View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5604_high_3 (Length: 397)

Name: NF5604_high_3
Description: NF5604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5604_high_3
NF5604_high_3
[»] chr5 (28 HSPs)
chr5 (1-354)||(34708913-34709266)
chr5 (104-176)||(29087925-29087997)
chr5 (127-176)||(29046029-29046078)
chr5 (127-175)||(6476793-6476841)
chr5 (128-176)||(19128770-19128818)
chr5 (221-285)||(19981110-19981174)
chr5 (130-174)||(38056796-38056840)
chr5 (104-175)||(27364466-27364537)
chr5 (90-173)||(36038698-36038781)
chr5 (130-176)||(234701-234747)
chr5 (130-176)||(237826-237872)
chr5 (128-174)||(7632097-7632143)
chr5 (130-176)||(19359704-19359750)
chr5 (127-176)||(28705881-28705930)
chr5 (127-167)||(10554556-10554596)
chr5 (127-166)||(235602-235641)
chr5 (128-167)||(1283503-1283542)
chr5 (128-166)||(1281846-1281884)
chr5 (128-174)||(1554086-1554132)
chr5 (133-175)||(10554523-10554565)
chr5 (130-176)||(14478921-14478967)
chr5 (130-176)||(19360481-19360527)
chr5 (104-174)||(43510234-43510304)
chr5 (133-174)||(1283533-1283574)
chr5 (127-176)||(4084880-4084929)
chr5 (127-176)||(28705165-28705214)
chr5 (129-174)||(38057599-38057644)
chr5 (129-173)||(25858213-25858257)
[»] chr3 (23 HSPs)
chr3 (90-176)||(14871154-14871240)
chr3 (128-176)||(48648204-48648252)
chr3 (128-175)||(21727533-21727580)
chr3 (128-174)||(17603171-17603217)
chr3 (127-172)||(265101-265146)
chr3 (127-176)||(46150732-46150781)
chr3 (129-174)||(48413322-48413367)
chr3 (127-166)||(264477-264516)
chr3 (127-174)||(31974654-31974701)
chr3 (130-176)||(44699826-44699872)
chr3 (130-176)||(55373712-55373758)
chr3 (128-165)||(17603965-17604002)
chr3 (130-167)||(17605716-17605753)
chr3 (127-176)||(37520564-37520613)
chr3 (127-176)||(37988221-37988270)
chr3 (127-176)||(41458034-41458083)
chr3 (127-176)||(45081406-45081455)
chr3 (129-174)||(54458670-54458715)
chr3 (127-167)||(981677-981717)
chr3 (127-175)||(48507035-48507083)
chr3 (128-176)||(48649177-48649225)
chr3 (128-176)||(48765074-48765122)
chr3 (128-172)||(51827498-51827542)
[»] chr7 (37 HSPs)
chr7 (104-174)||(8376768-8376837)
chr7 (104-174)||(14686133-14686203)
chr7 (57-176)||(46428750-46428869)
chr7 (127-176)||(7668482-7668531)
chr7 (127-176)||(25599022-25599071)
chr7 (127-176)||(26636103-26636152)
chr7 (127-176)||(46428187-46428236)
chr7 (127-175)||(30661458-30661506)
chr7 (127-175)||(37949606-37949654)
chr7 (128-175)||(13785597-13785644)
chr7 (128-167)||(24453730-24453769)
chr7 (127-174)||(25342499-25342546)
chr7 (127-174)||(25343305-25343352)
chr7 (127-174)||(30660595-30660642)
chr7 (127-174)||(37950470-37950517)
chr7 (127-174)||(42421053-42421100)
chr7 (104-174)||(37395479-37395549)
chr7 (130-176)||(45099899-45099945)
chr7 (127-176)||(26636863-26636912)
chr7 (127-175)||(19067638-19067686)
chr7 (128-172)||(43065120-43065164)
chr7 (106-166)||(48670909-48670969)
chr7 (127-174)||(3772529-3772576)
chr7 (127-174)||(24389619-24389666)
chr7 (127-174)||(27948448-27948495)
chr7 (128-174)||(1417610-1417656)
chr7 (130-176)||(3903345-3903391)
chr7 (130-176)||(36378812-36378858)
chr7 (128-174)||(38225979-38226025)
chr7 (128-166)||(47719708-47719746)
chr7 (129-174)||(3029203-3029248)
chr7 (127-176)||(18977772-18977821)
chr7 (130-175)||(19068401-19068446)
chr7 (127-176)||(21496986-21497035)
chr7 (127-176)||(25343242-25343291)
chr7 (129-174)||(31278159-31278204)
chr7 (130-174)||(24719337-24719381)
[»] chr1 (32 HSPs)
chr1 (104-174)||(7558451-7558521)
chr1 (127-174)||(30932798-30932845)
chr1 (57-166)||(11704741-11704850)
chr1 (90-174)||(169593-169677)
chr1 (128-176)||(25469090-25469138)
chr1 (127-175)||(34309233-34309281)
chr1 (127-174)||(4433850-4433897)
chr1 (127-174)||(10121555-10121602)
chr1 (127-174)||(49680813-49680860)
chr1 (128-174)||(28182076-28182122)
chr1 (127-176)||(8987790-8987839)
chr1 (129-174)||(10120785-10120830)
chr1 (127-176)||(13263519-13263568)
chr1 (127-176)||(30663358-30663407)
chr1 (127-176)||(30663979-30664028)
chr1 (127-176)||(36389775-36389824)
chr1 (127-175)||(7559202-7559250)
chr1 (127-174)||(4439209-4439256)
chr1 (127-174)||(13262835-13262882)
chr1 (129-176)||(19172580-19172627)
chr1 (133-176)||(26118673-26118716)
chr1 (128-166)||(47967872-47967910)
chr1 (127-176)||(7406245-7406294)
chr1 (127-176)||(11548800-11548849)
chr1 (129-174)||(17172667-17172712)
chr1 (129-166)||(24991980-24992017)
chr1 (127-176)||(25468510-25468559)
chr1 (130-175)||(27256718-27256763)
chr1 (130-175)||(34308474-34308519)
chr1 (130-175)||(46391872-46391917)
chr1 (130-174)||(17171933-17171977)
chr1 (127-163)||(46812190-46812226)
[»] chr4 (36 HSPs)
chr4 (127-176)||(47785802-47785851)
chr4 (104-167)||(43146628-43146691)
chr4 (130-175)||(19080387-19080432)
chr4 (127-174)||(47688482-47688529)
chr4 (104-174)||(2446141-2446211)
chr4 (128-166)||(24551927-24551965)
chr4 (127-176)||(9365170-9365219)
chr4 (127-176)||(20774183-20774232)
chr4 (127-176)||(30573712-30573761)
chr4 (130-174)||(2444375-2444419)
chr4 (128-176)||(8248524-8248572)
chr4 (128-176)||(8266189-8266237)
chr4 (127-167)||(16903646-16903686)
chr4 (127-175)||(53732437-53732485)
chr4 (130-174)||(53772810-53772854)
chr4 (127-174)||(599304-599351)
chr4 (127-174)||(11938714-11938761)
chr4 (127-174)||(26147035-26147082)
chr4 (129-176)||(31329722-31329769)
chr4 (129-172)||(52871303-52871346)
chr4 (128-167)||(55976176-55976215)
chr4 (128-174)||(53773590-53773636)
chr4 (118-175)||(2182515-2182572)
chr4 (129-174)||(3654520-3654565)
chr4 (127-176)||(7841545-7841594)
chr4 (139-176)||(12368670-12368707)
chr4 (118-175)||(19551042-19551099)
chr4 (127-176)||(24374790-24374839)
chr4 (129-174)||(42882686-42882731)
chr4 (130-171)||(53733737-53733778)
chr4 (128-176)||(8247697-8247745)
chr4 (130-166)||(19550297-19550333)
chr4 (128-176)||(24158824-24158872)
chr4 (128-172)||(55001444-55001488)
chr4 (128-164)||(55976959-55976995)
chr4 (127-175)||(56262480-56262528)
[»] scaffold0504 (1 HSPs)
scaffold0504 (130-176)||(5385-5431)
[»] chr8 (17 HSPs)
chr8 (128-174)||(32414527-32414573)
chr8 (127-176)||(41974641-41974690)
chr8 (127-174)||(38576304-38576351)
chr8 (106-176)||(32979805-32979875)
chr8 (127-176)||(8996976-8997025)
chr8 (128-176)||(3165125-3165173)
chr8 (127-174)||(31602019-31602066)
chr8 (129-176)||(37064817-37064864)
chr8 (130-176)||(8373698-8373744)
chr8 (130-175)||(8372915-8372960)
chr8 (131-176)||(37732827-37732872)
chr8 (118-175)||(39860867-39860924)
chr8 (129-169)||(14754053-14754093)
chr8 (128-176)||(22320375-22320423)
chr8 (128-172)||(26654381-26654425)
chr8 (128-176)||(31641512-31641560)
chr8 (118-174)||(32413761-32413817)
[»] chr6 (14 HSPs)
chr6 (127-176)||(10171276-10171325)
chr6 (127-176)||(19311001-19311050)
chr6 (127-176)||(26529515-26529564)
chr6 (128-176)||(19311830-19311878)
chr6 (127-167)||(19322992-19323032)
chr6 (127-175)||(19323769-19323817)
chr6 (128-176)||(33436277-33436325)
chr6 (127-166)||(8488479-8488518)
chr6 (127-174)||(10171968-10172015)
chr6 (127-174)||(26528825-26528872)
chr6 (130-176)||(505537-505583)
chr6 (104-174)||(25060818-25060888)
chr6 (90-167)||(9441945-9442022)
chr6 (127-167)||(9441246-9441286)
[»] chr2 (27 HSPs)
chr2 (129-174)||(12725619-12725664)
chr2 (127-175)||(29719448-29719496)
chr2 (127-174)||(1297125-1297172)
chr2 (127-174)||(9275589-9275636)
chr2 (127-174)||(29559422-29559469)
chr2 (127-176)||(1296380-1296429)
chr2 (127-176)||(9276332-9276381)
chr2 (127-176)||(22560570-22560619)
chr2 (127-176)||(23343780-23343829)
chr2 (104-176)||(24121269-24121341)
chr2 (128-175)||(9540333-9540380)
chr2 (127-170)||(11007238-11007281)
chr2 (127-166)||(11750268-11750307)
chr2 (127-174)||(15774205-15774252)
chr2 (139-174)||(20589031-20589066)
chr2 (128-174)||(15902885-15902931)
chr2 (128-166)||(16692977-16693015)
chr2 (128-174)||(22301873-22301919)
