View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5606-Insertion-6 (Length: 792)
Name: NF5606-Insertion-6
Description: NF5606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5606-Insertion-6 |
 | |
|
| [»] scaffold0499 (2 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 301; Significance: 1e-169; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 357 - 790
Target Start/End: Original strand, 54147477 - 54147913
Alignment:
| Q |
357 |
ggtttggcttgattcattgtggttcatattggttcgtcaatttgtctttgcatggttcgtttggttcagtttggtttgatttggattcgctttcaatttg |
456 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
54147477 |
ggtttggcttgattcattgtggttcatattggttcgtcaatttgtctttgcatggttcgtttggttcagtttggtttgatttggattcattttgaatttg |
54147576 |
T |
|
| Q |
457 |
tttggttgttaggtgagtcaagatagtgctcacaattggatattatttgtttggtgggtcaagtgctcataatt----tgtttgtttgatgagtcaggtg |
552 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| | | |||||||||| ||||||||||||| ||| |||||||||| || |||| ||| |
|
|
| T |
54147577 |
tttggttgttaggtgagtcaagatagtcctcacaattggtt--tgtttgtttggtaggtcaagtgctcactattggattgtttgtttggtgggtcaagtg |
54147674 |
T |
|
| Q |
553 |
ctcacactttagttgtttggtgaattaggtgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaa |
652 |
Q |
| |
|
|||| | ||| ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54147675 |
ctcataatttgtttgtttggtgagtcaggtgctcacactttagttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaa |
54147774 |
T |
|
| Q |
653 |
tttggtttc--tcccccttttgattcttttgattgattgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggt |
750 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
54147775 |
tttggtttctttcccccttttgattcttctgattgattgtttggtgggtcgagtgctcataatttggtttcttct-ccccttttgattcttcaagttggt |
54147873 |
T |
|
| Q |
751 |
tgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54147874 |
tgtttggtgagtcgagtgctcacaatttggtttcttctcc |
54147913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 8 - 253
Target Start/End: Original strand, 54147130 - 54147373
Alignment:
| Q |
8 |
tattcaatatggtttgtttcttctttttctcatttaatttgctggtcaaaattagttcctattggttgattagcatgttgcttttttgttttgattggga |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
54147130 |
tattcaatatggtttgtttcttctttttctcatttaatttgctggtcaaaattagttcctattggttgattagcatgttgctttt--gttttgattggga |
54147227 |
T |
|
| Q |
108 |
gaccgataaatttctaatggtgaaggtagtgtacctaagcataaattggttttttggtgcttgggagttagtaggcttcattgttgtgataacatggcat |
207 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54147228 |
gaccgataaatttataatggtgaaggtagtgtacctaagcataaattggttttttagtgcttgggagttagtaggcttcattgttgtgataacatggcat |
54147327 |
T |
|
| Q |
208 |
tggtaactagtcttctcaatgtctgcaaaattgtgttggtctatga |
253 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
54147328 |
tggtaactagtcttctcaatgtctacaaaattgtgttggtctatga |
54147373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 448 - 575
Target Start/End: Original strand, 16870567 - 16870700
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggat------attatttgtttggtgggtcaagtgctcataatttgtttgtttga |
541 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||||| | || |||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
16870567 |
ttcaatttgtttggttgttgggtgagtcaaaatagtgctcacaattggtttgttcatttgtttgtttggtgggtcaagaactcataatttgcttgtttgg |
16870666 |
T |
|
| Q |
542 |
tgagtcaggtgctcacactttagttgtttggtga |
575 |
Q |
| |
|
|||||| | |||||||||| |||||||||||| |
|
|
| T |
16870667 |
tgagtcgatttctcacactttggttgtttggtga |
16870700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 591 - 662
Target Start/End: Original strand, 16870654 - 16870724
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct |
662 |
Q |
| |
|
|||| |||||||||||||| | |||||||| ||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
16870654 |
tttgcttgtttggtgagtcgatttctcacactttggttgtttggtgagcat-gtgctcacaatttggtttct |
16870724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 744 - 790
Target Start/End: Original strand, 16870777 - 16870823
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
16870777 |
atttggttgtttcgtgagtcgagtgctcataatttggtttcttctcc |
16870823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 658
Target Start/End: Original strand, 42265400 - 42265492
Alignment:
| Q |
564 |
gttgtttggtgaattaggtgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggt |
658 |
Q |
| |
|
|||||||||||| | | |||||||| ||||||||||||||||||| ||| |||||| |||||||||||||||| | |||||||||||||||| |
|
|
| T |
42265400 |
gttgtttggtga-tcaagtgctcactgtttggttgtttggtgagtcgagt-ctcacaatttggttgtttggtgattcaagtgctcacaatttggt |
42265492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 742
Target Start/End: Original strand, 54147827 - 54147927
Alignment:
| Q |
643 |
gtgctcacaatttggtttctcc--cccttttgattcttttgattgattgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattct |
740 |
Q |
| |
|
||||||| |||||||||||| | |||||||||||||| ||| |||||||||| || |||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
54147827 |
gtgctcataatttggtttcttctccccttttgattcttcaagttggttgtttggtgagtcgagtgctcacaatttggtttcttct-ccccttttgattct |
54147925 |
T |
|
| Q |
741 |
tc |
742 |
Q |
| |
|
|| |
|
|
| T |
54147926 |
tc |
54147927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 448 - 490
Target Start/End: Original strand, 16870396 - 16870438
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcaca |
490 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
16870396 |
ttcaatttgtttggttgtttggtgagtcaaaatagtgctcaca |
16870438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 685
Target Start/End: Original strand, 54147869 - 54147933
Alignment:
| Q |
623 |
ttggttgtttggtgagtttggtgctcacaatttggtttctcc--cccttttgattcttttgattg |
685 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| | |||||||||||||| |||||| |
|
|
| T |
54147869 |
ttggttgtttggtgagtcgagtgctcacaatttggtttcttctccccttttgattcttctgattg |
54147933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 702 - 742
Target Start/End: Original strand, 16870798 - 16870838
Alignment:
| Q |
702 |
agtgctcataatttggtttcttctcccccttttgattcttc |
742 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
16870798 |
agtgctcataatttggtttcttctccccttttttattcttc |
16870838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 742 - 782
Target Start/End: Original strand, 24225506 - 24225546
Alignment:
| Q |
742 |
caatttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
24225506 |
caatttggttgtttggtgaatcgagtgcttacaatttggtt |
24225546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 703 - 763
Target Start/End: Original strand, 16870705 - 16870766
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttg--attcttcaatttggttgtttggtgagtc |
763 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||| ||||||||||||||||| || ||||||| |
|
|
| T |
16870705 |
gtgctcacaatttggtttcttct-ccccttttgatattcttcaatttggttgattagtgagtc |
16870766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 742 - 781
Target Start/End: Original strand, 42265453 - 42265492
Alignment:
| Q |
742 |
caatttggttgtttggtgagtcgagtgctcacaatttggt |
781 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
42265453 |
caatttggttgtttggtgattcaagtgctcacaatttggt |
42265492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 790
Target Start/End: Original strand, 16870685 - 16870729
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
16870685 |
tttggttgtttggtgag-catgtgctcacaatttggtttcttctcc |
16870729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 782
Target Start/End: Original strand, 42265426 - 42265462
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
42265426 |
tttggttgtttggtgagtcgagt-ctcacaatttggtt |
42265462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 100; Significance: 5e-49; HSPs: 36)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 376 - 597
Target Start/End: Original strand, 21813696 - 21813918
Alignment:
| Q |
376 |
tggttcatattggttcgtcaatttgtctttgcatggttcgtttggttcagtttggtttgatttggattcgct---ttcaatttgtttggttgttaggtga |
472 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||| || |
