View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5614_low_9 (Length: 258)
Name: NF5614_low_9
Description: NF5614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5614_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 52429069 - 52429294
Alignment:
| Q |
1 |
aacttctctgctaactcagtattacttctccnnnnnnncaaactagtactttctgcttcttgcacctccttttccataacagaaccactggaattttgct |
100 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52429069 |
aacttctctgctaactcagtattacttctccttttcttcaaactagtactttctgcttcttgcacctccttttccataacagaaccactggaattttgct |
52429168 |
T |
|
| Q |
101 |
gcaaaggcttctcattttctttgtcttcagaaacatcagattcagaatgaaactgtgattgttgtttagggctttctgccacgtgccaaggagataaacg |
200 |
Q |
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| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52429169 |
gtaacggcttctcattttcttcgtcttcagaaacatcagattcagaatgaaactgtgattgttgtttagggctttctgccacgtgccaaggagataaacg |
52429268 |
T |
|
| Q |
201 |
ctttggaaactcaaaattcacaggtt |
226 |
Q |
| |
|
|||||||||||||||||||| ||||| |
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|
| T |
52429269 |
ctttggaaactcaaaattcagaggtt |
52429294 |
T |
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