View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5600_low_3 (Length: 478)

Name: NF5600_low_3
Description: NF5600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5600_low_3
NF5600_low_3
[»] chr8 (17 HSPs)
chr8 (18-468)||(2516740-2517190)
chr8 (393-455)||(10170375-10170437)
chr8 (299-348)||(2515727-2515776)
chr8 (385-436)||(34259803-34259854)
chr8 (216-322)||(2506022-2506128)
chr8 (384-426)||(3066041-3066083)
chr8 (173-229)||(2512635-2512692)
chr8 (391-424)||(25799154-25799187)
chr8 (386-426)||(1979413-1979453)
chr8 (390-424)||(16824392-16824426)
chr8 (388-422)||(31551857-31551891)
chr8 (394-436)||(43534933-43534975)
chr8 (391-424)||(25488801-25488834)
chr8 (384-436)||(6501494-6501546)
chr8 (384-436)||(14496033-14496084)
chr8 (390-426)||(28144067-28144103)
chr8 (390-426)||(29096951-29096987)
[»] chr6 (10 HSPs)
chr6 (385-426)||(34625734-34625775)
chr6 (384-426)||(34598537-34598579)
chr6 (385-420)||(14244051-14244086)
chr6 (393-423)||(6294557-6294587)
chr6 (384-426)||(30781416-30781458)
chr6 (388-426)||(32577482-32577520)
chr6 (389-426)||(4945264-4945301)
chr6 (394-426)||(7564182-7564214)
chr6 (385-425)||(17422274-17422314)
chr6 (384-436)||(24102051-24102103)
[»] chr4 (9 HSPs)
chr4 (385-426)||(32369930-32369971)
chr4 (395-437)||(18783987-18784029)
chr4 (384-437)||(3458172-3458225)
chr4 (384-427)||(26369447-26369490)
chr4 (387-426)||(31277042-31277081)
chr4 (385-427)||(12441788-12441830)
chr4 (385-426)||(843159-843200)
chr4 (393-422)||(2796554-2796583)
chr4 (390-426)||(12710008-12710044)
[»] chr3 (12 HSPs)
chr3 (391-426)||(49636844-49636879)
chr3 (385-436)||(28576716-28576767)
chr3 (379-426)||(32166201-32166248)
chr3 (383-426)||(47542533-47542576)
chr3 (393-426)||(18268023-18268056)
chr3 (391-436)||(21768612-21768657)
chr3 (391-432)||(55053787-55053828)
chr3 (384-436)||(7563206-7563258)
chr3 (391-431)||(31207845-31207885)
chr3 (390-426)||(36301998-36302034)
chr3 (392-436)||(41036776-41036820)
chr3 (361-409)||(55108269-55108317)
[»] chr1 (6 HSPs)
chr1 (390-433)||(26698193-26698236)
chr1 (379-426)||(29230059-29230106)
chr1 (392-426)||(48317604-48317638)
chr1 (385-426)||(1118414-1118455)
chr1 (392-425)||(4769327-4769360)
chr1 (386-423)||(6440870-6440907)
[»] chr2 (13 HSPs)
chr2 (385-431)||(11781576-11781622)
chr2 (386-426)||(14268751-14268791)
chr2 (387-426)||(13252319-13252358)
chr2 (385-427)||(6736490-6736532)
chr2 (384-426)||(8765419-8765461)
chr2 (384-426)||(28341323-28341365)
chr2 (393-450)||(30563417-30563474)
chr2 (386-438)||(31095144-31095197)
chr2 (386-426)||(34687007-34687048)
chr2 (386-426)||(34709419-34709460)
chr2 (391-436)||(39459790-39459835)
chr2 (394-426)||(17427327-17427359)
chr2 (386-426)||(42043215-42043255)
[»] scaffold0147 (1 HSPs)
scaffold0147 (384-437)||(37670-37723)
[»] chr7 (8 HSPs)
chr7 (363-426)||(18750852-18750917)
chr7 (385-426)||(28266474-28266515)
chr7 (385-421)||(31020714-31020750)
chr7 (383-422)||(40826513-40826552)
chr7 (391-423)||(7139462-7139494)
chr7 (385-425)||(13803668-13803708)
chr7 (392-420)||(13859528-13859556)
chr7 (384-436)||(22371078-22371130)
[»] chr5 (3 HSPs)
chr5 (395-426)||(28322251-28322282)
chr5 (393-426)||(9878050-9878083)
chr5 (392-437)||(39828473-39828518)


Alignment Details
Target: chr8 (Bit Score: 443; Significance: 0; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 18 - 468
Target Start/End: Original strand, 2516740 - 2517190
Alignment:
Q  18 aaagacgtacattaaagtaaaggaagacaatatttttgttggtcaataaaaagaaactaaatggattcttggtaatcatactcgttttcaagttacaact 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2516740 aaagatgtacattaaagtaaaggaagacaatatttttgttggtcaataaaaagaaactaaatggattcttggtaatcatactcgttttcaagttacaact 2516839  T
Q  118 tacaacaaatcattcctaacccaagaattaagaaactattgtttgtttctgctggctgctaaaattctcttcgattaggctaactatgtaacacttgtag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2516840 tacaacaaatcattcctaacccaagaattaagaaactattgtttgtttctgctggctgctaaaattttcttcgattaggctaactatgtaacacttgtag 2516939  T
Q  218 aattgaaattttctaatatatttaggcaaattctagtaattttgcaatgtaacagtactttcggaatataagtattgagcaaagaccttgattgttgtta 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2516940 aattgaaattttctaatatatttaggcaaattctagtaattttgcaatgtaacagtactttcggaatataagtattgagcaaagaccttgattgttgtta 2517039  T