chr2 (128-166)||(29513150-29513188)
chr2 (130-176)||(36237632-36237678)
chr2 (129-174)||(8669200-8669245)
chr2 (118-175)||(15902122-15902179)
chr2 (129-174)||(23857028-23857073)
chr2 (129-174)||(27178649-27178694)
chr2 (127-172)||(29512376-29512421)
chr2 (130-174)||(27177915-27177959)
chr2 (127-167)||(42182617-42182657)
[»] scaffold0176 (1 HSPs)
scaffold0176 (129-176)||(26592-26639)
[»] scaffold0085 (1 HSPs)
scaffold0085 (130-175)||(22076-22121)
[»] scaffold1207 (1 HSPs)
scaffold1207 (129-175)||(1588-1634)
[»] scaffold0096 (1 HSPs)
scaffold0096 (130-176)||(39896-39942)
[»] scaffold2007 (1 HSPs)
scaffold2007 (127-176)||(751-800)


Alignment Details
Target: chr5 (Bit Score: 318; Significance: 1e-179; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 354
Target Start/End: Original strand, 34708913 - 34709266
Alignment:
Q  1 ccataaacacaggaaattgcaggtttcaagaaaaagaaatactaaggtgcgaaaattaaagttggtgtcatcatgcactttcaaacgagtaattaacagt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34708913 ccataaacacaggaaattgaaggtttcaagaaaaagaaatactaaggtgcgaaaattaaagttggtgtcaccatgcactttcaaacgagtaattaacagt 34709012  T
Q  101 ctctagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctgagatttgcaccataatactaattga 200  Q
    |||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34709013 ctctagattaaaccaaatcaatggatgagatttggtgccaacgaatccgttgacacctggtgtcaacagatcctgagatttgcaccataatactaattga 34709112  T
Q  201 gattcaacaaaccacaaaaattgcaaaccgttaaaataaatgagtttaggtagaagtaccttggaaaaatagcatgaagaatcgtaaaataaattgagtt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  34709113 gattcaacaaaccacaaaaattgcaaaccgttaaaataaatgagtttaggtagaagtaccttggaaaaatagcatgaagaattgtaaaataaactgagtt 34709212  T
Q  301 taggcacatacaagcgatgaaggagagggatcacgtgtgccactgttttaagga 354  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  34709213 taggcacatacaagcgatgaaggagagggatcacgtgtgccatcgttttaagga 34709266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 29087997 - 29087925
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||||||| ||| || ||||||||||| |||  |||||||||||||||||||||||| ||||||||    
T  29087997 tagattaaaccaaattaatggatgagatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctga 29087925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 29046078 - 29046029
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  29046078 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 29046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 6476793 - 6476841
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  6476793 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 6476841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 19128818 - 19128770
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  19128818 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 19128770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 19981174 - 19981110
Alignment:
Q  221 ttgcaaaccgttaaaataaatgagtttaggtagaagtaccttggaaaaatagcatgaagaatcgt 285  Q
    ||||||| |||||| |||||||||||||||||||||    |||||||||||||||||| ||||||    
T  19981174 ttgcaaatcgttaatataaatgagtttaggtagaagggatttggaaaaatagcatgaaaaatcgt 19981110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 38056840 - 38056796
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  38056840 atttggtgtcaaccaatccgttgacacctggtgtcaacagatcct 38056796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 27364466 - 27364537
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||||| | ||| |  ||||||||||| |||| ||||| |||||||||||||||||| |||||||    
T  27364466 tagattaaaccaatttaatggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcctg 27364537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 36038781 - 36038698
Alignment:
Q  90 taattaacagtctctagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcc 173  Q
    ||||||| || || ||||||||||||| | ||| || |||||||||||  ||| |||||||||| ||||||||||||| |||||    
T  36038781 taattaatagcctttagattaaaccaatttaatggatgagatttggtgttaacgaatccgttgatacctggtgtcaacggatcc 36038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 234747 - 234701
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||    
T  234747 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 234701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 237826 - 237872
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||    
T  237826 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 237872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 7632143 - 7632097
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||    
T  7632143 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 7632097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 19359750 - 19359704
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||    
T  19359750 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 19359704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 28705881 - 28705930
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||| ||| |||| |||||||||||||||||||||||| ||||||||    
T  28705881 gagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctga 28705930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 10554596 - 10554556
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  10554596 gagatttggtgtcaacgaatccgttgacacctggtgtcaac 10554556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 235641 - 235602
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  235641 gagatttggtgtcaacgaatccgttgacacctggtgtcaa 235602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 1283503 - 1283542
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  1283503 agatttggtgtcaacgaatccgttgacacctggtgtcaac 1283542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 1281884 - 1281846
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  1281884 agatttggtgtcaacgaatccgttgacacctggtgtcaa 1281846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 1554086 - 1554132
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  1554086 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 1554132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 10554565 - 10554523
Alignment:
Q  133 tggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||| |||| |||||||||||||||||||||||| |||||||    
T  10554565 tggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 10554523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 14478967 - 14478921
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  14478967 atttggtgtcaacgaatccgttgacacctgatgtcaacggatcctga 14478921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 19360481 - 19360527
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| ||| |||||||||||||||||||| ||||||||    
T  19360481 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctga 19360527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 43510304 - 43510234
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||||| | ||| || || ||||||||  ||| |||| ||||||||||||||||||| ||||||    
T  43510304 tagattaaaccaatttaatggatgaaatttggtgttaacgaatctgttgacacctggtgtcaacggatcct 43510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 1283533 - 1283574
Alignment:
Q  133 tggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||| |||| |||||||||||||||||||||||| ||||||    
T  1283533 tggtgtcaacgaatccgttgacacctggtgtcaacggatcct 1283574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 4084929 - 4084880
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||| |||||||||| ||||||||| ||||||||    
T  4084929 gagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctga 4084880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 28705214 - 28705165
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||||  ||| |||||||||||||||||||||||| ||| ||||    
