View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5607_low_1 (Length: 528)
Name: NF5607_low_1
Description: NF5607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5607_low_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 19 - 371
Target Start/End: Complemental strand, 13244802 - 13244450
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13244802 |
aaacttccataacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
13244703 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
|||||||| |||| || ||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
13244702 |
taagacggtacatttataatccctcctctagctgatatccatctttcaggcttaaattccaagcaatcatctccccatatttgttgcatccttcccattg |
13244603 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13244602 |
catacaaagaatatatcaactttgtatttggaccaacatgttctccactaggtagtatatcagatttgatagcgcacttgtgctgaaatgccagaggagg |
13244503 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaa |
371 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13244502 |
atatagcctcaaggtttcacatatggctccatgaaggtaaacaagcttatcaa |
13244450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 19 - 378
Target Start/End: Complemental strand, 12964156 - 12963797
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
12964156 |
aaacttccacaacacattagcagcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaatgctatgaactta |
12964057 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||| || || |||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12964056 |
taagatggcacttgtataatttctcctctatttgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
12963957 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| ||||| || ||||||||||| | ||||| | |||||| |
|
|
| T |
12963956 |
catacaaagaatatatcaactttgtatttggactaacatggtctccactaggtaatatatctgatttaattgcacacttgtgttcaaatggtataggagg |
12963857 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaagctcttt |
378 |
Q |
| |
|
| | |||||||| | |||||| || ||||||||||| |||||||||||||||||| |||| |
|
|
| T |
12963856 |
ataaagccttaaagcttcacaaatagctccatgaagataaacaagcttatcaagcccttt |
12963797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 37 - 377
Target Start/End: Complemental strand, 13081128 - 13080788
Alignment:
| Q |
37 |
agctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttgtaagacgggacatgtaca |
136 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||||| ||| ||||| ||||||||||| || ||||||||||| |||||||| || |||| | |
|
|
| T |
13081128 |
agctgcaaccattttcatttgaagaaaactaatatctttcccaagacagcttcttggacctgcattaaacgctatgaacttataagacggcacttgtata |
13081029 |
T |
|
| Q |
137 |
atgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattgcatacaaagaatatatca |
236 |
Q |
| |
|
|| ||||||| | ||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
13081028 |
atttgtcctctatctgatatccatctctcaggcttaaactccaagcaatcctctccccatatttgctccatccttcccattgcatacaaagaatatatta |
13080929 |
T |
|
| Q |
237 |
actttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagccttaaggtttc |
336 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||| | || |||| |||||||||||| ||| |
|
|
| T |
13080928 |
actttgtatttggactaacatggtctccactaggaagtttatccgatttgatagcacacttgtgctgaaatgctacagaaggatatagccttaaggcttc |
13080829 |
T |
|
| Q |
337 |
acatatggctccatgaaggtaaacaagcttatcaagctctt |
377 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
13080828 |
acatatggctccatgaaggtaaactagcttatcaagctctt |
13080788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 19 - 371
Target Start/End: Original strand, 13271497 - 13271849
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
13271497 |
aaacttccataatacagaagctgcaaccattttcatttgaataaagctaatatctttcccaagacagcttctaggacctgcattgaatgctatgaacttg |
13271596 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||| || ||||||| ||| |||| || | ||||||||||| ||||||||||| ||||||||||| | ||||||| |||||||| |||||||||| |
|
|
| T |
13271597 |
taagatggtacatgtataatttgtcctttatctgatatccatctctcaggcttaaactccaagcaatcaccaccccatacatgttccattcttcccattg |
13271696 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || | ||||||||||| | ||||| | |||||| |
|
|
| T |
13271697 |
