View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5614-Insertion-5 (Length: 813)

Name: NF5614-Insertion-5
Description: NF5614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5614-Insertion-5
NF5614-Insertion-5
[»] chr3 (45 HSPs)
chr3 (211-813)||(37359186-37359792)
chr3 (6-145)||(37359859-37359998)
chr3 (461-536)||(46725658-46725733)
chr3 (92-145)||(4577629-4577682)
chr3 (457-521)||(40614292-40614356)
chr3 (457-536)||(29612021-29612100)
chr3 (461-535)||(9342683-9342757)
chr3 (94-142)||(8433437-8433485)
chr3 (93-145)||(19914040-19914092)
chr3 (457-536)||(20821304-20821383)
chr3 (457-536)||(45757930-45758008)
chr3 (93-144)||(9251857-9251908)
chr3 (461-536)||(24313552-24313627)
chr3 (94-145)||(52024787-52024838)
chr3 (478-536)||(48551041-48551099)
chr3 (457-536)||(22853927-22854003)
chr3 (483-536)||(28691976-28692029)
chr3 (97-145)||(35749269-35749317)
chr3 (94-142)||(45636040-45636088)
chr3 (92-132)||(54262894-54262934)
chr3 (94-141)||(8965915-8965962)
chr3 (93-140)||(29491662-29491709)
chr3 (457-536)||(54911202-54911280)
chr3 (461-527)||(37388417-37388482)
chr3 (93-142)||(4521628-4521676)
chr3 (94-139)||(29806017-29806062)
chr3 (94-139)||(46671337-46671382)
chr3 (457-525)||(22772872-22772940)
chr3 (96-140)||(40477759-40477803)
chr3 (88-140)||(43745708-43745760)
chr3 (94-142)||(50030110-50030158)
chr3 (94-138)||(50412435-50412479)
chr3 (457-536)||(3027011-3027090)
chr3 (93-140)||(42622210-42622257)
chr3 (95-142)||(47175468-47175514)
chr3 (478-536)||(12140146-12140204)
chr3 (473-515)||(25061992-25062034)
chr3 (92-142)||(26885330-26885380)
chr3 (93-139)||(32636625-32636671)
chr3 (94-139)||(1020975-1021020)
chr3 (98-139)||(5528704-5528745)
chr3 (89-142)||(9506898-9506951)
chr3 (89-142)||(9514873-9514926)
chr3 (463-536)||(12908850-12908923)
chr3 (92-133)||(51756458-51756499)
[»] chr1 (49 HSPs)
chr1 (457-536)||(31807806-31807885)
chr1 (457-536)||(4040894-4040972)
chr1 (457-536)||(31043002-31043080)
chr1 (457-536)||(40053294-40053372)
chr1 (457-536)||(39973893-39973971)
chr1 (97-142)||(24511591-24511636)
chr1 (96-145)||(25082105-25082154)
chr1 (478-531)||(51904616-51904669)
chr1 (94-142)||(31401361-31401409)
chr1 (457-536)||(39807521-39807603)
chr1 (93-141)||(46707705-46707753)
chr1 (458-521)||(8791467-8791530)
chr1 (457-536)||(27934755-27934834)
chr1 (473-536)||(42573811-42573874)
chr1 (458-536)||(759254-759332)
chr1 (457-526)||(48913-48981)
chr1 (457-536)||(37188555-37188627)
chr1 (458-526)||(290602-290669)
chr1 (84-140)||(7489310-7489366)
chr1 (94-142)||(26308561-26308609)
chr1 (461-529)||(32787286-32787354)
chr1 (482-530)||(34833738-34833786)
chr1 (94-141)||(44382376-44382423)
chr1 (473-536)||(48947205-48947268)
chr1 (92-142)||(14077327-14077376)
chr1 (93-139)||(17554179-17554225)
chr1 (94-140)||(31075971-31076017)
chr1 (92-138)||(32145031-32145077)
chr1 (93-142)||(5360561-5360609)
chr1 (93-142)||(33081987-33082035)
chr1 (97-138)||(34101068-34101109)
chr1 (94-135)||(45809447-45809488)
chr1 (462-530)||(1656443-1656511)
chr1 (87-139)||(32710106-32710158)
chr1 (94-142)||(44978869-44978916)
chr1 (93-141)||(51056196-51056244)
chr1 (457-536)||(16113920-16113998)
chr1 (473-536)||(34861254-34861317)
chr1 (96-138)||(17525438-17525480)
chr1 (467-529)||(24075107-24075169)
chr1 (92-138)||(35912995-35913040)
chr1 (94-140)||(48977237-48977283)
chr1 (94-140)||(51787829-51787875)
chr1 (94-139)||(477796-477841)
chr1 (94-139)||(6526790-6526835)
chr1 (98-139)||(24245839-24245880)
chr1 (457-526)||(33791766-33791834)
chr1 (93-142)||(34256452-34256500)
chr1 (97-142)||(52365928-52365973)
[»] chr4 (47 HSPs)
chr4 (457-530)||(35153258-35153331)
chr4 (457-536)||(38682016-38682095)
chr4 (92-145)||(27736938-27736991)
chr4 (461-536)||(49622976-49623051)
chr4 (92-145)||(33491951-33492004)
chr4 (457-536)||(32175434-32175511)
chr4 (93-145)||(50187503-50187555)
chr4 (457-536)||(3179033-3179112)
chr4 (97-145)||(46663335-46663383)
chr4 (94-142)||(51944435-51944483)
chr4 (478-541)||(45743311-45743374)
chr4 (461-536)||(46570555-46570630)
chr4 (84-139)||(48647383-48647438)
chr4 (478-536)||(40252657-40252715)
chr4 (478-536)||(49951737-49951795)
chr4 (457-526)||(23614627-23614695)
chr4 (94-138)||(43959346-43959390)
chr4 (456-542)||(10505916-10506005)
chr4 (457-536)||(21687612-21687691)
chr4 (457-536)||(53261559-53261637)
chr4 (92-142)||(28967561-28967611)
chr4 (478-536)||(40173525-40173583)
chr4 (100-142)||(42881387-42881429)
chr4 (94-140)||(53936873-53936919)
chr4 (73-142)||(36569627-36569696)
chr4 (473-526)||(52650732-52650785)
chr4 (86-138)||(126574-126626)
chr4 (94-142)||(17370635-17370682)
chr4 (478-526)||(22889271-22889319)
chr4 (478-526)||(22940935-22940983)
chr4 (473-537)||(23136549-23136613)
chr4 (94-142)||(48207078-48207125)
chr4 (84-139)||(12356775-12356830)
chr4 (92-139)||(27761762-27761809)
chr4 (457-536)||(36876084-36876162)
chr4 (92-139)||(45692986-45693033)
chr4 (461-536)||(53622304-53622379)
chr4 (482-536)||(31262917-31262970)
chr4 (94-140)||(33491522-33491568)
chr4 (478-536)||(50343883-50343941)
chr4 (93-139)||(50607683-50607729)
chr4 (96-145)||(408069-408117)
chr4 (211-252)||(37748553-37748594)
chr4 (481-526)||(47937874-47937919)
chr4 (468-505)||(49421932-49421969)
chr4 (93-142)||(52324326-52324374)
chr4 (94-139)||(54506234-54506279)
[»] chr8 (41 HSPs)
chr8 (458-544)||(32271163-32271248)
chr8 (457-536)||(40628994-40629072)
chr8 (461-519)||(14453699-14453757)
chr8 (97-142)||(24377312-24377357)
chr8 (94-142)||(31158561-31158609)
chr8 (457-536)||(1445160-1445239)
chr8 (457-536)||(18842282-18842360)
chr8 (457-536)||(38047636-38047715)
chr8 (460-535)||(44220740-44220814)
chr8 (96-142)||(27171916-27171962)
chr8 (483-536)||(2376780-2376833)
chr8 (473-526)||(12002278-12002331)
chr8 (460-536)||(28382814-28382890)
chr8 (92-140)||(29454570-29454618)
chr8 (473-537)||(37449540-37449604)
chr8 (457-536)||(1876509-1876587)
chr8 (457-536)||(8349705-8349783)
chr8 (457-536)||(35501094-35501173)
chr8 (457-532)||(41960008-41960083)
chr8 (457-521)||(4278957-4279019)
chr8 (457-526)||(31844244-31844313)
chr8 (93-142)||(43331743-43331791)
chr8 (93-142)||(44309565-44309613)
chr8 (92-136)||(4214860-4214904)
chr8 (94-142)||(34047776-34047823)
chr8 (482-526)||(43841043-43841087)
chr8 (93-136)||(6631270-6631313)
chr8 (473-536)||(11533233-11533296)
chr8 (473-536)||(20522945-20523008)
chr8 (94-140)||(2261029-2261075)
chr8 (92-142)||(2880288-2880337)
chr8 (92-142)||(12801105-12801154)
chr8 (92-142)||(17096640-17096689)
chr8 (501-543)||(30461316-30461358)
chr8 (93-139)||(37676299-37676345)
chr8 (94-139)||(117809-117854)
chr8 (93-138)||(2749669-2749714)
chr8 (478-527)||(5218083-5218132)
chr8 (93-142)||(17792202-17792251)
chr8 (93-142)||(27970011-27970059)
chr8 (97-138)||(38329839-38329880)
[»] chr6 (25 HSPs)
chr6 (456-536)||(27752647-27752728)
chr6 (93-144)||(29023965-29024016)
chr6 (84-139)||(13719101-13719156)
chr6 (457-536)||(29716791-29716870)
chr6 (462-536)||(34552534-34552608)
chr6 (463-531)||(5528051-5528119)
chr6 (457-536)||(23344572-23344651)
chr6 (96-142)||(4979446-4979492)
chr6 (465-519)||(34552211-34552265)
chr6 (84-144)||(6093649-6093710)
chr6 (462-515)||(34552354-34552407)
chr6 (457-536)||(3753121-3753200)
chr6 (457-520)||(3769344-3769407)
chr6 (94-145)||(31644757-31644808)
chr6 (94-140)||(9661752-9661798)
chr6 (92-142)||(14872685-14872734)
chr6 (473-526)||(10364754-10364807)
chr6 (483-536)||(13445783-13445836)
chr6 (94-142)||(7344675-7344722)
chr6 (95-138)||(12782652-12782695)
chr6 (94-140)||(4509430-4509476)
chr6 (94-139)||(8549916-8549961)
chr6 (93-142)||(16892902-16892951)
chr6 (94-139)||(22755241-22755286)
chr6 (211-252)||(31644647-31644688)
[»] chr7 (36 HSPs)
chr7 (457-541)||(25036991-25037075)
chr7 (93-145)||(41742580-41742632)
chr7 (456-536)||(43492227-43492307)
chr7 (457-526)||(8237961-8238029)
chr7 (94-143)||(16087298-16087347)
chr7 (92-145)||(43631405-43631458)
chr7 (93-145)||(23608347-23608399)
chr7 (84-143)||(29682034-29682093)
chr7 (465-536)||(38362256-38362327)
chr7 (457-536)||(44452068-44452147)
chr7 (92-145)||(17020070-17020122)
chr7 (86-142)||(1343011-1343066)
chr7 (98-142)||(2290794-2290838)
chr7 (94-141)||(15591384-15591431)
chr7 (473-536)||(19619993-19620056)
chr7 (457-536)||(31498656-31498734)
chr7 (465-536)||(38988707-38988778)
chr7 (458-536)||(37135459-37135537)
chr7 (94-142)||(11640295-11640342)
chr7 (84-140)||(39558595-39558651)
chr7 (484-536)||(41150068-41150120)
chr7 (457-536)||(3267637-3267715)
chr7 (93-136)||(5583228-5583271)
chr7 (93-140)||(15715903-15715950)
chr7 (92-139)||(24953290-24953337)
chr7 (457-552)||(26872811-26872906)
chr7 (457-536)||(34299770-34299848)
chr7 (92-139)||(35357699-35357746)
chr7 (92-139)||(41771770-41771817)
chr7 (457-536)||(46716180-46716258)
chr7 (92-142)||(27897580-27897629)
chr7 (482-536)||(39316344-39316398)
chr7 (93-139)||(47369581-47369627)
chr7 (94-139)||(6791799-6791844)
chr7 (457-526)||(24610865-24610933)
chr7 (93-142)||(41311053-41311101)
[»] chr5 (38 HSPs)
chr5 (461-536)||(17774312-17774387)
chr5 (96-144)||(10401050-10401098)
chr5 (457-519)||(28639570-28639632)
chr5 (95-142)||(10568829-10568876)
chr5 (457-536)||(25767551-25767630)
chr5 (93-142)||(24432150-24432199)
chr5 (457-529)||(43000757-43000829)
chr5 (461-536)||(14309118-14309192)
chr5 (473-536)||(41568709-41568772)
chr5 (92-142)||(19238792-19238841)
chr5 (457-527)||(26686679-26686748)
chr5 (457-527)||(26956410-26956479)
chr5 (93-139)||(32993688-32993734)
chr5 (97-142)||(1446077-1446122)
chr5 (94-139)||(36339208-36339253)
chr5 (94-142)||(6335390-6335437)
chr5 (457-537)||(12448671-12448750)
chr5 (94-138)||(13645871-13645915)
chr5 (94-142)||(16602722-16602769)
chr5 (92-139)||(9910404-9910451)
chr5 (95-138)||(17068994-17069037)
chr5 (473-524)||(27325866-27325917)
chr5 (96-139)||(33210372-33210415)
chr5 (457-536)||(36609158-36609236)
chr5 (93-145)||(2271133-2271187)
chr5 (84-142)||(22798429-22798487)
chr5 (478-536)||(26432263-26432321)
chr5 (478-536)||(26453688-26453745)
chr5 (93-139)||(33678154-33678200)
chr5 (482-536)||(39335671-39335724)
chr5 (93-142)||(2011417-2011465)
chr5 (93-142)||(2021680-2021728)
chr5 (211-252)||(17069113-17069154)
chr5 (93-138)||(32455301-32455346)
chr5 (483-536)||(34032142-34032195)
chr5 (92-145)||(36155848-36155901)
chr5 (211-252)||(36155970-36156011)
chr5 (97-142)||(38355075-38355120)
[»] chr2 (33 HSPs)
chr2 (94-145)||(12962021-12962072)
chr2 (457-523)||(431660-431726)
chr2 (461-536)||(9049181-9049255)
chr2 (457-536)||(12762898-12762976)
chr2 (97-144)||(45264039-45264086)
chr2 (478-530)||(37284933-37284985)
chr2 (457-536)||(12848499-12848577)
chr2 (94-140)||(45157530-45157576)
chr2 (94-139)||(1580603-1580648)
chr2 (457-530)||(3666465-3666537)
chr2 (482-531)||(8086961-8087010)
chr2 (93-142)||(11088215-11088263)
chr2 (461-530)||(12205526-12205595)
chr2 (467-536)||(28858105-28858173)
chr2 (478-534)||(30822767-30822823)
chr2 (92-140)||(35896773-35896821)
chr2 (84-140)||(42849688-42849744)
chr2 (479-530)||(3191078-3191129)
chr2 (461-536)||(8964393-8964467)
chr2 (457-536)||(24389650-24389728)
chr2 (457-536)||(25626949-25627027)
chr2 (483-526)||(33068595-33068638)
chr2 (93-136)||(33493929-33493972)
chr2 (479-529)||(40874823-40874874)
chr2 (480-530)||(3191167-3191217)
chr2 (94-140)||(6945340-6945386)
chr2 (478-536)||(33454969-33455027)
chr2 (93-139)||(40947125-40947171)
chr2 (93-142)||(4108306-4108354)
chr2 (457-526)||(11385463-11385532)
chr2 (93-142)||(33429132-33429180)
chr2 (93-142)||(33493476-33493525)
chr2 (94-139)||(40495465-40495510)
[»] scaffold0775 (1 HSPs)
scaffold0775 (94-145)||(194-245)
[»] scaffold0236 (1 HSPs)
scaffold0236 (482-526)||(19578-19622)
[»] scaffold0010 (1 HSPs)
scaffold0010 (457-536)||(26702-26780)
[»] scaffold0053 (1 HSPs)
scaffold0053 (483-536)||(5763-5816)
[»] scaffold0174 (1 HSPs)
scaffold0174 (94-138)||(32566-32610)
[»] scaffold0008 (1 HSPs)
scaffold0008 (97-142)||(45110-45155)
[»] scaffold0432 (1 HSPs)
scaffold0432 (94-140)||(3390-3436)
[»] scaffold0648 (1 HSPs)
scaffold0648 (93-142)||(1278-1326)
[»] scaffold0271 (1 HSPs)
scaffold0271 (93-142)||(15658-15706)
[»] scaffold0184 (1 HSPs)
scaffold0184 (94-139)||(16944-16989)
[»] scaffold0078 (1 HSPs)
scaffold0078 (94-139)||(55855-55900)


Alignment Details
Target: chr3 (Bit Score: 468; Significance: 0; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 211 - 813
Target Start/End: Complemental strand, 37359792 - 37359186
Alignment:
Q  211 tgattaaatcctattcattaaaagtgtaaccgaaataattttatatatgtattgtgaaagtgtaaggaatttacatatgaaactcgattctcgttctgct 310  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37359792 tgattaaatcttattcattaaaagtgtaaccgaaataattttatatatgtatcgtgaaagtgtaaggaatttacatatgaaactcgattctcgttctgct 37359693  T
Q  311 tctatattaaaactgcttatataatatttatttaacttgttggattatatatatcataaagaagttcctgaaaaaagatattataaaaaagggaaatgtt 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||    
T  37359692 tctatattaaaactgcttatataatatttatttaacttgttggattatatatattataaagaagttccttaaaaaaaatattataaaaaagggaaatgtt 37359593  T