T  28705214 gagatttggtgtaaacgaatccgttgacacctggtgtcaacggatactga 28705165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 38057599 - 38057644
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| ||||||||||||||| |||||||| ||||||    
T  38057599 gatttggtgtcaaccaatccgttgacacctagtgtcaacggatcct 38057644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 25858257 - 25858213
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcc 173  Q
    ||||||||| |||| ||||||||||||||| |||||||| |||||    
T  25858257 gatttggtgtcaacgaatccgttgacacctagtgtcaacggatcc 25858213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 14871240 - 14871154
Alignment:
Q  90 taattaacagtctctagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||| || ||||||||||||| || |||||||| ||||||||||| |||| ||| |||||||||||||||||||| ||||||||    
T  14871240 taattaatagcctctagattaaactaattcaatagatgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctga 14871154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 48648252 - 48648204
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  48648252 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 48648204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 21727533 - 21727580
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||    
T  21727533 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 21727580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 17603217 - 17603171
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||    
T  17603217 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 17603171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 265101 - 265146
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatc 172  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||    
T  265101 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 265146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 46150732 - 46150781
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||||||||||||||| |||||||| ||||||||    
T  46150732 gagatttggtgtcaacgaatccgttgacacctagtgtcaacggatcctga 46150781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 48413367 - 48413322
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| ||||||||||||||||||||||||| |||||    
T  48413367 gatttggtgtcaacgaatccgttgacacctggtgtcaacaaatcct 48413322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 264516 - 264477
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  264516 gagatttggtgtcaacaaatccattgacacctggtgtcaa 264477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 31974701 - 31974654
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||||||||||||| |||||||||| ||||||    
T  31974701 gagatttggtgtcaacgaatccgttgacacttggtgtcaacggatcct 31974654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 44699826 - 44699872
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| |||||||||||||||||||||| | ||||||||    
T  44699826 atttggtgtcaacgaatccgttgacacctggtgtcagctgatcctga 44699872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 55373712 - 55373758
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| ||||||||||||||||||||||||  |||||||    
T  55373712 atttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctga 55373758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 17603965 - 17604002
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtca 165  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  17603965 agatttggtgtcaacgaatccgttgacacctggtgtca 17604002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 17605753 - 17605716
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  17605753 atttggtgtcaacgaatccgttgacacctggtgtcaac 17605716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 37520564 - 37520613
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||| |||||||||||||| ||||| ||||||||    
T  37520564 gagatttggtgtcaacgaattcgttgacacctggtatcaacggatcctga 37520613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 37988221 - 37988270
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||| |||||||||||||||||||  ||||||||    
T  37988221 gagatttggtgtcaacgaattcgttgacacctggtgtcaatggatcctga 37988270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 41458083 - 41458034
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||| |||||  |||||||    
T  41458083 gagatttggtgtcaacgaatccgttgacacctggtatcaacgaatcctga 41458034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 45081406 - 45081455
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||  ||||||||| ||||||||    
T  45081406 gagatttggtgtcaacgaatccgttgacactaggtgtcaacggatcctga 45081455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 54458670 - 54458715
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| |||||||||||||| ||||||||| ||||||    
T  54458670 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcct 54458715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 981717 - 981677
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  981717 gagatttggtgtcaacgaattcgttgacacctggtgtcaac 981677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 48507035 - 48507083
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| |||| ||| | |||||||||||||||||| |||||||    
T  48507035 gagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 48507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 48649177 - 48649225
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||| ||||||||||||||||||  ||||||||    
T  48649177 agatttggtgtcaacgaatctgttgacacctggtgtcaatggatcctga 48649225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 48765074 - 48765122
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| ||||| |||||||||||||||||  ||||||||    
T  48765074 agatttggtgtcaacgaatccattgacacctggtgtcaatggatcctga 48765122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 51827498 - 51827542
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatc 172  Q
    |||||||||| |||| |||||||||||||| ||||||||| ||||    
T  51827498 agatttggtgacaacgaatccgttgacaccaggtgtcaacggatc 51827542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 8376768 - 8376837
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||||||| |||||| ||||||| ||| ||| || |||||||||||||||||||||||||||||    
T  8376768 tagattaaaccaaattaatagatgagatttagtgtcaagaa-tccgttgacacctggtgtcaacagatcct 8376837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 14686203 - 14686133
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||||| | ||| || ||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  14686203 tagattaaaccaatttaatggatgagatttggtgtcaacaaatccgttgacacttggtgtcaacggatcct 14686133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 46428750 - 46428869
Alignment:
Q  57 taaagttggtgtcatcatgcactttcaaacgagtaattaacagtctctagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacac 156  Q
    |||| ||| ||||||  |||||||| ||  || ||||||| || || ||||||||||||| | ||| || |||||||| || |||| ||| |||||||||    
T  46428750 taaatttgatgtcatggtgcacttttaagtgaataattaatagcctttagattaaaccaatttaatggatgagatttgatgtcaacgaattcgttgacac 46428849  T
Q  157 ctggtgtcaacagatcctga 176  Q
    ||||||||||| ||||||||    
T  46428850 ctggtgtcaacggatcctga 46428869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 7668531 - 7668482
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  7668531 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 7668482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 25599071 - 25599022
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  25599071 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 25599022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 26636152 - 26636103
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  26636152 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 26636103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 46428236 - 46428187
