View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5600_high_10 (Length: 272)
Name: NF5600_high_10
Description: NF5600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5600_high_10 |
 |  |
|
| [»] scaffold0001 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 10 - 257
Target Start/End: Original strand, 5163570 - 5163818
Alignment:
| Q |
10 |
taatactttttatctttttgaaattgaattagcaacaaagccaccttaaaaaatggaaagtaagaacaagttgtcaaatcttaaagcaattaaatcactt |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5163570 |
taatactttttatctttttgaaattgaattagcaacaaagccaccttaaaaaatggaaagtaagaacaagttgtcaaatcttaaagcaattaaatcactt |
5163669 |
T |
 |
| Q |
110 |
tnnnnnnn-caaaggaaaatagtggtgcacaaagcaggggaaatttgtaagacatggacaggggtggtccagagggtggacgggagggacgacagtctag |
208 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
5163670 |
ttaaaaaaacaaaggaaaatagtggtgcacaaagcaggggaaatttgtaagacatggacaggggtggtccagagggtgggcgggagggacgacagcctag |
5163769 |
T |
 |
| Q |
209 |
ggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5163770 |
ggcactattattttaggggcatcaaaattattatttttacttagtagtt |
5163818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 34909509 - 34909442
Alignment:
| Q |
190 |
gggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||||| ||| | |||| ||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
34909509 |
gggagggacggcagcccagggtaccattattttaggggcattaaaattattatttttacttactagtt |
34909442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 34345847 - 34345924
Alignment:
| Q |
180 |
gagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||| ||| ||||||||||| ||| |||| |||||| |||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
34345847 |
gaggatgggcgggagggacggtagtttaggacaccataatttgaggggaatcaaaattattatttttacttagtagtt |
34345924 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 2887217 - 2887142
Alignment:
| Q |
170 |
gggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttt |
245 |
Q |
| |
|
|||||| || |||||||| ||||||| || || |||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
2887217 |
gggtggccctgagggtgggtgggaggggcggcaatctagggcaccattattttaggggtaccaaaattattatttt |
2887142 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 16647987 - 16647942
Alignment:
| Q |
207 |
agggcaccattattttaggggcatcaaaattattatttttacttag |
252 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
16647987 |
agggcaccatttttttaggggcatcaaaattattatttttatttag |
16647942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 30257934 - 30257884
Alignment:
| Q |
207 |
agggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||| ||||| |
|
|
| T |
30257934 |
agggcaccattattttaaaggcatcaaaattattttttttacttaatagtt |
30257884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 28556752 - 28556708
Alignment:
| Q |
212 |
accattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
28556752 |
accattattttaggcgca-caaaattattatttttacttagtagtt |
28556708 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 4206703 - 4206665
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
4206703 |
ttttaggggcaccaaaattattatatttacttagtagtt |
4206665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 37911412 - 37911458
Alignment:
| Q |
211 |
caccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| |||||||||| |
|
|
| T |
37911412 |
caccatttatttaggggcaccaaaattattatttttgcttagtagtt |
37911458 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 17271404 - 17271367
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtagt |
256 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
17271404 |
ttttaggggtaccaaaattattatttttacttagtagt |
17271367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 15925456 - 15925496
Alignment:
| Q |
210 |
gcaccattattttaggggcatcaaaattattatttttactt |
250 |
Q |
| |
|
|||||||| ||| ||||| |||||||||||||||||||||| |
|
|
| T |
15925456 |
gcaccattttttaaggggtatcaaaattattatttttactt |
15925496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 40877080 - 40877028
Alignment:
| Q |
205 |
ctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||| |||| | |||||||| || |||||||||||||||||||| |||||| |
|
|
| T |
40877080 |
ctagggtaccaattttttagggacaccaaaattattatttttacttggtagtt |
40877028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 10669058 - 10668981
Alignment:
| Q |
180 |
gagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||| |||||||| | ||||| ||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
10669058 |
gagggtgggcgggaggggcagcagtccagggcaccatttttttaggggcaccaaaattattatttttacttattagtt |