|
|
| T |
21813696 |
tggttcgtattggttcgtcaatttgtctttgtctggttcgtttgattcagttcggtttgatttggattcggttggttcaatttgtttggttgttaggcga |
21813795 |
T |
|
| Q |
473 |
gtcaagatagtgctcacaattggatattatttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtcaggtgctcacactttagttgtttgg |
572 |
Q |
| |
|
||||||||| | ||||||||||| |||||||||||||| |||||||||||| | |||| ||||||| |||||| ||||||||| ||| |||| |||| |
|
|
| T |
21813796 |
gtcaagatattcctcacaattgg--tttatttgtttggtgagtcaagtgctcacactttggttgtttggtgagtcgagtgctcacaatttggttgcttgg |
21813893 |
T |
|
| Q |
573 |
tgaattaggtgctcacactttggtt |
597 |
Q |
| |
|
|||| || || | |||| ||||||| |
|
|
| T |
21813894 |
tgaaataagtacccacaatttggtt |
21813918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 703 - 782
Target Start/End: Original strand, 44338338 - 44338416
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
44338338 |
gtgctcacaatttggtttcttctcccc-ttttgattcttcaatttggtggtttggtgagtcgagttctcacactttggtt |
44338416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 448 - 597
Target Start/End: Complemental strand, 11828721 - 11828578
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggatattatttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtc |
547 |
Q |
| |
|
||||||||||||| |||| | |||| ||||||||||||||||||| | || ||||||||||||||||||||| |||||| |||| || |||||| |
|
|
| T |
11828721 |
ttcaatttgtttgattgtaggatgagacaagatagtgctcacaatttgtta------gtttggtgggtcaagtgctcacaatttggttgtctggtgagtc |
11828628 |
T |
|
| Q |
548 |
aggtgctcacactttagttgtttggtgaattaggtgctcacactttggtt |
597 |
Q |
| |
|
|||||||||| ||| |||||||||||| ||| || |||||| ||||||| |
|
|
| T |
11828627 |
gggtgctcacattttggttgtttggtgagttaagtactcacaatttggtt |
11828578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 448 - 575
Target Start/End: Complemental strand, 46963974 - 46963841
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggat------attatttgtttggtgggtcaagtgctcataatttgtttgtttga |
541 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||||| | || |||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
46963974 |
ttcaatttgtttggttgttgggtgagtcaaaatagtgctcacaattggtttgttcatttgtttgtttggtgggtcaagaactcataatttgcttgtttgg |
46963875 |
T |
|
| Q |
542 |
tgagtcaggtgctcacactttagttgtttggtga |
575 |
Q |
| |
|
|||||| | |||||||||| |||||||||||| |
|
|
| T |
46963874 |
tgagtcgatttctcacactttggttgtttggtga |
46963841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 687 - 774
Target Start/End: Complemental strand, 15623139 - 15623052
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
|||||||||| || |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
15623139 |
ttgtttggtgagttgagtgctcacaattttgtttcttctccccctactgattcttcaatttggttgtttggtgagtctagttctcaca |
15623052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 591 - 662
Target Start/End: Complemental strand, 15623174 - 15623104
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct |
662 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
15623174 |
tttggttgtttggtgagtctagttctcaca-tttggttgtttggtgagttgagtgctcacaattttgtttct |
15623104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 683 - 774
Target Start/End: Complemental strand, 15623236 - 15623145
Alignment:
| Q |
683 |
ttgattgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
|||||||||||||| || |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
15623236 |
ttgattgtttggtgagttgagtgctcacaattttgtttcttctccccctaccgattcttcaatttggttgtttggtgagtctagttctcaca |
15623145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 560 - 678
Target Start/End: Original strand, 21813819 - 21813940
Alignment:
| Q |
560 |
tttagttgtttggtgaattaggtgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttgg-- |
657 |
Q |
| |
|
|||| ||||||||||| | | ||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||||| | || | |||||||||| |
|
|
| T |
21813819 |
tttatttgtttggtgagtcaagtgctcacactttggttgtttggtgagtcgagtgctcacaatttggttgcttggtgaaataagtacccacaatttggtt |
21813918 |
T |
|
| Q |
658 |
-tttctcccccttttgattctt |
678 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
21813919 |
ttttctcccccttttgattctt |
21813940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 703 - 774
Target Start/End: Original strand, 44338430 - 44338500
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
44338430 |
gtgctcacaatttggtttcttctcccc-ttttgattcttcaatttggttgtttggtgagtagagttctcaca |
44338500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 591 - 678
Target Start/End: Original strand, 44338287 - 44338375
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattctt |
678 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
44338287 |
tttgcttgtttggtgagtcgagttctcacattttggttgtttggtgagcgt-gtgctcacaatttggtttcttctccccttttgattctt |
44338375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 581 - 662
Target Start/End: Complemental strand, 11828656 - 11828575
Alignment:
| Q |
581 |
gtgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct |
662 |
Q |
| |
|
||||||||| ||||||||| ||||||||| || |||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
11828656 |
gtgctcacaatttggttgtctggtgagtcgggtgctcacattttggttgtttggtgagttaagtactcacaatttggtttct |
11828575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 591 - 662
Target Start/End: Complemental strand, 15623267 - 15623197
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct |
662 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||| |
|
|
| T |
15623267 |
tttggttgtttggtgagtctagttctcaca-tttgattgtttggtgagttgagtgctcacaattttgtttct |
15623197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 628
Target Start/End: Complemental strand, 11828688 - 11828578
Alignment:
| Q |
518 |
agtgctcataatttgtttgtttgatgagtcaggtgctcacactttagttgtttggtgaattaggtgctcacactttggttgtttggtgagtctagttctc |
617 |
Q |
| |
|
|||||||| |||||||| ||||| || |||| ||||||||| ||| ||||| |||||| | |||||||||| |||||||||||||||||| ||| ||| |
|
|
| T |
11828688 |
agtgctcacaatttgttagtttggtgggtcaagtgctcacaatttggttgtctggtgagtcgggtgctcacattttggttgtttggtgagttaagtactc |
11828589 |
T |
|
| Q |
618 |
acattttggtt |
628 |
Q |
| |
|
||| ||||||| |
|
|
| T |
11828588 |
acaatttggtt |
11828578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 448 - 575
Target Start/End: Original strand, 44338205 - 44338333
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggat--attatttgtttggtgggtcaagtgctcataatttgtttgtttgatgag |
545 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||| | | | ||||||||||||||| || ||||||||||| ||||||| |||| |
|
|
| T |
44338205 |
ttcaatttgtttggttgttgggtgagtcaaaatagtgctcacaattagtttgttcgtttgtttggtgggtc-agcactcataatttgcttgtttggtgag |
44338303 |
T |
|
| Q |
546 |
tcaggtgctcacactttagttgtttggtga |
575 |
Q |
| |
|
|| || |||||| ||| |||||||||||| |
|
|
| T |
44338304 |
tcgagttctcacattttggttgtttggtga |
44338333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 591 - 678
Target Start/End: Original strand, 44338379 - 44338467
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattctt |
678 |
Q |
| |
|
|||||| |||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
44338379 |
tttggtggtttggtgagtcgagttctcacactttggttgtttggtgagcgt-gtgctcacaatttggtttcttctccccttttgattctt |
44338467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 591 - 667
Target Start/End: Complemental strand, 15623081 - 15623006
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttctccccc |
667 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||| ||||||| |||| |
|
|
| T |
15623081 |
tttggttgtttggtgagtctagttctcaca-tttggttgtttggtgagtcgtgtgctcacgattcggtttcttcccc |
15623006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 591 - 678
Target Start/End: Original strand, 44338471 - 44338560
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggt---ttctcccccttttgattctt |
678 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
44338471 |
tttggttgtttggtgagtagagttctcaca-tttggttgtctggtgagtagtgtgctcacaatttggtttcttctcccccttttgattctt |
44338560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 703 - 751
Target Start/End: Original strand, 44338522 - 44338570