Q  411 aagtgtcagcactaattaaagaactttaaatggtaannnnnnngataaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttataga 510  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37359592 aagtgtcagcactaattaaagaactttaaatggtaatttttttgataaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatgga 37359493  T
Q  511 ataattacttaatttaaaatgcttaagaaatatcggagcacttcttaacgagactctatnnnnnnnnntaaggg------ggaaaagttgattcttattg 604  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||         ||||||      ||||||||||||||||||||    
T  37359492 ataattacttaatttaaaatgcttaagaaatatcggggtacttcttaacgagaccctat--aaaaaaataagggggaaaaggaaaagttgattcttattg 37359395  T
Q  605 cttcatcaatatcaatcaatattattataataaagaacttggacaactattacaataaagaaattggaaaaactatcatggttgacacttggcttgtaat 704  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  37359394 cttcatcaatatcaatcaatattattataataaagaacttggacaactattacaataaagaaattggaaaaactataatggttgacacttgacttgtaat 37359295  T
Q  705 gtattgaagaactaaaccaacaaattattattcatctacaaattacaaaagaatgaaagacttgaatgaaatgaacgaatnnnnnnnttgacaactttat 804  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||    
T  37359294 gtattgaagaactaaaccaacaaattattattcatctacaaattacaaaagaatgaaagacttgaatgaaatgaacgaataaaaaaattgacaactttat 37359195  T
Q  805 tccaatctt 813  Q
    |||||||||    
T  37359194 tccaatctt 37359186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 37359998 - 37359859
Alignment:
Q  6 catgcatgtcctgccaactgagctatgttcatgggactataattatggtgttattagcgaaaattgaaaaataaaatgtatatatgtaggcaaattctac 105  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37359998 catgcatgtcctgccaactgagctatgctcatgggactataattacggtgttattagcgaaaattgaaaaataaaatgtatatatgtaggcaaattctac 37359899  T
Q  106 ggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  37359898 ggtacacccaacatatttgagtgtaccggtacaccaaccc 37359859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 461 - 536
Target Start/End: Complemental strand, 46725733 - 46725658
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||    
T  46725733 tttgtgtaataaagtgcattgaaaattgaaaattttaacatttttataaaataactacttaatttagaatgcttaa 46725658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 4577682 - 4577629
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4577682 taggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaccc 4577629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 521
Target Start/End: Original strand, 40614292 - 40614356
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattactta 521  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||||| ||||||||||||||    
T  40614292 aaagtttgtgtaataaagtgcattgaaaattgaaaacattgacatttttaaagaataattactta 40614356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 29612100 - 29612021
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| |||| |||||||||||| | ||||||||| |||||||||||||| |||| |||| ||||    
T  29612100 aaagtttgtgtaataaagtgcattggaaattgaaaactgtcacatttttaaagaataattacttattttagaatgtttaa 29612021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 535
Target Start/End: Original strand, 9342683 - 9342757
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgctta 535  Q
    ||||||||||||| || |||||||||||||||||||||||||||||  ||||||||| ||||| || ||||||||    
T  9342683 tttgtgtaataaaatgcattgaaaattgaaaactttaacatttttaatgaataattatttaatctagaatgctta 9342757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 8433437 - 8433485
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8433437 ggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaa 8433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 19914040 - 19914092
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  19914040 aggcaaattctacggtacacccaacatatttgagtgtaccggtataccaaccc 19914092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 20821383 - 20821304
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| |||| ||||| ||| |||||| ||||||| |||||||||||||| |||| |||| ||||    
T  20821383 aaagtttgtgtaataaagtgcattggaaattaaaacctttaatatttttaaagaataattacttagtttagaatgtttaa 20821304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 45758008 - 45757930
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | ||| |||| |||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||    
T  45758008 aaagtttgtgtaatca-gtgcattgtaaattgaaaactttgacatttttaaagaataattgcttaatttaacatgcttaa 45757930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 9251857 - 9251908
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaacc 144  Q
    ||||||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  9251857 aggcaaattttacggtacactcaacatatttgagtgtaccggtacaccaacc 9251908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 536
Target Start/End: Complemental strand, 24313627 - 24313552
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||| |||| || ||||||||||||||||||| ||||||||| |||||||||  |||||||| |||| ||||    
T  24313627 tttgtgtagtaaaatgcattgaaaattgaaaactttgacatttttaaagaataattgtttaatttagaatgtttaa 24313552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 52024838 - 52024787
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  52024838 ggcaaattctacggtacattcaacatatttgagtgtaccggtacaccaaccc 52024787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 536
Target Start/End: Complemental strand, 48551099 - 48551041
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||||  ||||||||    
T  48551099 attgaaaattgaaaactttgacatttttaaagaataatttcttaatttagcatgcttaa 48551041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 22853927 - 22854003
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||| |||||||||||| | | ||||||||||||||| ||||||||||| ||||   ||| ||||||||||||||||    
T  22853927 aaagtttatgtaataaagtgtaataaaaattgaaaactttgacatttttataaaata---actaaatttaaaatgcttaa 22854003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 483 - 536
Target Start/End: Original strand, 28691976 - 28692029
Alignment:
Q  483 aaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||||| | |||||||||||||||||||| ||| ||||    
T  28691976 aaattgaaaactttaacattttaaaagaataattacttaatttaatatgtttaa 28692029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 35749317 - 35749269
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  35749317 aaattctacggtacatccaacatatttgagtgtatcggtacaccaaccc 35749269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 45636088 - 45636040
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||    
T  45636088 ggcaaattctaccgtacacccaacatatttgagtgtaccggtataccaa 45636040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 132
Target Start/End: Complemental strand, 54262934 - 54262894
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtacc 132  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  54262934 taggcaaattctacggtacacccaacatatttgagtgtacc 54262894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 8965915 - 8965962
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacca 141  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  8965915 ggcaaattctacggtacatccaacatatttgagtgtactggtacacca 8965962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 29491662 - 29491709
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  29491662 aggcaaattctatggtacacccaatatatttgagtgtaccggtacacc 29491709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 54911280 - 54911202
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||| |||||| || || |||||||||| |||||||||||||||| | |||||||||| |||||||| |||| ||||    
T  54911280 aaagtttatgtaatcaa-tgtattgaaaatttaaaactttaacattttaaaagaataattatttaatttagaatgtttaa 54911202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 527
Target Start/End: Complemental strand, 37388482 - 37388417
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaa 527  Q
    |||||||||| || || |||||||| |||||| ||| ||||||||| ||||||||||||||||||||    
T  37388482 tttgtgtaatcaa-tgcattgaaaactgaaaaatttcacatttttaaagaataattacttaatttaa 37388417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 4521676 - 4521628
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  4521676 aggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 4521628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 29806017 - 29806062
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||||    
T  29806017 ggcaaattctacggtacacctaacatatttgagtgcaccggtacac 29806062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 46671337 - 46671382
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||    
T  46671337 ggcaaattatacggtacacccaatatatttgagtgtaccggtacac 46671382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 457 - 525
Target Start/End: Complemental strand, 22772940 - 22772872
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaattt 525  Q
    |||||||||  |||||| || |||| |||||||||||||| | ||| |||| |||||||||||||||||    
T  22772940 aaagtttgtagaataaattgcattggaaattgaaaactttgaaattgttatggaataattacttaattt 22772872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 40477759 - 40477803
Alignment:
Q  96 caaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||    
T  40477759 caaattctatggtacacccaatatatttgagtgtaccggtacacc 40477803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 43745760 - 43745708
Alignment:
Q  88 tatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||||||||| ||||||| ||| |||| ||||| ||||||||||||    
T  43745760 tatgtaggcaaattctatggtacactcaatatatttgagtataccggtacacc 43745708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 50030158 - 50030110
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||||||||||| ||||||||| |||| |||||    
T  50030158 ggcaaattctaccgtacacccaacatatttgagtgtacaggtataccaa 50030110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 50412479 - 50412435
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  50412479 ggcaaattctatggtacacccaatatatttgagtgtaccggtaca 50412435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 3027011 - 3027090
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||| | ||||| |||| ||| ||||| |||| | ||||||| | || |||||||||||||| |||||||||    
T  3027011 aaagtttgtgtagtgaagtgcattggaaaatgaaacctttgatatttttaaataaaaattacttaatttagaatgcttaa 3027090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 42622257 - 42622210
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||| || ||||||||||| |||| ||||||||||||||||||    
T  42622257 aggcaaattttatggtacacccaatatatttgagtgtaccggtacacc 42622210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 47175468 - 47175514
Alignment:
Q  95 gcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||||    
T  47175468 gcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 47175514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 536
Target Start/End: Complemental strand, 12140204 - 12140146
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| |||||||||||||| ||||||| | |||||||||| ||||||||  ||||||||    
T  12140204 attggaaattgaaaactttgacattttaaaagaataattatttaatttagcatgcttaa 12140146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 25061992 - 25062034
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataat 515  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||    
T  25061992 agtgcattgaaaattgaaaattttaacatttttaaagaataat 25062034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 26885380 - 26885330
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||| || ||||||||||| |||| |||||||| |||||||||||    
T  26885380 taggcaaattttatggtacacccaatatatttgagtgtatcggtacaccaa 26885330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 32636625 - 32636671
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||| ||||||||||| |||| ||||||||||| |||||    
T  32636625 aggcaaattctatggtacacccaatatatttgagtgtaccgatacac 32636671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 1020975 - 1021020
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||  |||| |||||||||||||||||    
T  1020975 ggcaaattctatggtacacccactatatttgagtgtaccggtacac 1021020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 5528704 - 5528745
Alignment:
Q  98 aattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||| |||||||| ||||||| |||||||||||||||||    
T  5528704 aattctatggtacacctaacatatttgagtgtaccggtacac 5528745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 9506898 - 9506951
Alignment:
Q  89 atgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||||| | ||||||||| |||| |||||| | |||||||||||    
T  9506898 atgtaggcaaattctatgatacacccaatatatttgagtgcatcggtacaccaa 9506951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 9514873 - 9514926
Alignment:
Q  89 atgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||||| | ||||||||| |||| |||||| | |||||||||||    
T  9514873 atgtaggcaaattctatgatacacccaatatatttgagtgcatcggtacaccaa 9514926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 463 - 536
Target Start/End: Original strand, 12908850 - 12908923
Alignment:
Q  463 tgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||| ||||| ||| ||||||||||| ||| |  |||||| | ||||||||||| |||||||||| ||||    
T  12908850 tgtgtaattaagtgcattaaaaattgaaaattttgatttttttaaaaaataattactttatttaaaatgtttaa 12908923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 51756499 - 51756458
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccg 133  Q