catacaaagagtatattaactttgtgtttggaccaacatggtgtccactaggtagtatatcagaattaactgcacacttgtgatcaaatggtataggagg |
13271796 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaa |
371 |
Q |
| |
|
| | || || |||||||||||||| ||| |||||||||||| |||||||||| |
|
|
| T |
13271797 |
ataaagtctcaaggtttcacatatagctgcatgaaggtaaatcagcttatcaa |
13271849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 19 - 379
Target Start/End: Complemental strand, 19279449 - 19279089
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
|||||||||||| | || ||||||||||||||||||||||| || |||||||||| || | ||| ||||| ||||||||||| || |||||||||||| |
|
|
| T |
19279449 |
aaacttccataatacagcagctgcaaccattttcatttgaaggaaagtaatatcttttccgagacagcttctcggacctgcattaaacgctatgaacttg |
19279350 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
|| || || ||||||| ||| ||||||| ||||||||||||| |||||| |||||| | |||||| || |||||||||||||||||||||||||||| |
|
|
| T |
19279349 |
tacgatggtacatgtataatttgtcctctatccgatatccatctctcaggccgaaattctaggcaatcatcaccccatatttgttccatccttcccattg |
19279250 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
|||||||||| ||||| |||||||||||| ||| |||||||| |||||||||||||||||| || || | ||||||||||| | ||||| | ||| || |
|
|
| T |
19279249 |
catacaaagagtatattaactttgtatttagactaacatggtctccactaggtagtatatcggaattaactgcacacttgtgttcaaatggtacaggtgg |
19279150 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaagctctttc |
379 |
Q |
| |
|
| | |||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
19279149 |
ataaagccttaaggcttcacatatagctccatgaagataaactagcttatcaagctctttc |
19279089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 19 - 374
Target Start/End: Original strand, 13086018 - 13086373
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| || |||||||||||| |
|
|
| T |
13086018 |
aaacttccataacatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaagacaacttcgaggacctgcattaaatgctatgaacttg |
13086117 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
|||| || ||||| | ||| |||| || | ||||||||||| || ||||||||||| |||| ||| | ||||||||||||| |||||||||||||| |
|
|
| T |
13086118 |
caagatggtacatgcaaaatatgtcctttatctgatatccatctctcgggcttaaattcgaagcgatccttaccccatatttgtttcatccttcccattg |
13086217 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||| ||||| | |||||||||||||||||||| |||||| ||||||||||||||||||| | |||||| |
|
|
| T |
13086218 |
catacaaagagtatattaacttagtatttggtttaacataatctccactaggtagtatatcagctttgattgcacacttgtgctgaaatggtacaggagg |
13086317 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaagct |
374 |
Q |
| |
|
| | ||||| || | ||||||||| |||||||||||||| || || |||| ||||| |
|
|
| T |
13086318 |
ataaagcctcaatgcttcacatatagctccatgaaggtacactagtttattaagct |
13086373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 19 - 372
Target Start/End: Original strand, 13094310 - 13094663
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
|||||||| |||||||| |||||| ||||| |||||||||| || ||||||||||| || |||||| |||| || |||| |||||||||||||||||| |
|
|
| T |
13094310 |
aaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaatatctttacctatacaaattctgggtcctgtgttgaaagctatgaacttg |
13094409 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||| || ||||||| ||| |||| || | ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
13094410 |
taagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatag |
13094509 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
||||||||| || || || ||||||||||| |||||||| ||||||||||||||||||||||||||| ||||| | |||| ||| | | |||||| |
|
|
| T |
13094510 |
aatacaaagagtaaattaaagttgtatttggagtaacatggtatccactaggtagtatatcagatttgattgcacagatatgctcaaaaggtacaggagg |
13094609 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
372 |
Q |
| |
|
| | |||||||||||||||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13094610 |
ataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaag |
13094663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 19 - 293
Target Start/End: Complemental strand, 30368389 - 30368115
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
||||||||||||||| | |||||||||||| ||||||||||| || |||| |||||| || |||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