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttgattcttcaatttggtt |
751 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44338522 |
gtgctcacaatttggtttcttctcccccttttgattcttcaatttggtt |
44338570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 409 - 540
Target Start/End: Original strand, 6530511 - 6530643
Alignment:
| Q |
409 |
tggttcgtttggttcagtttggtttgatttggattcgcttt---caatttgtttggttgttaggtgagtcaagatagtgctcacaattggatattatttg |
505 |
Q |
| |
|
|||||| |||||||| ||| |||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||| |||||||||| || | || |
|
|
| T |
6530511 |
tggttcatttggttccgttcagtttgatttggattcgttttgttcaatttgtttgattgttgggtgagtcaagatagtattcacaattgg--tttgtctg |
6530608 |
T |
|
| Q |
506 |
tttggtgggtcaagtgctcataatttgtttgtttg |
540 |
Q |
| |
|
||||||| ||||| || ||| |||||| ||||||| |
|
|
| T |
6530609 |
tttggtgagtcaaatgttcacaatttggttgtttg |
6530643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 689
Target Start/End: Complemental strand, 46963887 - 46963788
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattcttttgattgatt |
688 |
Q |
| |
|
|||| |||||||||||||| | |||||||| ||||||||||||||||| | |||||||||||||||||||| |||||||| |||||| | ||||||| |
|
|
| T |
46963887 |
tttgcttgtttggtgagtcgatttctcacactttggttgtttggtgagcat-gtgctcacaatttggtttcttctcccctttttattcttctcattgatt |
46963789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 706 - 774
Target Start/End: Complemental strand, 15623306 - 15623238
Alignment:
| Q |
706 |
ctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
|||| ||||||||||||||||||| | || ||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
15623306 |
ctcacaatttggtttcttctccccgtactggttcttcaatttggttgtttggtgagtctagttctcaca |
15623238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 744 - 790
Target Start/End: Complemental strand, 15623145 - 15623099
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
15623145 |
atttggttgtttggtgagttgagtgctcacaattttgtttcttctcc |
15623099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 533 - 606
Target Start/End: Original strand, 21813823 - 21813896
Alignment:
| Q |
533 |
tttgtttgatgagtcaggtgctcacactttagttgtttggtgaattaggtgctcacactttggttgtttggtga |
606 |
Q |
| |
|
|||||||| ||||||| ||||||||||||| |||||||||||| | ||||||||| |||||||| ||||||| |
|
|
| T |
21813823 |
tttgtttggtgagtcaagtgctcacactttggttgtttggtgagtcgagtgctcacaatttggttgcttggtga |
21813896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 745 - 782
Target Start/End: Original strand, 21813850 - 21813887
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21813850 |
tttggttgtttggtgagtcgagtgctcacaatttggtt |
21813887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 790
Target Start/End: Complemental strand, 15623238 - 15623192
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
15623238 |
atttgattgtttggtgagttgagtgctcacaattttgtttcttctcc |
15623192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 790
Target Start/End: Original strand, 44338500 - 44338546
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
|||||||||| |||||||| | ||||||||||||||||||||||||| |
|
|
| T |
44338500 |
atttggttgtctggtgagtagtgtgctcacaatttggtttcttctcc |
44338546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 790
Target Start/End: Original strand, 44338318 - 44338362
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
44338318 |
tttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcc |
44338362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 790
Target Start/End: Original strand, 44338410 - 44338454
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
44338410 |
tttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcc |
44338454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 745 - 788
Target Start/End: Complemental strand, 11828615 - 11828572
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttct |
788 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
11828615 |
tttggttgtttggtgagttaagtactcacaatttggtttcttct |
11828572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 787
Target Start/End: Complemental strand, 15623052 - 15623009
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttc |
787 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
15623052 |
atttggttgtttggtgagtcgtgtgctcacgattcggtttcttc |
15623009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 24487524 - 24487454
Alignment:
| Q |
171 |
ggagttagtaggcttcattgttgtgataacatggcattggtaactagtcttctcaatgtctgcaaaattgt |
241 |
Q |
| |
|
|||||||||||||||| |||||||| |||||| ||| ||| ||||||||||| |||||| |||||||| |
|
|
| T |
24487524 |
ggagttagtaggcttctttgttgtggcaacatgatatttgtatctagtcttctcgttgtctgtaaaattgt |
24487454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 689
Target Start/End: Original strand, 26403153 - 26403183
Alignment:
| Q |
659 |
ttctcccccttttgattcttttgattgattg |
689 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
26403153 |
ttctcccccttttgattcttttgattgattg |
26403183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 689
Target Start/End: Original strand, 44338654 - 44338684
Alignment:
| Q |
659 |
ttctcccccttttgattcttttgattgattg |
689 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
44338654 |
ttctcccccttttgattcttttgattgattg |
44338684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 742 - 779
Target Start/End: Complemental strand, 24487125 - 24487088
Alignment:
| Q |
742 |
caatttggttgtttggtgagtcgagtgctcacaatttg |
779 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
24487125 |
caatttggttgtttggtgagtcaagttctcacaatttg |
24487088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 24487600 - 24487555
Alignment:
| Q |
91 |
ttttgttttgattgggagaccgata-aatttctaatggtgaaggta |
135 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||| ||||||||||| |
|
|
| T |
24487600 |
ttttgttttgattgggagaccgatagaatatctagtggtgaaggta |
24487555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 790
Target Start/End: Complemental strand, 46963856 - 46963812
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
46963856 |
tttggttgtttggtgag-catgtgctcacaatttggtttcttctcc |
46963812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 100; Significance: 5e-49; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 376 - 639
Target Start/End: Complemental strand, 1173809 - 1173541
Alignment:
| Q |
376 |
tggttcatattggttcgtcaatttgtctttgcatggttcgtttggttcagtttggtttgatttggattcgctt---tcaatttgtttggttgttaggtga |
472 |
Q |
| |
|
|||||||||| ||||| ||||||||| || || ||| |||||||||| ||| ||||||||||| |||| || | |||||||||||||||||||||| |
|
|
| T |
1173809 |
tggttcatatgggttcatcaatttgttttcgcttggctcgtttggtttggttcagtttgatttggtttcgtttgattaaatttgtttggttgttaggtga |
1173710 |
T |
|
| Q |
473 |
gtcaagatagtgctcacaattggata--ttatttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtcaggtgctcacactttagttgttt |
570 |
Q |
| |
|
||||||||||| |||| |||||| | || ||||||||||||||||||||||||||||||||||||||| || ||| ||||||| | ||| |||||| |
|
|
| T |
1173709 |
gtcaagatagttctcaaaattggtttgtttgtttgtttggtgggtcaagtgctcataatttgtttgtttggtgggtcgagtgctcataatttgtttgttt |
1173610 |
T |
|
| Q |
571 |
ggtgaattaggtgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagt |
639 |
Q |
| |
|
||||| | || |||| | ||||||||||||||||||||||| ||||||| ||| ||||||||||||| |
|
|
| T |
1173609 |
ggtgagtcgagtactcatattttggttgtttggtgagtctagtgctcacatgttgtttgtttggtgagt |
1173541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 448 - 678
Target Start/End: Complemental strand, 38584322 - 38584083
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggatattat---ttgtttggtgggtcaagtgctcataatttgtttgtttgatga |
544 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||| | | | | ||||||||||||| ||| |||| |||||| ||||||| ||| |
|
|
| T |
38584322 |
ttcaatttgtttggttgttgggtgagtcaaaatagtgctcacaatttggtttgttcgtttgtttggtgggt-aagcactcacaatttgcttgtttggtga |
38584224 |
T |
|
| Q |
545 |
gtcaggtgctcacactttagttgtttggt----gaattaggtgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtt |
640 |
Q |
| |
|
||| ||||||||| ||| |||||||||| || | | ||||||||| |||||| ||||||||||| ||| |||||| ||||||||||||||||||| |