10668981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 4338049 - 4337994
Alignment:
| Q |
202 |
agtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| |
|
|
| T |
4338049 |
agtctagggcaccattattttatgggcaccaaaattattacttttacttagtagtt |
4337994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 12174294 - 12174346
Alignment:
| Q |
205 |
ctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||||| ||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
12174294 |
ctagggcaccattttttaagaggcaccaaaattattatttttacttagtagtt |
12174346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 34969375 - 34969423
Alignment:
| Q |
210 |
gcaccattattttaggggcatcaaaattattatttttacttagtagttg |
258 |
Q |
| |
|
|||| ||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
34969375 |
gcactatttttttaagggcatcaaaattattatttttacttagtagttg |
34969423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 13229285 - 13229332
Alignment:
| Q |
209 |
ggcaccattattttaggggcatcaaaattattatttttacttagtagt |
256 |
Q |
| |
|
||||||||| |||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
13229285 |
ggcaccatttttttagaggcaccaaaattattatttttacttagtagt |
13229332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 33344786 - 33344822
Alignment:
| Q |
221 |
ttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
33344786 |
ttaggggcaccaaaattattatttttacttagtagtt |
33344822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 34329992 - 34329920
Alignment:
| Q |
180 |
gagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttag |
252 |
Q |
| |
|
||||||||||||||| | || |||| ||| ||||||| || |||||||| ||||||||||||||||||||| |
|
|
| T |
34329992 |
gagggtggacgggagaggcggcagttcaggacaccatttttataggggcagtaaaattattatttttacttag |
34329920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 35122090 - 35122054
Alignment:
| Q |
221 |
ttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
35122090 |
ttaggggcaccaaaattattatttttacttagtagtt |
35122054 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 13481709 - 13481671
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
13481709 |
ttttaggggcatcaaaattattatttttccgtagtagtt |
13481671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 52706854 - 52706765
Alignment:
| Q |
167 |
caggggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagt |
256 |
Q |
| |
|
|||| |||| || ||||| ||||||||||| ||| |||||||| ||||||| ||||| ||| ||||||||||||||||||| |||||||| |
|
|
| T |
52706854 |
caggagtggccctgagggcggacgggaggggcgatagtctaggacaccatttttttaagggtatcaaaattattatttttatttagtagt |
52706765 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 27541218 - 27541174
Alignment:
| Q |
210 |
gcaccattattttaggggcatcaaaattattatttttacttagta |
254 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27541218 |
gcaccacttttttaggggcatcaaaattattatttttatttagta |
27541174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 33510251 - 33510200
Alignment:
| Q |
207 |
agggcaccattattttagggg-catcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||| ||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
33510251 |
agggcaccatttttttaatggacatcaaaattattatttttacttagtagtt |
33510200 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 13236100 - 13236190
Alignment:
| Q |
168 |
aggggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattatta-tttttacttagtagtt |
257 |
Q |
| |
|
||||| ||||| |||||||| | |||||| ||||| ||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
13236100 |
aggggaggtcctgagggtgggcaggaggggcgacaacctagggcaccattgtttaaggggcaccaaaattattattttttacttagtagtt |
13236190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 9191180 - 9191226
Alignment:
| Q |
211 |
caccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
9191180 |
caccatttttttaggagcatcaaaattattatttttacttagtagtt |
9191226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 22930257 - 22930347
Alignment:
| Q |
167 |
caggggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||| |||| ||||| || || |||| |||||||| ||||||||||| ||| ||||||| ||||||||| ||||||||||| ||||| |
|
|
| T |
22930257 |
caggggttgtcctgagggcgggcgcaaggggcgacagtccagggcaccattttttcaggggcaccaaaattataatttttacttaatagtt |
22930347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 26835744 - 26835697
Alignment:
| Q |
210 |
gcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
26835744 |
gcaccatttttttaggggcaccaaaattattatttttacttaatagtt |
26835697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 13580507 - 13580461
Alignment:
| Q |
211 |
caccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
13580507 |
caccatttttttaggggcaccaaaattattatttttacttaatagtt |