    ||||||||||||| ||||||||||| |||| |||||||||||    
T  51756499 taggcaaattctatggtacacccaatatatttgagtgtaccg 51756458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 9e-23; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 31807806 - 31807885
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| ||||||||||||||||| | ||||||||| |||||||||||||| |||| |||||||||    
T  31807806 aaagtttgtgtaataaagtgcattgaaaattgaaaactatcacatttttaaagaataattacttattttagaatgcttaa 31807885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 4040972 - 4040894
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||| ||  ||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||||||    
T  4040972 aaagtttgtgtaataa-gtatattgaaaattgaaaactttgacacttttatgtaataattacttaatttaaaatgcttaa 4040894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 31043080 - 31043002
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| || || ||||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||    
T  31043080 aaagtttgtgtaatcaa-tgcattgaaaattgaaaactttgacatttttaaaaaataattacttaatttagaatgcttaa 31043002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 40053372 - 40053294
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||| |||| |||||| ||||||| |||||||||    
T  40053372 aaagtttgtgtaataaa-tgtattgaaaattgaaaactttgacatttttaaagaacaattacctaatttagaatgcttaa 40053294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 39973971 - 39973893
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||| |||| || || ||||||||||||||||||||||||||| | |||||||||||||||||||  ||||||||    
T  39973971 aaagtttgtataatcaa-tgcattgaaaattgaaaactttaacattttaaaagaataattacttaatttagcatgcttaa 39973893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 24511591 - 24511636
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24511591 aaattctacggtacacccaacatatttgagtgtaccggtacaccaa 24511636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 25082154 - 25082105
Alignment:
Q  96 caaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  25082154 caaattctacggtacacctaacatatttgagtgtaccggtacaccaaccc 25082105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 478 - 531
Target Start/End: Original strand, 51904616 - 51904669
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatg 531  Q
    |||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  51904616 attggaaattgaaaactttaacattttaaaagaataattacttaatttaaaatg 51904669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 31401361 - 31401409
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  31401361 ggcaaattctacggtacacccaacatatttgagtgcaccggtacaccaa 31401409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 39807603 - 39807521
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacat---ttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||| |||||||||||| ||||||||||||||| ||||||||   |||| | ||||||| ||||||||||||||| ||||    
T  39807603 aaagtttatgtaataaagtgcattgaaaattgaaaattttaacatttgttttgttgaataatgacttaatttaaaatgtttaa 39807521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 46707753 - 46707705
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacacca 141  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  46707753 aggcaaattctacggtacatccaacatatttgagtgtaccggtacacca 46707705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 521
Target Start/End: Original strand, 8791467 - 8791530
Alignment:
Q  458 aagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattactta 521  Q
    ||||||| ||||||||| | ||||||||||||||||||| ||||||||| ||| ||||||||||    
T  8791467 aagtttgcgtaataaagggcattgaaaattgaaaacttttacatttttaaagactaattactta 8791530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 27934755 - 27934834
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||||||| || ||||||||||||||  ||| | ||||||| | |||||||| |||||||| |||||||||    
T  27934755 aaagtttgtgtaataaattgtattgaaaattgaaacttttgatatttttaaataataattatttaatttagaatgcttaa 27934834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 473 - 536
Target Start/End: Original strand, 42573811 - 42573874
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| |||||||||||||||| |||||||||| | |||||||||||||||||||  ||||||||    
T  42573811 agtgcattgaaaattgaaaaccttaacattttaaaagaataattacttaatttagcatgcttaa 42573874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 536
Target Start/End: Original strand, 759254 - 759332
Alignment:
Q  458 aagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||||||||| |||| |||||| ||||||| ||| ||||||  ||| |||| |||||||| |||||||||    
T  759254 aagtttgtgtaataaagtgtattggaaattggaaactttgacaattttatgaaatgattatttaatttagaatgcttaa 759332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 457 - 526
Target Start/End: Original strand, 48913 - 48981
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||||||||||   ||| ||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  48913 aaagtttgtgtaatcg-gtgcattgaaaattgaaaacttttacatttttcaagaataattacttaattta 48981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 37188555 - 37188627
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| ||||||||||       || |||||||||| ||||||||| ||||||||||||||||||    
T  37188555 aaagtttgtgtaataaagtgcattgaaaatt-------ttgacatttttattgaataattatttaatttaaaatgcttaa 37188627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 526
Target Start/End: Complemental strand, 290669 - 290602
Alignment:
Q  458 aagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||||||||| | ||| |||| |||||||||||||| ||||||| | |||||||||||||||||||    
T  290669 aagtttgtgtaatca-gtgcattgtaaattgaaaactttgacattttaaaagaataattacttaattta 290602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 7489366 - 7489310
Alignment:
Q  84 tatatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||| ||||||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  7489366 tatatatataggcaaattctatggtacacccaatatatttgagtgtaccgatacacc 7489310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 26308609 - 26308561
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  26308609 ggcaaattctatcgtacacccaacatatttgagtgtaccggtacaccaa 26308561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 461 - 529
Target Start/End: Original strand, 32787286 - 32787354
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaa 529  Q
    ||||||||||||| || |||   ||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  32787286 tttgtgtaataaaatgtattaggaattgaacactttaacatttttaaagattaattacttaatttaaaa 32787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 482 - 530
Target Start/End: Original strand, 34833738 - 34833786
Alignment:
Q  482 aaaattgaaaactttaacatttttatagaataattacttaatttaaaat 530  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  34833738 aaaattgaaaactttaatatttttaaagaataattatttaatttaaaat 34833786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 44382423 - 44382376
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacca 141  Q
    |||||||| || |||||||||||||||| |||||||||||||||||||    
T  44382423 ggcaaattttatggtacacccaacatatttgagtgtaccggtacacca 44382376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 48947268 - 48947205
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| |||| |||||||||||||| ||||||||| | |||||||||||||||||  ||||||||    
T  48947268 agtgcattggaaattgaaaactttgacatttttaaaaaataattacttaatttagtatgcttaa 48947205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 14077327 - 14077376
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  14077327 taggcaaattctacggtacatccaacat-tttgagtgtaccggtacaccaa 14077376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 17554225 - 17554179
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||    
T  17554225 aggcaaattctatggtacacccaatatatttgagtgtaccggtacac 17554179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 31076017 - 31075971
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  31076017 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacc 31075971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 32145077 - 32145031
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    |||||||||||||| ||||||||||||| | ||||||||||||||||    
T  32145077 taggcaaattctaccgtacacccaacatttttgagtgtaccggtaca 32145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 5360609 - 5360561
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  5360609 aggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 5360561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 33081987 - 33082035
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  33081987 aggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 33082035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 34101109 - 34101068
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  34101109 aaattctaccgtacacccaacatatttgagtgtaccggtaca 34101068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 45809447 - 45809488
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggt 135  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  45809447 ggcaaattctactgtacacccaacatatttgagtgtaccggt 45809488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 530
Target Start/End: Complemental strand, 1656511 - 1656443
Alignment:
Q  462 ttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaat 530  Q
    ||||||| |||| || |||| |||||||||| ||| ||||||||| | |||||||| ||||||||||||    
T  1656511 ttgtgtattaaaatgcattggaaattgaaaattttgacatttttaaaaaataattatttaatttaaaat 1656443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 32710158 - 32710106
Alignment:
Q  87 atatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||| ||||||||||||| |||||| |||| |||| |||||||||||||||||    
T  32710158 atatataggcaaattctatggtacatccaatatatttgagtgtaccggtacac 32710106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 44978869 - 44978916
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  44978869 ggcaaattctatggtacacccaaca-atttgagtgtaccggtacaccaa 44978916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 51056196 - 51056244
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacacca 141  Q
    |||||||||||| |||||||| || |||| |||||||||||||||||||    
T  51056196 aggcaaattctatggtacacctaatatatttgagtgtaccggtacacca 51056244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 16113998 - 16113920
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | ||| |||| |||||||||||||| ||||||| | | |||||||||||||| ||  ||||||||    
T  16113998 aaagtttgtgtaatca-gtgcattggaaattgaaaactttgacattttgaaaaaataattacttaatatagtatgcttaa 16113920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 536
Target Start/End: Original strand, 34861254 - 34861317
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| |||| |||||||||  ||| ||||||||| | ||||||||||||||||| |||||||||    
T  34861254 agtgtattggaaattgaaatgtttgacatttttaaaaaataattacttaatttagaatgcttaa 34861317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 17525438 - 17525480
Alignment:
Q  96 caaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    |||||||||| |||||||| |||||| ||||||||||||||||    
T  17525438 caaattctaccgtacacccgacatatttgagtgtaccggtaca 17525480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 467 - 529
Target Start/End: Complemental strand, 24075169 - 24075107
Alignment:
Q  467 taataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaa 529  Q
    |||||||||| |||||||||| || ||||| ||||||||| ||||  |||| |||||||||||    
T  24075169 taataaagtgcattgaaaattaaacactttgacatttttaaagaaatattatttaatttaaaa 24075107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 35913040 - 35912995
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||    
T  35913040 taggcaaattctatggtacacccaacat-tttgagtgtaccggtaca 35912995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 48977283 - 48977237
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| ||||||| ||| |||| ||||||||||||||||||    
T  48977283 ggcaaattctatggtacactcaatatatttgagtgtaccggtacacc 48977237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 51787875 - 51787829
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| |||||| |||| |||| ||||||||||||||||||    
T  51787875 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacc 51787829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 477841 - 477796
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  477841 ggcaaattctatggtacacccaatatatttgagtgtatcggtacac 477796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 6526835 - 6526790
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||| |||| ||||||||||| |||||    
T  6526835 ggcaaattctatggtacacccaatatatttgagtgtaccgatacac 6526790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 24245880 - 24245839
Alignment:
Q  98 aattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||||| ||||||||| ||||| |||||||||||    
T  24245880 aattctacggtacatccaacatatatgagtataccggtacac 24245839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 526
Target Start/End: Original strand, 33791766 - 33791834
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||||||||||   ||| |||| |||||||||| ||| ||||||| | |||||||||||||||||||    
T  33791766 aaagtttgtgtaatcg-gtgtattggaaattgaaaaatttgacattttaaaagaataattacttaattta 33791834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 34256452 - 34256500