|
|
| T |
38584223 |
gtcgagtgctcacattttggttgtttggttggtgagtcaagtgctcacaatttggtagtttggtgagttaagtgctcacaatttggttgtttggtgagtt |
38584124 |
T |
|
| Q |
641 |
tggtgctcacaatttg---gtttctcccccttttgattctt |
678 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
38584123 |
aaatgctcacaatttgattttttctcccccttttgattctt |
38584083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 502 - 678
Target Start/End: Complemental strand, 1173647 - 1173469
Alignment:
| Q |
502 |
tttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtcaggtgctcacactttagttgtttggtgaattaggtgctcacactttggttgttt |
601 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||| || |||| | ||| |||||||||||| | ||||||||| ||| |||||| |
|
|
| T |
1173647 |
tttgtttggtgggtcgagtgctcataatttgtttgtttggtgagtcgagtactcatattttggttgtttggtgagtctagtgctcacatgttgtttgttt |
1173548 |
T |
|
| Q |
602 |
ggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggt---ttctcccccttttgattctt |
678 |
Q |
| |
|
||||||| || |||||| |||||||||||||||||| | |||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
1173547 |
ggtgagt-aagcgctcacactttggttgtttggtgagtctagtgctcacaatttggtttcttctcgcccttttgattctt |
1173469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 687 - 763
Target Start/End: Complemental strand, 1173523 - 1173447
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtc |
763 |
Q |
| |
|
|||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
1173523 |
ttgtttggtgagtctagtgctcacaatttggtttcttctcgcccttttgattcttcaatttggttgtttggtgagtc |
1173447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 687 - 774
Target Start/End: Complemental strand, 1173430 - 1173343
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
|||||||||| || ||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| |
|
|
| T |
1173430 |
ttgtttggtgagtctagtgcacacaatttggtttcttctcccccttttgattattcaatttggttgtttggtgagtctagttctcaca |
1173343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 448 - 575
Target Start/End: Original strand, 8986129 - 8986262
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggat------attatttgtttggtgggtcaagtgctcataatttgtttgtttga |
541 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||||| | || |||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
8986129 |
ttcaatttgtttggttgttgggtgagtcaaaatagtgctcacaattggtttgttcatttgtttgtttggtgggtcaagaactcataatttgcttgtttgg |
8986228 |
T |
|
| Q |
542 |
tgagtcaggtgctcacactttagttgtttggtga |
575 |
Q |
| |
|
|||||| | |||||||||| |||||||||||| |
|
|
| T |
8986229 |
tgagtcgatttctcacactttggttgtttggtga |
8986262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 591 - 688
Target Start/End: Complemental strand, 1173372 - 1173273
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggt---ttctcccccttttgattcttttgattgat |
687 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
1173372 |
tttggttgtttggtgagtctagttctcaca-tttgattgtttagtgagtcgagtgctcacaatttggtttcttctcccccttttgattcttgggattgat |
1173274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 591 - 675
Target Start/End: Complemental strand, 1173465 - 1173379
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggt---ttctcccccttttgatt |
675 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||||||||| | |||| ||||||||||| ||||||||||||||||| |
|
|
| T |
1173465 |
tttggttgtttggtgagtctaattctcacattt-ggttgtttggtgagtctagtgcacacaatttggtttcttctcccccttttgatt |
1173379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 745 - 789
Target Start/End: Complemental strand, 1173528 - 1173484
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctc |
789 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1173528 |
tttggttgtttggtgagtctagtgctcacaatttggtttcttctc |
1173484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 591 - 662
Target Start/End: Original strand, 8986216 - 8986286
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct |
662 |
Q |
| |
|
|||| |||||||||||||| | |||||||| ||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
8986216 |
tttgcttgtttggtgagtcgatttctcacactttggttgtttggtgagcat-gtgctcacaatttggtttct |
8986286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 683 - 741
Target Start/End: Complemental strand, 1173341 - 1173283
Alignment:
| Q |
683 |
ttgattgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattctt |
741 |
Q |
| |
|
|||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1173341 |
ttgattgtttagtgagtcgagtgctcacaatttggtttcttctcccccttttgattctt |
1173283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 744 - 790
Target Start/End: Complemental strand, 1173343 - 1173297
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1173343 |
atttgattgtttagtgagtcgagtgctcacaatttggtttcttctcc |
1173297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 744 - 790
Target Start/End: Complemental strand, 1173436 - 1173390
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
1173436 |
atttggttgtttggtgagtctagtgcacacaatttggtttcttctcc |
1173390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 32290565 - 32290642
Alignment:
| Q |
502 |
tttgtttggtgggtcaagtgctcataatttg----tttgtttgatgagtcaggtgctcacactttagttgtttggtga |
575 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||| |||| || |||| ||||||||| ||| |||||||||||| |
|
|
| T |
32290565 |
tttgtttggtgggtcaagtgctcacaatttggttatttttttggtgggtcaagtgctcacaatttggttgtttggtga |
32290642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 499 - 547
Target Start/End: Original strand, 32290597 - 32290645
Alignment:
| Q |
499 |
ttatttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtc |
547 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||| ||||||| |||||| |
|
|
| T |
32290597 |
ttatttttttggtgggtcaagtgctcacaatttggttgtttggtgagtc |
32290645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 742 - 782
Target Start/End: Complemental strand, 38584242 - 38584202
Alignment:
| Q |
742 |
caatttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
38584242 |
caatttgcttgtttggtgagtcgagtgctcacattttggtt |
38584202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 687 - 742
Target Start/End: Complemental strand, 38584137 - 38584082
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttc |
742 |
Q |
| |
|
|||||||||| || || |||||| |||||| ||| ||||||||||||||||||||| |
|
|
| T |
38584137 |
ttgtttggtgagttaaatgctcacaatttgattttttctcccccttttgattcttc |
38584082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 740 - 782
Target Start/End: Original strand, 32290556 - 32290598
Alignment:
| Q |
740 |
ttcaatttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||||||||||||| |
|
|
| T |
32290556 |
ttcaatttgtttgtttggtgggtcaagtgctcacaatttggtt |
32290598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 90; Significance: 4e-43; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 376 - 575
Target Start/End: Original strand, 9511654 - 9511854
Alignment:
| Q |
376 |
tggttcatattggttcgtcaatttgtctttgcatggttcgtttggttcagtttggtttgatttggattcgct---ttcaatttgtttggttgttaggtga |
472 |
Q |
| |
|
||||| || ||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
9511654 |
tggttaattttgtttcgtcaatttgtctttgcatggttcgtgtggttcagttcggtttgatttggattcgcttggttgaatttgtttggttgttaggtga |
9511753 |
T |
|
| Q |
473 |
gtcaagatagtgctcacaattggatattatttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtcaggtgctcacactttagttgtttgg |
572 |
Q |
| |
|
|| |||||||| ||||||||| | || ||||||||||| ||| |||||||| | || | ||||||| |||||| ||||||||| ||| ||||||||| |
|
|
| T |
9511754 |
gttaagatagtcctcacaattcg--tttgtttgtttggtgagtcgagtgctcacacttcggttgtttggtgagtcgagtgctcacaatttggttgtttgg |
9511851 |
T |
|
| Q |
573 |
tga |
575 |
Q |
| |
|
||| |
|
|
| T |
9511852 |
tga |
9511854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 591 - 774
Target Start/End: Original strand, 24136891 - 24137075
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattcttttgattgatt |
688 |
Q |
| |
|
||||||||||||||||| | | |||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||| ||| || |
|
|
| T |
24136891 |
tttggttgtttggtgagccgacttctcacaatttggttgtttggtgagtcgagtgctcacaattttgtttcttccccccttctgattcttcaatttggtt |