Q  318 ttgtaattagggaaattcaaaacctatgaagcactcacacaggacacgacactacgacactgacaatgacaccggtaataatttgagaaaatgaattaat 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2517040 ttgtaattagggaaattcaaaacctatgaagcactcacacaggacacgacactacgacactgacaatgacaccggtaataatttgagaaaatgaattaat 2517139  T
Q  418 tgaatgtaactacacgtgttatgttggtgtcagataccagacatgcctttg 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2517140 tgaatgtaactacacgtgttatgttggtgtcagataccagacatgcctttg 2517190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 455
Target Start/End: Complemental strand, 10170437 - 10170375
Alignment:
Q  393 taataatttgagaaaatgaattaattgaatgtaactacacgtgttatgttggtgtcagatacc 455  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||| ||||||    
T  10170437 taataatttgagaaaataaattaattgaatgtaactacatgggttgtgttggtgtctgatacc 10170375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 348
Target Start/End: Original strand, 2515727 - 2515776
Alignment:
Q  299 aagaccttgattgttgttattgtaattagggaaattcaaaacctatgaag 348  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  2515727 aagaccttgattgttgttattgtaattagggaaatttagaacctatgaag 2515776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 436
Target Start/End: Complemental strand, 34259854 - 34259803
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||| ||||||    
T  34259854 gacatcggtaataatttgagaaaatgaaataattgaatataactagacgtgt 34259803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 2506022 - 2506128
Alignment:
Q  216 agaattgaaattttctaatatatttaggcaaattctagtaattttgcaatgtaacagtactttcggaatataagtattgagcaaagaccttgattgttgt 315  Q
    |||||||||||||| ||||| | |||||| |||||||||| ||| |  |  | |||||| ||||| ||||||  || |||||||| |||||||||||||     
T  2506022 agaattgaaattttgtaataaaattaggctaattctagtattttggttacattacagtaatttcgtaatatagctagtgagcaaaaaccttgattgttga 2506121  T
Q  316 tattgta 322  Q
    |||||||    
T  2506122 tattgta 2506128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 3066041 - 3066083
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  3066041 tgacacaggtaataatttgagaaaatggattaattgaatgtaa 3066083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 2512635 - 2512692
Alignment:
Q  173 ctgctaaaattctcttcgattaggctaactatgt-aacacttgtagaattgaaatttt 229  Q
    |||||| |||||||||| |||||||||||||||| |||| || |||||||||||||||    
T  2512635 ctgctacaattctcttcaattaggctaactatgtaaacatttctagaattgaaatttt 2512692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 424
Target Start/End: Original strand, 25799154 - 25799187
Alignment:
Q  391 ggtaataatttgagaaaatgaattaattgaatgt 424  Q
    ||||||||||||||||||||||||||||||||||    
T  25799154 ggtaataatttgagaaaatgaattaattgaatgt 25799187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 1979413 - 1979453
Alignment:
Q  386 acaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  1979413 acaccggtaataatttgagaaaattaattaattaaatgtaa 1979453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 424
Target Start/End: Original strand, 16824392 - 16824426
Alignment:
Q  390 cggtaataatttgagaaaatgaattaattgaatgt 424  Q
    |||||||||||||||||||||||||| ||||||||    
T  16824392 cggtaataatttgagaaaatgaattatttgaatgt 16824426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 422
Target Start/End: Complemental strand, 31551891 - 31551857
Alignment:
Q  388 accggtaataatttgagaaaatgaattaattgaat 422  Q
    |||||||||||||||||||||||||| ||||||||    
T  31551891 accggtaataatttgagaaaatgaataaattgaat 31551857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 436
Target Start/End: Original strand, 43534933 - 43534975
Alignment:
Q  394 aataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    ||||||||||||||||||| || ||||||||||||||| ||||    
T  43534933 aataatttgagaaaatgaaatatttgaatgtaactacatgtgt 43534975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 424
Target Start/End: Original strand, 25488801 - 25488834
Alignment:
Q  391 ggtaataatttgagaaaatgaattaattgaatgt 424  Q
    |||| |||||||||||||||||||||||||||||    
T  25488801 ggtattaatttgagaaaatgaattaattgaatgt 25488834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 6501494 - 6501546
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    |||||| ||||||||||||||| |||||| ||||| |||||||| ||| ||||    
T  6501494 tgacactggtaataatttgagagaatgaaataattaaatgtaaccacatgtgt 6501546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 14496084 - 14496033