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  34256452 aggcaaattctatggtacacccaaca-atttgagtgtatcggtacaccaa 34256500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 52365973 - 52365928
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||||||||||||||| | | |||||||| |||||||    
T  52365973 aaattctacggtacacccaacatatttaaatgtaccggcacaccaa 52365928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 530
Target Start/End: Complemental strand, 35153331 - 35153258
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaat 530  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||||||||    
T  35153331 aaagtttgtgcaataaagtgcattgaaaattgaaaactttaacatttttaaagaataatgatttaatttaaaat 35153258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 38682016 - 38682095
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| |||||||| ||||    
T  38682016 aaagcttgtgtaataaagtgtattgaaaattgaaaactttaacaattttaaagattaattacttaacttaaaatgtttaa 38682095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 27736991 - 27736938
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27736991 taggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaccc 27736938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 461 - 536
Target Start/End: Original strand, 49622976 - 49623051
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||  |||  |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  49622976 tttgtgtaataaagtatattagaaattgaaaattttgacatttttatggaataattacttaatttaaaatgcttaa 49623051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 33492004 - 33491951
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  33492004 taggcaaattctacggtacacccaatatatttgagtgtaccggtacaccaaccc 33491951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 32175511 - 32175434
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||| ||||||||  |||||||||||||||||   ||| |||||| ||||||||||||||||||||||||||||    
T  32175511 aaagtttgtgcaataaagtacattgaaaattgaaaactg--acacttttatggaataattacttaatttaaaatgcttaa 32175434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 50187503 - 50187555
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  50187503 aggcaaattttacggtacacccaacatatttgagtgtaccggtacaccaaccc 50187555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 3179033 - 3179112
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||||| | | ||||||||| ||||| ||| |||||    
T  3179033 aaagtttgtgtaataaagtgtattggaaattgaaaactttaacttttttaaaaattaattacttgatttagaatacttaa 3179112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 46663335 - 46663383
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  46663335 aaattctacgatacacccaacatatttgagtgtaccggtacaccaaccc 46663383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 51944435 - 51944483
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  51944435 ggcaaattctacggtacacccaacatatttgagtgtactggtacaccaa 51944483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 478 - 541
Target Start/End: Complemental strand, 45743374 - 45743311
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaagaaat 541  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||||| || ||||| ||||    
T  45743374 attgaaaattgaaaactttgacatttttaaagaataatttcttaatttaacatacttaaaaaat 45743311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 536
Target Start/End: Original strand, 46570555 - 46570630
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||| |  ||| |||||| |||||||||||||||||| ||| |||| ||||||||||||||| ||||    
T  46570555 tttgtgtaataaaatatattaaaaattaaaaactttaacatttttaaagagtaataacttaatttaaaatgtttaa 46570630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 48647438 - 48647383
Alignment:
Q  84 tatatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||| ||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  48647438 tatatatataggcaaattctatggtacacccaatatatttgagtgtaccggtacac 48647383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 536
Target Start/End: Complemental strand, 40252715 - 40252657
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||||||||||||||||||| | || ||||||||||||||| ||| ||||    
T  40252715 attgaaaattgaaaactttaacatttttaaataacaattacttaatttaatatgtttaa 40252657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 478 - 536
Target Start/End: Original strand, 49951737 - 49951795
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||  ||||||||    
T  49951737 attgaaaattgaaaactttgacattttaaaagaataattacttaatttagcatgcttaa 49951795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 457 - 526
Target Start/End: Complemental strand, 23614695 - 23614627
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||| |||||||||||| ||||||||||| |||||||||| |||||| | |||||||| ||||||||    
T  23614695 aaagtttatgtaataaagtgtattgaaaattg-aaactttaacgtttttaaaaaataattatttaattta 23614627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 43959390 - 43959346
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  43959390 ggcaaattctaccgtacacccaacatatctgagtgtaccgataca 43959346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 456 - 542
Target Start/End: Complemental strand, 10506005 - 10505916
Alignment:
Q  456 taaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaa---taattacttaatttaaaatgcttaagaaata 542  Q
    |||||||||||||||||| |  |||| |||||||||||||| | ||||||| | ||   |||||| |||||||||||||||||| |||||    
T  10506005 taaagtttgtgtaataaaatatattgtaaattgaaaactttgagatttttaaataatactaattatttaatttaaaatgcttaaaaaata 10505916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 21687612 - 21687691
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| ||||||||||||| ||||| | ||| ||| ||||  ||||||||| ||| || ||||||    
T  21687612 aaagtttgtgtaataaagtgcattgaaaattgaacactttgatattattaaagaaatattacttaacttagaaagcttaa 21687691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 53261637 - 53261559
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| |  || |||| |||||||||||||| | ||||||| |||||||||||||||||||  ||||||||    
T  53261637 aaagtttgtgtaatcac-tgcattggaaattgaaaacttttaaatttttaaagaataattacttaatttagcatgcttaa 53261559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 28967561 - 28967611
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||||  |||||| ||||||| ||||||||||||||||||||    
T  28967561 taggcaaattctaccctacaccaaacatatttgagtgtaccggtacaccaa 28967611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 478 - 536
Target Start/End: Original strand, 40173525 - 40173583
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||| ||||||||||||||||||  |||| ||||||||||||| |||| ||||    
T  40173525 attgaaaattaaaaactttaacatttttaatgaatgattacttaatttagaatgtttaa 40173583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 42881429 - 42881387
Alignment:
Q  100 ttctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  42881429 ttctaccgtacacccaacatatttgagtgtaccggtacaccaa 42881387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 53936919 - 53936873
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  53936919 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacc 53936873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 36569627 - 36569696
Alignment:
Q  73 aaaataaaatgtatatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||| |||||||| |||||||||| || ||||||||||| | || || ||||| |||||||||||    
T  36569627 aaaataaaaggtatatatataggcaaattatatggtacacccaataaatttgggtgtatcggtacaccaa 36569696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Original strand, 52650732 - 52650785
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    |||||||||||||||||||| ||| |||||| || ||||||||| |||||||||    
T  52650732 agtgaattgaaaattgaaaattttgacatttgtaaagaataatttcttaattta 52650785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 126574 - 126626
Alignment:
Q  86 tatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    ||||| ||||||||||||||||||||| ||  |||| ||||||||||||||||    
T  126574 tatatataggcaaattctacggtacactcactatatttgagtgtaccggtaca 126626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 17370682 - 17370635
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  17370682 ggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 17370635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 478 - 526
Target Start/End: Complemental strand, 22889319 - 22889271
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||||||||||| ||||||||||||| | || ||||||||||||||    
T  22889319 attgaaaattgaaaaatttaacatttttaaaaaacaattacttaattta 22889271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 478 - 526
Target Start/End: Complemental strand, 22940983 - 22940935
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||||||||||| ||||||||||||| | || ||||||||||||||    
T  22940983 attgaaaattgaaaaatttaacatttttaaaaaacaattacttaattta 22940935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 473 - 537
Target Start/End: Original strand, 23136549 - 23136613
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaag 537  Q
    |||| |||| |||||||||||||| | ||||| | |||||||||||||||||||| || ||||||    
T  23136549 agtgcattggaaattgaaaacttttaaattttaaaagaataattacttaatttaatatacttaag 23136613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 48207078 - 48207125
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  48207078 ggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 48207125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 12356830 - 12356775
Alignment:
Q  84 tatatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||| ||| ||||||||| ||||||||||  |||| |||||||||||||||||    
T  12356830 tatatatatagtcaaattctatggtacacccactatatttgagtgtaccggtacac 12356775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 27761809 - 27761762
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||||| |||||||| || |||| |||||||||||||||||    
T  27761809 taggcaaattctatggtacacctaatatatttgagtgtaccggtacac 27761762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 36876084 - 36876162
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| || || |||| ||||||||||| || ||||||| | |||||| ||||||||||||  ||||||||    
T  36876084 aaagtttgtgtaatcaa-tgtattggaaattgaaaacatttacattttaaaagaatagttacttaatttagcatgcttaa 36876162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 45693033 - 45692986
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||||| ||||||||||  |||| |||||||||||||||||    
T  45693033 taggcaaattctatggtacacccactatatttgagtgtaccggtacac 45692986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 536
Target Start/End: Complemental strand, 53622379 - 53622304
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||  || |||||||||| ||| ||||||| | | || ||||||||||||||| ||| ||||    
T  53622379 tttgtgtaataaagtgagctggaaattgaaaattttgacattttaaaaaaaaaattacttaatttaagatgtttaa 53622304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 31262970 - 31262917
Alignment:
Q  482 aaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||| ||||||||| ||||||||| | ||||||||||||||||| |||||||||    
T  31262970 aaaatcgaaaactttgacatttttaaa-aataattacttaatttagaatgcttaa 31262917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 33491568 - 33491522
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| |||||| |||| |||| ||||||||||||||||||    
T  33491568 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacc 33491522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 536
Target Start/End: Original strand, 50343883 - 50343941
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||| |||  ||| || |||||| |||||||||||||| ||||||||||||||    
T  50343883 attgaaaattaaaatatttgacttttttaaagaataattacttattttaaaatgcttaa 50343941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 50607683 - 50607729
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||| || ||||||||||| |||| |||||||||||||||||    
T  50607683 aggcaaattttatggtacacccaatatatttgagtgtaccggtacac 50607729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 408069 - 408117
Alignment:
Q  96 caaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||||| |||||| ||||||| ||||||||| |||||||||||||    
T  408069 caaattctacgatacacc-aacatatttgagtgtactggtacaccaaccc 408117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 37748553 - 37748594
Alignment:
Q  211 tgattaaatcctattcattaaaagtgtaaccgaaataatttt 252  Q
    |||||||||| ||||||| |||||||||| ||||||||||||    
T  37748553 tgattaaatcttattcatcaaaagtgtaaacgaaataatttt 37748594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 526
Target Start/End: Complemental strand, 47937919 - 47937874
Alignment:
Q  481 gaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    |||||||||||||||| || |||||| ||||||||||| |||||||    
T  47937919 gaaaattgaaaactttgacttttttaaagaataattacataattta 47937874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 505
Target Start/End: Original strand, 49421932 - 49421969
Alignment:
Q  468 aataaagtgaattgaaaattgaaaactttaacattttt 505  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  49421932 aataaagtgcattggaaattgaaaactttaacattttt 49421969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 52324374 - 52324326
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||| || |||||||||||||| | ||||||||||||||||||||    