24136990 |
T |
|
| Q |
689 |
gtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
|||||||| || ||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
24136991 |
gtttggtgagtctagttctcacaatttggtttcttctccccc-tttgattcttcaatttggttgtttggtgagtctagttctcaca |
24137075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 687 - 790
Target Start/End: Original strand, 24136927 - 24137029
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcacaatttggtttctt |
786 |
Q |
| |
|
|||||||||| || |||||||| ||||| |||||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
24136927 |
ttgtttggtgagtcgagtgctcacaattttgtttcttc-cccccttctgattcttcaatttggttgtttggtgagtctagttctcacaatttggtttctt |
24137025 |
T |
|
| Q |
787 |
ctcc |
790 |
Q |
| |
|
|||| |
|
|
| T |
24137026 |
ctcc |
24137029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 448 - 575
Target Start/End: Complemental strand, 11335537 - 11335415
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggatattatttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtc |
547 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||||||| |||||||||||||| |||||||||||||| || | |
|
|
| T |
11335537 |
ttcaatttgtttggttgtt-ggtgagtcaagatagtgctcacaattggtt--tgtttgtttggcgggtcaagtgctcacaatttgtttgtttggtggg-- |
11335443 |
T |
|
| Q |
548 |
aggtgctcacactttagttgtttggtga |
575 |
Q |
| |
|
| || |||||||||| |||||||||||| |
|
|
| T |
11335442 |
aagtactcacactttggttgtttggtga |
11335415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 591 - 660
Target Start/End: Original strand, 24137046 - 24137114
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggttt |
660 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
24137046 |
tttggttgtttggtgagtctagttctcaca-tttggttgtttggtgagttgagtgctcacaatttggttt |
24137114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 565 - 679
Target Start/End: Original strand, 9511782 - 9511899
Alignment:
| Q |
565 |
ttgtttggtgaattaggtgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttc--- |
661 |
Q |
| |
|
||||||||||| | |||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||| | ||||||||||| |||| |
|
|
| T |
9511782 |
ttgtttggtgagtcgagtgctcacacttcggttgtttggtgagtcgagtgctcacaatttggttgtttggtgagttaaatactcacaatttgatttctta |
9511881 |
T |
|
| Q |
662 |
tcccccttttgattcttt |
679 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
9511882 |
tcccccttttgattcttt |
9511899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 581 - 688
Target Start/End: Complemental strand, 11335469 - 11335361
Alignment:
| Q |
581 |
gtgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct---cccccttttgattct |
677 |
Q |
| |
|
||||||||| |||| |||||||||| | ||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11335469 |
gtgctcacaatttgtttgtttggtggga--agtactcacactttggttgtttggtgagtcgaatgctcacaatttggtttcttctcccccttttgattct |
11335372 |
T |
|
| Q |
678 |
tttgattgatt |
688 |
Q |
| |
|
||||||||||| |
|
|
| T |
11335371 |
tttgattgatt |
11335361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 745 - 790
Target Start/End: Complemental strand, 11335430 - 11335385
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11335430 |
tttggttgtttggtgagtcgaatgctcacaatttggtttcttctcc |
11335385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 742 - 787
Target Start/End: Original strand, 24136919 - 24136964
Alignment:
| Q |
742 |
caatttggttgtttggtgagtcgagtgctcacaatttggtttcttc |
787 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24136919 |
caatttggttgtttggtgagtcgagtgctcacaattttgtttcttc |
24136964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 730 - 782
Target Start/End: Original strand, 24136876 - 24136928
Alignment:
| Q |
730 |
cttttgattcttcaatttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
24136876 |
cttttgattcttcaatttggttgtttggtgagccgacttctcacaatttggtt |
24136928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 529 - 608
Target Start/End: Original strand, 9511777 - 9511856
Alignment:
| Q |
529 |
tttgtttgtttgatgagtcaggtgctcacactttagttgtttggtgaattaggtgctcacactttggttgtttggtgagt |
608 |
Q |
| |
|
|||||||||||| |||||| |||||||||||| |||||||||||| | ||||||||| |||||||||||||||||| |
|
|
| T |
9511777 |
tttgtttgtttggtgagtcgagtgctcacacttcggttgtttggtgagtcgagtgctcacaatttggttgtttggtgagt |
9511856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 448 - 495
Target Start/End: Original strand, 24136725 - 24136772
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattgg |
495 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
24136725 |
ttcaatttgtttggttgttgggtgagtcaaaatagtgctcacaattgg |
24136772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 591 - 659
Target Start/End: Original strand, 9511777 - 9511845
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtt |
659 |
Q |
| |
|
|||| |||||||||||||| ||| |||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
9511777 |
tttgtttgtttggtgagtcgagtgctcacacttcggttgtttggtgagtcgagtgctcacaatttggtt |
9511845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 744 - 783
Target Start/End: Original strand, 24137075 - 24137114
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggttt |
783 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24137075 |
atttggttgtttggtgagttgagtgctcacaatttggttt |
24137114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 748 - 782
Target Start/End: Original strand, 9511811 - 9511845
Alignment:
| Q |
748 |
ggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
9511811 |
ggttgtttggtgagtcgagtgctcacaatttggtt |
9511845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 687 - 741
Target Start/End: Complemental strand, 11335425 - 11335371
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattctt |
741 |
Q |
| |
|
|||||||||| || | |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
11335425 |
ttgtttggtgagtcgaatgctcacaatttggtttcttctcccccttttgattctt |
11335371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 638
Target Start/End: Original strand, 24136808 - 24136855
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgag |
638 |
Q |
| |
|
|||| ||||| |||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
24136808 |
tttgcttgttgggtgagtcgagttctcacattatggttgtttggtgag |
24136855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 58; Significance: 6e-24; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 591 - 689
Target Start/End: Original strand, 42530736 - 42530835
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattcttttgattgatt |
688 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
42530736 |
tttggttgtttggtgagtcgagttctcacactttggttgtttggtgagcgt-gtgctcacaatttggtttcttctccccttttgattcttctgattgatt |
42530834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 448 - 608
Target Start/End: Original strand, 50295478 - 50295636
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggatattatttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtc |
547 |
Q |
| |
|
||||||||||||||||||| | ||||| ||||||||| ||||||| ||| | ||||||| |||||||||||||||| |||||| |||||| |||||| |
|
|
| T |
50295478 |
ttcaatttgtttggttgttggatgagttgagatagtgcacacaatttgat--tgtttgtttagtgggtcaagtgctcacaatttggttgtttcgtgagtc |
50295575 |
T |
|
| Q |
548 |
aggtgctcacactttagttgtttggtgaattaggtgctcacactttggttgtttggtgagt |
608 |
Q |
| |
|
|||||||||||| |||||||||||| || || ||| |||||| ||||||||||||| |
|
|
| T |
50295576 |
gagtgctcacacttgggttgtttggtgagttgagttctcgtactttgattgtttggtgagt |
50295636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 687 - 774
Target Start/End: Complemental strand, 46692099 - 46692012
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
|||||||||| || |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||| |||||| |
|
|
| T |
46692099 |
ttgtttggtgagtcgagtgctcacaatttggtttcttctctcccttttgattcttcaatttggtggtttggtgagtctagttctcaca |
46692012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 584 - 678
Target Start/End: Complemental strand, 46692141 - 46692045
Alignment:
| Q |
584 |
ctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggt---ttctcccccttttgattctt |