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  46428236 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 46428187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 30661458 - 30661506
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  30661458 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 30661506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 37949654 - 37949606
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  37949654 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 37949606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 13785597 - 13785644
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||    
T  13785597 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 13785644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 24453730 - 24453769
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  24453730 agatttggtgtcaacaaatccgttgacacctggtgtcaac 24453769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 25342546 - 25342499
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  25342546 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25342499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 25343352 - 25343305
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  25343352 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 25343305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 30660642 - 30660595
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  30660642 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 30660595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 37950470 - 37950517
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  37950470 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 37950517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 42421053 - 42421100
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  42421053 gagatttggtgtcaacaaatcggttgacatctggtgtcaacagatcct 42421100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 37395479 - 37395549
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||||| | ||| || || ||||||||  ||| |||||||||||||||||||||||| ||||||    
T  37395479 tagattaaaccaatttaatggatgaaatttggtgttaacgaatccgttgacacctggtgtcaacggatcct 37395549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 45099899 - 45099945
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||    
T  45099899 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 45099945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 26636863 - 26636912
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||||||||||||||| |||||||| ||||||||    
T  26636863 gagatttggtgtcaacgaatccgttgacaccttgtgtcaacggatcctga 26636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 19067686 - 19067638
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| |||| ||||||||||||| |||||||||| |||||||    
T  19067686 gagatttggtgtcaacgaatccgttgacacgtggtgtcaacggatcctg 19067638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 43065120 - 43065164
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatc 172  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||    
T  43065120 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 43065164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 48670909 - 48670969
Alignment:
Q  106 gattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    ||||||| ||||| ||| || |||||||||||  ||||||| |||||||||||||||||||    
T  48670909 gattaaaacaaattaatggatgagatttggtgtgaacaaattcgttgacacctggtgtcaa 48670969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 3772529 - 3772576
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  3772529 gagatttggtgtcaacgaatacgttgacacctggtgtcaacggatcct 3772576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 24389619 - 24389666
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||  |||||||||||||||||||||||| ||||||    
T  24389619 gagatttggtgtcaatgaatccgttgacacctggtgtcaacggatcct 24389666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 27948495 - 27948448
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  27948495 gagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 27948448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 1417656 - 1417610
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  1417656 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 1417610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 3903345 - 3903391
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| ||||  ||||||||||||||||||||||| ||||||||    
T  3903345 atttggtgtcaacggatccgttgacacctggtgtcaacggatcctga 3903391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 36378858 - 36378812
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| ||||||| |||||| ||||||||||||||||||    
T  36378858 atttggtgtcaacgaatccgtcgacaccaggtgtcaacagatcctga 36378812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 38225979 - 38226025
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  38225979 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 38226025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 47719708 - 47719746
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  47719708 agatttggtgtcaacgaatccgttgacacctggtgtcaa 47719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 3029203 - 3029248
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  3029203 gatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 3029248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 18977772 - 18977821
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||||  ||| |||||||||||||||||||||||  ||||||||    
T  18977772 gagatttggtgttaacgaatccgttgacacctggtgtcaatggatcctga 18977821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 19068401 - 19068446
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    |||||||| |||| ||| |||||||||||||||||||| |||||||    
T  19068401 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctg 19068446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 21496986 - 21497035
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||| |||||||||||| ||||||| ||||||||    
T  21496986 gagatttggtgtcaacgaattcgttgacacctgttgtcaacggatcctga 21497035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 25343242 - 25343291
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||| | |||||||||||||||||| ||||||||    
T  25343242 gagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctga 25343291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 31278159 - 31278204
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| |||||||||||| ||||||||||| ||||||    
T  31278159 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 31278204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 24719381 - 24719337
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||| |||| |||||||||||| ||||||||||| ||||||    
T  24719381 atttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 24719337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 7558521 - 7558451
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||||| | ||| || ||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  7558521 tagattaaaccaatttaatggatgagatttggtgtcaacaaatccgttgacacttggtgtcaacggatcct 7558451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 30932798 - 30932845
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  30932798 gagatttggtgccaacgaatccgttgacacctggtgtcaacggatcct 30932845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 11704741 - 11704850
Alignment:
Q  57 taaagttggtgtcatcatgcactttcaaacgagtaattaacagtctctagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacac 156  Q
    |||| ||| ||||||  |||||||| ||  || ||||||| || || ||||||||||||| | ||| || ||||||||||| |||| |||||||||||||    
T  11704741 taaatttgatgtcatggtgcacttttaagtgaataattaatagcctttagattaaaccaatttaatggatgagatttggtgtcaacgaatccgttgacac 11704840  T
