View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5610-Insertion-6 (Length: 453)
Name: NF5610-Insertion-6
Description: NF5610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5610-Insertion-6 |
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Alignment Details
Target: chr6 (Bit Score: 163; Significance: 7e-87; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 109 - 371
Target Start/End: Complemental strand, 32151779 - 32151518
Alignment:
| Q |
109 |
ggagaatgattaatttactattaataacggtgacacaattttttattttacaactgtctcgtatgaaagttttaagttatctcttaaaatttataaagtc |
208 |
Q |
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| T |
32151779 |
ggagaatgatgaatt-attattaatagcggtgacactaatttctattttacaaccgtctcgtatgaaagatataagttatctcttaatatttataaagtc |
32151681 |
T |
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| Q |
209 |
agacttttatcgttgaatcaagtactcatgaactatgttctttgtttgttattgttacttggatagttaatttaaaattcaaataannnnnnnncatttg |
308 |
Q |
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| T |
32151680 |
aaacttttatcgttgaattatgtactcatgaactatgttctttgtttgttattgttacttggatagttaatttaaaattcaaatattgttttttcatttg |
32151581 |
T |
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| Q |
309 |
atttgattaaaaatgttcctcctctttctcctttgaaatataaagttattgctatctagtatg |
371 |
Q |
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| T |
32151580 |
atttgattaaaaatgttcctcctctttttcctttgaaatataaagttattgtaatctagtatg |
32151518 |
T |
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