678 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
46692141 |
ctcacaatttggttgtttggtgagtctaattctcaca-tttagttgtttggtgagtcgagtgctcacaatttggtttcttctctcccttttgattctt |
46692045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 530 - 676
Target Start/End: Original strand, 50295527 - 50295677
Alignment:
| Q |
530 |
ttgtttgtttgatgagtcaggtgctcacactttagttgtttggtgaattaggtgctcacactttggttgtttggtgagtctagttctcacattttggttg |
629 |
Q |
| |
|
|||||||||| || |||| ||||||||| ||| ||||||| |||| | |||||||||||| ||||||||||||||| ||||||| | |||| ||| |
|
|
| T |
50295527 |
ttgtttgtttagtgggtcaagtgctcacaatttggttgtttcgtgagtcgagtgctcacacttgggttgtttggtgagttgagttctcgtactttgattg |
50295626 |
T |
|
| Q |
630 |
tttggtgagtttggtgctcacaatttggtttct----cccccttttgattc |
676 |
Q |
| |
|
||||||||||| || |||| |||||||||||| |||||||||||||| |
|
|
| T |
50295627 |
tttggtgagttaagtactcataatttggtttcttctccccccttttgattc |
50295677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 744 - 789
Target Start/End: Complemental strand, 46692105 - 46692060
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctc |
789 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46692105 |
atttagttgtttggtgagtcgagtgctcacaatttggtttcttctc |
46692060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 731 - 782
Target Start/End: Original strand, 42530722 - 42530773
Alignment:
| Q |
731 |
ttttgattcttcaatttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
42530722 |
ttttgattctttaatttggttgtttggtgagtcgagttctcacactttggtt |
42530773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 683 - 739
Target Start/End: Original strand, 50295620 - 50295677
Alignment:
| Q |
683 |
ttgattgtttggtgggtgaagtgctcataatttggtttcttct-cccccttttgattc |
739 |
Q |
| |
|
|||||||||||||| || |||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
50295620 |
ttgattgtttggtgagttaagtactcataatttggtttcttctccccccttttgattc |
50295677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 591 - 662
Target Start/End: Complemental strand, 46692041 - 46691970
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgttt-ggtgagtttggtgctcacaatttggtttct |
662 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||||||||| |
|
|
| T |
46692041 |
tttggtggtttggtgagtctagttctcacattt-ggttgttttggtgagtcgagtgttcacaatttggtttct |
46691970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 519 - 558
Target Start/End: Complemental strand, 2593599 - 2593560
Alignment:
| Q |
519 |
gtgctcataatttgtttgtttgatgagtcaggtgctcaca |
558 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2593599 |
gtgctcataatttgtttgtttgatgagtcaagtgctcaca |
2593560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 790
Target Start/End: Original strand, 42530767 - 42530811
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
42530767 |
tttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcc |
42530811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 744 - 788
Target Start/End: Complemental strand, 46692012 - 46691967
Alignment:
| Q |
744 |
atttggttgttt-ggtgagtcgagtgctcacaatttggtttcttct |
788 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
46692012 |
atttggttgttttggtgagtcgagtgttcacaatttggtttcttct |
46691967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 9e-23; HSPs: 19)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 703 - 782
Target Start/End: Original strand, 20242015 - 20242093
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
20242015 |
gtgctcacaatttggtttcttctcccc-ttttgattcttcaatttggtggtttggtgagtcgagttctcacactttggtt |
20242093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 703 - 782
Target Start/End: Complemental strand, 20251052 - 20250974
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
20251052 |
gtgctcacaatttggtttcttctcccc-ttttgattcttcaatttggtggtttggtgagtcgagttctcacactttggtt |
20250974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 703 - 774
Target Start/End: Original strand, 20242107 - 20242177
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
20242107 |
gtgctcacaatttggtttcttctcccc-ttttgattcttcaatttggttgtttggtgagtagagttctcaca |
20242177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 591 - 678
Target Start/End: Original strand, 20241964 - 20242052
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattctt |
678 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
20241964 |
tttgcttgtttggtgagtcgagttctcacattttggttgtttggtgagcgt-gtgctcacaatttggtttcttctccccttttgattctt |
20242052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 591 - 678
Target Start/End: Complemental strand, 20251103 - 20251015
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattctt |
678 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
20251103 |
tttgcttgtttggtgagtcgagttctcacattttggttgtttggtgagcgt-gtgctcacaatttggtttcttctccccttttgattctt |
20251015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 448 - 575
Target Start/End: Original strand, 20241882 - 20242010
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggat--attatttgtttggtgggtcaagtgctcataatttgtttgtttgatgag |
545 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||| | | | ||||||||||||||| || ||||||||||| ||||||| |||| |
|
|
| T |
20241882 |
ttcaatttgtttggttgttgggtgagtcaaaatagtgctcacaattagtttgttcgtttgtttggtgggtc-agcactcataatttgcttgtttggtgag |
20241980 |
T |
|
| Q |
546 |
tcaggtgctcacactttagttgtttggtga |
575 |
Q |
| |
|
|| || |||||| ||| |||||||||||| |
|
|
| T |
20241981 |
tcgagttctcacattttggttgtttggtga |
20242010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 591 - 678
Target Start/End: Original strand, 20242056 - 20242144
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattctt |
678 |
Q |
| |
|
|||||| |||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
20242056 |
tttggtggtttggtgagtcgagttctcacactttggttgtttggtgagcgt-gtgctcacaatttggtttcttctccccttttgattctt |
20242144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 591 - 678
Target Start/End: Complemental strand, 20251011 - 20250923
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattctt |
678 |
Q |
| |
|
|||||| |||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
20251011 |
tttggtggtttggtgagtcgagttctcacactttggttgtttggtgagcgt-gtgctcacaatttggtttcttctccccttttgattctt |
20250923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 448 - 575
Target Start/End: Complemental strand, 20251185 - 20251057
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggat--attatttgtttggtgggtcaagtgctcataatttgtttgtttgatgag |
545 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||| | | | ||||||||||||||| || ||||||||||| ||||||| |||| |
|
|
| T |
20251185 |
ttcaatttgtttggttgttgggtgagtcaaaatagtgctcacaattagtttgttcgtttgtttggtgggtc-agcactcataatttgcttgtttggtgag |
20251087 |
T |
|
| Q |
546 |
tcaggtgctcacactttagttgtttggtga |
575 |
Q |
| |
|
|| || |||||| ||| |||||||||||| |
|
|
| T |
20251086 |
tcgagttctcacattttggttgtttggtga |
20251057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 591 - 678
Target Start/End: Original strand, 20242148 - 20242237
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggt---ttctcccccttttgattctt |
678 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
| T |
20242148 |
tttggttgtttggtgagtagagttctcaca-tttggttgtctggtgagtagtgtgctcacaatttggtttcttctcccccttttgattctt |
20242237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 703 - 751
Target Start/End: Original strand, 20242199 - 20242247
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttgattcttcaatttggtt |
751 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20242199 |
gtgctcacaatttggtttcttctcccccttttgattcttcaatttggtt |
20242247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 703 - 751
Target Start/End: Complemental strand, 20250960 - 20250913
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttgattcttcaatttggtt |
751 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
20250960 |
gtgctcacaatttggtttcttctcccc-ttttgattcttcaatttggtt |
20250913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 790
Target Start/End: Original strand, 20242177 - 20242223
