||| ||| ||||||||||  |||||||||||| |||||||| ||| ||||    
T  42815685 aataagagggtgagtgttaaagagagtgttagaaagagagtgttcctagcatttctcttgtg 42815746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 43930068 - 43930129
Alignment:
Q  338 acccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    |||||||  ||||| | ||||||| ||||||||| ||||||||||||||  |||||||||||    
T  43930068 acccacatgaatttcacccaataaaagagtgagtgttagagagagtgttagaaagagagtgt 43930129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 282 - 417
Target Start/End: Original strand, 27859 - 28001
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||||||| |||||||||||||||||||||||||||    
T  27859 ttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataagagagtgagtatt 27958  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctcatgt 417  Q
    | |||||||||| ||||||| |||||||||||| | |||||||    
T  27959 aaagagagtgttcaaaagagggtgttgctagcactactcatgt 28001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 6e-40; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 41452028 - 41451894
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||       || ||||||||||||| |||||||||||||||||||||||||||    
T  41452028 ttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtagacccacaatgatttaaaccaataagagagtgagtatt 41451929  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||| ||||||||||||||||||||||    
T  41451928 agagagagtgttcaaaagagagtgttgctagcatt 41451894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 283 - 414
Target Start/End: Complemental strand, 18427282 - 18427146
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||||||||||||||||||||||||||    
T  18427282 tttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtatta 18427183  T
Q  376 gagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||| |||||   |||||||||||||||||| ||||||    
T  18427182 gagagggtgtt--caagagagtgttgctagcactcctca 18427146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 24734752 - 24734886
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||       || |||| |||||||| |||||||||||||||||||||||||||    
T  24734752 ttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaattttcaaagagtaggcccacaatgatttaaaccaataagagagtgagtatt 24734851  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||| ||||||||||||||||||||||    
T  24734852 agagagagtgttcaaaagagagtgttgctagcatt 24734886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 46450112 - 46450244
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccacca-ttttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||| ||||||||||||||||||||||||||    
T  46450112 ttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttctatttgcaaagtgtagacccacaatgatttaaaccaataagagagtgagtat 46450211  T
Q  374 tagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||| |||||| |||| ||||||||||    
T  46450212 tagagagagtg-ttaaaatagagcgttgctagca 46450244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 287 - 409
Target Start/End: Complemental strand, 52124084 - 52123955
Alignment:
Q  287 ttggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattagaga 379  Q
    ||||||| ||| |||||||||||||| |||||||| ||||||||       |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  52124084 ttggatgaaattaatgtatgtcccactattttgtgggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagaga 52123985  T
Q  380 gagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| ||||||||||||||||||||||    
T  52123984 gagtgttcaaaagagagtgttgctagcatt 52123955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 283 - 401
Target Start/End: Complemental strand, 20493577 - 20493452
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||| ||||||||||||||| |||| |||||| ||||||||       |||||||||||||||| ||||||||||||||||||||||||| ||    
T  20493577 tttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaatattcaaagtgtagacccacaatgatttaaaccaataagagagtgagtaata 20493478  T
Q  376 gagagagtgtttaaaagagagtgttg 401  Q
    ||||||||||| ||||||||||||||    
T  20493477 gagagagtgttcaaaagagagtgttg 20493452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 28529300 - 28529424
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| |  |||||||||||       ||||||||||||||||| |||||||||||||||||||||||||||    
T  28529300 ttttattggatgaaatcaatgtatgtcccaccact--gtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtatt 28529397  T
Q  375 agagagagtgtttaaaagagagtgttg 401  Q
    |||||| ||||| ||||||||||||||    
T  28529398 agagagggtgttcaaaagagagtgttg 28529424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 37776836 - 37776702
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||| |||| ||||||||||||||| |||| |||||||||||||||       |||||||||| ||||| |||||||||| ||||||||||||||||    
T  37776836 ttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaattttcaaagtgtagacctacaatgatttaaaccactaagagagtgagtatt 37776737  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| ||||| | || |||||||||||||||||    
T  37776736 agagagggtgttcataaaagagtgttgctagcatt 37776702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 20791343 - 20791475
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| ||| || | ||||       |||||||||| || |||| |||||||||||||||| ||||||||||    
T  20791343 ttttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtgagtatt 20791442  T
Q  375 agagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||||||| ||||||||||| ||||||||    
T  20791443 agagagagtgttcaaaagagagtggtgctagca 20791475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 27243092 - 27243233
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgta-gacccacaataatttaaaccaataagagagtgagtat 373  Q
    |||||||||||  |||||||| ||||||||||| ||| |||||||||       |||||||| |||||||| | |||||| ||||| |||||||||||||    
T  27243092 ttttattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaagtgtatgacccacattgatttaacccaatgagagagtgagtat 27243191  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||| |||||||| |||||||||||||||||||| |||||||    
T  27243192 tagaaagagtgttcaaaagagagtgttgctagcactcctcat 27243233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 282 - 414
Target Start/End: Complemental strand, 5452193 - 5452056
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||||||||| |||||||| ||||||||| |||||       ||||||||||||  |  ||||||| ||||||||||| |||||||    
T  5452193 ttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaattttctaagtgtagaccca--aggatttaaatcaataagagagcgagtatt 5452096  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
     ||||||||||| |||||||||||||||||||||| ||||    
T  5452095 ggagagagtgttcaaaagagagtgttgctagcattactca 5452056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 282 - 404
Target Start/End: Complemental strand, 8825112 - 8824983
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||| |||| ||||||| |||||||||||||||| || ||||||||       ||| || || ||||||||||||||||||||||||||||||||||    
T  8825112 ttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtctacactcacaataatttaaaccaataagagagtgagtatt 8825013  T
Q  375 agagagagtgtttaaaagagagtgttgcta 404  Q
    | |||||||||| |||| ||| ||||||||    
T  8825012 aaagagagtgttcaaaacagaatgttgcta 8824983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 14236066 - 14236198
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||||| |||||||||||| ||| || | ||||       |||||||||| ||||||||||||| |||||||| | ||||||||||    
T  14236066 ttttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataatttagaccaataaaaaagtgagtatt 14236165  T
Q  375 agagagagtgtttaaaagagagtgttgctagca 407  Q
    ||| |||||||| |||| |||||||||||||||    
T  14236166 agaaagagtgttcaaaacagagtgttgctagca 14236198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 55452148 - 55452037
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||       ||||||||||| || ||| |||||||||||| | ||||||||||||    
T  55452148 ttttattggatggaatacatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagactcataatgatttaaaccaatgaaagagtgagtatt 55452049  T
Q  375 agagagagtgtt 386  Q
    ||||||||||||    
T  55452048 agagagagtgtt 55452037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 29588815 - 29588732
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| ||| |||||||||| |||||||| | || ||||||||    
T  29588815 ttcaaagtgtagacccacaatgatttaaatcaataagagagtgagtgttatagagagtgttcaaaagagaattttactagcatt 29588732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 329 - 399
Target Start/End: Complemental strand, 50156739 - 50156669
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| |||||| |||||    
T  50156739 aaagtgtagacccacaatgatttaaaccaataagagagtgagtattacaaagagtgttcaaaagaaagtgt 50156669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 283 - 408
Target Start/End: Complemental strand, 15790501 - 15790370
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtg-tggg------ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||  |||||||||||||| ||||||||| || ||||      |||||||||||| || | ||| ||||||||||||||||||||||||||||    
T  15790501 tttattggataaaatcaatgtatgtctcaccattttatggtgggacaattttcaaagtgtaggcc-ataatgatttaaaccaataagagagtgagtatta 15790403  T
Q  376 gagagagtgtttaaaagagagtgttgctagcat 408  Q
    |||||| | || |||| ||||||||||||||||    
T  15790402 gagagattattcaaaaaagagtgttgctagcat 15790370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 282 - 398
Target Start/End: Original strand, 46160994 - 46161117
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||  |||||| |||| ||||||| |||||       |||||||||| ||| ||| |||||||||||||||||||||||||||    
T  46160994 ttttattggatgaaatcaatacatgtccgaccactttgtgttggttctatttccaaagtgtagatccataatgatttaaaccaataagagagtgagtatt 46161093  T
Q  375 agagagagtgtttaaaagagagtg 398  Q
    |||||||||||  || ||||||||    
T  46161094 agagagagtgtccaagagagagtg 46161117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 38414708 - 38414813
Alignment:
Q  296 atcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttta 388  Q
    |||||||||||||||||||||||||||||||| ||       |||||||| |||| ||||||||||||||||||||||||||| ||| ||||| || | |    
T  38414708 atcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataagagagtgagtgttaaagagaatgctca 38414807  T
Q  389 aaagag 394  Q
    ||||||    
T  38414808 aaagag 38414813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 355 - 416
Target Start/End: Complemental strand, 27243100 - 27243039
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| |||||||    
T  27243100 ccaataaaagagtgagtgttagagagagtgttcaaaagagagtgttgctagcatccctcatg 27243039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 304 - 413
Target Start/End: Original strand, 752461 - 752575
Alignment:
Q  304 atgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagag 396  Q
    ||||||||||| |||||||||||||       |||||||||||||||||| |||||||| ||||||||| ||||||||  | ||| |||| |||| ||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagtatt--atagactgttcaaaacagag 752558  T
Q  397 tgttgctagcattcctc 413  Q
    ||||||| |||||||||    
T  752559 tgttgctggcattcctc 752575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 415
Target Start/End: Complemental strand, 37600263 - 37600122
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagaccc-acaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||| || |||||||||||||||||||| ||| |||||||||       |||||||||  || ||| | | || ||||||||| |||||| ||      
T  37600263 ttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttctaaagtgtaggtcctacattgaattcaaccaataaaagagtgggtgc 37600164  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  37600163 tagagagagtgctcaaaagagagtgttgctagcattcctcat 37600122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 283 - 404
Target Start/End: Complemental strand, 2419596 - 2419468
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    |||||||||||||||||||| |||||| |||| ||||  || ||||       || ||||||||||||||| |||||||||||||||| |||||||||||    
T  2419596 tttattggatggaatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtatta 2419497  T
Q  376 gagagagtgtttaaaagagagtgttgcta 404  Q
     ||| |||||| |||| | | ||||||||    
T  2419496 aagaaagtgttcaaaaaacaatgttgcta 2419468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 326 - 400
Target Start/End: Original strand, 29755598 - 29755672
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgtt 400  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||  ||||||||| ||||||| |||||||||||||    
T  29755598 ttcaaagtgtagatcaacaatgatttaaaccaataagagggtaggtattagagggagtgttcaaaagagagtgtt 29755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 742057 - 742139
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||| ||| |  ||| |||| ||||||||||| |||||||||    
T  742057 aaagtgtagacccacaatgatttaaactaataagagaatgagtattatagaca--gttcaaaacagagtgttgctggcattcctc 742139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 490 - 562
Target Start/End: Complemental strand, 44815297 - 44815222
Alignment:
Q  490 ttgagttaaacctccgtattgcaaaaagcttttctaaattgttaaaataga---tggggatttttaacttttttct 562  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||||| |   ||||||||||| ||||||||||    
T  44815297 ttgagttaaacctccttattgcaaaaagcttttataaattgtttaaataaaaattggggattttttacttttttct 44815222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 355 - 415
Target Start/End: Complemental strand, 28529308 - 28529248
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||||  ||||||||||||| ||||| ||||||||||||||||||||||    
T  28529308 ccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcctcat 28529248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 329 - 404
Target Start/End: Original strand, 37285384 - 37285457
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgcta 404  Q
    |||||| |||||||||||||||||||||||||| | ||| ||||||  ||||||| ||||||| ||||||||||||    
T  37285384 aaagtgcagacccacaataatttaaaccaataaaaaagtaagtatt--agagagtctttaaaatagagtgttgcta 37285457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 326 - 413
Target Start/End: Complemental strand, 29388676 - 29388589
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||||||| |||||| ||||||  ||||||||||||| || |||||||||||||| |||| | | | ||| |||||||||||    
T  29388676 ttcaaagtgtagactcacaatgatttaagtcaataagagagtgggtgttagagagagtgttcaaaataaaatattgatagcattcctc 29388589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 38138664 - 38138589
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttg 401  Q
    |||||||| |||| ||||||| |||||||||||||||||||| ||||||| | | |||| | ||||||||||||||    
T  38138664 ttcaaagtatagatccacaatgatttaaaccaataagagagtaagtattaaataaagtgatcaaaagagagtgttg 38138589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 329 - 416
Target Start/End: Complemental strand, 41707518 - 41707433
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    ||||| |||||||||||||||||||||| |||||| | | ||| ||| |||||||||| |||| | ||||||||||||||||||||||    
T  41707518 aaagtatagacccacaataatttaaacc-ataagaaaataagtgttaaagagagtgttcaaaata-agtgttgctagcattcctcatg 41707433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 363 - 410