30368389 |
aaacttccataacaaggcagctgcaaccatcttcatttgaacgaaactaagatctttacccatacaacttctaggtcctgtattgaaagctatgaacttg |
30368290 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||| || ||||||| |||| |||||| | |||| |||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
30368289 |
taagatggtacatgtataatgtgtcctctctctgatacccatctctcaggcttaaattccatgcaatcttctccccatattttttccatccttcccatag |
30368190 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcac |
293 |
Q |
| |
|
|||||||||| || || ||||| |||||||||| ||||| | ||||||||||||||||||||||||||| |||| |
|
|
| T |
30368189 |
catacaaagagtaaattaacttggtatttggactaacattctctccactaggtagtatatcagatttgattgcac |
30368115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 19 - 372
Target Start/End: Original strand, 13129739 - 13130092
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
||||||| |||||||| |||||| ||||| |||||||||| || |||| |||||| || |||||| |||| || |||| |||||||||| ||||||| |
|
|
| T |
13129739 |
aaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagctacgaacttg |
13129838 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||| || ||||||| ||| |||| || | ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
13129839 |
taagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatag |
13129938 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
||||||||| || ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||| | ||| | |||| ||| | | |||||| |
|
|
| T |
13129939 |
aatacaaagagtaaatcaaagttgtatttggactaacatggtatccactaggtagtatatcagatttgattgaacagatatgctcaaaaggtataggagg |
13130038 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
372 |
Q |
| |
|
| | |||||||||||||||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13130039 |
ataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaag |
13130092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 28 - 372
Target Start/End: Original strand, 13204379 - 13204723
Alignment:
| Q |
28 |
taacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttgtaagacggg |
127 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||| || |||| |||||| || | ||||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
13204379 |
taacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctaggacctgtattgaaagctatgaacttgtaagatggt |
13204478 |
T |
|
| Q |
128 |
acatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattgcatacaaag |
227 |
Q |
| |
|
||||||| |||| |||| | | |||| |||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
13204479 |
acatgtataatgtgtcctgtctctgatacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatagcgtacaaag |
13204578 |
T |
|
| Q |
228 |
aatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagcct |
327 |
Q |
| |
|
| || | ||| |||||||||||| |||| | | |||||||||||||||||| |||||||| ||||| | |||| ||| | | ||||||| | || || |
|
|
| T |
13204579 |
agtacaataaccttgtatttggactaacacgctctccactaggtagtatatcggatttgattgcacatatatgctcaaaaggtacaggaggataaagtct |
13204678 |
T |
|
| Q |
328 |
taaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
372 |
Q |
| |
|
|||| ||||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
13204679 |
caaggcttcacatatagctccatgaaggtacactagcttatcaag |
13204723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 19 - 372
Target Start/End: Complemental strand, 13070457 - 13070104
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
||||||| |||||||| |||||| ||||| |||||||||| || |||| |||||| || | ||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
13070457 |
aaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaaacaacttctcggacctgtattgaaagctatgaacttg |
13070358 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||| || ||||||| |||| |||| | | |||| |||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
13070357 |
taagatggaacatgtataatgtgtcctgtctctgatacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatag |
13070258 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
| |||||||| || | ||| |||||||||||| |||| | | |||||||||||||||||| |||||||| ||||| | |||| ||| | | |||||| |
|
|
| T |
13070257 |
cgtacaaagagtacaataaccttgtatttggactaacacgctctccactaggtagtatatcggatttgattgcacatatatgctcaaaaggtacaggagg |