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
|||||||||| |||||||| | ||||||||||||||||||||||||| |
|
|
| T |
20242177 |
atttggttgtctggtgagtagtgtgctcacaatttggtttcttctcc |
20242223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 790
Target Start/End: Original strand, 20241995 - 20242039
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
20241995 |
tttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcc |
20242039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 790
Target Start/End: Original strand, 20242087 - 20242131
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
20242087 |
tttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcc |
20242131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 790
Target Start/End: Complemental strand, 20250980 - 20250936
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
20250980 |
tttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcc |
20250936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 790
Target Start/End: Complemental strand, 20251072 - 20251028
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
20251072 |
tttggttgtttggtgag-cgtgtgctcacaatttggtttcttctcc |
20251028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 689
Target Start/End: Original strand, 20242331 - 20242361
Alignment:
| Q |
659 |
ttctcccccttttgattcttttgattgattg |
689 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
20242331 |
ttctcccccttttgattcttttgattgattg |
20242361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 689
Target Start/End: Complemental strand, 20250829 - 20250799
Alignment:
| Q |
659 |
ttctcccccttttgattcttttgattgattg |
689 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
20250829 |
ttctcccccttttgattcttttgattgattg |
20250799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 56; Significance: 9e-23; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 687 - 781
Target Start/End: Original strand, 21862276 - 21862371
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctccccc-ttttgattcttcaatttggttgtttggtgagtcgagtgctcacaatttggt |
781 |
Q |
| |
|
|||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | | |||||| |||||| |
|
|
| T |
21862276 |
ttgtttggtgagtcgagtgctcacaatttggtttcttctcccccattttgattcttcaatttggttgtttggtgagtctaattctcacactttggt |
21862371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 682 - 774
Target Start/End: Complemental strand, 28063679 - 28063589
Alignment:
| Q |
682 |
attgattgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
|||| |||||||||| || | ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
28063679 |
attggttgtttggtgagtcaggtgctcacaatttggtttcttctccc--ttttgattcttcaatttggttgtttggtgagtctagttctcaca |
28063589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 702 - 763
Target Start/End: Original strand, 13167536 - 13167597
Alignment:
| Q |
702 |
agtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtc |
763 |
Q |
| |
|
|||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13167536 |
agtgctcacagtttggtttcttctcccccttctgattcttcaatttggttgtttggtgagtc |
13167597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 591 - 662
Target Start/End: Original strand, 21862241 - 21862311
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct |
662 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21862241 |
tttggttgtttggtgagtctagctctcaca-tttggttgtttggtgagtcgagtgctcacaatttggtttct |
21862311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 744 - 790
Target Start/End: Original strand, 21862270 - 21862316
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21862270 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
21862316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 583 - 676
Target Start/End: Original strand, 21862043 - 21862137
Alignment:
| Q |
583 |
gctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattc |
676 |
Q |
| |
|
||||||| |||| |||||||||||||| | ||||||||||||||||||||| |||| | |||||||||||||||||||| ||||||||||||| |
|
|
| T |
21862043 |
gctcacaatttgcttgtttggtgagtcgaattctcacattttggttgtttgttgagcgt-gtgctcacaatttggtttcttctccccttttgattc |
21862137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 703 - 774
Target Start/End: Original strand, 21862102 - 21862173
Alignment:
| Q |
703 |
gtgctcataatttggtttcttctcccccttttgattc-ttcaatttggttgtttggtgagtcgagtgctcaca |
774 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||| |
|
|
| T |
21862102 |
gtgctcacaatttggtttcttctcccc-ttttgattcgttcaatttggttgtttggtgagtctagttctcaca |
21862173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 591 - 661
Target Start/End: Original strand, 21862144 - 21862213
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttc |
661 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
21862144 |
tttggttgtttggtgagtctagttctcaca-tttggttgtttggtgagtcgagtgctcaatatttggtttc |
21862213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 679
Target Start/End: Complemental strand, 28063618 - 28063528
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct---cccccttttgattcttt |
679 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| |||| | ||| ||||||| ||||| ||||||||||||||||| |
|
|
| T |
28063618 |
tttggttgtttggtgagtctagttctcaca-tttggttgtttggtaagttgaattctcccaatttgatttcttcacccccttttgattcttt |
28063528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 678
Target Start/End: Complemental strand, 28063678 - 28063622
Alignment:
| Q |
623 |
ttggttgtttggtgagtttggtgctcacaatttggtttc-tcccccttttgattctt |
678 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| || |||||||||||||| |
|
|
| T |
28063678 |
ttggttgtttggtgagtcaggtgctcacaatttggtttcttctcccttttgattctt |
28063622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 746 - 790
Target Start/End: Complemental strand, 28063678 - 28063634
Alignment:
| Q |
746 |
ttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28063678 |
ttggttgtttggtgagtcaggtgctcacaatttggtttcttctcc |
28063634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 687 - 763
Target Start/End: Original strand, 21862179 - 21862259
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctccccc----ttttgattcttcaatttggttgtttggtgagtc |
763 |
Q |
| |
|
|||||||||| || |||||||| |||||||||| |||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
21862179 |
ttgtttggtgagtcgagtgctcaatatttggtttcctctcccccccccttctgattcttcaatttggttgtttggtgagtc |
21862259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 704 - 762
Target Start/End: Original strand, 13167445 - 13167502
Alignment:
| Q |
704 |
tgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagt |
762 |
Q |
| |
|
|||||| |||||||| |||||||||| ||||| ||||||||||||||||| |||||||| |
|
|
| T |
13167445 |
tgctcacaatttggtgtcttctcccc-ttttggttcttcaatttggttgtgtggtgagt |
13167502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 744 - 790
Target Start/End: Original strand, 21862173 - 21862219
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
21862173 |
atttggttgtttggtgagtcgagtgctcaatatttggtttcctctcc |
21862219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 745 - 785
Target Start/End: Original strand, 10741529 - 10741569
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttct |
785 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
10741529 |
tttggttgttcggtgagtcgagtactcacaatttggtttct |
10741569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 756 - 790
Target Start/End: Original strand, 13167527 - 13167561
Alignment:
| Q |
756 |
ggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13167527 |
ggtgagtcgagtgctcacagtttggtttcttctcc |
13167561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 547
Target Start/End: Original strand, 13167367 - 13167412
Alignment:
| Q |
502 |
tttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtc |
547 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||| |||||| |
|
|
| T |
13167367 |
tttgtttggtgggtcaagtgctcgcaatttgcttgtttggtgagtc |
13167412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 790
Target Start/End: Original strand, 21862082 - 21862126