T  52324374 aggcaaattttatggtacacccaacattt-tgagtgtaccggtacaccaa 52324326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 54506279 - 54506234
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||||||||| |||  |||| |||||||||||||||||    
T  54506279 ggcaaattctacggtacatccactatatttgagtgtaccggtacac 54506234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 9e-20; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 458 - 544
Target Start/End: Complemental strand, 32271248 - 32271163
Alignment:
Q  458 aagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaagaaatatc 544  Q
    ||||||||||||| || ||||||  |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||    
T  32271248 aagtttgtgtaatcaa-tgaattagaaattgaaaactttaacatttttaaaaaataatttcttaatttaaaatgcttaaaaaatatc 32271163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 40628994 - 40629072
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | |||||||| ||||| ||||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  40628994 aaagtttgtgtaatca-gtgaattggaaattaaaaactttaacatttttaatgaataattacttaatttaacatgtttaa 40629072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 461 - 519
Target Start/End: Complemental strand, 14453757 - 14453699
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattact 519  Q
    |||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||||    
T  14453757 tttgtgtaataaagtgcattgaaaattaaaaactttgacatttttatggaataattact 14453699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 24377312 - 24377357
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24377312 aaattctacggtacacccaacatatttgagtgtaccggtacaccaa 24377357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 31158561 - 31158609
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  31158561 ggcaaattctacggtacacccaacatatttgagtgcaccggtacaccaa 31158609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 1445160 - 1445239
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||| ||| |||   ||||||||||||| || ||||||    
T  1445160 aaagtttgtgtaataaagtgcattgaaaattgaacactttgacattattaaagagatattacttaatttagaaagcttaa 1445239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 18842282 - 18842360
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| || |  ||| |||||| |||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  18842282 aaagtttgtgtaatcaa-tacattaaaaattaaaaactttgacatttttaaagaataattacttaatttaaaatggttaa 18842360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 38047636 - 38047715
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| ||| |||||| |||  ||| |||||| || |||| |||||||||||||| |||||||||    
T  38047636 aaagtttgtgtaataaagtgcattaaaaattaaaatttttgacatttataaagaaaaattacttaatttagaatgcttaa 38047715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 535
Target Start/End: Original strand, 44220740 - 44220814
Alignment:
Q  460 gtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgctta 535  Q
    ||||||||||| | ||| |||| |||||||||||||| ||||||| | |||||||||||||||||||| |||||||    
T  44220740 gtttgtgtaatga-gtgcattggaaattgaaaactttgacattttaaaagaataattacttaatttaacatgctta 44220814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 27171916 - 27171962
Alignment:
Q  96 caaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  27171916 caaattctaccgtacacccaacatatttgagtgtaccggtacaccaa 27171962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 483 - 536
Target Start/End: Original strand, 2376780 - 2376833
Alignment:
Q  483 aaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | ||||||| |||||||||| ||||||||||||||||||    
T  2376780 aaattgaaaactttgatatttttaaagaataattatttaatttaaaatgcttaa 2376833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 12002331 - 12002278
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    |||| |||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  12002331 agtgcattggaaattgaaaacttttacatttttaaagaataattacttaattta 12002278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 536
Target Start/End: Original strand, 28382814 - 28382890
Alignment:
Q  460 gtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||| |||||||||| ||| ||||||| ||| ||||||||||| | | |||| ||||||||||||||||| ||||    
T  28382814 gtttgtataataaagtgtattaaaaattgtaaattttaacattttaaaaaaatatttacttaatttaaaatgtttaa 28382890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 29454618 - 29454570
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  29454618 taggcaaattctatggtacacccaatatatttgagtgtaccggtacacc 29454570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 473 - 537
Target Start/End: Complemental strand, 37449604 - 37449540
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaag 537  Q
    |||| ||||||||||||||| ||| ||||||| | | |||||||||||||||||||||| |||||    
T  37449604 agtgtattgaaaattgaaaagtttgacattttaaaaaaataattacttaatttaaaatgtttaag 37449540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 1876509 - 1876587
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | ||| |||| |||||||||| ||| ||||||| | |||||||||||||||||||  ||||||||    
T  1876509 aaagtttgtgtaatca-gtgcattggaaattgaaaattttgacattttaaaagaataattacttaatttagcatgcttaa 1876587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 8349783 - 8349705
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||| |||||||||||| ||| |||||| |||||||| ||||||||| || ||| ||| ||||||||||||| ||||    
T  8349783 aaagtttatgtaataaagtgtattaaaaatttaaaactttgacatttttaaag-atagttatttaatttaaaatgtttaa 8349705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 35501094 - 35501173
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| |||| ||||| |||||||||| ||||| | ||| |||||||| ||| || |||| ||||    
T  35501094 aaagtttgtgtaataaagtgcattggaaattaaaaactttaatattttcaaagattaattactaaatgtagaatgtttaa 35501173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 532
Target Start/End: Original strand, 41960008 - 41960083
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgc 532  Q
    ||||||||| |||||||||| |||| ||  | |||||||||||||||||| |||||||||||| ||| || |||||    
T  41960008 aaagtttgtataataaagtgcattggaagcttaaaactttaacatttttaaagaataattactaaatgtagaatgc 41960083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 521
Target Start/End: Complemental strand, 4279019 - 4278957
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattactta 521  Q
    ||||||||||||||   ||| |||| ||||||||||||||| |||||||||| ||||||||||||    
T  4279019 aaagtttgtgtaatg--gtgtattggaaattgaaaactttatcatttttataaaataattactta 4278957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 526
Target Start/End: Original strand, 31844244 - 31844313
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||||| |||| ||||| |||| ||||| |||||||| || ||||||  ||||||||||||||||||    
T  31844244 aaagtttgtataatgaagtgcattggaaattcaaaactttgacttttttaaggaataattacttaattta 31844313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 43331743 - 43331791
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  43331743 aggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 43331791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 44309565 - 44309613
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  44309565 aggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 44309613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 4214904 - 4214860
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggta 136  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||    
T  4214904 taggcaaattctatggtacacccaatatatttgagtgtaccggta 4214860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 34047823 - 34047776
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  34047823 ggcaaattctatggtacacccaaca-atttgagtgtaccggtacaccaa 34047776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 482 - 526
Target Start/End: Complemental strand, 43841087 - 43841043
Alignment:
Q  482 aaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||    
T  43841087 aaaattgaaaaatttaatatttttaaagaataattacttaattta 43841043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 6631313 - 6631270
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggta 136  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||    
T  6631313 aggcaaattctatggtacacccaatatatttgagtgtaccggta 6631270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 11533296 - 11533233
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| |||| |||||||||||||| ||||||||| |||||||||  ||||||||| ||| ||||    
T  11533296 agtgcattggaaattgaaaactttgacatttttaaagaataatttattaatttaacatgtttaa 11533233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 20523008 - 20522945
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| ||||||||||||||||||| | ||||| | ||||||||||||||| |||  ||||||||    
T  20523008 agtgcattgaaaattgaaaacttttaaattttgaaagaataattacttaacttagcatgcttaa 20522945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 2261029 - 2261075
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| ||||||| ||| |||| ||||||||||||||||||    
T  2261029 ggcaaattctatggtacactcaatatatttgagtgtaccggtacacc 2261075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 2880337 - 2880288
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||| ||||||| |||||| | ||||||||||||||||||||    
T  2880337 taggcaaattctatggtacactcaacattt-tgagtgtaccggtacaccaa 2880288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 12801105 - 12801154
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||| ||||||||||| | || ||||||||||||||||||||    
T  12801105 taggcaaattctatggtacacccaa-aaatttgagtgtaccggtacaccaa 12801154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 17096689 - 17096640
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||| |||||||||||||| | |||||||| |||||||||||    
T  17096689 taggcaaattctatggtacacccaacat-tttgagtgtatcggtacaccaa 17096640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 501 - 543
Target Start/End: Complemental strand, 30461358 - 30461316
Alignment:
Q  501 tttttatagaataattacttaatttaaaatgcttaagaaatat 543  Q
    |||||| |||||||||||||| |||||||||||||| ||||||    
T  30461358 tttttaaagaataattacttattttaaaatgcttaaaaaatat 30461316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 37676345 - 37676299
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||| ||||||||||  |||| |||||||||||||||||    
T  37676345 aggcaaattctatggtacacccactatatttgagtgtaccggtacac 37676299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 117809 - 117854
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||  |||| |||||||||||||||||    
T  117809 ggcaaattctatggtacacccactatatttgagtgtaccggtacac 117854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 2749714 - 2749669
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    |||||||||||| ||||||||||| |||| |||||||||| |||||    
T  2749714 aggcaaattctatggtacacccaatatatttgagtgtacctgtaca 2749669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 527
Target Start/End: Original strand, 5218083 - 5218132
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaa 527  Q
    |||||||||| |||| ||||||||||||| |||||||||  |||||||||    
T  5218083 attgaaaattaaaaattttaacatttttaaagaataattttttaatttaa 5218132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 17792202 - 17792251
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||  |||| ||||||||| ||||||||| ||||||||||    
T  17792202 aggcaaattctaccatacatccaacatatttgagtgtactggtacaccaa 17792251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 27970011 - 27970059
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||||||||| || ||||||||||||| ||||||    
T  27970011 aggcaaattctatggtacacccaaca-atttgagtgtaccggtgcaccaa 27970059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 38329880 - 38329839
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    |||||||| ||||||||||| |||| ||||||||||||||||    
T  38329880 aaattctatggtacacccaatatatttgagtgtaccggtaca 38329839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 456 - 536
Target Start/End: Complemental strand, 27752728 - 27752647
Alignment:
Q  456 taaagtttgtgtaataaagtgaatt-gaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||||||||||| ||| |||||||||||||||| |||||| |||| ||||||||||||||||| |||| ||||    
T  27752728 taaagtttgtgtaataaagtgcattagaaaattgaaaactttgacatttgtataaaataattacttaatttagaatgtttaa 27752647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 29024016 - 29023965
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaacc 144  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29024016 aggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaacc 29023965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 13719101 - 13719156
Alignment:
Q  84 tatatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||| || ||||||||||||||||||||||||||| |||||||||||||||||    
T  13719101 tatatatatatgcaaattctacggtacacccaacatatttgagtgtaccggtacac 13719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 29716791 - 29716870
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| |||| |||||||||||||| ||||||| | | ||||||| || |||||| |||||||||    
T  29716791 aaagtttgtgtaataaagtgcattggaaattgaaaactttgacattttaaaaaaataattgctgaatttagaatgcttaa 29716870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 462 - 536