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    ||||||| ||||||||||||||||||| | | |||||||||||||||| ||||    
T  14496084 tgacaccagtaataatttgagaaaatg-agtgattgaatgtaactacatgtgt 14496033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 426
Target Start/End: Complemental strand, 28144103 - 28144067
Alignment:
Q  390 cggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  28144103 cggtaataatttgagaaaatcaattaatagaatgtaa 28144067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 29096951 - 29096987
Alignment:
Q  390 cggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  29096951 cggtaataatttaagaaaataaattaattgaatgtaa 29096987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 34625734 - 34625775
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  34625734 gacaccgataataatttgagaaaatgaattaattgaatgtaa 34625775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 34598537 - 34598579
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||| ||||||||||||||||||||||||||| ||||||    
T  34598537 tgacaccgataataatttgagaaaatgaattaattggatgtaa 34598579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 420
Target Start/End: Complemental strand, 14244086 - 14244051
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattga 420  Q
    |||||||||| |||||||||||||||||||||||||    
T  14244086 gacaccggtagtaatttgagaaaatgaattaattga 14244051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 423
Target Start/End: Complemental strand, 6294587 - 6294557
Alignment:
Q  393 taataatttgagaaaatgaattaattgaatg 423  Q
    |||||||||||||||||||||||||||||||    
T  6294587 taataatttgagaaaatgaattaattgaatg 6294557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 30781458 - 30781416
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||||||| |||||||| |||||||||||| |||||||||    
T  30781458 tgacaccggtactaatttgataaaatgaattaactgaatgtaa 30781416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 426
Target Start/End: Complemental strand, 32577520 - 32577482
Alignment:
Q  388 accggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||| || |||||||||||||||||||||||||||||    
T  32577520 accggtgatgatttgagaaaatgaattaattgaatgtaa 32577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 4945264 - 4945301
Alignment:
Q  389 ccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  4945264 ccggtaattgtttgagaaaatgaattaattgaatgtaa 4945301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 426
Target Start/End: Complemental strand, 7564214 - 7564182
Alignment:
Q  394 aataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||||||||| ||||||||||||||||    
T  7564214 aataatttgagaaaataaattaattgaatgtaa 7564182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 17422314 - 17422274
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgta 425  Q
    ||||||| |||||||||||||||||||  ||||||||||||    
T  17422314 gacaccgataataatttgagaaaatgatataattgaatgta 17422274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 24102103 - 24102051
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    |||||| |||||||||||||| || |||| || ||||||||||| ||||||||    
T  24102103 tgacactggtaataatttgagtaagtgaactatttgaatgtaaccacacgtgt 24102051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 32369971 - 32369930
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  32369971 gacaccgataataatttgagaaaatgaattaattgaatgtaa 32369930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 437
Target Start/End: Original strand, 18783987 - 18784029
Alignment:
Q  395 ataatttgagaaaatgaattaattgaatgtaactacacgtgtt 437  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  18783987 ataatttgagaaaatgaagtaattgaatgtaattacacgtgtt 18784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 3458225 - 3458172
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgtt 437  Q
    ||||||||||||||| | ||||||||||| ||||||||||||| || |||||||    
T  3458225 tgacaccggtaataaatggagaaaatgaaataattgaatgtaattatacgtgtt 3458172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 427
Target Start/End: Complemental strand, 26369490 - 26369447
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaac 427  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||    
T  26369490 tgacatcggtagtaatttgagaaaatgaattatttgaatgtaac 26369447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 31277081 - 31277042
Alignment:
Q  387 caccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  31277081 caccgataataatttgagaaaatgaactaattgaatgtaa 31277042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 427
Target Start/End: Complemental strand, 12441830 - 12441788
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaac 427  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||    
T  12441830 gacaccggtaatactttgagaaaatgaatcaattgaatctaac 12441788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 843200 - 843159
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||    
T  843200 gacactggtaataatttgagaaaatgaattatttgaacgtaa 843159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 422
Target Start/End: Original strand, 2796554 - 2796583
Alignment:
Q  393 taataatttgagaaaatgaattaattgaat 422  Q
    ||||||||||||||||||||||||||||||    
T  2796554 taataatttgagaaaatgaattaattgaat 2796583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 12710008 - 12710044
Alignment:
Q  390 cggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  12710008 cggtaataatttgagaaaataaattaattgaacgtaa 12710044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 426
Target Start/End: Complemental strand, 49636879 - 49636844
Alignment:
Q  391 ggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||||||||||||||||||||||||||||||||    
T  49636879 ggtaataatttgagaaaatgaattaattgaatgtaa 49636844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 436
Target Start/End: Original strand, 28576716 - 28576767
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    |||||||||||||||||||||||||||   |||||||||||| |||| ||||    
T  28576716 gacaccggtaataatttgagaaaatgacaaaattgaatgtaattacatgtgt 28576767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 426
Target Start/End: Complemental strand, 32166248 - 32166201
Alignment:
Q  379 gacaatgacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||| |||||| |||||||||||||||||||||  |||||||||||||    
T  32166248 gacattgacactggtaataatttgagaaaatgacataattgaatgtaa 32166201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 426
Target Start/End: Original strand, 47542533 - 47542576
Alignment:
Q  383 atgacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||| |||||||||||||||||||||| || ||||||||||    
T  47542533 atgacactggtaataatttgagaaaatgaactatttgaatgtaa 47542576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 18268056 - 18268023
Alignment:
Q  393 taataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||||||||||||||||||||||||| ||||    
T  18268056 taataatttgagaaaatgaattaattgaacgtaa 18268023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 436
Target Start/End: Original strand, 21768612 - 21768657
Alignment:
Q  391 ggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    ||||||||||||||||||||||||| ||||| ||||| ||| ||||    
T  21768612 ggtaataatttgagaaaatgaattatttgaacgtaaccacatgtgt 21768657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 432
Target Start/End: Original strand, 55053787 - 55053828
Alignment:
Q  391 ggtaataatttgagaaaatgaattaattgaatgtaactacac 432  Q
    ||||||||||| |||||||||||||  |||||||||||||||    
T  55053787 ggtaataatttaagaaaatgaattatatgaatgtaactacac 55053828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Complemental strand, 7563258 - 7563206
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    |||||||  |||||||||||||| ||| | |||||||||||| ||||||||||    
T  7563258 tgacaccaataataatttgagaatatggaataattgaatgtatctacacgtgt 7563206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 31207845 - 31207885
Alignment:
Q  391 ggtaataatttgagaaaatgaattaattgaatgtaactaca 431  Q
    |||||| ||||||||||||||  ||||||||||||||||||    
T  31207845 ggtaattatttgagaaaatgacataattgaatgtaactaca 31207885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 36301998 - 36302034
Alignment:
Q  390 cggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  36301998 cggtaataatgtgagaaaataaattaattgaatgtaa 36302034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 436
Target Start/End: Complemental strand, 41036820 - 41036776
Alignment:
Q  392 gtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    ||||||||||||||||||||  || ||||||||||| ||||||||    
T  41036820 gtaataatttgagaaaatgatatagttgaatgtaaccacacgtgt 41036776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 55108317 - 55108269
Alignment:
Q  361 acacgacactacgacactgacaatgacaccggtaataatttgagaaaat 409  Q