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
|||||||||||| |||| || ||||||||||||||||||||||||| |
|
|
| T |
21862082 |
tttggttgtttgttgag-cgtgtgctcacaatttggtttcttctcc |
21862126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 454 - 495
Target Start/End: Complemental strand, 28063813 - 28063772
Alignment:
| Q |
454 |
ttgtttggttgttaggtgagtcaagatagtgctcacaattgg |
495 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||| |||| |
|
|
| T |
28063813 |
ttgtttggttgttaggtgagttaagattgtgctcacatttgg |
28063772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 53; Significance: 5e-21; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 448 - 597
Target Start/End: Complemental strand, 2072519 - 2072369
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggat--attatttgtttggtgggtcaagtgctcataatttgtttgtttgatgag |
545 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||| |||||| ||||| | ||| |||| | ||||||| | |||||| |||||| |||||||||||| |
|
|
| T |
2072519 |
ttcaatttgtttagttgttgggtgagtcaagatagggctcaccattggtttgattgtttggtgggtgggtgat-tgctcacaatttgattgtttgatgag |
2072421 |
T |
|
| Q |
546 |
tcaggtgctcacactttagttgtttggtgaattaggtgctcacactttggtt |
597 |
Q |
| |
|
|| ||||||| ||||| |||||||||||| ||| || |||||| ||||||| |
|
|
| T |
2072420 |
tcgagtgctcatactttggttgtttggtgagttatgtactcacaatttggtt |
2072369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 448 - 597
Target Start/End: Complemental strand, 2076049 - 2075899
Alignment:
| Q |
448 |
ttcaatttgtttggttgttaggtgagtcaagatagtgctcacaattggat--attatttgtttggtgggtcaagtgctcataatttgtttgtttgatgag |
545 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||| |||||| ||||| | ||| |||| | ||||||| | |||||| |||||| |||||||| ||| |
|
|
| T |
2076049 |
ttcaatttgtttagttgttgggtgagtcaagatagggctcaccattggtttaattgtttggtgggtgggtgat-tgctcacaatttggttgtttgacgag |
2075951 |
T |
|
| Q |
546 |
tcaggtgctcacactttagttgtttggtgaattaggtgctcacactttggtt |
597 |
Q |
| |
|
|| ||||||| ||||| |||||||||||| ||| || |||||| ||||||| |
|
|
| T |
2075950 |
tcgagtgctcatactttggttgtttggtgagttatgtactcacaatttggtt |
2075899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 687 - 763
Target Start/End: Complemental strand, 15630076 - 15630001
Alignment:
| Q |
687 |
ttgtttggtgggtgaagtgctcataatttggtttcttctcccccttttgattcttcaatttggttgtttggtgagtc |
763 |
Q |
| |
|
|||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
15630076 |
ttgtttggtgagtcgagtgctcacaatttggtttcttctcccc-ttttgattcttcaatttggttgtttagtgagtc |
15630001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 744 - 790
Target Start/End: Complemental strand, 15629990 - 15629944
Alignment:
| Q |
744 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15629990 |
atttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
15629944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 591 - 685
Target Start/End: Complemental strand, 15630019 - 15629924
Alignment:
| Q |
591 |
tttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattcttttgattg |
685 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||| |
|
|
| T |
15630019 |
tttggttgtttagtgagtctaattctcacattt-ggttgtttggtgagtcgagtgctcacaatttggtttcttctccccttatgattcttctgattg |
15629924 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 596 - 678
Target Start/End: Complemental strand, 15630107 - 15630023
Alignment:
| Q |
596 |
ttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttct--cccccttttgattctt |
678 |
Q |
| |
|
|||||||||||||| ||| |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15630107 |
ttgtttggtgagtcgagtgctcacactttggttgtttggtgagtcgagtgctcacaatttggtttcttctccccttttgattctt |
15630023 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 745 - 790
Target Start/End: Complemental strand, 15630081 - 15630036
Alignment:
| Q |
745 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
790 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15630081 |
tttggttgtttggtgagtcgagtgctcacaatttggtttcttctcc |
15630036 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 581 - 654
Target Start/End: Complemental strand, 19825164 - 19825091
Alignment:
| Q |
581 |
gtgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatt |
654 |
Q |
| |
|
||||||||| ||||||||||||| ||||| ||| |||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
19825164 |
gtgctcacaatttggttgtttggcgagtcgagtgctcacaatttggttgtttggtgagttaagtgctcacaatt |
19825091 |
T |
|
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Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 582 - 664
Target Start/End: Complemental strand, 2072446 - 2072364
Alignment:
| Q |
582 |
tgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttctcc |
664 |
Q |
| |
|
|||||||| |||| ||||||| |||||| ||| |||| | ||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
2072446 |
tgctcacaatttgattgtttgatgagtcgagtgctcatactttggttgtttggtgagttatgtactcacaatttggtttctcc |
2072364 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 582 - 664
Target Start/End: Complemental strand, 2075976 - 2075894
Alignment:
| Q |
582 |
tgctcacactttggttgtttggtgagtctagttctcacattttggttgtttggtgagtttggtgctcacaatttggtttctcc |
664 |
Q |
| |
|
|||||||| |||||||||||| ||||| ||| |||| | ||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
2075976 |
tgctcacaatttggttgtttgacgagtcgagtgctcatactttggttgtttggtgagttatgtactcacaatttggtttctcc |
2075894 |
T |
|
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Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 589
Target Start/End: Complemental strand, 19825223 - 19825094
Alignment:
| Q |
461 |
gttgttaggtgagtcaagatagtgctcacaattggata--ttatttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtcaggtgctcaca |
558 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||| | | || |||| |||||| || ||||||||| |||||| ||||||| ||||| ||||||||| |
|
|
| T |
19825223 |
gttgtttggtgagtcaagataatgctcacaatttgtttgtttgtttggttggtgagt-aagtgctcacaatttggttgtttggcgagtcgagtgctcaca |
19825125 |
T |
|
| Q |
559 |
ctttagttgtttggtgaattaggtgctcaca |
589 |
Q |
| |
|
||| |||||||||||| ||| ||||||||| |
|
|
| T |
19825124 |
atttggttgtttggtgagttaagtgctcaca |
19825094 |
T |
|
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Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 742 - 782
Target Start/End: Complemental strand, 19825157 - 19825117
Alignment:
| Q |
742 |
caatttggttgtttggtgagtcgagtgctcacaatttggtt |
782 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19825157 |
caatttggttgtttggcgagtcgagtgctcacaatttggtt |
19825117 |
T |
|
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Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 565 - 628
Target Start/End: Complemental strand, 15630107 - 15630044
Alignment:
| Q |
565 |
ttgtttggtgaattaggtgctcacactttggttgtttggtgagtctagttctcacattttggtt |
628 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||||||| ||| |||||| ||||||| |
|
|
| T |
15630107 |
ttgtttggtgagtcgagtgctcacactttggttgtttggtgagtcgagtgctcacaatttggtt |
15630044 |
T |
|
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Target: scaffold0499 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0499
Description:
Target: scaffold0499; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 602
Target Start/End: Complemental strand, 7329 - 7233
Alignment:
| Q |
503 |
ttgtttggtgggtcaagtgctcataatttgtttgtttgatgagtcaggtgctcacactttagttgtttggtgaattaggtgctcacactttggttgtttg |
602 |
Q |
| |
|
|||||||||| ||| |||||||| || ||| ||||||| |||| || |||||||| ||||||| |||||| | ||||||||||| |||||||||||| |
|
|
| T |
7329 |
ttgtttggtgagtcgagtgctcacaaattgattgtttgttgagacaaatgctcacaatttagtt---tggtgagtcaggtgctcacaatttggttgtttg |
7233 |
T |
|
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Target: scaffold0499; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 775
Target Start/End: Complemental strand, 7333 - 7304
Alignment:
| Q |
746 |
ttggttgtttggtgagtcgagtgctcacaa |
775 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
7333 |
ttggttgtttggtgagtcgagtgctcacaa |
7304 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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