Q  157 ctggtgtcaa 166  Q
     |||||||||    
T  11704841 ttggtgtcaa 11704850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 169593 - 169677
Alignment:
Q  90 taattaacagtctctagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||| || |||| ||||||||||| | ||| |  ||||||||||| ||| |||| |||||||||||||||||||| ||||||    
T  169593 taattaatagcctcttgattaaaccaacttaatggttgagatttggtgtcaataaattcgttgacacctggtgtcaacggatcct 169677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 25469090 - 25469138
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  25469090 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 25469138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 34309233 - 34309281
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  34309233 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 34309281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 4433850 - 4433897
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  4433850 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 4433897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 10121555 - 10121602
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  10121555 gagatttggtgtcaaccaatccgttgacacctggtgtcaacggatcct 10121602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 49680860 - 49680813
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  49680860 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 49680813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 28182076 - 28182122
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||    
T  28182076 agatttggtgtcaaagaatccgttgacacctggtgtcaacagatcct 28182122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 8987839 - 8987790
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  8987839 gagatttggtgtcaacgaatccgttgacacctgatgtcaaccgatcctga 8987790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 10120830 - 10120785
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||    
T  10120830 gatttggtgtcaaccaatccgttgacacctggtgtcaacggatcct 10120785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 13263519 - 13263568
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||||| |||||||||||||||||| ||||||||    
T  13263519 gagatttggtgtcaacgaatccattgacacctggtgtcaacggatcctga 13263568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 30663407 - 30663358
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||| ||||||||||||| ||||||||    
T  30663407 gagatttggtgtcaacgaatccgttgatacctggtgtcaacggatcctga 30663358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 30663979 - 30664028
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||| ||||||||| ||||||||    
T  30663979 gagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctga 30664028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 36389824 - 36389775
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| || |||||||||||||||| ||||||||| ||||||||    
T  36389824 gagatttggtgtcagcaaatccgttgacaccaggtgtcaacggatcctga 36389775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 7559202 - 7559250
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| ||||  ||||||||||||||||||||||| |||||||    
T  7559202 gagatttggtgtcaacggatccgttgacacctggtgtcaacggatcctg 7559250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 4439209 - 4439256
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||| ||||||||| ||||||    
T  4439209 gagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 4439256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 13262882 - 13262835
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  13262882 gagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 13262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 19172580 - 19172627
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||| |||| |||||||||||||||||||||||  ||||||||    
T  19172580 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctga 19172627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 26118716 - 26118673
Alignment:
Q  133 tggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||    
T  26118716 tggtgtcaacaaatccgttgacatctggtgtcaacggatcctga 26118673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 47967910 - 47967872
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  47967910 agatttggtgtcaacgaatccgttgacacctggtgtcaa 47967872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 7406294 - 7406245
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||| |||| ||||||||||||||| ||||||||    
T  7406294 gagatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctga 7406245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 11548849 - 11548800
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||| ||| |||| |||| ||||||||||||||||||| ||||||||    
T  11548849 gagatttagtgtcaacgaatctgttgacacctggtgtcaacggatcctga 11548800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 17172667 - 17172712
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||| | |||| |||||||||||||||||||||||| ||||||    
T  17172667 gatttggcgtcaacgaatccgttgacacctggtgtcaacggatcct 17172712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 24992017 - 24991980
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  24992017 gatttggtgtcaacgaatccgttgacacctggtgtcaa 24991980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 25468559 - 25468510
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||  |||||||||||||||||||||||  ||||||||    
T  25468559 gagatttggtgtcaatgaatccgttgacacctggtgtcaatggatcctga 25468510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 27256718 - 27256763
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    |||||||| |||| ||| |||||||||||||||||||| |||||||    
T  27256718 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctg 27256763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 34308519 - 34308474
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    |||||||| |||| ||| |||||||||||||||||||| |||||||    
T  34308519 atttggtgtcaacgaatacgttgacacctggtgtcaacggatcctg 34308474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 46391872 - 46391917
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||| || |||| |||||||||||||||||||||||| |||||||    
T  46391872 atttgatgtcaacgaatccgttgacacctggtgtcaacggatcctg 46391917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 17171977 - 17171933
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||| |||| ||| |||||||||||||||||||| ||||||    
T  17171977 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 17171933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 46812190 - 46812226
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgt 163  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  46812190 gagatttggtgtcaacgaatccgttgacacctggtgt 46812226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 47785802 - 47785851
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  47785802 gagatttggtgtcaacgaatccgttgacacctggtgtcaacagatcctga 47785851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 43146628 - 43146691
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    ||||||||||||||| ||| || ||||||||||| |||  ||||||||||||||||||||||||    
T  43146628 tagattaaaccaaattaatggatgagatttggtgtcaaggaatccgttgacacctggtgtcaac 43146691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 19080432 - 19080387
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||    
T  19080432 atttggtgtcaacgaatccgttgacacctggtgtcaacagatcctg 19080387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 47688482 - 47688529
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  47688482 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 47688529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 2446141 - 2446211