Target Start/End: Complemental strand, 52951423 - 52951376
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  52951423 agagtgagtatttgagagagtgttaaaaagagagtgttgctagcattc 52951376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 20493570 - 20493628
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||  |||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  20493570 ccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttgctagcattcctc 20493628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 24429104 - 24429050
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagt 383  Q
    |||||||||| ||||||| |||||||||||||| | |||||||||||||||||||    
T  24429104 aaagtgtagatccacaatgatttaaaccaataaaatagtgagtattagagagagt 24429050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 404
Target Start/End: Complemental strand, 24749029 - 24748913
Alignment:
Q  296 atcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagaccc-acaataatttaaaccaataagagagtgagtattagagagagtgttt 387  Q
    ||||||||||||||||||||||| |||||||||       |||||||||  || ||| | |||| | ||||||| ||||||||| |||||||||||| |     
T  24749029 atcaatgtatgtcccaccattttatgtgggttccatttctaaagtgtaggtcctacattgatttcatccaataaaagagtgagtgttagagagagtgctc 24748930  T
Q  388 aaaagagagtgttgcta 404  Q
    |||||||||||||||||    
T  24748929 aaaagagagtgttgcta 24748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 26310579 - 26310495
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtggg-------ttcaaagtgtagacccacaataatttaaaccaat 359  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||       ||||||||||||||||| ||| ||||||||||||    
T  26310579 ttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagacccataatgatttaaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 414
Target Start/End: Original strand, 44844082 - 44844168
Alignment:
Q  329 aaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    |||||||| |||||||||| |||||| ||||||| | ||||||| |||||||||||||  |||||||||| |||||| |||| ||||    
T  44844082 aaagtgtatgacccacaatgatttaatccaataaaaaagtgagtgttagagagagtgtcaaaaagagagtcttgctatcattactca 44844168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 46576003 - 46575945
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||||||||||| || ||||||||||| || ||||||||||| |||||||||||    
T  46576003 ccaataagagagtgagtgtttgagagagtgttgaagagagagtgttgatagcattcctc 46575945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 52951485 - 52951543
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||| |||||||||||  ||||||||||||| |||||||||||||||||||| |||||    
T  52951485 ccaatgagagagtgagtgctagagagagtgttaaaaagagagtgttgctagcactcctc 52951543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 329 - 406
Target Start/End: Original strand, 2009095 - 2009172
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagc 406  Q
    ||||||||||| |||||||||||||| |||||| | | ||| ||||||||||  ||||||||||||| ||||| ||||    
T  2009095 aaagtgtagactcacaataatttaaatcaataaaaaaatgaatattagagaggatgtttaaaagagaatgttgttagc 2009172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 282 - 413
Target Start/End: Original strand, 13809128 - 13809267
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgta-gacccacaataatttaaaccaataagagagtgagtat 373  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||       |||||| || |||||||| |  ||||| ||||||||||| ||| | |    
T  13809128 ttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatatgacccacattgttttaacccaataagagaatgaatgt 13809227  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| |||||  || | ||||||||||||||| |||||    
T  13809228 tagagaaagtgtccaagaaagagtgttgctagcaatcctc 13809267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 49418493 - 49418424
Alignment:
Q  335 tagacccacaataa-tttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgct 403  Q
    |||||||| ||||| |||||| |||||||||||||| || |||||||| |||| ||||||||||||||||    
T  49418493 tagacccataataaatttaaatcaataagagagtgaatactagagagaatgttcaaaagagagtgttgct 49418424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 41387659 - 41387719
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    ||||||||| ||||||||||| |||||| | ||||||||| |||||||| |||||||||||    
T  41387659 ttcaaagtgcagacccacaatgatttaatcaaataagagattgagtattggagagagtgtt 41387719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 380
Target Start/End: Complemental strand, 10948639 - 10948588
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagag 380  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||| ||||    
T  10948639 aaagtgtaaacccacaatgatttaaaccaataaaagagtgagtattaaagag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 410
Target Start/End: Complemental strand, 38928061 - 38928006
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    ||||||| ||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  38928061 ccaataaaagagtgagtgttagagaaagtgatcaaaagagagtgttgctagcattc 38928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 39186064 - 39186143
Alignment:
Q  328 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||| |  |||| ||||||| ||||||||||| | ||||| |||||||| || |||||||||||||| |||||    
T  39186064 caaagtgtagatctgcaatgatttaaatcaataagagagagggtattggagagagtattcaaaagagagtgttgatagca 39186143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 49072103 - 49072138
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataa 361  Q
    ||||||||||||||||||||||||||||||||||||    
T  49072103 ttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 50661649 - 50661700
Alignment:
Q  357 aataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcat 408  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  50661649 aataaaagagtaagtgttagagagagtgtttaaaagagagtgttgcttgcat 50661700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 5452185 - 5452243
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| ||||||| | ||| |||||||||| ||||| ||||||||||||||||||||    
T  5452185 ccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgttgctagcattcctc 5452243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 283 - 376
Target Start/End: Complemental strand, 19345132 - 19345032
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtggg-------ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||| |||||||||||||||||||| |||||  |||       |||||| ||||||| |||||| |||||||||||||| ||| | |||||||    
T  19345132 tttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataaaagaataagtatta 19345033  T
Q  376 g 376  Q
    |    
T  19345032 g 19345032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 374 - 416
Target Start/End: Complemental strand, 29775175 - 29775133
Alignment:
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    ||||||||||| | |||||||||||||||||||||||||||||    
T  29775175 tagagagagtgctcaaaagagagtgttgctagcattcctcatg 29775133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 43016533 - 43016599
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||||| |||||||||||||||||||| || | ||||| |||| |||||||| |||||||| ||||    
T  43016533 atttaaatcaataagagagtgagtattacagtgggtgttcaaaatagagtgtttctagcattactca 43016599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 46237179 - 46237133
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    |||||||||||| |||||||||||||||||||| ||| |||||||||    
T  46237179 ttttattggatgaaatcaatgtatgtcccaccactttatgtgggttc 46237133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 18722572 - 18722535
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgt 320  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  18722572 tttattggatgaaatcaatgtatgtcccaccattttgt 18722535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 48543252 - 48543329
Alignment:
Q  338 acccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||||  ||||| | ||||||||||||||||| || |||||||||||  ||||||||||||  ||||| |||||||    
T  48543252 acccacatgaatttcacccaataagagagtgagtgttggagagagtgttagaaagagagtgttcatagcactcctcat 48543329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 10769869 - 10769909
Alignment:
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  10769869 tagagagagtgctcaaaagagagtgttgctagcattcctca 10769909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 373 - 409
Target Start/End: Complemental strand, 13809119 - 13809083
Alignment:
Q  373 ttagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13809119 ttagagagagtgtgtaaaagagagtgttgctagcatt 13809083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 29235702 - 29235658
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  29235702 ccaataagagagtgagtgttagagagagtgttagaaagagagtgt 29235658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 41452020 - 41452080
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||||| ||||||  ||||| ||||| |||||||||||| |||||||||    
T  41452020 ccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctcat 41452080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 409
Target Start/End: Original strand, 48351483 - 48351617
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||  ||||||| |||||| ||| | ||||||||||||||       ||||||| | ||| ||| ||||||| ||||||||||  |||||||    
T  48351483 ttttattggataaaatcaatatatgtctcactactttgtgtgggttcaattttcaaagtgtatatccataatgatttaaatcaataagagaaagagtatt 48351582  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||| | |||| |||||||| ||| | |||||||    
T  48351583 agagaaaatgttcaaaagagaatgtcgttagcatt 48351617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 399
Target Start/End: Original strand, 54187055 - 54187099
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||    
T  54187055 ccaataagagagtgagtgttagagagagtgttagaaagagagtgt 54187099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 416
Target Start/End: Original strand, 37776830 - 37776889
Alignment:
Q  357 aataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    ||||| |||||||||  | |||| |||||| ||||| |||||||||||||||||||||||    
T  37776830 aataaaagagtgagtgctggagaaagtgttgaaaagtgagtgttgctagcattcctcatg 37776889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 409
Target Start/End: Complemental strand, 55283151 - 55283108
Alignment:
Q  366 gtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||    
T  55283151 gtgagtattagagagaatgtttaaaaaagagtgttgttagcatt 55283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 24734760 - 24734702
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||||||| ||||||  ||||| ||||| |||||||||||| |||||||    
T  24734760 ccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttgctagtattcctc 24734702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 37600255 - 37600313
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||| ||  ||||||||||| | |||||||||||||| |||||||||||    
T  37600255 ccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 37600313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 284 - 407
Target Start/End: Original strand, 46575997 - 46576126
Alignment:
Q  284 ttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgta-gacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||| || || ||||||||||||||||| ||| |||||||||       ||| |||| | |||||| | |||||| || || |||||||||||||||    
T  46575997 ttattggctgaaaccaatgtatgtcccaccactttttgtgggttccattttcaaaatgtacgccccacattgatttaaccctattagagagtgagtatta 46576096  T
Q  376 gagagagtgtttaaaagagagtgttgctagca 407  Q
     |||||||||| |||  |||||||||||||||    
T  46576097 aagagagtgttgaaa--agagtgttgctagca 46576126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 53655466 - 53655400
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    |||||| ||||| ||| ||||||| || ||||||||||| |||||||| |||  |||||||||||||    
T  53655466 atttaagccaattagaaagtgagtgttggagagagtgttgaaaagagaatgtccctagcattcctca 53655400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 54140945 - 54140887
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||  ||||||||  |||||| |||| | ||||||||||||||||||||||||||    
T  54140945 ccaataaatgagtgagtgctagagaaagtgctcaaaagagagtgttgctagcattcctc 54140887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 22606909 - 22606946
Alignment:
Q  372 attagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  22606909 attagagagggtgtttaaaagagagtgttgttagcatt 22606946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 410
Target Start/End: Complemental strand, 22856316 - 22856234
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    ||||||||||||| ||||||| |||||||||||||  ||||| ||| |   ||||| |||| |||| ||||||||| ||||||||    
T  22856316 ttcaaagtgtagatccacaattatttaaaccaatagaagagttagtgt--cagagaatgttcaaaaaagagtgttgttagcattc 22856234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 357 - 398
Target Start/End: Complemental strand, 38602861 - 38602820
Alignment:
Q  357 aataagagagtgagtattagagagagtgtttaaaagagagtg 398  Q
    ||||| ||||||||||||||||||||||||  ||||||||||    
T  38602861 aataaaagagtgagtattagagagagtgttagaaagagagtg 38602820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 43657872 - 43657933
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| ||||| ||| ||||||| || || | |||||| ||||||||||||||||||||||    
T  43657872 atttaagccaattagaaagtgagtgttggaaacagtgttaaaaagagagtgttgctagcatt 43657933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 46450100 - 46450063
Alignment:
Q  377 agagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  46450100 agagagtgttcaaaagtgagtgttgctagcattcctca 46450063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 2e-39; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 282 - 408
Target Start/End: Original strand, 34905383 - 34905516
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||||||       ||||||||||||||||| |||||||||||||||||||||||||||    
T  34905383 ttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtatt 34905482  T
Q  375 agagagagtgtttaaaagagagtgttgctagcat 408  Q
    |||||| ||||| |||||||||||||||||||||    
T  34905483 agagagggtgttcaaaagagagtgttgctagcat 34905516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 281 - 400
Target Start/End: Complemental strand, 32112851 - 32112725
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||||       ||||||||||| ||||||| ||||||| |||||||||||||| |||    
T  32112851 tttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatat 32112752  T
Q  374 tagagagagtgtttaaaagagagtgtt 400  Q
    |||||||| |||| |||||||||||||    
T  32112751 tagagagaatgttcaaaagagagtgtt 32112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 281 - 409
Target Start/End: Original strand, 5106344 - 5106479
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtggg-------ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||       ||||||||||| ||||||||  |||||||||||||| ||||||| |||    
T  5106344 tttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtacacccacaaggatttaaaccaataatagagtgaatat 5106443  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| ||||| ||||||| |||||| |||||||    