Target Start/End: Original strand, 34552534 - 34552608
Alignment:
Q  462 ttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||| ||||||  |||||||||| |||||||||| ||||||| |||||||||||| ||| ||||||||||||    
T  34552534 ttgtgtattaaagtacattgaaaattaaaaactttaatatttttaaagaataattactaaatgtaaaatgcttaa 34552608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 463 - 531
Target Start/End: Original strand, 5528051 - 5528119
Alignment:
Q  463 tgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatg 531  Q
    ||||| ||||| || |||||||||| |||||||| |||||||| ||||||||||| |||||||||||||    
T  5528051 tgtgttataaaatgcattgaaaatttaaaactttgacatttttgtagaataattatttaatttaaaatg 5528119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 23344651 - 23344572
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| |||| |||||||| ||||| |||||| || ||||  ||||||||||||| || ||||||    
T  23344651 aaagtttgtgtaataaagtgcattggaaattgaacactttgacatttgtaaagaaatattacttaatttagaaagcttaa 23344572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 4979492 - 4979446
Alignment:
Q  96 caaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||    
T  4979492 caaattctacggtacacccaacatatttgagtgtatcggtacaccaa 4979446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 519
Target Start/End: Original strand, 34552211 - 34552265
Alignment:
Q  465 tgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattact 519  Q
    ||||||||| || ||||||||||||||||||||| ||||||| ||||||||||||    
T  34552211 tgtaataaaatgcattgaaaattgaaaactttaatatttttaaagaataattact 34552265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 6093649 - 6093710
Alignment:
Q  84 tatatatgta-ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaacc 144  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  6093649 tatatatgtatggcaaattctacgatacacccaacatatttgagtgtatcggtacacaaacc 6093710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 34552354 - 34552407
Alignment:
Q  462 ttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataat 515  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  34552354 ttgtgtaataaagtgcattggaaattgaaaactttaatatttttaaagaataat 34552407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 3753121 - 3753200
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||  |  |||||||||||||||||||||| | ||||| | ||||||||||||| |||||  ||||||||    
T  3753121 aaagtttgtgtaaccatttgaattgaaaattgaaaacttttaaattttgaaagaataattactttatttatcatgcttaa 3753200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 520
Target Start/End: Original strand, 3769344 - 3769407
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattactt 520  Q
    |||||||||||||| |  |||||||||||||||||||||| | ||||| | |||||||||||||    
T  3769344 aaagtttgtgtaatcatttgaattgaaaattgaaaacttttaaattttgaaagaataattactt 3769407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 31644808 - 31644757
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    |||||||||||  |||||| |||||||| |||||||||||||||||||||||    
T  31644808 ggcaaattctatcgtacactcaacatatttgagtgtaccggtacaccaaccc 31644757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 9661752 - 9661798
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  9661752 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacc 9661798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 14872734 - 14872685
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  14872734 taggcaaattctatggtacacccaacatct-tgagtgtaccggtacaccaa 14872685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 526
Target Start/End: Complemental strand, 10364807 - 10364754
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    |||| |||| |||||||||||||| | ||||||| |||||||||||||||||||    
T  10364807 agtgcattgtaaattgaaaactttgatatttttaaagaataattacttaattta 10364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 536
Target Start/End: Original strand, 13445783 - 13445836
Alignment:
Q  483 aaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||  ||||||||    
T  13445783 aaattgaaaactttcacatttttaaagaatacttacttaatttagcatgcttaa 13445836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 7344722 - 7344675
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  7344722 ggcaaattctatggtacacccaaca-atttgagtgtaccggtacaccaa 7344675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 12782652 - 12782695
Alignment:
Q  95 gcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||    
T  12782652 gcaaattctacggtacatccaacatatttgagtgtatcggtaca 12782695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 4509430 - 4509476
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| |||||||| || |||| ||||||||||||||||||    
T  4509430 ggcaaattctatggtacacctaatatatttgagtgtaccggtacacc 4509476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 8549961 - 8549916
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  8549961 ggcaaattctatggtacacccaatatatttgagtgtatcggtacac 8549916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 16892902 - 16892951
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||||||| || | ||||||||||||| ||||||    
T  16892902 aggcaaattctatggtacacccaaaatttttgagtgtaccggtgcaccaa 16892951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 22755241 - 22755286
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| | ||||||||| |||| |||||||||||||||||    
T  22755241 ggcaaattctatgatacacccaatatatttgagtgtaccggtacac 22755286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 31644688 - 31644647
Alignment:
Q  211 tgattaaatcctattcattaaaagtgtaaccgaaataatttt 252  Q
    |||||||||| ||||||| |||||||||| ||||||||||||    
T  31644688 tgattaaatcttattcatcaaaagtgtaaacgaaataatttt 31644647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 541
Target Start/End: Original strand, 25036991 - 25037075
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaagaaat 541  Q
    |||||||||| ||||||||| |||||||||| |||| ||| || |||||| | ||||||||||||||||||||||||||| ||||    
T  25036991 aaagtttgtgcaataaagtgcattgaaaattaaaaattttgacctttttaaataataattacttaatttaaaatgcttaaaaaat 25037075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 41742580 - 41742632
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41742580 aggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaccc 41742632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 536
Target Start/End: Original strand, 43492227 - 43492307
Alignment:
Q  456 taaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||||||||||| |||| |||||| ||| ||| |||||| || ||||||||||||||||||| |||||||||    
T  43492227 taaagtttgtgtaataaagtgcattggaaattgtaaattttgacatttctaaagaataattacttaatttagaatgcttaa 43492307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 526
Target Start/End: Complemental strand, 8238029 - 8237961
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    |||||||||||||| | ||| |||||||| |||||||||| ||||||||| |||||||||||||||||||    
T  8238029 aaagtttgtgtaatca-gtgcattgaaaaatgaaaactttgacatttttaaagaataattacttaattta 8237961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 16087347 - 16087298
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaac 143  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  16087347 ggcaaattctacggtacacctaacatatttgagtgtaccggtacaccaac 16087298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 43631458 - 43631405
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  43631458 taggcaaattctatggtacacctaacatatttgagtgtaccggtacaccaaccc 43631405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 23608399 - 23608347
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||    
T  23608399 aggcaaattctacggtacacccaacatatttgagtgtactggtacactaaccc 23608347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 29682034 - 29682093
Alignment:
Q  84 tatatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaac 143  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||| ||||    
T  29682034 tatatatataggcaaattctacggtacatccaacatatttgagtgtatcggtacatcaac 29682093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 465 - 536
Target Start/End: Complemental strand, 38362327 - 38362256
Alignment:
Q  465 tgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||| |  ||||||||||||||||||||| |||||||  |||||||||  |||||||||||||||||    
T  38362327 tgtaataaaatacattgaaaattgaaaactttaatatttttaatgaataattatctaatttaaaatgcttaa 38362256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 44452068 - 44452147
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||||||| |||| |||||||||  ||| | ||||||| | ||||||||||||||||| |||| ||||    
T  44452068 aaagtttgtgtaataaagtgcattggaaattgaaacttttgatatttttaaataataattacttaatttagaatgtttaa 44452147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 17020070 - 17020122
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  17020070 taggcaaattctactgtacaccca-catatttgagtgtaccggtacaccaaccc 17020122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 1343011 - 1343066
Alignment:
Q  86 tatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  1343011 tatatataggcaaattctatggtacacccaaca-atttgagtgtaccggtacaccaa 1343066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 2290794 - 2290838
Alignment:
Q  98 aattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  2290794 aattctatggtacacccaacatatttgagtgtaccggtacaccaa 2290838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 15591384 - 15591431
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacca 141  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  15591384 ggcaaattctaccgtacacccaacatatttgagtgtaccagtacacca 15591431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 473 - 536
Target Start/End: Complemental strand, 19620056 - 19619993
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| |||| |||||||||||||| ||||||||| ||||||||| |||||||||  ||||||||    
T  19620056 agtgcattggaaattgaaaactttgacatttttaaagaataatttcttaatttagcatgcttaa 19619993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 31498656 - 31498734
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||| ||| || || ||||||||||||||||||||||||||| | | |||| |||||||||||| |||| ||||    
T  31498656 aaagtttgtgcaatcaa-tgtattgaaaattgaaaactttaacattttaaaaaaatatttacttaatttagaatgtttaa 31498734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 465 - 536
Target Start/End: Complemental strand, 38988778 - 38988707
Alignment:
Q  465 tgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||| |||| ||||| || ||||||||||| ||| | ||| |||||||||||||||| ||||||    
T  38988778 tgtaataaagtgcattggaaattaaacactttaacattattaaaaaattattacttaatttaaaaagcttaa 38988707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 458 - 536
Target Start/End: Original strand, 37135459 - 37135537
Alignment:
Q  458 aagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||| ||||||| |||||||||| |||  ||| | ||||||| | ||||||||||||||||| ||| |||||    
T  37135459 aagtttgtgtagtaaagtgtattgaaaattaaaacttttgatatttttaaataataattacttaatttataatacttaa 37135537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 11640295 - 11640342
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  11640295 ggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 11640342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 39558595 - 39558651
Alignment:
Q  84 tatatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||| ||||||||||||| ||||||||||  |||| | ||||||||||||||||    
T  39558595 tatatatataggcaaattctatggtacacccactatatttaagtgtaccggtacacc 39558651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 536
Target Start/End: Original strand, 41150068 - 41150120
Alignment:
Q  484 aattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||| |||||||| ||||| |||||||||||||||||||  ||||||||    
T  41150068 aattgaaatctttaacacttttaaagaataattacttaatttatgatgcttaa 41150120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 3267637 - 3267715
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | ||| ||||||||| ||||||||| | ||||| | ||||||||||||| |||||  ||||||||    
T  3267637 aaagtttgtgtaatga-gtgcattgaaaatggaaaacttttaaattttaaaagaataattactttatttagcatgcttaa 3267715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 5583271 - 5583228
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggta 136  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||    
T  5583271 aggcaaattctatggtacacccaatatatttgagtgtaccggta 5583228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 15715903 - 15715950
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    |||||||||||| ||||||||||  |||| ||||||||||||||||||    
T  15715903 aggcaaattctatggtacacccactatatttgagtgtaccggtacacc 15715950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 24953337 - 24953290
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||||| ||||||||||  |||| |||||||||||||||||    
T  24953337 taggcaaattctatggtacacccactatatttgagtgtaccggtacac 24953290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 26872811 - 26872906
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaagaaatatcggagcact 552  Q
    ||||||||| ||||||| || |||| |||||||||  ||| | |||| || | ||||||||||| ||||| ||||||||| || | ||||||||||    