13580461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 38075865 - 38075793
Alignment:
| Q |
180 |
gagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagt |
253 |
Q |
| |
|
||||||||| ||||||| || ||| ||| ||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
38075865 |
gagggtggatgggaggggtgatcgtccaggacaccatt-ttttagggacatcaaaattattatttttacttagt |
38075793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 28376632 - 28376683
Alignment:
| Q |
207 |
agggcaccattatttt-aggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||| |||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
28376632 |
agggcaccattttttttagcggcaccaaaattattatttttacttagtagtt |
28376683 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 255
Target Start/End: Complemental strand, 40620775 - 40620745
Alignment:
| Q |
225 |
gggcatcaaaattattatttttacttagtag |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
40620775 |
gggcatcaaaattattatttttacttagtag |
40620745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 4350823 - 4350774
Alignment:
| Q |
208 |
gggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||| | |||||| |||| ||||||||||||||||| ||||||||| |
|
|
| T |
4350823 |
gggcaccacttttttagaggcaccaaaattattatttttatttagtagtt |
4350774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 43872466 - 43872503
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtagt |
256 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
43872466 |
ttttaggggcatccatattattatttttacttagtagt |
43872503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 30095913 - 30095863
Alignment:
| Q |
207 |
agggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
30095913 |
agggcaccatttttttaggggcaccaaaattattatttttacttagtagtt |
30095863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 35812590 - 35812634
Alignment:
| Q |
207 |
agggcaccattattttaggggcatcaaaattattatttttactta |
251 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
35812590 |
agggcaccatttttttaggggcatcaaaattattatttttactta |
35812634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 256
Target Start/End: Complemental strand, 3940831 - 3940755
Alignment:
| Q |
180 |
gagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagt |
256 |
Q |
| |
|
|||||||||||||||| | | |||| |||||| |||| ||||| | ||||| |||||||||||||||||||||||| |
|
|
| T |
3940831 |
gagggtggacgggaggaatggtagtccagggcatcatttttttaagcgcatccaaattattatttttacttagtagt |
3940755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 21292871 - 21292833
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21292871 |
ttttaggggcaccaaaattattatttttacttagtagtt |
21292833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 257
Target Start/End: Complemental strand, 26914510 - 26914446
Alignment:
| Q |
192 |
gagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||| ||| ||||||| || |||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
26914510 |
gaggaacggcagtctaaggtaccatttttttagggt-atcaaaattattatttttacttagtagtt |
26914446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 1694196 - 1694144
Alignment:
| Q |
198 |
cgacagtctagggcaccattattttaggggcatcaaaattattatttttactt |
250 |
Q |
| |
|
|||||||| || |||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
1694196 |
cgacagtccagagcaccatttttttaggagcatcaaaataattatttttactt |
1694144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 15134592 - 15134556
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtag |
255 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
15134592 |
ttttaggggcaccaaaattattatttttacttagtag |
15134556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 21828137 - 21828180
Alignment:
| Q |
207 |
agggcaccattattttaggggcatcaaaattattatttttactt |
250 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
21828137 |
agggcaccatttctttaggggcataaaaattattatttttactt |
21828180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 36066101 - 36066136
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagta |
254 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
36066101 |
ttttagggtcatcaaaattattatttttacttagta |
36066136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 37996497 - 37996535
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
37996497 |
ttttatgggcaccaaaattattatttttacttagtagtt |
37996535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 49164907 - 49164869
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
49164907 |
ttttaagggcatcataattattatttttacttagtagtt |
49164869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 23869983 - 23870073