T  5106444 tagagagtgtgttcaaaagagggtgttgttagcatt 5106479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 281 - 409
Target Start/End: Original strand, 1392674 - 1392808
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||||||||||||| ||| | ||||| || ||||||       | ||||| |||||||| ||||||||||||||||||||||||||    
T  1392674 tttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagtat 1392772  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||| || ||||| ||||||||||||||||||||||    
T  1392773 tagatagggtgttcaaaagagagtgttgctagcatt 1392808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 326 - 406
Target Start/End: Complemental strand, 16852055 - 16851975
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagc 406  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||  |||| |||||||||||||||||||    
T  16852055 ttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtattagggaggatgttcaaaagagagtgttgctagc 16851975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 282 - 416
Target Start/End: Complemental strand, 32599081 - 32598940
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||||||||||||  ||||||||||| ||| ||||||||||| |       ||||||||||  |||||| ||||||| |||||| ||||||||||||    
T  32599081 ttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtgagtatt 32598982  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    | ||||| ||||||||||||| |||||||| |||| ||||||    
T  32598981 aaagagaatgtttaaaagagaatgttgctaacatttctcatg 32598940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 281 - 386
Target Start/End: Original strand, 445864 - 445976
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||||||||       ||| ||||  |||||| |||||||||||||||||| |||||||    
T  445864 tttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaattttcaaagtctagagtcacaatgatttaaaccaataagagaatgagtat 445963  T
Q  374 tagagagagtgtt 386  Q
    |||||||||||||    
T  445964 tagagagagtgtt 445976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 21987339 - 21987471
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||||||||| |||||||| ||| || | ||||       |||||||||| || |||| |||||||||||||||| ||||||||||    
T  21987339 ttttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtgagtatt 21987438  T
Q  375 agagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||||||| ||||||| ||| ||||||||    
T  21987439 agagagagtgttcaaaagagggtggtgctagca 21987471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 31116254 - 31116146
Alignment:
Q  285 tattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtattaga 377  Q
    ||||||||| |||||||||||||||||| | |||||||| ||||       || ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  31116254 tattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgtaaacccacaatgatttaaaccaataagagagtgagtattaga 31116155  T
Q  378 gagagtgtt 386  Q
    |||||||||    
T  31116154 gagagtgtt 31116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 16187514 - 16187433
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||| ||||    
T  16187514 ttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--agagtgttgaaaagagagtgttgctaacatt 16187433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 16187732 - 16187651
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||| ||||    
T  16187732 ttcaaagtgtagacctacaattatttaaaccaataagcgagtgagtattag--agagtgttgaaaagagagtgttgctaacatt 16187651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 12753836 - 12753754
Alignment:
Q  332 gtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    ||||| || |||||| |||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  12753836 gtgtacactcacaatgatttaaactaataaaagagcgagtattagagagagtgttgaaaagagagtgttgctagtattcctca 12753754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 10133240 - 10133165
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttg 401  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||||||||| || |||| || ||||||||||||||    
T  10133240 ttcaaagtgtagaaccacaatgatttaaaccaataaaagagtgagtattaaagtgagtattcaaaagagagtgttg 10133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 295 - 409
Target Start/End: Original strand, 16436125 - 16436245
Alignment:
Q  295 aatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttt 387  Q
    |||||||||||| |||||||||||||||||||||       |||||||||||||| ||  ||||||||||||||  || ||| ||||| | |||||||||    
T  16436125 aatcaatgtatg-cccaccattttgtgtgggttctatttctaaagtgtagacccaaaaagatttaaaccaataatcgactgaatattaaaaagagtgttt 16436223  T
Q  388 aaaagagagtgttgctagcatt 409  Q
    ||||||||||||||||| ||||    
T  16436224 aaaagagagtgttgctaacatt 16436245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 282 - 415
Target Start/End: Complemental strand, 19090348 - 19090207
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagaccc-acaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||| || |||||||||||||||||||| ||| |||||||||       |||||||||  || ||| | | || ||||||||| |||||||||      
T  19090348 ttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtgc 19090249  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  19090248 tagagagagtgctcaaaagagagtgttgctagcattcctcat 19090207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 326 - 400
Target Start/End: Complemental strand, 8441931 - 8441857
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgtt 400  Q
    |||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||| |||| | ||||||    
T  8441931 ttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaaaatagtgtt 8441857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 326 - 400
Target Start/End: Complemental strand, 8450735 - 8450661
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgtt 400  Q
    |||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||| |||| | ||||||    
T  8450735 ttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaaaaatagtgtt 8450661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 281 - 394
Target Start/End: Complemental strand, 12780893 - 12780773
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    |||||||| | ||||||||||||||||| ||| | ||||||| |||||||       |||||||| ||||||| ||||||||||||||| || ||| |||    
T  12780893 tttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatgaatat 12780794  T
Q  374 tagagagagtgtttaaaagag 394  Q
    ||||||| ||||| |||||||    
T  12780793 tagagagggtgttcaaaagag 12780773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 2675942 - 2676053
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||| ||| | |||||||||||||||||| ||||| | ||||       |||| ||||||||||||||  ||||||||||||| | ||||||||||    
T  2675942 ttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtagacccacaatggtttaaaccaataaaaaagtgagtatt 2676041  T
Q  375 agagagagtgtt 386  Q
    ||||||||||||    
T  2676042 agagagagtgtt 2676053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 394
Target Start/End: Complemental strand, 17144804 - 17144685
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||| ||| ||||||| ||||| ||||| |||||||| ||||       ||||||||||||||||||| |||||||| |||||  |||| ||||||    
T  17144804 ttttattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaactaataaaggagtaagtatt 17144705  T
Q  375 agagagagtgtttaaaagag 394  Q
    | |||||||| |||||||||    
T  17144704 aaagagagtggttaaaagag 17144685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 32439548 - 32439471
Alignment:
Q  338 acccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||||  ||||| | ||||||||||||||||| ||||||||||||||| ||||||||||||  ||||| |||||||    
T  32439548 acccacatgaatttcacccaataagagagtgagtgttagagagagtgtttgaaagagagtgttcatagcactcctcat 32439471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 32122843 - 32122953
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||| ||||||| ||||||||||||||||||| | |||||       ||||||||||||||||| |||||| ||||||| | ||||| || ||    
T  32122843 tttattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgtagacccacaatgatttaagccaataaaaaagtgaataata 32122942  T
Q  376 gagagagtgtt 386  Q
    |||| ||||||    
T  32122943 gagatagtgtt 32122953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 12327338 - 12327292
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  12327338 ttttattggatagaatcaatgtatgtcctaccattttgtgtgggttc 12327292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 19305789 - 19305833
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  19305789 agagtgaggattagagatagtgtttaaaagagagtgttgctagca 19305833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 411
Target Start/End: Complemental strand, 19737487 - 19737431
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcc 411  Q
    ||||||| |||||||||  |||||||| |||| ||||||||||||||||||||||||    
T  19737487 ccaataaaagagtgagtgatagagagaatgttcaaaagagagtgttgctagcattcc 19737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 34905391 - 34905337
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  34905391 ccaataaaagagtgagtgttagagagagtgttgaaaaatgagtgttgctagcatt 34905337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 12690316 - 12690247
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||| | ||||||| ||||  ||| ||||||||||||||||||| |||||||  ||||||||||||||    
T  12690316 taatttcatccaataaaagagcaagtgttagagagagtgtttaaaatagagtgtccctagcattcctcat 12690247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 413
Target Start/End: Complemental strand, 10060912 - 10060856
Alignment:
Q  357 aataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||| ||||||| | ||| | |||||||| ||||||||||||||||||||||||||    
T  10060912 aataaaagagtgattgttataaagagtgttcaaaagagagtgttgctagcattcctc 10060856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 342 - 410
Target Start/End: Original strand, 10133270 - 10133338
Alignment:
Q  342 acaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    |||||||||| | |||||||  |||||||| |||||||||||||| ||||| ||||||| ||| |||||    
T  10133270 acaataatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgtttctaccattc 10133338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 35128848 - 35128900
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||| ||||||| |  ||||||||||||| ||||||||||||||||||||    
T  35128848 ccaataaaagagtgactgctagagagagtgttcaaaagagagtgttgctagca 35128900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 12785021 - 12784938
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||| ||| ||| |||||||||||||||||| ||  ||||||| || || || |||||| | | |||||||||||    
T  12785021 ttcaaagtgtagatccataatgatttaaaccaataagagaatggatattagaaagggtattcaaaagacaatattgctagcatt 12784938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 6531423 - 6531481
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||||||  | ||||||||  | ||||||||||||||||||||||||||    
T  6531423 ccaataaaagagtgagtgctggagagagtcctcaaaagagagtgttgctagcattcctc 6531481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 8441962 - 8442020
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||  |||||||| |||||||||||||| ||||  ||||| ||||||||||||||    
T  8441962 ccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcctc 8442020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 8450766 - 8450824
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||  |||||||| |||||||||||||| ||||  ||||| ||||||||||||||    
T  8450766 ccaataaatgagtgagtgttagagagagtgttgaaaaatgagtgctgctagcattcctc 8450824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 10060987 - 10061045
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| | ||||||| |||||||||||| | |||||||||||||||||  |||||||    
T  10060987 ccaataaaaaagtgagtgttagagagagtgctcaaaagagagtgttgctaatattcctc 10061045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 19090340 - 19090398
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||| ||  ||||||||||| | |||||||||||||| |||||||||||    
T  19090340 ccaataaaagagtgggtgctagagagagtgctcaaaagagagtgttgttagcattcctc 19090398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 13001812 - 13001873
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||| ||||||| ||||  ||||||  ||||||||||||||| | |||||||    
T  13001812 atttaaaccaataaaagagtgaatattgaagagagaatttaaaagagagtgtcgttagcatt 13001873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 343 - 384
Target Start/End: Complemental strand, 20128839 - 20128798
Alignment:
Q  343 caataatttaaaccaataagagagtgagtattagagagagtg 384  Q
    |||||||||||||||||||| ||||||||| || ||||||||    
T  20128839 caataatttaaaccaataagggagtgagtactaaagagagtg 20128798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 22204031 - 22204072
Alignment:
Q  343 caataatttaaaccaataagagagtgagtattagagagagtg 384  Q
    |||||||||||||||||||| ||||||||| || ||||||||    
T  22204031 caataatttaaaccaataagggagtgagtactaaagagagtg 22204072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 348 - 413
Target Start/End: Original strand, 29610355 - 29610420
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||| ||||||  ||||||| || ||||||||||| ||||||||||||   |||||||||||    
T  29610355 atttaaactaataagcaagtgagtgtttgagagagtgttgaaaagagagtgtcattagcattcctc 29610420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 5e-34; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 34861320 - 34861191
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaaagtgtaga--cccacaataatttaaaccaataagagagtgagtattagaga 379  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||  |  | |  |||||||||||||||||||||||||||||||||||||| ||    
T  34861320 ttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaattttcaaagtcccacaataatttaaaccaataagagagtgagtattaggga 34861221  T
Q  380 gagtgtttaaaagagagtgttgctagcatt 409  Q
    | ||||| ||||||||||||||||||||||    
T  34861220 gggtgttcaaaagagagtgttgctagcatt 34861191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 326 - 409
Target Start/End: Original strand, 16983492 - 16983575
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16983492 ttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 16983575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 35151862 - 35151728
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||||||||||||||||||||||||| || |||||       |||||||||||||||||||| |||| ||||||| ||||| ||||    
T  35151862 ttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaatttttaaagtgtagacccacaataattcaaactaataagaaagtgaatatt 35151763  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    | | |||||||| ||||||||||||||||||||||    
T  35151762 aaatagagtgttcaaaagagagtgttgctagcatt 35151728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 36804970 - 36804846
Alignment:
Q  284 ttattggatggaatcaatgtatgtcccaccattttgtgtgggt-------tcaaagtgtagacccacaataatttaaaccaataagagagtgagtattag 376  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||| | || | ||||||||||||||| |||||||||||| ||||||||    
T  36804970 ttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatttaaatcaataagagagtaagtattag 36804871  T
Q  377 agagagtgtttaaaagagagtgttg 401  Q
    ||||| |||| ||||||||||||||    