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||||| | ||| || |||||||||||  ||| |||| ||||||||||||||||||| ||||||    
T  2446141 tagattaaaccaatttaatggatgagatttggtgttaacgaatctgttgacacctggtgtcaacggatcct 2446211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 24551927 - 24551965
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  24551927 agatttggtgtcaacaaatccgttgacacctggtgtcaa 24551965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 9365219 - 9365170
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||||||| |||||||||||||||| ||| ||||||||    
T  9365219 gagatttggtgtcaacaaattcgttgacacctggtgttaacggatcctga 9365170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 20774183 - 20774232
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||  ||||||||    
T  20774183 gagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctga 20774232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 30573712 - 30573761
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||  ||||||||    
T  30573712 gagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctga 30573761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 2444419 - 2444375
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||    
T  2444419 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 2444375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 8248524 - 8248572
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||||||||||| ||||||||||| ||||||||    
T  8248524 agatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctga 8248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 8266189 - 8266237
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||||||||||| ||||||||||| ||||||||    
T  8266189 agatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctga 8266237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 16903646 - 16903686
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  16903646 gagatttggtgtcaacgaatccgttgacacctggtgtcaac 16903686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 53732485 - 53732437
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||| ||| |||| |||||||||||||||||||||||| |||||||    
T  53732485 gagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctg 53732437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 53772854 - 53772810
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||    
T  53772854 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 53772810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 599304 - 599351
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||| ||||||||| ||||||    
T  599304 gagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcct 599351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 11938761 - 11938714
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||| |||||||||||||||| ||||||||||    
T  11938761 gagatttggtgtcaacgaattcgttgacacctggtgtgaacagatcct 11938714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 26147035 - 26147082
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  26147035 gagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 26147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 31329722 - 31329769
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||  ||| |||||||||||||||||||||||| ||||||||    
T  31329722 gatttggtgttaacgaatccgttgacacctggtgtcaacggatcctga 31329769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 52871346 - 52871303
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatc 172  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||    
T  52871346 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 52871303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 167
Target Start/End: Complemental strand, 55976215 - 55976176
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  55976215 agatttggtgtcaacgaatccgttgacacctggtgtcaac 55976176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 53773590 - 53773636
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||| |||| |||||||||||||||| ||||||| ||||||    
T  53773590 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcct 53773636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 2182515 - 2182572
Alignment:
Q  118 tcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||| || ||||||||||| ||| | | ||||||||||||||||||||| |||||||    
T  2182515 tcaatggatgagatttggtgtcaatataaccgttgacacctggtgtcaacggatcctg 2182572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 3654520 - 3654565
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| ||||||||||||||||| |||||| ||||||    
T  3654520 gatttggtgtcaacgaatccgttgacacctggcgtcaacggatcct 3654565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 7841594 - 7841545
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||| ||||||| ||||||| ||||||||    
T  7841594 gagatttggtgtcaacgaatccgttaacacctgatgtcaacggatcctga 7841545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 176
Target Start/End: Original strand, 12368670 - 12368707
Alignment:
Q  139 caacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  12368670 caacaaatccgttgacacctagtgtcaacggatcctga 12368707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 19551042 - 19551099
Alignment:
Q  118 tcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||| || ||||||||||| ||| | | ||||||||||||||||||||| |||||||    
T  19551042 tcaatggatgagatttggtgtcaatataaccgttgacacctggtgtcaacggatcctg 19551099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 24374839 - 24374790
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||| |||||||| ||||||||||| ||||||||    
T  24374839 gagatttggtgtcaacgaattcgttgacagctggtgtcaacggatcctga 24374790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 42882686 - 42882731
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| |||||||||||| ||||||||||| ||||||    
T  42882686 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatcct 42882731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 53733737 - 53733778
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagat 171  Q
    |||||||| |||| ||||||||||||||||||||||| ||||    
T  53733737 atttggtgtcaacgaatccgttgacacctggtgtcaatagat 53733778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 8247745 - 8247697
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||| ||| |||| |||||||||||||| ||||||||| ||||||||    
T  8247745 agattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcctga 8247697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 166
Target Start/End: Complemental strand, 19550333 - 19550297
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    |||||||| |||| |||||||||||||||||||||||    
T  19550333 atttggtgtcaacgaatccgttgacacctggtgtcaa 19550297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 24158824 - 24158872
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||| ||||||||||||||||||  ||||||||    
T  24158824 agatttggtgtcaacgaatctgttgacacctggtgtcaatggatcctga 24158872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 55001444 - 55001488
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatc 172  Q
    |||||| ||| |||| |||||||||||||||||||||||| ||||    
T  55001444 agatttagtgtcaacgaatccgttgacacctggtgtcaacggatc 55001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 55976959 - 55976995
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtc 164  Q
    |||||||||| |||| |||||||||||||||||||||    
T  55976959 agatttggtgtcaacgaatccgttgacacctggtgtc 55976995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 56262528 - 56262480
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| |||| ||| | |||||||||||||||||| |||||||    
T  56262528 gagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctg 56262480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 5385 - 5431