Alignment:
| Q |
167 |
caggggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||| || ||||| || | ||||| |||||| | ||||||||| | ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23869983 |
caggggtggccctgagggcgggctcgaggggcgacagcccagggcaccacttttttaggggcaccaaaattattatttttacttagtagtt |
23870073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 6137156 - 6137230
Alignment:
| Q |
183 |
ggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||| ||||| || ||||| ||| ||||||| ||||||| |||| |||||||||||||||| ||||||||| |
|
|
| T |
6137156 |
ggtggacgagaggggcggcagtccaggacaccatttttttaggagcattaaaattattatttttatttagtagtt |
6137230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 12320383 - 12320430
Alignment:
| Q |
211 |
caccattattttaggggcatcaaaattatta-tttttacttagtagtt |
257 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
12320383 |
caccattattttaggggcatgaaaattattactttttacttagtagtt |
12320430 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 7540554 - 7540516
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
7540554 |
ttttaggggcatcaaaattattatttttacttattagtt |
7540516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 35372282 - 35372206
Alignment:
| Q |
180 |
gagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||| ||||| | || ||||||||| ||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
35372282 |
gagggtggacgtgaggggtggaagcctagggcactgttattttagggacatcaaa-ttattatttttacttagtagtt |
35372206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 8733213 - 8733165
Alignment:
| Q |
211 |
caccattattttaggggcatcaaaattattatttttacttagtagttga |
259 |
Q |
| |
|
||||||| ||||| ||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
8733213 |
caccatttttttaagggcaccaaaattattaattttacttagtagttga |
8733165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 36071747 - 36071667
Alignment:
| Q |
170 |
gggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttactt |
250 |
Q |
| |
|
|||||| ||| ||||||| |||||||| || ||||| ||| |||||| || |||||||| ||||||||||||||||||| |
|
|
| T |
36071747 |
gggtggcccaaagggtgggcgggaggggcggcagtccaggttaccatttttctaggggcactaaaattattatttttactt |
36071667 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 43517466 - 43517423
Alignment:
| Q |
207 |
agggcaccattattttaggggcatcaaaattattatttttactt |
250 |
Q |
| |
|
|||||| |||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
43517466 |
agggcatcattatttgaggggaatcaaaattattatttttactt |
43517423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 7853231 - 7853321
Alignment:
| Q |
167 |
caggggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||| || ||||||| |||||| | || || |||||||| |||||| ||| |||| |||| |||||||||||||||||||||| |
|
|
| T |
7853231 |
caggggtggccctaagggtgggcgggagaggcggcaacctagggcatcattatcttacaggcaccaaatttattatttttacttagtagtt |
7853321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 55236269 - 55236307
Alignment:
| Q |
219 |
ttttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
55236269 |
ttttaagggcatcaaaattattatttttatttagtagtt |
55236307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 55147966 - 55147930
Alignment:
| Q |
220 |
tttaggggcatcaaaattattatttttacttagtagt |
256 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
55147966 |
tttaggggcaccaaaattattatttttacttaatagt |
55147930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 8)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 7887340 - 7887290
Alignment:
| Q |
207 |
agggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
7887340 |
agggcaccattggtttaggggcaccaaaattattatttttacttagtagtt |
7887290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 12263799 - 12263757
Alignment:
| Q |
209 |
ggcaccattattttaggggcatcaaaattattatttttactta |
251 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
12263799 |
ggcaccatttttttaggggcaccaaaattattatttttactta |
12263757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 16570642 - 16570598
Alignment:
| Q |
214 |
cattattttaggggcatcaaaattattatttttacttagtagttg |
258 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
16570642 |
catttttttagaggcatcaaaattattatttttacttattagttg |
16570598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 20870609 - 20870660
Alignment:
| Q |
206 |
tagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||||||| ||||| | | ||||||||||||||||||| ||||||||| |
|
|
| T |
20870609 |
tagggcaccatttttttaagagtatcaaaattattatttttatttagtagtt |
20870660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 32257831 - 32257788
Alignment:
| Q |
214 |
cattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||| ||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
32257831 |
catttttttaggagcatcaaaataattatttttacttagtagtt |
32257788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 39542389 - 39542436
Alignment:
| Q |
210 |
gcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||| |||||||| |
|
|
| T |
39542389 |
gcaccatttttacaggggcatcaaaattattatttttacgtagtagtt |
39542436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 18600168 - 18600218
Alignment:
| Q |
207 |
agggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||| | || |||||||||||||||||||||||||| |||||||| |
|
|
| T |
18600168 |
agggcaccaattttataggggcatcaaaattattatttttatatagtagtt |
18600218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 3597069 - 3597018
Alignment:
| Q |
202 |
agtctagggcaccattattttaggggcatcaaaattattatttttacttagta |
254 |
Q |
| |
|
|||||||||||||| | |||||||| ||||||||||||||||||| |||||| |
|
|
| T |
3597069 |
agtctagggcaccagttttttagggt-atcaaaattattatttttatttagta |
3597018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 23898088 - 23897998
Alignment:
| Q |
167 |
caggggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||| || |||||||| | ||||| || ||| | |||| |||||| ||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
23898088 |
caggggtggccctgagggtgggcttgaggggcggcagcccagggaaccatttttttaggggcaccaaaattatcatttttacttagtagtt |
23897998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 10976296 - 10976223
Alignment:
| Q |
180 |
gagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagt |
253 |
Q |
| |
|
|||||||| |||| ||| || ||||| | ||||||||| ||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
10976296 |
gagggtgggcgggcggggcggcagtccaaggcaccatttttttaggggcatcaaaattattagttttatttagt |
10976223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 35405300 - 35405346
Alignment:
| Q |
207 |
agggcaccattattttaggggcatcaaaattattatttttacttagta |
254 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
35405300 |
agggcaccatt-ttttaggggcaccaaaattattatttttacttagta |
35405346 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 1240407 - 1240453
Alignment:
| Q |
211 |
caccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1240407 |
caccatttttttaggggcactaaaattattatttttacttagtagtt |
1240453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 257
Target Start/End: Complemental strand, 8246913 - 8246823
Alignment:
| Q |
165 |
gacaggggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||||||| || | |||||| ||| |||| || |||| ||||||||||| ||||||| || ||||||||||||||||||||| ||||| |
|
|
| T |
8246913 |
gacaggggtggccctgcgggtgggcggaaggggcggcagttcagggcaccatttttttagg--caccaaaattattatttttacttaatagtt |
8246823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 22667747 - 22667683
Alignment:
| Q |
192 |
gagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagt |
256 |
Q |
| |
|
||||| || ||| ||||||||||||| |||||||||| |||||||||||||||| |||||||| |
|
|
| T |
22667747 |
gaggggcggcagcctagggcaccatttatttaggggcacaaaaattattatttttatttagtagt |
22667683 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 45385427 - 45385339
Alignment:
| Q |
169 |
ggggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||| || |||||||| |||||| | | ||| ||||| ||||||| | | ||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
45385427 |
ggggtggccctgagggtgggcgggagaggtggcagcctaggacaccattttataaggggtatcaaaattattatttttatttagtagtt |
45385339 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 257
Target Start/End: Original strand, 23935123 - 23935214
Alignment:
| Q |
166 |
acaggggtggtccagagggtggacgggagggacgacagtctagggcaccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
|||||||||| || || ||||| | ||||| || ||| | ||||||||||| |||||||| || |||||||| ||||||||||||||||| |
|
|
| T |
23935123 |
acaggggtggccctgaaggtgggcttgaggggcggcagcccagggcaccatttttttagggtcaccaaaattaacatttttacttagtagtt |
23935214 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 40916 - 40870
Alignment:
| Q |
211 |
caccattattttaggggcatcaaaattattatttttacttagtagtt |
257 |
Q |
| |
|
||||||| | ||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
40916 |
caccattttattaggggcaccaaaattattatttttactttgtagtt |
40870 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 65016 - 65060
Alignment:
| Q |
209 |
ggcaccattattttaggggcatcaaaattattatttttacttagta |
254 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
65016 |
ggcaccatttttttaggggca-caaaattattatatttacttagta |
65060 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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