T  36804870 agagaatgttgaaaagagagtgttg 36804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 326 - 415
Target Start/End: Complemental strand, 6098859 - 6098770
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| || |||| |||||    
T  6098859 ttcaaagtgtagatccacaataatttaaatcaataagagagtgagtattagagagaatgtttaaaagagagtgttgttatcattgctcat 6098770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 17499366 - 17499234
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||       |||||||| ||||||| |||||||||||||||||||||||||||    
T  17499366 ttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtatt 17499267  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||  | |||  |||||||||||||||||    
T  17499266 agagagagttgtcaaa--agagtgttgctagcatt 17499234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 287 - 409
Target Start/End: Complemental strand, 1977301 - 1977172
Alignment:
Q  287 ttggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattagaga 379  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||       |||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  1977301 ttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaattttcaaagtgtagatccacaatgatttaaaccaataaaagagtgagtattagaga 1977202  T
Q  380 gagtgtttaaaagagagtgttgctagcatt 409  Q
    | ||||| ||||||| ||||| ||||||||    
T  1977201 gtgtgttcaaaagagtgtgttactagcatt 1977172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 281 - 413
Target Start/End: Complemental strand, 13407458 - 13407318
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgta-gacccacaataatttaaaccaataagagagtgagta 372  Q
    ||||||||||||  ||||||||||||||||||||||||  ||||||||       |||||||| |||||||| | |||||| ||||| ||||| |||||     
T  13407458 tttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgatttaacccaatgagagaatgagtg 13407359  T
Q  373 ttagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  13407358 ttagagagagtgttcaaaagagagtgttgctagcattcctc 13407318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 281 - 415
Target Start/End: Original strand, 13214541 - 13214682
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||||||| ||||||||||||| |||||||||| | ||||       |||||||||||||||||| | ||||| |||||||||| ||||||    
T  13214541 tttttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaatattataaactaataagagagcgagtat 13214640  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||| ||||||||| |||| ||| ||||||||| ||| |||||    
T  13214641 tagggagagtgttcaaaatagaatgttgctagtattactcat 13214682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 24056007 - 24055932
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttg 401  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  24056007 ttcaaagtgtagacccacaattatttaaaccaataagagagtgagtgttagagaaagtgttcaaaagagagtgttg 24055932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 285 - 406
Target Start/End: Original strand, 5979930 - 5980057
Alignment:
Q  285 tattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattaga 377  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||       |||||  || ||||||  ||||| |||||||||||||||||||||||    
T  5979930 tattggatgagatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtgaactcacaatggtttaa-ccaataagagagtgagtattaga 5980028  T
Q  378 gagagtgtttaaaagagagtgttgctagc 406  Q
    ||||||||| |||||||||||||||||||    
T  5980029 gagagtgttcaaaagagagtgttgctagc 5980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 272 - 380
Target Start/End: Original strand, 43506572 - 43506687
Alignment:
Q  272 aacactccctttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagag 364  Q
    ||||||| |||||||||||||  ||||||||||||| |||||| |||||||||||||       || ||||||||||||||| |||||| ||||||||||    
T  43506572 aacactcactttttattggatataatcaatgtatgttccaccactttgtgtgggttctactttcaatgtgtagacccacaatgatttaagccaataagag 43506671  T
Q  365 agtgagtattagagag 380  Q
    ||||||||||||||||    
T  43506672 agtgagtattagagag 43506687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 283 - 415
Target Start/End: Original strand, 8903900 - 8904039
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    |||||| |||| |||||||||||||||||||| ||||||| ||||||       ||||||||||||||||| |||||||||||||||||||| |||| ||    
T  8903900 tttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtaagtaata 8903999  T
Q  376 gagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    || |   |||| |||||||||||||| ||| ||| |||||    
T  8904000 gaaaagatgttcaaaagagagtgttgttagtattactcat 8904039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 32072144 - 32072255
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||       |||||||||||||||| ||||||| |||||||||| || | |||    
T  32072144 ttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaattatttaaatcaataagagaatgggcatt 32072243  T
Q  375 agagagagtgtt 386  Q
    ||||||||||||    
T  32072244 agagagagtgtt 32072255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 281 - 404
Target Start/End: Complemental strand, 9952891 - 9952762
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||||||| ||||||||||| |||||||| ||||||       |||||| ||||||||| |||||||||||||||| | |||||||    
T  9952891 tttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccacaatgatttaaaccaataagataatgagtat 9952792  T
Q  374 tagagagagtgtttaaaagagagtgttgcta 404  Q
    |  |||||||| || ||||||||||||||||    
T  9952791 ttaagagagtg-ttcaaagagagtgttgcta 9952762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 7493424 - 7493353
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagt 397  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  7493424 ttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagaaagagtgttcataagagagt 7493353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 342 - 415
Target Start/End: Complemental strand, 5095826 - 5095753
Alignment:
Q  342 acaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||| |||||||||||||||||||||||||||||||||  |||||||||| ||||||| |||||||| |||||    
T  5095826 acaatgatttaaaccaataagagagtgagtattagagaggatgtttaaaagtgagtgttcctagcattgctcat 5095753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 281 - 409
Target Start/End: Complemental strand, 28414003 - 28413869
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    |||||||| |||| |||||||||||||||||||| |||||||| ||||||       ||| |||||||| ||| |||||||||||||| ||| |||||||    
T  28414003 tttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtatagacccataatgatttaaaccaataaaagaatgagtat 28413904  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||| | ||||||| ||||||||||  ||||||||||    
T  28413903 tag-gcgagtgttcaaaagagagtactgctagcatt 28413869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 6387608 - 6387749
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgta-gacccacaataatttaaaccaataagagagtgagtat 373  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||       |||||| || |||||||| |  ||||| ||||||||||| ||||| |    
T  6387608 ttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaagtatacgacccacattgttttaacccaataagagaatgagtgt 6387707  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||||  ||||| || ||||||||||| |||||||    
T  6387708 tagagagagtgtccaaaagggattgttgctagcaatcctcat 6387749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 298 - 386
Target Start/End: Original strand, 8914834 - 8914929
Alignment:
Q  298 caatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    ||||||||||||||||| ||||||||||||||       ||||||||||||||||| ||||||||||||||||||||| ||   ||||||||||||    
T  8914834 caatgtatgtcccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtgacagagagagtgtt 8914929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 14236439 - 14236496
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||    
T  14236439 aaagtgtaggcgcacaataatttaaaccaacaagagagtgagtattagagagagtgtt 14236496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 23685178 - 23685306
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| ||| || | ||||       ||||||||||  | |||| |||||||||||||||    | ||||||    
T  23685178 ttttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagattcgcaatgatttaaaccaataag----ttagtatt 23685273  T
Q  375 agagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||||||| ||||||||||| ||||||||    
T  23685274 agagagagtgttcaaaagagagtggtgctagca 23685306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 17915926 - 17915986
Alignment:
Q  342 acaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgc 402  Q
    ||||| |||||||| ||||| | ||||||||||||||||||||||||||| ||||||||||    
T  17915926 acaatgatttaaactaataataaagtgagtattagagagagtgtttaaaaaagagtgttgc 17915986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 41727490 - 41727588
Alignment:
Q  295 aatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    |||||||||||||||||||  ||||||| |||||       || |||||||| || ||| ||||||||||| |||||||||||||||||||||||||||    
T  41727490 aatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtgtagactcataatgatttaaaccaacaagagagtgagtattagagagagtgtt 41727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 283 - 383
Target Start/End: Complemental strand, 17741659 - 17741552
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtggg-------ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||| ||||||||||||||||||||||||||| | |       ||||||||||||||| | |||  |||||||||||||   | |||||||||    
T  17741659 tttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataaagaaatgagtatta 17741560  T
Q  376 gagagagt 383  Q
    ||||||||    
T  17741559 gagagagt 17741552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 338 - 399
Target Start/End: Complemental strand, 28700625 - 28700564
Alignment:
Q  338 acccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    |||||||  ||||||| ||||||||||||||||| ||||||||||||||  |||||||||||    
T  28700625 acccacataaatttaacccaataagagagtgagtgttagagagagtgttagaaagagagtgt 28700564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 348 - 413
Target Start/End: Original strand, 38091471 - 38091536
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| ||||| ||| ||||||| || ||||||||||| |||||||| |||||||||||||||||    
T  38091471 atttaagccaattagaaagtgagtgttggagagagtgttgaaaagagaatgttgctagcattcctc 38091536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 401
Target Start/End: Original strand, 4675004 - 4675079
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttg 401  Q
    |||||||||||| | |||||| |||||||||||||| | | ||| ||||||| |||||||| |||| |||||||||    
T  4675004 ttcaaagtgtagtcacacaatgatttaaaccaataaaaaaatgaatattagaaagagtgttcaaaatagagtgttg 4675079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 408
Target Start/End: Original strand, 8671070 - 8671129
Alignment:
Q  349 tttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcat 408  Q
    ||||||| ||||| | |||||||||||||||||| ||| |||||||| ||||||||||||    
T  8671070 tttaaactaataaaatagtgagtattagagagagcgttcaaaagagaatgttgctagcat 8671129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 409
Target Start/End: Original strand, 9193480 - 9193563
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||| ||||||||| |||||||||| | | || ||||||  ||  ||||  ||||||||||||||||||||||    
T  9193480 ttcaaagtgtagacctacaataattaaaaccaataaaaaaatgtgtattaatgatcgtgtacaaaagagagtgttgctagcatt 9193563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 400
Target Start/End: Original strand, 31301162 - 31301286
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtggg-------ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||||||||||| |||||| |||||||| |       ||||| |||||||  || |||||||||||||||||||||| ||| ||||    
T  31301162 ttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtaga-tcataataatttaaaccaataagagaatgaatatt 31301260  T
Q  375 agagagagtgtttaaaagagagtgtt 400  Q
     |||| | |||  |||||||||||||    
T  31301261 tgagataatgtacaaaagagagtgtt 31301286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 282 - 359
Target Start/End: Complemental strand, 3099775 - 3099691
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtagacccacaataatttaaaccaat 359  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||       |||||| ||| | |||||||||||||||||||    
T  3099775 ttttattagatggaatcaatgtatgttccaccattttgtgtgagttatatttccaaagtatagtctcacaataatttaaaccaat 3099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 34952500 - 34952458
Alignment:
Q  371 tattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  34952500 tattagagagagtgttaaaaagtgagtgttgctagcattcctc 34952458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 1961402 - 1961439
Alignment:
Q  372 attagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  1961402 attagagagagtgttcaaaagagagtgttgctagcatt 1961439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 5727346 - 5727403
Alignment:
Q  342 acaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    ||||| |||||||||||||| | |||||||| ||||||| |||||||||||| |||||    
T  5727346 acaatgatttaaaccaataaaaaagtgagtactagagagggtgtttaaaagaaagtgt 5727403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 359 - 415
Target Start/End: Original strand, 11574160 - 11574216
Alignment:
Q  359 taagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||||| ||| |||||||||| ||||||||||||| ||| |||| |||||    
T  11574160 taagagagtgagtgttaaagagagtgttcaaaagagagtgttcctaacattactcat 11574216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 11962763 - 11962681
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||| ||| ||| |||||||||||||| | || ||||||||   |||||||| |||||||  |||||||||||||    
T  11962763 ttcaaagtgtagatcca-aatgatttaaaccaataaaaaagcgagtattaacaagagtgttcaaaagaggatgttgctagcatt 11962681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 12212205 - 12212126
Alignment:
Q  328 caaagtgtag-acccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagc 406  Q
    |||||||||| ||||||| | |||| | |||| || ||||||| | ||||||||| |||| |||||||||||||||||||    
T  12212205 caaagtgtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgctagc 12212126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 12456633 - 12456554
Alignment:
Q  328 caaagtgtag-acccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagc 406  Q
    |||||||||| ||||||| | |||| | |||| || ||||||| | ||||||||| |||| |||||||||||||||||||    
T  12456633 caaagtgtaggacccacattgatttcacccaagaaaagagtgaatgttagagagaatgttgaaaagagagtgttgctagc 12456554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 31691637 - 31691692
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcc 411  Q
    |||||| ||||||||| ||| ||||||| || ||||| ||||||||||||||||||    
T  31691637 caataaaagagtgagtgttaaagagagttttcaaaagtgagtgttgctagcattcc 31691692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 35689526 - 35689573
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    ||||||||||||| |||||||||||||||||||| ||| |||| ||||    
T  35689526 tttttattggatgaaatcaatgtatgtcccaccactttatgtgagttc 35689573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 45246534 - 45246613
Alignment:
Q  328 caaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||| |  |||| ||||||| ||||||||||| | ||||  |||||||| || |||||||||||||| |||||    
T  45246534 caaagtgtagatctgcaatgatttaaatcaataagagagggggtataggagagagtattcaaaagagagtgttgatagca 45246613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 363 - 413
Target Start/End: Original strand, 1977306 - 1977356
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||  ||||||||||||| ||||| |||| |||||||||||||||    
T  1977306 agagtgagtgctagagagagtgttaaaaagtgagtattgctagcattcctc 1977356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 363 - 413
Target Start/End: Complemental strand, 8914818 - 8914768
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||| |||||||||| | | ||||| ||||||||||||||||||||    
T  8914818 agagtgagtgttagagagagcgctcaaaagtgagtgttgctagcattcctc 8914768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 348 - 414
Target Start/End: Original strand, 24683692 - 24683758
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    |||||| ||||| ||| ||||||| || |||| |||||| ||||||||||||  |||||||||||||    
T  24683692 atttaagccaatcagaaagtgagtgttggagatagtgttgaaaagagagtgtccctagcattcctca 24683758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 32072152 - 32072098
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| |||||||||  ||||||||||||| ||||| || |||||||||||||    
T  32072152 ccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 32072098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 333 - 415
Target Start/End: Original strand, 34952548 - 34952630
Alignment:
Q  333 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||| |||| ||||||||||| |  | | | |||||||||||||||||| |||| | |||||||||| |||| |||||    
T  34952548 tgtagacccgcaatgatttaaaccaagagaaaaataagtattagagagagtgttcaaaaaatagtgttgctaacattactcat 34952630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 354 - 415
Target Start/End: Original strand, 39023506 - 39023565
Alignment:
Q  354 accaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||||||||| ||||||||  |||||||||| |||| | ||||||||||||||| |||||    
T  39023506 accaataagagaatgagtatt--agagagtgttaaaaaaatagtgttgctagcattactcat 39023565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 330
Target Start/End: Original strand, 10868037 - 10868086
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa 330  Q
    ||||||||||||| | |||||||||||  ||||||||||||||| |||||    
T  10868037 tttttattggatgaactcaatgtatgtttcaccattttgtgtggattcaa 10868086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 327
Target Start/End: Original strand, 17716898 - 17716943
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt 327  Q
    |||||||||||| ||||||| |||||||||| ||||| ||||||||    
T  17716898 ttttattggatgaaatcaatatatgtcccactattttatgtgggtt 17716943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 292 - 383
Target Start/End: Complemental strand, 31895412 - 31895324
Alignment:
Q  292 tggaatcaatgtatgtcccaccattttgtgtgggttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagt 383  Q
    ||||||| ||| |||| |||| ||||||||||||||   |||||| || |  ||| |||||||||||||| | | |||||||||||||||||    
T  31895412 tggaatccatgcatgttccactattttgtgtgggtt---agtgtaaactcgtaatgatttaaaccaataaaataatgagtattagagagagt 31895324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 5e-34; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 12989242 - 12989370
Alignment:
Q  286 attggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattagag 378  Q
    |||||||| |||||||||||||||||||| ||||| ||| ||| |       |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12989242 attggatgaaatcaatgtatgtcccaccactttgtatggattctatttccgaagtgtagacccacaatgatttaaaccaataagagagtgagtattagag 12989341  T
Q  379 agagtgtttaaaagagagtgttgctagca 407  Q
    |||||||| ||||||||||||||||||||    
T  12989342 agagtgttcaaaagagagtgttgctagca 12989370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 286 - 413
Target Start/End: Original strand, 44274285 - 44274419
Alignment:
Q  286 attggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtattagag 378  Q
    |||||||  |||||||||||||||||||| ||||||||||||||       ||||||||| ||||||| |||||||||||||| ||||||||| ||||||    
T  44274285 attggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaaaccaataacagagtgagtgttagag 44274384  T
Q  379 agagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||| | ||||||||||||||||| |||||||||||    
T  44274385 agaatatttaaaagagagtgttgttagcattcctc 44274419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 282 - 408
Target Start/End: Original strand, 9470128 - 9470260
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||||||       ||||||||||||||||| |||||||||||||||||||||| ||||    
T  9470128 ttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtgaatatt 9470227  T
Q  375 agagagagtgtttaaaagagagtgttgctagcat 408  Q
    |||||| || || | |||||||||||||||||||    
T  9470228 agagagggt-ttcagaagagagtgttgctagcat 9470260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 281 - 407
Target Start/End: Original strand, 38464209 - 38464342
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||| ||| |||||||||||||| || || |||| |||||||||       ||||||||||||||||| |||||||||||||||||||| |||||    
T  38464209 tttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtaagtat 38464308  T
Q  374 tagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||||| |||||||||| |||||||||    
T  38464309 tagagagagtgttcaaaagagagtattgctagca 38464342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 282 - 418
Target Start/End: Complemental strand, 26767894 - 26767751
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||| |||||| |||||||||||||||||||| |||||| ||||||||       | ||||||| |||||| |||||||||||||| ||||||||||||    
T  26767894 ttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaattttcaaattgtagactcacaatgatttaaaccaataaaagagtgagtatt 26767795  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctcatgtg 418  Q
    ||| |||||||| |||||| ||||||||||||||| ||| ||||    
T  26767794 agatagagtgttcaaaagaaagtgttgctagcattactcttgtg 26767751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 45554614 - 45554732
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagaga 381  Q
    |||||||||||| |||||||||||||||||||| ||||      ||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  45554614 ttttattggatgaaatcaatgtatgtcccaccactttgcaatt-ttccaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagaga 45554712  T
Q  382 gtgtttaaaagagagtgttg 401  Q
     |||| ||||||||||||||    
T  45554713 atgttcaaaagagagtgttg 45554732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 6980253 - 6980119
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||| |||||| | |||| |||||||| ||||||       ||| |||||||||||| |||| ||| ||||||||||||||||||    
T  6980253 ttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaaagtatagacccacaatgatttcaactaataagagagtgagtatt 6980154  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||| |||||| ||||||||||||||| ||||||    
T  6980153 agagaaagtgttcaaaagagagtgttgcaagcatt 6980119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 299 - 413
Target Start/End: Original strand, 10981582 - 10981701
Alignment:
Q  299 aatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaa 391  Q
    |||||||||||||||| |||||||||||||       || ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    |    
T  10981582 aatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataagagagtgagtattagagggagtgtt--cta 10981679  T
Q  392 gagagtgttgctagcattcctc 413  Q
    |||||||||||||||| |||||    
T  10981680 gagagtgttgctagcactcctc 10981701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 326 - 407
Target Start/End: Complemental strand, 25238359 - 25238278
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||||| ||||||| |||||||||||||| | |||||||  |||||| ||||||||||||||||||||| |||||    
T  25238359 ttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgctagagaaagtgtttaaaagagagtgttgttagca 25238278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 326 - 405
Target Start/End: Original strand, 11539523 - 11539603
Alignment:
Q  326 ttcaaagtgtagacccacaata-atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctag 405  Q
    ||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  11539523 ttcaaagtgtagatccagaattgatttaaaccaataagagagtgagtattagagagagtgtgtaaaagagaatgttcctag 11539603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 19193574 - 19193494
Alignment:
Q  336 agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    |||||||| || |||||||| ||| ||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  19193574 agacccaccatgatttaaactaattagaaagtgagtgttggagagagtgttgaaaagagagtgttgctagcattcctcatg 19193494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 326 - 405
Target Start/End: Complemental strand, 4552922 - 4552843
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctag 405  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||| ||| | | |||| ||||| ||||||||||||    
T  4552922 ttcaatgtgtagacccacaatgatttaaaccaataagagagtgagtatcagaaaaaatgttcaaaagtgagtgttgctag 4552843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 14489618 - 14489539
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcat 408  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||| | | || |||||||||| ||||||||||    
T  14489618 aaagtgtagatccacaataatttaaaccaataaaagaatgagtattagagaaaattttcaaaagagagtcttgctagcat 14489539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 326 - 404
Target Start/End: Complemental strand, 30718409 - 30718331
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgcta 404  Q
    |||||||||||||| |||||| |||||||||||||| | ||||| ||||||||||||||| ||||||||| ||| ||||    
T  30718409 ttcaaagtgtagactcacaatgatttaaaccaataaaaaagtgaatattagagagagtgtctaaaagagaatgtggcta 30718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 35316476 - 35316400
Alignment:
Q  333 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||| ||||||| |||||||||||||||||| | | |||||| | ||||||||||||| ||||||||    
T  35316476 tgtagacccacaatgatttaaatcaataagagagtgagtatcataaagagtgctcaaaagagagtgttactagcatt 35316400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 32856217 - 32856134
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||| ||| | | |||||||||||||||||| ||||||||||| || ||||| |||| |||||||||||| ||||    
T  32856217 ttcaaagtgtagatccatagtgatttaaaccaataagagattgagtattagaaagggtgttcaaaatagagtgttgctaacatt 32856134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 36471920 - 36471837
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| |||| || |||||| |||||||||||||| ||||||||||||||||||||| || ||||  |||| |||||||||||    
T  36471920 ttcaaaatgtaaactcacaatgatttaaaccaataaaagagtgagtattagagagagtcttaaaaaaggagttttgctagcatt 36471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 281 - 417
Target Start/End: Original strand, 24497238 - 24497379
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| ||  ||||||||| ||| |||||||||||| ||       ||||||||||||| | | | |||||||| |||| ||||||||||||    
T  24497238 tttttattggatgaaactaatgtatgttccatcattttgtgtggattttattttcaaagtgtagaccaagagtgatttaaactaataggagagtgagtat 24497337  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcatgt 417  Q
    |  ||||||||||||| ||||||||||| ||||| | |||||||    
T  24497338 t--agagagtgtttaagagagagtgttgttagcactactcatgt 24497379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 41546152 - 41546212
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||||||| | || ||||||||||| ||||||||||| ||||||||||||||||    
T  41546152 ccaataagagagtgaatgtttgagagagtgttgaaaagagagtgatgctagcattcctcat 41546212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 336 - 407
Target Start/End: Original strand, 30706378 - 30706449
Alignment:
Q  336 agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||  ||||||||||||| || | ||||||| || ||||||||||| ||||||||||||||||||||    
T  30706378 agacccaccttaatttaaaccaacaataaagtgagtgtttgagagagtgttgaaaagagagtgttgctagca 30706449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 6420526 - 6420456
Alignment:
Q  336 agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagc 406  Q
    |||||||| || |||||| ||||||||| |||||||  | ||||||||||| |||||||||||||||||||    
T  6420526 agacccaccatgatttaagccaataagaaagtgagtggtggagagagtgttgaaaagagagtgttgctagc 6420456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 414
Target Start/End: Complemental strand, 15508968 - 15508910
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    |||||| ||||||||| ||||| |||||||| ||||||||||||||||| |||||||||    
T  15508968 caataaaagagtgagtgttagaaagagtgttcaaaagagagtgttgctaacattcctca 15508910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 396
Target Start/End: Original strand, 15884527 - 15884597
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagag 396  Q
    |||||| |||||||||||||| |||||||||||||||| | |||||||||||||  ||| | |||||||||    
T  15884527 ttcaaaatgtagacccacaattatttaaaccaataagataatgagtattagagattgtggtcaaaagagag 15884597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 410
Target Start/End: Complemental strand, 28898170 - 28898034
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtaga-cccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||| || |||||||||||||||||||| ||| ||||||||       ||||||||||| || ||| | |||| | ||||||| |||||||||      
T  28898170 ttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaagtgtagatcctacattgatttcatccaataaaagagtgagtgc 28898071  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    || |||||||  | |||||||||||||||||||||||    
T  28898070 taaagagagtactcaaaagagagtgttgctagcattc 28898034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 406
Target Start/End: Complemental strand, 34142273 - 34142141
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||  ||||||||| ||| | |||||||||||||||       ||||||||  ||||||  ||||||||||||||||||||| |||    
T  34142273 tttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagtgtagagtcacaatggtttaaaccaataagagagtgaatat 34142174  T
Q  374 tagagagagtgtttaaaagagagtgttgctagc 406  Q
    || ||| | | ||  ||||||||||||||||||    
T  34142173 taaagaaaatattctaaagagagtgttgctagc 34142141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 19639191 - 19639280
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||  | || |||||| | ||||| ||||||| |||||    
T  19639191 ttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattatagaggctattcaaaagaaaatgttgttagcattactcat 19639280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 19837784 - 19837873
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||  | || |||||| | ||||| ||||||| |||||    
T  19837784 ttcaaagtgcagacctacaatgatttaaaccaataagagagtgaatattatagaggctattcaaaagaaaatgttgttagcattactcat 19837873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 355 - 416
Target Start/End: Complemental strand, 45554622 - 45554561
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcatg 416  Q
    ||||||| |||||||||  ||||||||||||| ||||| ||||||||||||||||| |||||    