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||    
T  5385 atttggtgtcaacaaatccgttgacacctggtgtcaacggatcctga 5431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 32414527 - 32414573
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||    
T  32414527 agatttggtgtcaacgaatccgttgacacctggtgtcaacagatcct 32414573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 41974690 - 41974641
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  41974690 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 41974641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 38576304 - 38576351
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  38576304 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 38576351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 32979805 - 32979875
Alignment:
Q  106 gattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||  |||||||| || | |||||||||  ||||||| |||||||||||||||||||| ||||||||    
T  32979805 gattaaattaaatcaatggatgtgatttggtgttaacaaattcgttgacacctggtgtcaacggatcctga 32979875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 8996976 - 8997025
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| ||||||||| ||||||||||||| ||||| ||||||||    
T  8996976 gagatttggtgtcaacaaatcagttgacacctggtatcaacggatcctga 8997025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 3165125 - 3165173
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  3165125 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctga 3165173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 31602066 - 31602019
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  31602066 gagatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcct 31602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 37064864 - 37064817
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||| |||  ||| |||||||||||||||||||||||||||||    
T  37064864 gatttggtgtcaatgaattcgttgacacctggtgtcaacagatcctga 37064817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 8373698 - 8373744
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| ||||||||||||| |||||||||| ||||||||    
T  8373698 atttggtgtcaacgaatccgttgacacttggtgtcaacggatcctga 8373744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 8372960 - 8372915
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    |||||||| |||| |||||||||||||| ||||||||| |||||||    
T  8372960 atttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctg 8372915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 37732872 - 37732827
Alignment:
Q  131 tttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||| |||| |||||||||||||| ||||||||| ||||||||    
T  37732872 tttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctga 37732827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 39860867 - 39860924
Alignment:
Q  118 tcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||| || ||||||||||| ||| | | ||||||||||||||||||||| |||||||    
T  39860867 tcaatggatgagatttggtgtcaatataaccgttgacacctggtgtcaacggatcctg 39860924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 14754053 - 14754093
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacag 169  Q
    ||||| ||| |||||||||||||||||||| ||||||||||    
T  14754053 gatttagtgtcaacaaatccgttgacacctagtgtcaacag 14754093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 22320423 - 22320375
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||||||||||||||||  ||||| ||||||||    
T  22320423 agatttggtgtcaacgaatccgttgacacctggcatcaacggatcctga 22320375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 26654381 - 26654425
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatc 172  Q
    |||||||||| |||| ||||| |||||||||||||||||| ||||    
T  26654381 agatttggtgtcaacgaatccattgacacctggtgtcaacggatc 26654425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 31641560 - 31641512
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| ||||| |||||||||||||||||  ||||||||    
T  31641560 agatttggtgtcaacgaatccattgacacctggtgtcaatggatcctga 31641512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 32413817 - 32413761
Alignment:
Q  118 tcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||| || ||||||||||| ||| | | ||||||||||||||||||||| ||||||    
T  32413817 tcaatggatgagatttggtgtcaatataaccgttgacacctggtgtcaacggatcct 32413761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 10171325 - 10171276
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  10171325 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 10171276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 19311050 - 19311001
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  19311050 gagatttggtgtcaacaaatccgttaacacctggtgtcaacggatcctga 19311001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 26529515 - 26529564
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  26529515 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 26529564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 19311830 - 19311878
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| ||||||||||||||||||||||||  |||||||    
T  19311830 agatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctga 19311878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 19323032 - 19322992
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  19323032 gagatttggtgtcaacgaatccgttgacacctggtgtcaac 19322992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 19323769 - 19323817
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| |||| ||| |||||||||||||||||||| |||||||    
T  19323769 gagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctg 19323817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 33436277 - 33436325
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||||| |||| |||||||||||| ||||||||||| ||||||||    
T  33436277 agatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctga 33436325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 8488518 - 8488479
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  8488518 gagatttggtgtcaacgaatccgttgacacctggtgtcaa 8488479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 10171968 - 10172015
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  10171968 gagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcct 10172015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 26528872 - 26528825
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  26528872 gagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatcct 26528825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 505583 - 505537
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| |||| ||||||||||| ||||||||||||||||    
T  505583 atttggtgtcaacgaatctgttgacacctgatgtcaacagatcctga 505537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 25060888 - 25060818
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||||| | ||| || ||||||| |||  ||| |||| ||||||||||||||||||| ||||||    
T  25060888 tagattaaaccaatttaatggatgagattttgtgttaacgaatctgttgacacctggtgtcaacggatcct 25060818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 9441945 - 9442022
Alignment:
Q  90 taattaacagtctctagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    ||||||| || || ||||||||||||| | ||| || || ||||||||  ||| |||||||||||||||| |||||||    
T  9441945 taattaatagcctttagattaaaccaatttaatggatgaaatttggtgtgaacgaatccgttgacacctgatgtcaac 9442022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 9441286 - 9441246
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    ||||||||||| ||||  |||||||||||||||||||||||    
T  9441286 gagatttggtgtcaacggatccgttgacacctggtgtcaac 9441246  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 12725619 - 12725664
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  12725619 gatttggtgtcaacaaatccgttgacacctggtgtcaacggatcct 12725664  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 29719496 - 29719448