T  26872811 aaagtttgtataataaaatgcattggaaattgaaacttttgatatttataaataataattacttgatttagaatgcttaaaaagtgtcggagcact 26872906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 34299770 - 34299848
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | |||  ||| |||||||||||||| ||||||||| ||||||||| |||||| ||  ||||||||    
T  34299770 aaagtttgtgtaatca-gtgctttgtaaattgaaaactttgacatttttaaagaataattgcttaatctagcatgcttaa 34299848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 35357699 - 35357746
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||||| |||||| |||| |||| |||||||||||||||||    
T  35357699 taggcaaattctatggtacatccaatatatttgagtgtaccggtacac 35357746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 41771817 - 41771770
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||| || ||||||||||| |||| |||||||||||||||||    
T  41771817 taggcaaattttatggtacacccaatatatttgagtgtaccggtacac 41771770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 46716258 - 46716180
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||| |||| || || |||||| |||||||||||| | ||||||| |||||||||| |||||||| |||| ||||    
T  46716258 aaagtttgtataattaa-tgcattgaacattgaaaactttgatatttttaaagaataattatttaatttagaatggttaa 46716180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 142
Target Start/End: Complemental strand, 27897629 - 27897580
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||| |||||||| ||||| | ||||||||||||||||||||    
T  27897629 taggcaaattctatggtacacctaacattt-tgagtgtaccggtacaccaa 27897580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 482 - 536
Target Start/End: Original strand, 39316344 - 39316398
Alignment:
Q  482 aaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||| ||| ||||| ||  |||||||||||||||||||| ||||||||    
T  39316344 aaaattgaaaattttgacattattgaagaataattacttaatttaatatgcttaa 39316398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 47369627 - 47369581
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||| ||||||||||| |||| ||||||||||| |||||    
T  47369627 aggcaaattctatggtacacccaatatatttgagtgtaccgatacac 47369581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 6791844 - 6791799
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  6791844 ggcaaattctatggtacacccaatatatttgagtgtatcggtacac 6791799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 526
Target Start/End: Original strand, 24610865 - 24610933
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    |||||||||||||| | |||||||  ||||| |||||||||||||||| | |||||||||  ||||||||    
T  24610865 aaagtttgtgtaatta-gtgaattagaaattcaaaactttaacattttaaaagaataattgtttaattta 24610933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 41311053 - 41311101
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||| |||||| | ||||||||||||||||||||    
T  41311053 aggcaaattctatggtacactcaacattt-tgagtgtaccggtacaccaa 41311101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 5e-18; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 461 - 536
Target Start/End: Original strand, 17774312 - 17774387
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||||| |||| |||||||||| ||| | ||||||| ||||||||||||| |||||||||||||||    
T  17774312 tttgtgtaataaagtgtattggaaattgaaaaatttgatatttttaaagaataattacttgatttaaaatgcttaa 17774387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 10401098 - 10401050
Alignment:
Q  96 caaattctacggtacacccaacatatctgagtgtaccggtacaccaacc 144  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10401098 caaattctacggtacacccaacatatttgagtgtaccggtacaccaacc 10401050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 457 - 519
Target Start/End: Complemental strand, 28639632 - 28639570
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattact 519  Q
    |||||||||||||||||||| |||| ||  |||||||||||||||||||| ||||||||||||    
T  28639632 aaagtttgtgtaataaagtgcattggaagctgaaaactttaacatttttaaagaataattact 28639570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 10568876 - 10568829
Alignment:
Q  95 gcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  10568876 gcaaattctacggtacacccaacatatttgagtgcaccggtacaccaa 10568829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 25767551 - 25767630
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| ||||| |||||||||  |||||||||||| ||||||||||||||| ||||  |||| ||||||||||| ||||||    
T  25767551 aaagattgtgcaataaagtgttttgaaaattgaacactttaacatttttaaagaaatattatttaatttaaaaagcttaa 25767630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 24432199 - 24432150
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||||||||||||||||||| |||||||| || ||||||||    
T  24432199 aggcaaattctacggtacacccaacatatttgagtgtatcgatacaccaa 24432150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 529
Target Start/End: Complemental strand, 43000829 - 43000757
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaa 529  Q
    ||||||||| | | |||||| |||||||||| |||| ||| ||||||||| ||||||||||||| ||||||||    
T  43000829 aaagtttgtttgacaaagtgcattgaaaattaaaaattttgacatttttaaagaataattactttatttaaaa 43000757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 461 - 536
Target Start/End: Original strand, 14309118 - 14309192
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||| || || |||| |||||||||||||| | ||||||| ||||||| |||||||||||| ||||||||    
T  14309118 tttgtgtaattaa-tgcattggaaattgaaaactttgatatttttaaagaataactacttaatttaatatgcttaa 14309192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 473 - 536
Target Start/End: Original strand, 41568709 - 41568772
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| ||||||||||||||||||| ||||||||  |||||||| ||||||||||  ||||||||    
T  41568709 agtgcattgaaaattgaaaactttgacatttttgaagaataataacttaatttagtatgcttaa 41568772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 19238792 - 19238841
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  19238792 taggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 19238841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 527
Target Start/End: Original strand, 26686679 - 26686748
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaa 527  Q
    ||||||||||||||  | || |||||||||| |||||||| ||||||||| |||||| |||||||||||||    
T  26686679 aaagtttgtgtaatcga-tgtattgaaaattaaaaacttttacatttttaaagaatacttacttaatttaa 26686748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 527
Target Start/End: Original strand, 26956410 - 26956479
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaa 527  Q
    ||||||||||||||  | || |||||||||| |||||||| ||||||||| |||||| |||||||||||||    
T  26956410 aaagtttgtgtaatcga-tgtattgaaaattaaaaacttttacatttttaaagaatacttacttaatttaa 26956479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 32993734 - 32993688
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||    
T  32993734 aggcaaattctatggtacacccaatatatttgagtgtaccggtacac 32993688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 1446122 - 1446077
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||    
T  1446122 aaattctacggtacacccaacatatttgagtgtatcgatacaccaa 1446077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 36339253 - 36339208
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||    
T  36339253 ggcaaattctatggtacacccaatatatttgagtgtaccggtacac 36339208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 6335390 - 6335437
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  6335390 ggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 6335437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 457 - 537
Target Start/End: Complemental strand, 12448750 - 12448671
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaag 537  Q
    |||||||||||||| |  || ||||||||||||||  |||||| ||||||| |||||||| |||| |||||||| ||||||    
T  12448750 aaagtttgtgtaatcat-tgcattgaaaattgaaatatttaacttttttattgaataatttcttattttaaaatccttaag 12448671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 13645915 - 13645871
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||    
T  13645915 ggcaaattctaccgtacactcaacatatttgagtgtaccggtaca 13645871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 16602769 - 16602722
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  16602769 ggcaaattctatggtacacccaacat-tttgagtgtaccggtacaccaa 16602722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 9910451 - 9910404
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||||| ||||||||||  |||| |||||||||||||||||    
T  9910451 taggcaaattctatggtacacccactatatttgagtgtaccggtacac 9910404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 17068994 - 17069037
Alignment:
Q  95 gcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||    
T  17068994 gcaaattctactgtacatccaacatatttgagtgtaccggtaca 17069037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 27325866 - 27325917
Alignment:
Q  473 agtgaattgaaaattgaaaactttaacatttttatagaataattacttaatt 524  Q
    |||| ||||||||||||||| ||| ||||||||| ||||||||||| |||||    
T  27325866 agtgcattgaaaattgaaaagtttgacatttttaaagaataattacctaatt 27325917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 33210372 - 33210415
Alignment:
Q  96 caaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||    
T  33210372 caaattctatggtacacccaatatatttgagtgtaccggtacac 33210415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 36609158 - 36609236
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | ||  ||||||||||||||||||| | ||||||  |||||||||| |||||||| |||| ||||    
T  36609158 aaagtttgtgtaatta-gtacattgaaaattgaaaactttgatatttttgaagaataattatttaatttagaatgtttaa 36609236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 2271187 - 2271133
Alignment:
Q  93 aggcaaattctacgg-tacacccaacatatct-gagtgtaccggtacaccaaccc 145  Q
    ||||||||||||||| ||||||||||||| || |||||||||||||||| |||||    
T  2271187 aggcaaattctacggatacacccaacataacttgagtgtaccggtacactaaccc 2271133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 142
Target Start/End: Complemental strand, 22798487 - 22798429
Alignment:
Q  84 tatatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||| ||||||||||||| ||||||||||| | || || ||||| |||||||||||    
T  22798487 tatatatataggcaaattctatggtacacccaataaatttgggtgtatcggtacaccaa 22798429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 536
Target Start/End: Complemental strand, 26432321 - 26432263
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| |||||||||| ||||  ||||| | | |||||||||||||||||||||||||||    
T  26432321 attggaaattgaaaagtttattattttaaaaaaataattacttaatttaaaatgcttaa 26432263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 536
Target Start/End: Original strand, 26453688 - 26453745
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||||| ||| ||||||||| | ||| |||||||||||||||||| ||||    
T  26453688 attgaaaattgaaaagtttgacatttttaaaaaat-attacttaatttaaaatgtttaa 26453745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 33678154 - 33678200
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||| ||||||||||  |||| |||||||||||||||||    
T  33678154 aggcaaattctatggtacacccactatatttgagtgtaccggtacac 33678200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 482 - 536
Target Start/End: Complemental strand, 39335724 - 39335671
Alignment:
Q  482 aaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||| ||||||||| |||||||| |||||||||| ||||||||||||| ||||    
T  39335724 aaaattaaaaacttta-catttttaaagaataattatttaatttaaaatgtttaa 39335671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 2011465 - 2011417
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||| |||||| | ||||||||||||||||||||    
T  2011465 aggcaaattctatggtacactcaacattt-tgagtgtaccggtacaccaa 2011417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 2021680 - 2021728
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||||||| |||| ||||||||||| ||||||||    
T  2021680 aggcaaattctatggtacacccaa-atatttgagtgtaccgatacaccaa 2021728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 17069113 - 17069154
Alignment:
Q  211 tgattaaatcctattcattaaaagtgtaaccgaaataatttt 252  Q
    |||||||||| ||||||| |||||||||| ||||||||||||    
T  17069113 tgattaaatcttattcatcaaaagtgtaaacgaaataatttt 17069154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 32455301 - 32455346
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    ||||||||| ||| | ||||||||||||| ||||||||||||||||    
T  32455301 aggcaaattttaccgcacacccaacatatttgagtgtaccggtaca 32455346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 536
Target Start/End: Original strand, 34032142 - 34032195
Alignment:
Q  483 aaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||  |||||| |||||| |||||||||||||| |||| |||||||||    
T  34032142 aaattgaaatatttaacttttttaaagaataattacttattttagaatgcttaa 34032195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 36155848 - 36155901
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    |||||||||||||| | ||||||||||||| |||||||| |||| || ||||||    
T  36155848 taggcaaattctacaggacacccaacatatttgagtgtatcggtgcatcaaccc 36155901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 36155970 - 36156011
Alignment:
Q  211 tgattaaatcctattcattaaaagtgtaaccgaaataatttt 252  Q
    |||||||||| ||||||| |||||||||| ||||||||||||    
T  36155970 tgattaaatcttattcatcaaaagtgtaaacgaaataatttt 36156011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 38355120 - 38355075