T  45554622 ccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattcttcatg 45554561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 17460974 - 17461038
Alignment:
Q  336 agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgtt 400  Q
    |||| ||||||||||||||  ||||||||||||| ||||||||||||| ||||||| ||| ||||    
T  17460974 agacacacaataatttaaattaataagagagtgaatattagagagagtatttaaaaaagaatgtt 17461038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 18511334 - 18511394
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||||  ||| ||||||||| ||||| ||||||||||||||||||||||    
T  18511334 ccaataaaagagtgagtgatagtgagagtgttaaaaagtgagtgttgctagcattcctcat 18511394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 28898162 - 28898222
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||||  ||||||||||| | |||| |||||||||||||||||||||||    
T  28898162 ccaataaaagagtgagtgctagagagagtgctcaaaaaagagtgttgctagcattcctcat 28898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 415
Target Start/End: Complemental strand, 37228553 - 37228493
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||||  ||||||||||| | |||||||||||||||||||||| |||||    
T  37228553 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatttctcat 37228493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 340 - 415
Target Start/End: Complemental strand, 472231 - 472156
Alignment:
Q  340 ccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||| | |||||| | |||| ||| |||| |||||    
T  472231 ccacaatgatttaaaccaataagagagcgagtattaaagagagtgctcaaaagaaattgtttctaacattactcat 472156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 410
Target Start/End: Complemental strand, 42182944 - 42182889
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    ||||||| |||||||||  ||||||||||| | |||||||||||||||||||||||    
T  42182944 ccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattc 42182889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 42182936 - 42183077
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagaccc-acaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||| || |||||||||||||||||||| ||| |||||||||       |||||||||  || ||| | |||| | ||||||| ||||| |||      
T  42182936 ttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagttagtgc 42183035  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
      ||||||||||| ||||||||||||| ||||||||||||||    
T  42183036 cggagagagtgttcaaaagagagtgttactagcattcctcat 42183077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 19953495 - 19953577
Alignment:
Q  328 caaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||| |||| ||| || |||||| ||||||| | |||||||||| |||| | |||| ||||||||||||||||||||||    
T  19953495 caaagtgtgagactcactatgatttaatccaataaaaaagtgagtattggagaaaatgttaaaaagagagtgttgctagcatt 19953577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 33678192 - 33678138
Alignment:
Q  332 gtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    |||||||| ||||||||||||||||||||| | ||||| |||||||||| |||||    
T  33678192 gtgtagactcacaataatttaaaccaataaaaaagtgaatattagagagtgtgtt 33678138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Original strand, 37398940 - 37398994
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    |||||| ||| |||||||||||||||||| |||||| ||||||||| ||||||||    
T  37398940 caataaaagattgagtattagagagagtgcttaaaatagagtgttgttagcattc 37398994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 356 - 413
Target Start/End: Complemental strand, 1110252 - 1110195
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| ||||||||| ||||||||| || |  |||||||||||||||||||||||||    
T  1110252 caataaaagagtgagtgttagagagaatgctcgaaagagagtgttgctagcattcctc 1110195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 7919352 - 7919311
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagt 367  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  7919352 ttcaaagtgtagatccacaatgatttaaaccaataagagagt 7919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 413
Target Start/End: Original strand, 15508961 - 15509100
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtaga-cccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||  || |||||||||||||||||||||||| ||||||||       ||||||||||| || ||| | |||| | ||||| | ||||| |||      
T  15508961 ttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccatttccaaagtgtagatcctacattgatttcacccaattaaagagtaagtga 15509060  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    || |||||||| | ||||||||||||||||| ||||||||    
T  15509061 tatagagagtgctaaaaagagagtgttgctaacattcctc 15509100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 31494261 - 31494211
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||||||||| ||||||||  |||| ||||||||||||||||||||    
T  31494261 ccaataagagagtgagtgttagagag--tgttgaaaagagagtgttgctagca 31494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 409
Target Start/End: Original strand, 43414401 - 43414535
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggt-------tcaaagtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| ||||||||||||| | ||||||||| ||  ||       ||| ||| |||| ||||||| ||||||||||| ||||| ||||||||    
T  43414401 tttttattggatgaaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatccacaatgatttaaaccaagaagagggtgagtat 43414500  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||| ||| || |  |||||||||||||| |||||||    
T  43414501 tagtgagtgt-tcaaaaagagagtgttgatagcatt 43414535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 330
Target Start/End: Complemental strand, 18511342 - 18511294
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa 330  Q
    |||||||||||  |||||||||||||||||| ||||| |||||||||||    
T  18511342 ttttattggataaaatcaatgtatgtcccactattttatgtgggttcaa 18511294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 19190694 - 19190630
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    |||||| | ||||||||| | ||||| |||||||||||| ||||||||||||||  |||||||||    
T  19190694 taatttcatccaataagaaaatgagtgttagagagagtgcttaaaagagagtgtctctagcattc 19190630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 20459031 - 20459083
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||| |||||||  | ||||||||||| ||||||||||||||||||||    
T  20459031 ccaataagaaagtgagtggtggagagagtgttgaaaagagagtgttgctagca 20459083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 27968982 - 27968919
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| | ||||||| |||||||||  ||||||||||  | ||||||||||||||||||||||    
T  27968982 taatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 27968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 409
Target Start/End: Original strand, 28091605 - 28091668
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| | ||||||| |||||||||  ||||||||||  | ||||||||||||||||||||||    
T  28091605 taatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28091668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 409
Target Start/End: Original strand, 28101837 - 28101900
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| | ||||||| |||||||||  ||||||||||  | ||||||||||||||||||||||    
T  28101837 taatttcacccaataaaagagtgagtgctagagagagtactcaaaagagagtgttgctagcatt 28101900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 42579708 - 42579661
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgct 403  Q
    |||| ||||||||||| ||||| ||||||||||||||| |||||||||    
T  42579708 caattagagagtgagttttagaaagagtgtttaaaagaaagtgttgct 42579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 4964725 - 4964671
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| |||||||||  |||||||||| || |||||||||| |||||||||||    
T  4964725 ccaataaaagagtgagtgctagagagagtattcaaaagagagtattgctagcatt 4964671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 5140023 - 5139969
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| |||||||||| |||||||||||| |  |||||||||||| ||||||||    
T  5140023 ccaataggagagtgagtgttagagagagtgctagaaagagagtgttcctagcatt 5139969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 6315786 - 6315844
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| ||||||| ||||| | |||||| | |||||||||||||| |||||||||||    
T  6315786 ccaataaaagagtgaatattaaaaagagtgctcaaaagagagtgttgttagcattcctc 6315844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 6980245 - 6980299
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||| |||||||||  ||||||||||||| ||||| || |||||||||||||    
T  6980245 ccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatt 6980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 377 - 415
Target Start/End: Complemental strand, 12989224 - 12989186
Alignment:
Q  377 agagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  12989224 agagagtgttgaaaagtgagtgttgctagcattcctcat 12989186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 36471963 - 36472021
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||||| ||||| | |||||||||||| ||||| ||||||| ||| ||||||||    
T  36471963 ccaataagagattgagtgtcagagagagtgttgaaaagtgagtgttactatcattcctc 36472021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 37719889 - 37719831
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||||||  |||| |||||| | |||||||| |||||||||||||||||    
T  37719889 ccaataaaagagtgagtgctagaaagagtgctcaaaagagaatgttgctagcattcctc 37719831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 41805901 - 41805959
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| ||||||||| ||| ||| |||||  |||| |||||||||||||||||||||    
T  41805901 ccaataaaagagtgagtgttaaagaaagtgtccaaaatagagtgttgctagcattcctc 41805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 43400188 - 43400146
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagt 397  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||    
T  43400188 ccaataagaaagtgagtgttagagagagtgttgaaaagagagt 43400146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 80444 - 80403
Alignment:
Q  342 acaataatttaaaccaataagagagtgagtattagagagagt 383  Q
    |||||||||||||||||||| | | |||||||||||||||||    
T  80444 acaataatttaaaccaataaaaaaatgagtattagagagagt 80403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 2122915 - 2122972
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctag 405  Q
    ||||||| |||||||||||||||||  ||||| | |||| |||| |||||||||||||    
T  2122915 atttaaatcaataagagagtgagtaccagagaaaatgttcaaaaaagagtgttgctag 2122972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 12098949 - 12098867
Alignment:
Q  326 ttcaaagtgtagacccacaa-taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||| || ||||| | |||||||| ||||||||||||||||||  | ||||||||  ||| ||| |||||||||||||    
T  12098949 ttcaaagtgtaaactcacaaatgatttaaactaataagagagtgagtatt--aaagagtgttccaaatagaatgttgctagcatt 12098867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 377 - 410
Target Start/End: Original strand, 19427392 - 19427425
Alignment:
Q  377 agagagtgtttaaaagagagtgttgctagcattc 410  Q
    |||||||||| |||||||||||||||||||||||    
T  19427392 agagagtgttaaaaagagagtgttgctagcattc 19427425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 356 - 413
Target Start/End: Original strand, 23463952 - 23464009
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||| ||||| | || |||||||| || |||||||| |||||||||||||||||    
T  23463952 caataagatagtgaatgtttgagagagtattaaaaagagaatgttgctagcattcctc 23464009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 374 - 415
Target Start/End: Original strand, 26767905 - 26767946
Alignment:
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||||| |||| ||||| ||||||||||||||||||||||    
T  26767905 tagagagaatgttgaaaagtgagtgttgctagcattcctcat 26767946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 379
Target Start/End: Complemental strand, 27494533 - 27494480
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagaga 379  Q
    |||||||  ||||||| |||| ||||||| |||||| |||||||||||||||||    
T  27494533 ttcaaagcatagacccgcaatgatttaaatcaataaaagagtgagtattagaga 27494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 43400254 - 43400315
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||| | | ||||| ||   ||||||||| ||||||||||||||||||||||    
T  43400254 atttaaaccaataataaaatgagtgtttaggagagtgttgaaaagagagtgttgctagcatt 43400315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 44152352 - 44152412
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||| | ||||||| ||||||||| |||| || | |||||||||||||||||    
T  44152352 atttaaaccaataaaa-agtgagtgttagagagaatgttgaacaaagagtgttgctagcatt 44152412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 5e-31; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 8899112 - 8899201
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  8899112 ttcaaagtgtaggtccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagattgttgctagcattactcat 8899201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 295 - 413
Target Start/End: Complemental strand, 30679031 - 30678906
Alignment:
Q  295 aatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttt 387  Q
    |||||||||||||||||||| |||||||||||||||       ||||||||| |||||| |||||| ||||||||||||||||| |||||||||||| |     
T  30679031 aatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagtgagtgttagagagagtgctc 30678932  T
Q  388 aaaagagagtgttgctagcattcctc 413  Q
    |||| |||||||||||||||||||||    
T  30678931 aaaaaagagtgttgctagcattcctc 30678906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 11987724 - 11987813
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||||||||||||| |||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||| |||||    
T  11987724 ttcaaagtgtagacccacaatgatttaaaccattaagagagtggatattagaaagagtgtttaaaagagagtgttgctagcattactcat 11987813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 284 - 408
Target Start/End: Complemental strand, 26980393 - 26980262
Alignment:
Q  284 ttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattag 376  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||       | | || | ||||||| ||||||| ||||||||||||||||||||     
T  26980393 ttattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaattttcaaaatatacatccacaatgatttaaatcaataagagagtgagtattat 26980294  T
Q  377 agagagtgtttaaaagagagtgttgctagcat 408  Q
    |||||||||| |||||||||||||||||||||    
T  26980293 agagagtgttgaaaagagagtgttgctagcat 26980262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 41958131 - 41958241
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||       ||||||||||||||| | ||||||||||||||||||||||||||||    
T  41958131 tttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaattttcaaagtgtagacccacagtgatttaaaccaataagagagtgagtatta 41958230  T
Q  376 gagagagtgtt 386  Q
    || ||||||||    
T  41958231 gaaagagtgtt 41958241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 39974326 - 39974199
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaaa-gtgtagacccacaataatttaaaccaataagagagtgagtattagagaga 381  Q