    |||||||||||  | | |||||||||||||||||||||||||| |||||    
T  55108317 acacgacactaatatattgacaatgacaccggtaataatttgataaaat 55108269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 26698236 - 26698193
Alignment:
Q  390 cggtaataatttgagaaaatgaattaattgaatgtaactacacg 433  Q
    |||||||||| |||||||||||||||||||||||||| ||||||    
T  26698236 cggtaataatctgagaaaatgaattaattgaatgtaattacacg 26698193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 426
Target Start/End: Original strand, 29230059 - 29230106
Alignment:
Q  379 gacaatgacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||||    
T  29230059 gacattgacaccggtaataatttgagaaaatgacataattgaatgtaa 29230106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 48317604 - 48317638
Alignment:
Q  392 gtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||||||||||||||||| |||||||||||||    
T  48317604 gtaataatttgagaaaatgaaataattgaatgtaa 48317638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 1118455 - 1118414
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||| ||| ||||||||| ||||||||||||||||||||||    
T  1118455 gacacgggtgataatttgaaaaaatgaattaattgaatgtaa 1118414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 425
Target Start/End: Complemental strand, 4769360 - 4769327
Alignment:
Q  392 gtaataatttgagaaaatgaattaattgaatgta 425  Q
    |||||||||||||||||||| |||||||||||||    
T  4769360 gtaataatttgagaaaatgagttaattgaatgta 4769327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 423
Target Start/End: Complemental strand, 6440907 - 6440870
Alignment:
Q  386 acaccggtaataatttgagaaaatgaattaattgaatg 423  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  6440907 acactggtaataatttgagaaaatgaatttattgaatg 6440870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 11781622 - 11781576
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaactaca 431  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||    
T  11781622 gacaccagtaataatttgagaaaatgaaatatttgaatgtaactaca 11781576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 14268791 - 14268751
Alignment:
Q  386 acaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  14268791 acaccggtaataatttgagaaaatgacttaattgaacgtaa 14268751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 13252358 - 13252319
Alignment:
Q  387 caccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||||||||| ||||||||||||||| ||||||||||    
T  13252358 caccggtaataatgtgagaaaatgaattagttgaatgtaa 13252319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 427
Target Start/End: Original strand, 6736490 - 6736532
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaac 427  Q
    |||||||||||||||||||||| ||| | ||||||||||||||    
T  6736490 gacaccggtaataatttgagaatatggaataattgaatgtaac 6736532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 8765461 - 8765419
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||| ||||||| |||||| |||||||||||||||||    
T  8765461 tgacaccggtgataatttaagaaaacgaattaattgaatgtaa 8765419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 28341323 - 28341365
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||| ||||||||| |||||||||||||||||||| |||||||    
T  28341323 tgacgccggtaatagtttgagaaaatgaattaattaaatgtaa 28341365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 450
Target Start/End: Original strand, 30563417 - 30563474
Alignment:
Q  393 taataatttgagaaaatgaattaattgaatgtaactacacgtgttatgttggtgtcag 450  Q
    |||||||||||||||||||  ||||| |||||||||| | ||||| ||| ||||||||    
T  30563417 taataatttgagaaaatgacataattcaatgtaactataggtgttgtgtcggtgtcag 30563474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 31095144 - 31095197
Alignment:
Q  386 acaccggtaataatttgagaaaat-gaattaattgaatgtaactacacgtgtta 438  Q
    |||| ||||||||||||||||||| ||| ||||||||| |||||||| ||||||    
T  31095144 acactggtaataatttgagaaaatggaagtaattgaatataactacatgtgtta 31095197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 34687007 - 34687048
Alignment:
Q  386 acaccggtaataatttgagaaaatga-attaattgaatgtaa 426  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  34687007 acaccggtaataatttgagaaaatgatattaattgaaagtaa 34687048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 34709419 - 34709460
Alignment:
Q  386 acaccggtaataatttgagaaaatga-attaattgaatgtaa 426  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  34709419 acaccggtaataatttgagaaaatgatattaattgaaagtaa 34709460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 436
