View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5606-Insertion-15 (Length: 302)
Name: NF5606-Insertion-15
Description: NF5606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5606-Insertion-15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 8 - 302
Target Start/End: Original strand, 39447499 - 39447793
Alignment:
| Q |
8 |
agttgcggatgctgcaaataattttacattagcacaaactatgtnnnnnnntagtttgcatgcagatttaattttctaagaatctgggttgttaaaatta |
107 |
Q |
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| T |
39447499 |
agttgcggatgctgcaaataattttacatttgcacaaactatgtaaaaaaatagtttgcatgcagatttaattttctaagaatctgggttgttaaaatta |
39447598 |
T |
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| Q |
108 |
gctgttacaatccatattagatgtaaatattttcgtgtctcaaatttacttcgtacaatcgagattttttatggannnnnnngaattggatagatcaaca |
207 |
Q |
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| T |
39447599 |
gctgttacaatccatattagatgtaaatattttcgtgtctcaaatttacttcgtacaatcgagattttttatggatttttttgaattggatagatcaaca |
39447698 |
T |
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| Q |
208 |
gaaccttttgttatatgttcaagtgtgagattacaatctaatgttggcatgtcattagatttttgatatttgactatattttccaaatgtgtttg |
302 |
Q |
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| T |
39447699 |
gaaccttttgttatatgttcaagtgtgagattacaatctaatgttggcttgtcattagatgtttgatatttgactatattttccaaatgtgtttg |
39447793 |
T |
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