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  29719496 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 29719448  T

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Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 1297125 - 1297172
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  1297125 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 1297172  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 9275636 - 9275589
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  9275636 gagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcct 9275589  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 29559422 - 29559469
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  29559422 gagatttggtgtcaacgaattcgttgacacctggtgtcaacagatcct 29559469  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 1296429 - 1296380
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||||    
T  1296429 gagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctga 1296380  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 9276332 - 9276381
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||||||||    
T  9276332 gagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctga 9276381  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 22560570 - 22560619
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  22560570 gagatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctga 22560619  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 23343829 - 23343780
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| || |||| |||||||||||| ||||||||||||||||||||    
T  23343829 gagatttgatgtcaacgaatccgttgacatctggtgtcaacagatcctga 23343780  T

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Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 24121269 - 24121341
Alignment:
Q  104 tagattaaaccaaatcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||||||| ||| || ||||||||||  |||  |||| ||||||||||||||||||  ||||||||    
T  24121269 tagattaaaccaaattaatggatgagatttggtctcaatgaatctgttgacacctggtgtcaatggatcctga 24121341  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 9540380 - 9540333
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    |||||||||| |||| ||| |||||||||||||||||||| |||||||    
T  9540380 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctg 9540333  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 11007281 - 11007238
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacaga 170  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||    
T  11007281 gagatttagtgtcaacgaatccgttgacacctggtgtcaacaga 11007238  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 11750307 - 11750268
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  11750307 gagatttggtgtcaacgaatccgttgacacctggtgtcaa 11750268  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 15774252 - 15774205
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||| |||||||| |||||||||| ||||||||| ||||||    
T  15774252 gagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcct 15774205  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 20589031 - 20589066
Alignment:
Q  139 caacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||||||||||||||| ||||||||||||||    
T  20589031 caacaaatccgttgacacctgatgtcaacagatcct 20589066  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 15902885 - 15902931
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||| ||| |||| |||||||||||||||||||||||| ||||||    
T  15902885 agattttgtgtcaacgaatccgttgacacctggtgtcaacggatcct 15902931  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 16692977 - 16693015
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  16692977 agatttggtgtcaacgaatccgttgacacctggtgtcaa 16693015  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 22301873 - 22301919
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||||| |||| ||| |||||||||||||||||||| ||||||    
T  22301873 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 22301919  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 29513150 - 29513188
Alignment:
Q  128 agatttggtgccaacaaatccgttgacacctggtgtcaa 166  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  29513150 agatttggtgtcaacgaatccgttgacacctggtgtcaa 29513188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 36237678 - 36237632
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||  |||||||||||||||||||||||| ||||||||    
T  36237678 atttggtgtcaatgaatccgttgacacctggtgtcaacggatcctga 36237632  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 8669200 - 8669245
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  8669200 gatttggtgtcaacgaatctgttgacacctggtgttaacagatcct 8669245  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 15902179 - 15902122
Alignment:
Q  118 tcaatagaagagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||| || ||||||||||| ||| | | ||||||||||||||||||||| |||||||    
T  15902179 tcaatggatgagatttggtgtcaatataaccgttgacacctggtgtcaacggatcctg 15902122  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 23857028 - 23857073
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||| |||||||||||||| ||||||||| ||||||    
T  23857028 gatttggtgtcaaccaatccgttgacaccaggtgtcaacggatcct 23857073  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 27178649 - 27178694
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    ||||||||| |||  |||||||||||||||||||||||| ||||||    
T  27178649 gatttggtgtcaaacaatccgttgacacctggtgtcaacggatcct 27178694  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 29512421 - 29512376
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatc 172  Q
    ||||||||||| |||||||| |||||||||| ||||||||| ||||    
T  29512421 gagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatc 29512376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 27177959 - 27177915
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcct 174  Q
    |||||||| |||| ||| |||||||||||||||||||| ||||||    
T  27177959 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcct 27177915  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 42182617 - 42182657
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaac 167  Q
    ||||||||||| |||| ||||| ||||||||||||||||||    
T  42182617 gagatttggtgtcaacgaatcccttgacacctggtgtcaac 42182657  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 26639 - 26592
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  26639 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctga 26592  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 175
Target Start/End: Original strand, 22076 - 22121
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    |||||||| |||| |||||||||||||||||||||||| |||||||    
T  22076 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctg 22121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 1634 - 1588
Alignment:
Q  129 gatttggtgccaacaaatccgttgacacctggtgtcaacagatcctg 175  Q
    ||||||||| |||| ||| |||||||||||||||||||| |||||||    
T  1634 gatttggtgtcaacgaattcgttgacacctggtgtcaaccgatcctg 1588  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 39942 - 39896
Alignment:
Q  130 atttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    |||||||| |||| |||||||||||||||||||||||| ||| ||||    
T  39942 atttggtgtcaacgaatccgttgacacctggtgtcaacggattctga 39896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 800 - 751
Alignment:
Q  127 gagatttggtgccaacaaatccgttgacacctggtgtcaacagatcctga 176  Q
    ||||||||||| |||| |||||||||| ||||||||||||  ||||||||    
T  800 gagatttggtgtcaacgaatccgttgaaacctggtgtcaatggatcctga 751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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