Target Start/End: Original strand, 39459790 - 39459835
Alignment:
Q  391 ggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    ||||||||||| || |||||||||||||||||||||  ||||||||    
T  39459790 ggtaataatttaaggaaatgaattaattgaatgtaatcacacgtgt 39459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 394 - 426
Target Start/End: Complemental strand, 17427359 - 17427327
Alignment:
Q  394 aataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||||||||||||||||||||| ||||    
T  17427359 aataatttgagaaaatgaattaattgaaggtaa 17427327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 42043255 - 42043215
Alignment:
Q  386 acaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||| ||||||||| | ||||||||||||||||||||||    
T  42043255 acaccgataataatttaataaaatgaattaattgaatgtaa 42043215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 37723 - 37670
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgtt 437  Q
    ||||||||||||||| | ||||||||||| ||||||||||||| || |||||||    
T  37723 tgacaccggtaataaatggagaaaatgaaataattgaatgtaattatacgtgtt 37670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 426
Target Start/End: Original strand, 18750852 - 18750917
Alignment:
Q  363 acgacactacgacactgaca-at-gacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||||||||||||| || |||| |||||||||||| |||||||||  |||||||||||||    
T  18750852 acgacactacgacactgacacatcgacaacggtaataatttaagaaaatgacataattgaatgtaa 18750917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 28266474 - 28266515
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||||||||||||||||||||| ||||||||| ||||||    
T  28266474 gacaccggtaataatttgagaaaataaattaattggatgtaa 28266515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 31020750 - 31020714
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaa 421  Q
    ||||||||||| |||||||||||||||||||||||||    
T  31020750 gacaccggtaacaatttgagaaaatgaattaattgaa 31020714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 422
Target Start/End: Original strand, 40826513 - 40826552
Alignment:
Q  383 atgacaccggtaataatttgagaaaatgaattaattgaat 422  Q
    ||||||| ||| ||||||||||||||||||||||||||||    
T  40826513 atgacactggtgataatttgagaaaatgaattaattgaat 40826552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 423
Target Start/End: Complemental strand, 7139494 - 7139462
Alignment:
Q  391 ggtaataatttgagaaaatgaattaattgaatg 423  Q
    ||||||| |||||||||||||||||||||||||    
T  7139494 ggtaatattttgagaaaatgaattaattgaatg 7139462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 425
Target Start/End: Original strand, 13803668 - 13803708
Alignment:
Q  385 gacaccggtaataatttgagaaaatgaattaattgaatgta 425  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  13803668 gacacaggtaataatttgagaaaatgaaataattgagtgta 13803708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 420
Target Start/End: Original strand, 13859528 - 13859556
Alignment:
Q  392 gtaataatttgagaaaatgaattaattga 420  Q
    |||||||||||||||||||||||||||||    
T  13859528 gtaataatttgagaaaatgaattaattga 13859556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 22371078 - 22371130
Alignment:
Q  384 tgacaccggtaataatttgagaaaatgaattaattgaatgtaactacacgtgt 436  Q
    |||||| |||| |||| |||||||| ||| |||||||||||||||||| ||||    
T  22371078 tgacactggtattaatatgagaaaaggaaataattgaatgtaactacatgtgt 22371130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 426
Target Start/End: Original strand, 28322251 - 28322282
Alignment:
Q  395 ataatttgagaaaatgaattaattgaatgtaa 426  Q
    ||||||||||||||||||||||||||||||||    
T  28322251 ataatttgagaaaatgaattaattgaatgtaa 28322282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Complemental strand, 9878083 - 9878050
Alignment:
Q  393 taataatttgagaaaatgaattaattgaatgtaa 426  Q
    |||||||||||||| |||||||||||||||||||    
T  9878083 taataatttgagaatatgaattaattgaatgtaa 9878050  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 39828473 - 39828518
Alignment:
Q  392 gtaataatttgagaaaatgaattaattgaatgtaactacacgtgtt 437  Q
    ||||||||||||||| ||||| |||||||||||||| ||| |||||    
T  39828473 gtaataatttgagaatatgaaataattgaatgtaaccacatgtgtt 39828518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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