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||| ||||||||||| ||||||| ||||||||| ||||||||||    
T  38355120 aaattatacggtacacctaacatatttgagtgtactggtacaccaa 38355075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 5e-18; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 12962072 - 12962021
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12962072 ggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaccc 12962021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 431660 - 431726
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaat 523  Q
    ||||||||||||| |||||| |||| |||||||||| ||||||||||||| ||||||||||||||||    
T  431660 aaagtttgtgtaaaaaagtgcattggaaattgaaaattttaacatttttaaagaataattacttaat 431726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 461 - 536
Target Start/End: Original strand, 9049181 - 9049255
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||| || || ||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||    
T  9049181 tttgtgtaattaa-tgcattgaaaattgaaaaatttaacattttaaaagaataattacttaatttaacatgcttaa 9049255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 12762898 - 12762976
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    ||||||||||||| | |||| |||| |||||||||| ||||||||||||  |||||||||||||||||| ||||||||||    
T  12762898 aaagtttgtgtaa-acagtgcattggaaattgaaaattttaacattttttaagaataattacttaattttaaatgcttaa 12762976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 45264086 - 45264039
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtacaccaacc 144  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  45264086 aaattctacggtacacccaacatatttgagtgtaccggtacatcaacc 45264039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 478 - 530
Target Start/End: Original strand, 37284933 - 37284985
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaat 530  Q
    ||||||||||||||| ||||| ||||||| | |||||||||||||||||||||    
T  37284933 attgaaaattgaaaaatttaagatttttaaaaaataattacttaatttaaaat 37284985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 12848499 - 12848577
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | ||| | || |||||||||||||| ||||| ||| |||||| ||||||||||||| ||||||||    
T  12848499 aaagtttgtgtaatta-gtgcaatggaaattgaaaactttgacattattaaagaatagttacttaatttaatatgcttaa 12848577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 45157530 - 45157576
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  45157530 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacc 45157576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 1580648 - 1580603
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||    
T  1580648 ggcaaattctatggtacacccaatatatttgagtgtaccggtacac 1580603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 530
Target Start/End: Original strand, 3666465 - 3666537
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaat 530  Q
    ||||||| |||||| || || ||||| |||| |||| ||||| ||||||| |||||||||||||||||||||||    
T  3666465 aaagtttatgtaatcaa-tgtattgagaattaaaaattttaatatttttaaagaataattacttaatttaaaat 3666537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 531
Target Start/End: Complemental strand, 8087010 - 8086961
Alignment:
Q  482 aaaattgaaaactttaacatttttatagaataattacttaatttaaaatg 531  Q
    ||||||||||| ||||||||||||| | |||||||| |||||||||||||    
T  8087010 aaaattgaaaagtttaacatttttaaaaaataattatttaatttaaaatg 8086961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 11088215 - 11088263
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  11088215 aggcaaattctatggtacacccaa-atatttgagtgtaccggtacaccaa 11088263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 461 - 530
Target Start/End: Complemental strand, 12205595 - 12205526
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaat 530  Q
    |||||||||||| ||| |||| |||| ||||||||| | |||| || | |||||||||||||||||||||    
T  12205595 tttgtgtaataatgtgcattgcaaatggaaaactttgatatttataaaaaataattacttaatttaaaat 12205526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 467 - 536
Target Start/End: Complemental strand, 28858173 - 28858105
Alignment:
Q  467 taataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||  |||||||||| |||| ||| ||||||||| |||||| |||||||||||| |||||||||    
T  28858173 taataaagtatattgaaaattaaaaa-tttgacatttttaaagaatatttacttaatttagaatgcttaa 28858105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 478 - 534
Target Start/End: Original strand, 30822767 - 30822823
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgctt 534  Q
    |||| |||||||||||||| ||||||| | | |||||||||||||||||||| ||||    
T  30822767 attggaaattgaaaactttgacattttcaaaaaataattacttaatttaaaaagctt 30822823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 35896821 - 35896773
Alignment:
Q  92 taggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||||| ||||||| ||| |||| ||||||||||||||||||    
T  35896821 taggcaaattctatggtacactcaatatatttgagtgtaccggtacacc 35896773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 42849744 - 42849688
Alignment:
Q  84 tatatatgtaggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||| ||||||||||||| |||||| |||| |||| ||||||||||| ||||||    
T  42849744 tatatatataggcaaattctatggtacatccaatatatttgagtgtaccgatacacc 42849688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 530
Target Start/End: Complemental strand, 3191129 - 3191078
Alignment:
Q  479 ttgaaaattgaaaactttaacatttttatagaataattacttaatttaaaat 530  Q
    |||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||    
T  3191129 ttgaaaattgaaaaatttaatatttttaaagactaattatttaatttaaaat 3191078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 536
Target Start/End: Complemental strand, 8964467 - 8964393
Alignment:
Q  461 tttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||| || || |||| |||||||||  ||| || |||||| ||||||||||||||||||| |||||||||    
T  8964467 tttgtgtaatcaa-tgcattggaaattgaaatattttacttttttaaagaataattacttaatttagaatgcttaa 8964393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 536
Target Start/End: Original strand, 24389650 - 24389728
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | | | |||| |||||||||||||| |||| || | |||||||||||||||||||  ||||||||    
T  24389650 aaagtttgtgtaatca-gcgcattggaaattgaaaactttgacatcttaaaagaataattacttaatttagcatgcttaa 24389728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 25627027 - 25626949
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||| ||||||| || || |||| |||| ||||||||||| ||||||| |||||||||| |||||||| ||| |||||    
T  25627027 aaagttggtgtaatcaa-tgtattggaaatcgaaaactttaaaatttttaaagaataattatttaatttagaatacttaa 25626949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 526
Target Start/End: Original strand, 33068595 - 33068638
Alignment:
Q  483 aaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    |||||||||||||| ||||||||| | |||||||||||||||||    
T  33068595 aaattgaaaactttcacatttttaaaaaataattacttaattta 33068638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 33493929 - 33493972
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggta 136  Q
    |||||||||||||||||||| |||||||| |||||||| |||||    
T  33493929 aggcaaattctacggtacacacaacatatttgagtgtatcggta 33493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 529
Target Start/End: Complemental strand, 40874874 - 40874823
Alignment:
Q  479 ttgaaaattgaaaac-tttaacatttttatagaataattacttaatttaaaa 529  Q
    ||||||||||||||  ||||||||||||| | ||||||||||||||||||||    
T  40874874 ttgaaaattgaaaaagtttaacatttttaaaaaataattacttaatttaaaa 40874823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 480 - 530
Target Start/End: Complemental strand, 3191217 - 3191167
Alignment:
Q  480 tgaaaattgaaaactttaacatttttatagaataattacttaatttaaaat 530  Q
    ||||||||||||| ||||| ||||||| ||| |||||| ||||||||||||    
T  3191217 tgaaaattgaaaaatttaatatttttaaagactaattatttaatttaaaat 3191167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 6945340 - 6945386
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| |||||| |||| |||| ||||||||||||||||||    
T  6945340 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacc 6945386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 536
Target Start/End: Complemental strand, 33455027 - 33454969
Alignment:
Q  478 attgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||| |||||||||||||| ||||||||| |||||| || |||||||||  ||||||||    
T  33455027 attgtaaattgaaaactttgacatttttaaagaatagtttcttaatttagcatgcttaa 33454969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 40947171 - 40947125
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||| ||| ||||||| |||| |||||||||||||||||    
T  40947171 aggcaaattctatggtgcacccaatatatttgagtgtaccggtacac 40947125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 4108306 - 4108354
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| |||||| ||||||| | ||||||||||||||||||||    
T  4108306 aggcaaattctatggtacatccaacattt-tgagtgtaccggtacaccaa 4108354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 526
Target Start/End: Complemental strand, 11385532 - 11385463
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||||||| |||||||| |||| |||| ||||| ||| | | ||||| ||||||||||||| |||||    
T  11385532 aaagtttgtgttataaagtgtattggaaatagaaaaatttgataattttaaagaataattacttgattta 11385463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 33429132 - 33429180
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| ||||||| |||||| | ||||||||||||||||||||    
T  33429132 aggcaaattctatggtacactcaacattt-tgagtgtaccggtacaccaa 33429180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 33493476 - 33493525
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||||  ||||||||| |||| ||||||||||| ||||||||    
T  33493476 aggcaaattctactatacacccaatatatttgagtgtaccgatacaccaa 33493525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 40495465 - 40495510
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    |||||||||||||| |||||||  |||| |||||||||||||||||    
T  40495465 ggcaaattctacggcacacccactatatttgagtgtaccggtacac 40495510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 245 - 194
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaaccc 145  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  245 ggcaaattctatggtacacccaacatatttgagtgtaccggtacaccaaccc 194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 482 - 526
Target Start/End: Complemental strand, 19622 - 19578
Alignment:
Q  482 aaaattgaaaactttaacatttttatagaataattacttaattta 526  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  19622 aaaattgaaaactttaacatttttaaagaataattacttaattta 19578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 536
Target Start/End: Complemental strand, 26780 - 26702
Alignment:
Q  457 aaagtttgtgtaataaagtgaattgaaaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| | ||| ||||||||||||||||||| ||||||| | | |||||||||||||||||  ||||||||    
T  26780 aaagtttgtgtaatca-gtgcattgaaaattgaaaactttgacattttaaaataataattacttaatttagcatgcttaa 26702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 483 - 536
Target Start/End: Complemental strand, 5816 - 5763
Alignment:
Q  483 aaattgaaaactttaacatttttatagaataattacttaatttaaaatgcttaa 536  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||| |||||    
T  5816 aaattgaaaactttgacatttttaaagaaaaattacttaatttaaaattcttaa 5763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 32566 - 32610
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtaca 138  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||    
T  32566 ggcaaattctaccgtacacccaacatatttgagtgtaccggtaca 32610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 45110 - 45155
Alignment:
Q  97 aaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||    
T  45110 aaattctaccgtacacccaacatatatgagtgtaccagtacaccaa 45155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 3436 - 3390
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacacc 140  Q
    ||||||||||| ||||||||||| |||| |||||||||| |||||||    
T  3436 ggcaaattctatggtacacccaatatatttgagtgtaccagtacacc 3390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0648 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 1278 - 1326
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| |||||||| ||||| | ||||||||||||||||||||    
T  1278 aggcaaattctatggtacacctaacat-tatgagtgtaccggtacaccaa 1326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 15658 - 15706
Alignment:
Q  93 aggcaaattctacggtacacccaacatatctgagtgtaccggtacaccaa 142  Q
    |||||||||||| |||||||| ||||| | ||||||||||||||||||||    
T  15658 aggcaaattctatggtacacctaacat-tatgagtgtaccggtacaccaa 15706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 16989 - 16944
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  16989 ggcaaattctatggtacacccaatatatttgagtgtatcggtacac 16944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 55855 - 55900
Alignment:
Q  94 ggcaaattctacggtacacccaacatatctgagtgtaccggtacac 139  Q
    ||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  55855 ggcaaattctatggtacacccaatatatttgagtgtatcggtacac 55900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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