    |||||| |||| |||||||| |||| |||||||||||| |||||||||| ||| |||   ||||| |||||||||||||||||||||||||||||| |||    
T  39974326 tttattagatgaaatcaatggatgttccaccattttgtatgggttcaaaagtgcagatttacaatgatttaaaccaataagagagtgagtattagaaaga 39974227  T
Q  382 gtgtttaaaagagagtgttgctagcatt 409  Q
     |||| |||||||||||||| |||||||    
T  39974226 atgttcaaaagagagtgttgttagcatt 39974199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 6133757 - 6133624
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||||||       ||| || ||||||||| ||| |||||||||||||||||||||||    
T  6133757 ttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaattttcaaagtctacacccacaatgatt-aaaccaataagagagtgagtatt 6133659  T
Q  375 agagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||  |||| ||||||||||||||||| ||||    
T  6133658 agagaggatgttcaaaagagagtgttgctaacatt 6133624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 33193098 - 33193208
Alignment:
Q  283 tttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||       ||||||||||||||||| |||||||||||||||||| |||||||||    
T  33193098 tttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaatgagtatta 33193197  T
Q  376 gagagagtgtt 386  Q
    |||| ||||||    
T  33193198 gagaaagtgtt 33193208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 282 - 406
Target Start/End: Original strand, 2225271 - 2225402
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||       ||||||||||||| ||| | |||||||||||||||| |||||||||     
T  2225271 ttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggtttacaaagtgtagaccgacagtgatttaaaccaataagaaagtgagtatc 2225370  T
Q  375 agagagagtgtttaaaagagagtgttgctagc 406  Q
    | | || ||||| ||||||||||||| |||||    
T  2225371 acaaagcgtgttcaaaagagagtgttactagc 2225402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 281 - 405
Target Start/End: Complemental strand, 8741357 - 8741226
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| |||||||||||||| ||| | |||||||||||||||       ||| || || |||||| |||||||| |||||||||||||||||    
T  8741357 tttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaattttcaaagtataaacacacaatgatttaaactaataagagagtgagtat 8741258  T
Q  374 tagagagagtgtttaaaagagagtgttgctag 405  Q
    |||||| | |||| ||||||||||||||||||    
T  8741257 tagagaaattgttcaaaagagagtgttgctag 8741226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 281 - 415
Target Start/End: Complemental strand, 10659902 - 10659762
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||| ||||| |||||||| |||||| |||| ||||||| |||||||       ||||||||||||| || ||||||||||||||||||||| ||||    
T  10659902 tttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgtagacccacgatgatttaaaccaataagagagtg-gtat 10659804  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||| |||||| |||||| | ||||||||||||| |||||    
T  10659803 tagagaaagtgttcaaaagaaaatgttgctagcattactcat 10659762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 28218181 - 28218045
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||| ||||| ||||||||| |||||       |||||||| ||||| |||||||||  ||||||| ||||||||||    
T  28218181 ttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaagtgtagaaccacagtaatttaaattaataagatagtgagtatt 28218082  T
Q  375 aga--gagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||  | ||||||| ||||||||||||||||||||||    
T  28218081 agagcgggagtgttcaaaagagagtgttgctagcatt 28218045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 282 - 407
Target Start/End: Complemental strand, 19101734 - 19101602
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| ||| || | ||||       |||||||||| |  |||| |||||||||||||||| ||||||||||    
T  19101734 ttttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgtagatctgcaatgatttaaaccaataagaaagtgagtatt 19101635  T
Q  375 agagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||||||| ||||||||||  ||||||||    
T  19101634 agagagagtgttcaaaagagagtagtgctagca 19101602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 282 - 413
Target Start/End: Original strand, 931421 - 931559
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||| |||||| |||||||||||||| |||||| |||||||||||       | | || ||||||||| |||||||||||||| ||||||| ||||    
T  931421 ttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaattttcaaaatatacacccacaatgatttaaaccaataaaagagtgaatatt 931520  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||| | |||||| |||  |||||||||||||||||||||    
T  931521 agaaaaagtgttaaaagaagagtgttgctagcattcctc 931559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 334 - 413
Target Start/End: Complemental strand, 16948603 - 16948524
Alignment:
Q  334 gtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||| | |||| || |||||||||||||||||||||||    
T  16948603 gtagatccacaatgatttaaatcaataagagagtgagtattagagaaaatgttcaacagagagtgttgctagcattcctc 16948524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 282 - 404
Target Start/End: Complemental strand, 32211917 - 32211788
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaaa-------gtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||| |||| ||||||||||||||| || | |||||||| ||||||        ||||||||||||||| ||||||||||||||||||||||  |||    
T  32211917 ttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgatttaaaccaataagagagtgatcatt 32211818  T
Q  375 agagagagtgtttaaaagagagtgttgcta 404  Q
    | ||| |||||| |||||||||||||||||    
T  32211817 aaagaaagtgttgaaaagagagtgttgcta 32211788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 41948228 - 41948145
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||| | ||||||| ||||||| |||||||||||||||| |||||||||||||| |||||||| | |||||||||||    
T  41948228 ttcaaagtgtaaatccacaatgatttaaatcaataagagagtgagtgttagagagagtgttcaaaagagaatattgctagcatt 41948145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 282 - 413
Target Start/End: Original strand, 25543387 - 25543524
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt------caaagtgtagacccacaataatttaaaccaataagagagtgagtatta 375  Q
    ||||||| |||| ||||||| |||||||||||| ||||||| |||       ||| ||| || | |||||| |||||||||||||||| |||||||||||    
T  25543387 ttttatttgatgaaatcaatatatgtcccaccactttgtgtaggtatattcccaatgtgcagcctcacaatgatttaaaccaataagatagtgagtatta 25543486  T
Q  376 gagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||||| ||||||||||||| ||| || |||||    
T  25543487 gagagagtgttcaaaagagagtgttactaacactcctc 25543524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 282 - 417
Target Start/End: Original strand, 15928602 - 15928742
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    ||||||| ||||||||  ||||||||| |||||||||||||| ||||       || ||||||||  ||| | |||||||||||||| ||||||||||||    
T  15928602 ttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgatttaaaccaataaaagagtgagtatt 15928701  T
Q  375 agagagagtgtttaaaagagagtgttgctagcattcctcatgt 417  Q
      |||||||||| |||||||||||||| ||||| | |||||||    
T  15928702 --agagagtgttcaaaagagagtgttggtagcactactcatgt 15928742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 29673522 - 29673633
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttca-------aagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||  ||||||| |||||||||||||||||||| | ||||       ||||||||| | ||||| |||||||||||||| | ||||||||||    
T  29673522 ttttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatttaaaccaataaaaaagtgagtatt 29673621  T
Q  375 agagagagtgtt 386  Q
    ||||||||||||    
T  29673622 agagagagtgtt 29673633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 281 - 417
Target Start/End: Original strand, 28109914 - 28110057
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc------aaagtgtagaccc-acaataatttaaaccaataagagagtgagtat 373  Q
    |||||||||| || |||||||| |||| |||||||||| |||||||||      |||||||||| || | ||| |||| | ||||||| | |||||||||    
T  28109914 tttttattgggtgaaatcaatgcatgttccaccattttatgtgggttccatttcaaagtgtagatcctagaatgatttcatccaataaaaaagtgagtat 28110013  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcatgt 417  Q
    |||||| |||  ||||||||||||||| ||| ||||||||||||    
T  28110014 tagagaaagtacttaaaagagagtgttcctaacattcctcatgt 28110057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 396
Target Start/End: Original strand, 15468247 - 15468388
Alignment:
Q  263 aatgctagcaacactccct-ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaa 354  Q
    |||| ||||||||||| || |||||||  || ||||||||||||||| ||  | |||||||||||||||       ||||||||||||||||||||||||    
T  15468247 aatgttagcaacactcactcttttattaaatagaatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaa 15468346  T
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagag 396  Q
      ||||| ||||| |||||| |||| |||||| |||||||||    
T  15468347 ttaataaaagagtaagtatttgagatagtgttcaaaagagag 15468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 12767407 - 12767329
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||| || ||| |||||||||||||| |||||||||||||||||| || || |||||||| | |||||||||    
T  12767407 aaagtgtagactcataatgatttaaaccaataaaagagtgagtattagagagggttttcaaaagagatttttgctagca 12767329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 26980387 - 26980445
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  26980387 ccaataatagagtgagtattagagagagtgttgaaaagtgagtgttgttagcattcctc 26980445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 326 - 408
Target Start/End: Original strand, 51732375 - 51732456
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcat 408  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||||||| |  ||| |||| | ||||||||||||||    
T  51732375 ttcaaagtataaacccacaataatttaaaccaataaaagagtgagtattagagaaaacgttcaaaa-aaagtgttgctagcat 51732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 15523257 - 15523385
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| ||| || | ||||       |||||||||| || |||| |||||||||||||||    | ||||||    
T  15523257 ttttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaataag----ttagtatt 15523352  T
Q  375 agagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||||||| ||||||||||  ||||||||    
T  15523353 agagagagtgttcaaaagagagtagtgctagca 15523385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 15531251 - 15531379
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| ||| || | ||||       |||||||||| || |||| |||||||||||||||    | ||||||    
T  15531251 ttttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaataag----ttagtatt 15531346  T
Q  375 agagagagtgtttaaaagagagtgttgctagca 407  Q
    |||||||||||| ||||||||||  ||||||||    
T  15531347 agagagagtgttcaaaagagagtagtgctagca 15531379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 282 - 407
Target Start/End: Original strand, 22540415 - 22540543
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagagagtgagtatt 374  Q
    |||||||||||| |||||||||||||||||||| ||| || | ||||       |||||||||| || |||| |||||||||||||||    | ||||||    
T  22540415 ttttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataag----ttagtatt 22540510  T
Q  375 agagagagtgtttaaaagagagtgttgctagca 407  Q
    | |||||||||| ||||||||||| ||||||||    
T  22540511 aaagagagtgttcaaaagagagtggtgctagca 22540543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 342 - 415
Target Start/End: Original strand, 32848695 - 32848768
Alignment:
Q  342 acaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||| |||| | ||||||| |||||||||  ||||||||||||| |||||||||||||| |||||||||||||    
T  32848695 acaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttgttagcattcctcat 32848768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 326 - 411
Target Start/End: Original strand, 33114069 - 33114154
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcc 411  Q
    ||||||||||||| ||| ||| |||||||||||||| | |||||||  || |||||||||||||||| || | |||||||||||||    
T  33114069 ttcaaagtgtagatccagaatgatttaaaccaataaaaaagtgagtcctatagagagtgtttaaaagtgaatcttgctagcattcc 33114154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 357 - 413
Target Start/End: Complemental strand, 25543393 - 25543337
Alignment:
Q  357 aataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||    
T  25543393 aataaaagagtaagtgttagagagagtgtttaaaagtgagtgttgctagcattcctc 25543337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 329 - 409
Target Start/End: Original strand, 27570326 - 27570406
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||| ||||||||| |||| ||| ||||||| ||||| | | |||||||||||| |||||||| |||||||||||||    
T  27570326 aaagtgtaaacccacaatgatttgaactaataagaaagtgaatttgagagagagtgttcaaaagagaatgttgctagcatt 27570406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 326 - 397
Target Start/End: Complemental strand, 37553031 - 37552962
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagt 397  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||  | |||||||| ||||||||||    
T  37553031 ttcaaagtgtagatccacaatgatttaaatcaataagagagtgagtatt--aaagagtgttcaaaagagagt 37552962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 11135786 - 11135927
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagaccc-acaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||| || |||||||||||||||||||| ||| |||||||||       |||||||||  || ||| | |||| | ||||||| |||||||||      
T  11135786 ttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtgagtgc 11135885  T
Q  374 tagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||  | ||||||||||||||||||||| ||||||    
T  11135886 tagagagagtcctcaaaagagagtgttgctagcatccctcat 11135927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 354 - 413
Target Start/End: Original strand, 11430567 - 11430626
Alignment:
Q  354 accaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||| |||||||||  ||||||||||| | ||||||||||||||||||||||||||    
T  11430567 accaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 11430626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 348 - 407
Target Start/End: Complemental strand, 21466680 - 21466621
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||| |||||||| ||||| |||||||||||||||| ||||||||||| ||||||||    
T  21466680 atttaaatcaataagaaagtgaatattagagagagtgttcaaaagagagtggtgctagca 21466621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 13388389 - 13388331
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| | ||||||| ||||||||||| || ||||||||||||||||||||||||||    
T  13388389 ccaataaaaaagtgagtgttagagagagtattcaaaagagagtgttgctagcattcctc 13388331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 13889287 - 13889329
Alignment:
Q  371 tattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  13889287 tattagagagagtgttcaaaagagagtgttgctagcattcctc 13889329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 361 - 407
Target Start/End: Original strand, 39019700 - 39019746
Alignment:
Q  361 agagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  39019700 agagagtgagtattagagaaagtgttcaaaagagagtgttgctagca 39019746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 356 - 413
Target Start/End: Complemental strand, 931428 - 931371
Alignment:
Q  356 caataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||| ||||||||||||||||| || ||| ||||| ||||||||||||||||||||    
T  931428 caataaaagagtgagtattagagatagagttgaaaagtgagtgttgctagcattcctc 931371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 338 - 407
Target Start/End: Complemental strand, 13114739 - 13114670
Alignment:
Q  338 acccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||| | |||||| ||||| ||| ||||||| |||||||||||||  ||||||||||||||||||||    
T  13114739 acccacattgatttaacccaatgagatagtgagtgttagagagagtgtccaaaagagagtgttgctagca 13114670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 35336965 - 35337018
Alignment:
Q  333 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    ||||||| |||||| ||||||||||||||||||  |||||||||||||||||||    
T  35336965 tgtagacacacaatgatttaaaccaataagagaacgagtattagagagagtgtt 35337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 409
Target Start/End: Complemental strand, 6325932 - 6325816
Alignment:
Q  295 aatcaatgtatgtcccaccattttgtgtggg------ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttta 388  Q
    ||||||||||||||||||||||||||||| |      ||||||||||| ||||||||| || |||||||| |||| | | | ||||    ||||| || |    
T  6325932 aatcaatgtatgtcccaccattttgtgtgagttctttttcaaagtgtaaacccacaatgatgtaaaccaacaagaaaataaatatt----agagtcttca 6325837  T
Q  389 aaagagagtgttgctagcatt 409  Q
    |||||||||||||||||||||    
T  6325836 aaagagagtgttgctagcatt 6325816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 415
Target Start/End: Complemental strand, 11135794 - 11135734
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| | |||||||  ||||||||||| | ||||||||||||||||||||||||||||    
T  11135794 ccaataaaatagtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctcat 11135734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 355 - 399
Target Start/End: Complemental strand, 28274841 - 28274797
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  28274841 ccaataagagagtgagtgttagagagagtgttgaaaagagagtgt 28274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 33059972 - 33059896
Alignment:
Q  329 aaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctag 405  Q
    |||||||| || ||||||  |||||||||||||||||||| ||| |||| | |||||| |||||||||| |||||||    
T  33059972 aaagtgtacactcacaatgttttaaaccaataagagagtgggtactagaaaaagtgttcaaaagagagtattgctag 33059896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 50424946 - 50424866
Alignment:
Q  328 caaagtgta-gacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||| |||||||| | |||||| ||||||| | ||||| | ||||||||||||  |||||||||||||||||||||    
T  50424946 caaagtgtatgacccacattgatttaacccaataaaaaagtgaatgttagagagagtgcctaaaagagagtgttgctagca 50424866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 18157159 - 18157214
Alignment:
Q  350 ttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctag 405  Q
    |||||||||||||  |||||||||| |||||| |||| ||||||||||||||||||    
T  18157159 ttaaaccaataaggaagtgagtatttgagagaatgttgaaaagagagtgttgctag 18157214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 407
Target Start/End: Original strand, 28941868 - 28942000
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtat 373  Q
    ||||||||||||| ||| | ||||||||||||||| || ||||||||| |       ||| | || ||||| | | ||||| |||||||||||||| | |    
T  28941868 tttttattggatgaaattattgtatgtcccaccatattatgtgggttccattttctaagtatggatccacatttacttaaatcaataagagagtgaatgt 28941967  T
Q  374 tagagagagtgtttaaaagagagtgttgctagca 407  Q
    |||| ||||||||||||| |||||||||||||||    
T  28941968 tagatagagtgtttaaaa-agagtgttgctagca 28942000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 405
Target Start/End: Complemental strand, 33114039 - 33113976
Alignment:
Q  342 acaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctag 405  Q
    ||||| |||||||| ||||||| ||||||||||| ||| ||| ||||||||||||| |||||||    
T  33114039 acaatgatttaaactaataagaaagtgagtattaaagaaagtatttaaaagagagtattgctag 33113976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 363 - 413
Target Start/End: Complemental strand, 44739165 - 44739115
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||||  ||||||||||||| ||||||||||||||||| ||||||||    
T  44739165 agagtgagtgctagagagagtgttcaaaagagagtgttgctaacattcctc 44739115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 45179328 - 45179270
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtg 384  Q
    ||||||||||| ||||||||||| |||||  ||||||| | ||||||||||||||||||    
T  45179328 ttcaaagtgtaaacccacaataacttaaattaataagaaaatgagtattagagagagtg 45179270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 413
Target Start/End: Complemental strand, 39019609 - 39019572
Alignment:
Q  376 gagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  39019609 gagagagtgttgaaaagagagtgttgctagcattcctc 39019572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 415
Target Start/End: Complemental strand, 11430496 - 11430436
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||| |||||||||  |||| |||||| | |||||||||||||| |||||||||||||    
T  11430496 ccaataaaagagtgagtgctagaaagagtgctcaaaagagagtgttgttagcattcctcat 11430436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 13114797 - 13114849
Alignment:
Q  357 aataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||| ||||||||| |||||||||||||  |||||||||||| |||||||||    
T  13114797 aataaaagagtgagtgttagagagagtgtccaaaagagagtgtcgctagcatt 13114849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 263 - 399
Target Start/End: Original strand, 15660920 - 15661063
Alignment:
Q  263 aatgctagcaacactccct-ttttattggatggaatcaatgtatgtcccaccattttgtgtgggtt-------caaagtgta-gacccacaataatttaa 353  Q
    |||||||||||||||| || |||||||||||  |||||||| ||||||||||| ||| || |||||       |||| |||| |||  ||| | ||||||    
T  15660920 aatgctagcaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgcgggttttatttccaaaatgtatgac--acattgatttaa 15661017  T
Q  354 accaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
     ||||||| ||||||||| |||||||||||||  ||||||||||||    
T  15661018 cccaataatagagtgagtgttagagagagtgtccaaaagagagtgt 15661063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 415
Target Start/End: Original strand, 29068206 - 29068266
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||| |||||||||| |||||||||||| |  |||||||||||| |||||||| |||||    
T  29068206 ccaataggagagtgagtgttagagagagtgctagaaagagagtgttcctagcatttctcat 29068266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 41095651 - 41095603
Alignment:
Q  365 agtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    |||||||  ||||||||||| | ||||||||||||||||||||||||||    
T  41095651 agtgagtgctagagagagtgctcaaaagagagtgttgctagcattcctc 41095603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 3872766 - 3872813
Alignment:
Q  363 agagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    |||||||||  ||||||||||||| ||||| |||||||||||||||||    
T  3872766 agagtgagtgctagagagagtgttgaaaagtgagtgttgctagcattc 3872813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 14094135 - 14094088
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    |||||||||| || |||||||||||||||||||| ||| |||||||||    
T  14094135 tttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttc 14094088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 407
Target Start/End: Complemental strand, 21970337 - 21970278
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||||||   ||||||||||   |||| |||||||||||||||||||||||||    
T  21970337 atttaaaccaataatgaagtgagtatttatgagaatgtttaaaagagagtgttgctagca 21970278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 410
Target Start/End: Complemental strand, 41918050 - 41917995
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattc 410  Q
    ||||||| |||||||||  ||||||| ||| | |||||||||||||||||||||||    
T  41918050 ccaataaaagagtgagtgctagagagggtgctcaaaagagagtgttgctagcattc 41917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 355 - 414
Target Start/End: Original strand, 43851160 - 43851219
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctca 414  Q
    |||||||  ||||||||| ||||||| | | ||||||||||||||||||| |||||||||    
T  43851160 ccaataaatgagtgagtactagagagtgcgcttaaaagagagtgttgctaacattcctca 43851219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 409
Target Start/End: Complemental strand, 50773172 - 50773109
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||| | ||||||| ||| |||||  ||||||||||||| |||||||||| |||||||||||    
T  50773172 taattttacccaataaaagaatgagtgctagagagagtgttcaaaagagagtattgctagcatt 50773109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 413
Target Start/End: Original strand, 6133749 - 6133807
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctc 413  Q
    ||||||| || ||||||  |||||||| |||| ||||| ||||||||||||||||||||    
T  6133749 ccaataaaagggtgagtgctagagagattgttgaaaagtgagtgttgctagcattcctc 6133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 11430488 - 11430534
Alignment:
Q  282 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc 328  Q
    ||||||||| || |||||||||||||||||||| ||| |||||||||    
T  11430488 ttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttc 11430534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 326 - 399
Target Start/End: Original strand, 18473747 - 18473821
Alignment:
Q  326 ttcaaagtgt-agacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgt 399  Q
    |||||||||| |||||||| || |||||| ||||| ||| ||||||| ||  |||||||||| ||||||||||||    
T  18473747 ttcaaagtgtgagacccaccatgatttaagccaattagaaagtgagtgttgaagagagtgttgaaaagagagtgt 18473821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 29673678 - 29673732
Alignment:
Q  332 gtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtt 386  Q
    ||||||| | ||||| |||||||||||||| | ||||| ||||||||||||||||    
T  29673678 gtgtagaactacaattatttaaaccaataaaaaagtgaatattagagagagtgtt 29673732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 41095734 - 41095788
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||  ||||||||  ||||||||||| | ||||||||||||||||||||||    
T  41095734 ccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 41095788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 4578702 - 4578752
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||| ||||||||| ||||||||  |||| ||||||||||||||||||||    
T  4578702 ccaataaaagagtgagtgttagagag--tgttgaaaagagagtgttgctagca 4578752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 346 - 415
Target Start/End: Complemental strand, 18157102 - 18157033
Alignment:
Q  346 taatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    |||||| | ||||||| | |||| || |||||||||||||| ||||||||||||  |||||||| |||||    
T  18157102 taatttcatccaataaaaaagtgggtgttagagagagtgttgaaaagagagtgtccctagcatttctcat 18157033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 400
Target Start/End: Complemental strand, 30787448 - 30787403
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgtt 400  Q
    |||||||||||||| || ||||| |||||||| |||||||||||||    
T  30787448 ccaataagagagtgtgtgttagaaagagtgttgaaaagagagtgtt 30787403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 39039480 - 39039537
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcct 412  Q
    ||||||| |||||||||  || | |||||||| ||||| |||||||||||||||||||    
T  39039480 ccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttgctagcattcct 39039537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 376 - 409
Target Start/End: Original strand, 43527275 - 43527308
Alignment:
Q  376 gagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||||||||||||||| |||||||||||||    
T  43527275 gagagagtgtttaaaagagaatgttgctagcatt 43527308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 359
Target Start/End: Original strand, 49730962 - 49730995
Alignment:
Q  326 ttcaaagtgtagacccacaataatttaaaccaat 359  Q
    ||||||||||||||||||||| ||||||||||||    
T  49730962 ttcaaagtgtagacccacaatgatttaaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 9710 - 9801
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagaga 365  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||       ||||||||||| ||||||||||||||| |||||||||    
T  9710 tttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagaga 9801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 11256 - 11347
Alignment:
Q  281 tttttattggatggaatcaatgtatgtcccaccattttgtgtgggttc-------aaagtgtagacccacaataatttaaaccaataagaga 365  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||       ||||||||||| ||||||||||||||| |||||||||    
T  11256 tttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagaga 11347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 204783 - 204707
Alignment:
Q  333 tgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    |||||||  ||||| || ||||||||||| |||||||||| |||||||| |||| |||| |||||||||||||||||    
T  204783 tgtagacttacaattatataaaccaataaaagagtgagtactagagagaatgttcaaaaaagagtgttgctagcatt 204707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 415
Target Start/End: Complemental strand, 121255 - 121194
Alignment:
Q  353 aaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcattcctcat 415  Q
    ||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||||| |||||    
T  121255 aaccaataagagagtgagtattagagaga-tttttcaaagagaatgttgctagcattactcat 121194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 8489 - 8413
Alignment:
Q  330 aagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagc 406  Q
    |||||||||| || ||| |||||||||||||| ||| | ||||||| ||||||| || |||||||||||||| ||||    
T  8489 aagtgtagactcataatgatttaaaccaataaaagaattagtattaaagagagtattcaaaagagagtgttgttagc 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 348 - 407
Target Start/End: Original strand, 296957 - 297016
Alignment:
Q  348 atttaaaccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagca 407  Q
    ||||||||||||||   ||||||| || ||||||||||| ||||||||||||||||||||    
T  296957 atttaaaccaataatgaagtgagtgtttgagagagtgttgaaaagagagtgttgctagca 297016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 296891 - 296837
Alignment:
Q  355 ccaataagagagtgagtattagagagagtgtttaaaagagagtgttgctagcatt 409  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||  ||||||||    
T  296891 ccaataagagagtgagtgttagagagagtgttgaaaagaaagtgtccctagcatt 296837  T

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Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 295 - 408
Target Start/End: Complemental strand, 26982 - 26862
Alignment:
Q  295 aatcaatgtatgtcccaccattttgtgtgggttcaa-------agtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttt 387  Q
    ||||||||||||| |||||| |||||||||||||||       || ||||||||| |||  ||||||||||||| ||||||  | ||||||| |||| |     
T  26982 aatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaagagtggatgttagagaaagtgctc 26883  T
Q  388 aaaagagagtgttgctagcat 408  Q
    ||||  |||||||||||||||    
T  26882 aaaaacgagtgttgctagcat 26862  T

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