13070158 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
372 |
Q |
| |
|
| | || || |||||||||||||| |||||||||||||| || || |||||||| |
|
|
| T |
13070157 |
ataaagtctcaaggtttcacatatagctccatgaaggtacactagattatcaag |
13070104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 19 - 372
Target Start/End: Original strand, 13100912 - 13101264
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
||||||| |||||||| |||||| ||||| |||||||||| ||||||||||| || || |||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
13100912 |
aaacttcggtaacaaagcagctgcgaccatcttcatttgaatgaagctaatatccttacccatacaacttctaggtcctg-attgaaagctatgaacttg |
13101010 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||| || ||||||| |||| |||||| | || | |||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
13101011 |
taagatggtacatgtataatgtgtcctctctctgacacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatag |
13101110 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
| |||||||| || | ||| |||||||||||| || | | | ||||||||| |||||||| |||||||| | ||| | |||| ||| | | |||||| |
|
|
| T |
13101111 |
cgtacaaagagtacaataaccttgtatttggactaaaacgctctccactaggaagtatatcggatttgattgaacatatatgctcaaaaggtacaggagg |
13101210 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
372 |
Q |
| |
|
| | ||||| |||||||||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13101211 |
ataaagcctcaaggtttcacatatagctccatggaggtacactagcttatcaag |
13101264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 28 - 372
Target Start/End: Original strand, 13007120 - 13007464
Alignment:
| Q |
28 |
taacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttgtaagacggg |
127 |
Q |
| |
|
|||||||| ||||| ||||| |||||||||| ||||||||||| || || ||||||||||||||||||| |||||||||||||||||||||||| || |
|
|
| T |
13007120 |
taacaaagctgctgcgaccatcttcatttgaatgaagctaatatccttgcccatacaacttctaggacctgtattgaaagctatgaacttgtaagatggt |
13007219 |
T |
|
| Q |
128 |
acatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattgcatacaaag |
227 |
Q |
| |
|
||||||| |||| |||||| | || | |||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
13007220 |
acatgtataatgtgtcctctctctgacacccatctctcaggcttaaattccatgcagtcttctccccatatttgttccatccttcccatagcgtacaaag |
13007319 |
T |
|
| Q |
228 |
aatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagcct |
327 |
Q |
| |
|
| || | ||| |||||||||||| |||| | | |||||||||||||||||| || ||||| ||||| | |||| ||| | | ||||||| | ||||| |
|
|
| T |
13007320 |
agtacaataaccttgtatttggactaacacgctctccactaggtagtatatcggaattgattgcacagatatgctcaaaaggtacaggaggataaagcct |
13007419 |
T |
|
| Q |
328 |
taaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
372 |
Q |
| |
|
| || |||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13007420 |
catggcttcacatagagctccatggaggtacactagcttatcaag |
13007464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 372
Target Start/End: Original strand, 13161432 - 13161785
Alignment:
| Q |
19 |
aaacttccataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
|||||||| |||||||| |||||| ||||| |||||||||| || |||| |||||| || |||||| |||| || |||| ||||||| |||||||||| |
|
|
| T |
13161432 |
aaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtcctgtgttgaaagatatgaacttg |
13161531 |
T |
|
| Q |
119 |
taagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||| || ||||||| ||| |||| || | ||||||||||| |||||||||||||||| ||| ||||| ||||||| |||||||||||| ||||| | |
|
|
| T |
13161532 |
taagaaggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttccccccatagttgttccatcctgcccatag |
13161631 |
T |
|
| Q |
219 |
catacaaagaatatatcaactttgtatttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggagg |
318 |
Q |
| |
|
||||| ||| || || || |||||||||||| || | | | |||||||||||||||||| |||||||| ||||| | |||| ||| | | ||| || |
|
|
| T |
13161632 |
aatacatagagtacattaaacttgtatttggactaatacgttctccactaggtagtatatcggatttgattgcacagatatgctcaaaaggtataggtgg |
13161731 |
T |
|
| Q |
319 |
aaatagccttaaggtttcacatatggctccatgaaggtaaacaagcttatcaag |
372 |
Q |
| |
|
| | |||||||||||||||||||| |||||||| ||||| || ||||||||||| |
|
|
| T |
13161732 |
ataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaag |
13161785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 376 - 520
Target Start/End: Complemental strand, 13244251 - 13244107
Alignment:
| Q |
376 |
tttccctctttcccaatccttctttcattagttcttttagcaggcaataacgagattcatctacatcttcatttcctttgtactcagttatacatttgtc |
475 |
Q |
| |
|
|||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
13244251 |
tttccccctttcccaatctttccttcattagttcttttagcaggcaataacgagattcatctacatcttcatttcctttgtaatcagttatacatttctc |
13244152 |
T |
|
| Q |
476 |
caagaagtggtgaagattttcttttgctgccttgcccttcatctc |
520 |
Q |
| |
|
|||||| ||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
13244151 |
caagaattggtgaagattttctctagctgccttgcccttcttctc |
13244107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 45 - 374
Target Start/End: Complemental strand, 13065468 - 13065139
Alignment:
| Q |
45 |
ccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttgtaagacgggacatgtacaatgcctcc |
144 |
Q |
| |
|
|||| ||||||| ||| ||| | |||||||| || | ||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||| ||| |
|
|
| T |
13065468 |
ccatcttcatttcaacgaaggtgatatctttacccaaacaacttcttggccctgcattgaaagctatgaacttgtaagacggtacatgtataatttgtcc |
13065369 |
T |
|
| Q |
145 |
tctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattgcatacaaagaatatatcaactttgta |
244 |
Q |
| |
|
|| ||||||||||| |||||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||| | |||| | | ||||| |
|
|
| T |
13065368 |
gctttttgatatccatctctcaggcttaaattccatgcagtcttctccccatattttctccatccttcccattgaatacaaatagtataatatccttgta |
13065269 |
T |
|
| Q |
245 |
tttggaccaacatggtgtccactaggtagtatatcagatttgatagcacacttgtgctgaaatgccagaggaggaaatagccttaaggtttcacatatgg |
344 |
Q |
| |
|
||||||| |||||| ||||||||| |||||||||| |||||| ||| |||| |||| | | | ||||||| | |||||||||| ||||||||| | |
|
|
| T |
13065268 |
tttggacttacatggactccactaggaagtatatcagctttgattgcaaacttttgctcgataggtacaggaggataaagccttaaggcttcacatatag |
13065169 |
T |
|
| Q |
345 |
ctccatgaaggtaaacaagcttatcaagct |
374 |
Q |
| |
|
|||| || ||||||| || |||||||||| |
|
|
| T |
13065168 |
ctccgtggaggtaaattagtttatcaagct |
13065139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 376 - 445
Target Start/End: Complemental strand, 12963644 - 12963575
Alignment:
| Q |
376 |
tttccctctttcccaatccttctttcattagttcttttagcaggcaataacgagattcatctacatcttc |
445 |
Q |
| |
|
|||||| ||||||||||||||| |||||||| ||||||||||||||| || |||||||||| || ||||| |
|
|
| T |
12963644 |
tttccccctttcccaatccttccttcattagatcttttagcaggcaagaatgagattcatccacgtcttc |
12963575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 450
Target Start/End: Complemental strand, 19278894 - 19278827
Alignment:
| Q |
383 |
ctttcccaatccttctttcattagttcttttagcaggcaataacgagattcatctacatcttcatttc |
450 |
Q |
| |
|
||||||||||| ||| |||||||||||||||| |||||||||| |||||||||| | |||||||||| |
|
|
| T |
19278894 |
ctttcccaatctttccttcattagttcttttaccaggcaataatgagattcatccgcgtcttcatttc |
19278827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 13895938 - 13895999
Alignment:
| Q |
157 |
ccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||||||| ||||| || ||||||||||||| ||||||||| | |||||| |||||||||| |
|
|
| T |
13895938 |
ccatctttctggcttgaactccaagcaatcttttccccatatgttttccattcttcccattg |
13895999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 441 - 520
Target Start/End: Complemental strand, 19278809 - 19278730
Alignment:
| Q |
441 |
tcttcatttcctttgtactcagttatacatttgtccaagaagtggtgaagattttcttttgctgccttgcccttcatctc |
520 |
Q |
| |
|
||||||| |||||||| | || ||||||||||| |||||| | ||||||||||||||| ||| || |||||||| |||| |
|
|
| T |
19278809 |
tcttcatcacctttgtaataagatatacatttgttcaagaattcgtgaagattttctttagctaccgtgcccttcttctc |
19278730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 13888766 - 13888705
Alignment:
| Q |
157 |
ccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||||||| ||||| || ||||||||||||| ||||||||| |||||| |||||||||| |
|
|
| T |
13888766 |
ccatctttctggcttgaactccaagcaatcttttccccatatgctttccattcttcccattg |
13888705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 341942 - 341825
Alignment:
| Q |
112 |
gaacttgtaagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatcctt |
211 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||| | || ||||| || || |||||||| ||||||||||||| |||||| || | ||| |||| |
|
|
| T |
341942 |
gaacttgtaagacggcgcataaacaatgcctcctctctcagaaatccacctctctggcttaaactccaagcaatcttttccccaaatattttcatccctt |
341843 |
T |
|
| Q |
212 |
cccattgcatacaaagaa |
229 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
341842 |
cccattgcatacaaagaa |
341825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 377658 - 377541
Alignment:
| Q |
112 |
gaacttgtaagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccatcctt |
211 |
Q |
| |
|
|||||| |||||||| |||| ||||||| ||||| | ||||||||||| || ||||| || ||||||||||||||||||||||| | ||| | || |
|
|
| T |
377658 |
gaacttataagacggttcatgaacaatgctacctctctcagatatccatctctctggcttgaactccaagcaatcttctccccatatctcttcaaatctc |
377559 |
T |
|
| Q |
212 |
cccattgcatacaaagaa |
229 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
377558 |
cccattgaatacaaagaa |
377541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 31380344 - 31380253
Alignment:
| Q |
27 |
ataacaaagaagctgcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttg |
118 |
Q |
| |
|
||||||||||||| ||| ||| || ||||||| || |||| |||||| ||||||||||||| || |||| |||||||| |||||||||| |
|
|
| T |
31380344 |
ataacaaagaagccgcagacatcttaatttgaatgaaactaagatctttaccaatacaacttccgggtcctgtattgaaagatatgaacttg |
31380253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 346845 - 346930
Alignment:
| Q |
113 |
aacttgtaagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatat |
198 |
Q |
| |
|
||||||||||| || ||| |||||||||||||| | ||||||||||| || ||||| || ||||| ||||||| ||||||||| |
|
|
| T |
346845 |
aacttgtaagatggtgtatgaacaatgcctcctctctcagatatccatctctctggcttgaactccaaacaatcttttccccatat |
346930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 355504 - 355589
Alignment:
| Q |
113 |
aacttgtaagacgggacatgtacaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatat |
198 |
Q |
| |
|
||||||||||| || ||| |||||||||||||| | ||||||||||| || ||||| || ||||| ||||||| ||||||||| |
|
|
| T |
355504 |
aacttgtaagatggtgtatgaacaatgcctcctctctcagatatccatctctctggcttgaactccaaacaatcttttccccatat |
355589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 337882 - 337787
Alignment:
| Q |
134 |
acaatgcctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatatttgttccat-ccttcccattgcatacaaagaa |
229 |
Q |
| |
|
|||||||||||||| | || ||||| || || ||||| || |||||||||||||||||||| || | || ||| ||||||||||| |||||||||| |
|
|
| T |
337882 |
acaatgcctcctctctcagaaatccacctctctggcttgaactccaagcaatcttctccccaaatat-ttgcatcccttcccattgaatacaaagaa |
337787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 12164206 - 12164365
Alignment:
| Q |
41 |
gcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctaggacctgcattgaaagctatgaacttgtaagacgggacatgtacaatgc |
140 |
Q |
| |
|
|||||||||||||| | || ||||| ||||| || || | |||||| || || || ||||| ||||| |||||||||||||| || |||| || || | |
|
|
| T |
12164206 |
gcaaccattttcatctcaatgaagcttatatccttacccaaacaactccttggtccagcattaaaagcaatgaacttgtaagaaggaacataaactatcc |
12164305 |
T |
|
| Q |
141 |
ctcctctaaccgatatccatctttcaggcttaaattccaagcaatcttctccccatattt |
200 |
Q |
| |
|
||||| | || ||||| || || |||||||||||||||||||||||||||||||||| |
|
|
| T |
12164306 |
ctcctttttgagaaatccacctctctggcttaaattccaagcaatcttctccccatattt |
12164365 |
T |
|
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Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 36668187 - 36668235
Alignment:
| Q |
170 |
ttaaattccaagcaatcttctccccatatttgttccatccttcccattg |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||| |||| |
|
|
| T |
36668187 |
ttaaattccaagcaatcttctccccatatttcctccacccttccaattg |
36668235 |
T |
|
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Target: chr5 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 29669336 - 29669296
Alignment:
| Q |
170 |
ttaaattccaagcaatcttctccccatatttgttccatcct |
210 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
29669336 |
ttaaattccaagcaatcttccccccatattttctccatcct |
29669296 |
T |
|
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