View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5610-Insertion-8 (Length: 208)
Name: NF5610-Insertion-8
Description: NF5610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5610-Insertion-8 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 15562934 - 15563135
Alignment:
| Q |
7 |
ataaggaatatgtctttcgtgatctctatgaatttaggtattctatggacaatactaggtaattgtcgaaataat-aatcataaataattgtttctcgat |
105 |
Q |
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| T |
15562934 |
ataaggaatatgtctttcgtgatctctatgaatttaggtattctatggacaatactaggtaattgtcgaaataattaatca-aatgaattgtttctcgat |
15563032 |
T |
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| Q |
106 |
tgttatatacacttaatttgtaagataattctcaaattggaaacttgatgtttgattgctttattctgtggaagtgaaggttaaaagttatattctacat |
205 |
Q |
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| T |
15563033 |
tgttatatgcacttaatttgtaagataattctcaaattggaaacttgatgtttgattgctttattctgtggaagtgaaggttaaaagttatattctacat |
15563132 |
T |
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| Q |
206 |
cca |
208 |
Q |
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| T |
15563133 |
cca |
15563135 |
T |
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