View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5616-Insertion-10 (Length: 539)
Name: NF5616-Insertion-10
Description: NF5616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5616-Insertion-10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 368; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 38 - 539
Target Start/End: Complemental strand, 32815246 - 32814747
Alignment:
| Q |
38 |
ataataatttacaatttctacaattctgcgggggtaattgtgaagacttattttcctttgcaagcaccagattttacatgtctaagtttttacgagtaag |
137 |
Q |
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| T |
32815246 |
ataataatttacaatttctacaattctgccaaattaattgtgaagacttattttcctttgcaagcaccagattttacatgtctaagtttttacgagtaag |
32815147 |
T |
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| Q |
138 |
attgataatgtttaatgtttaggttgcaaagtggtttgatttagagtatagacagatagaagttcaaaagataattcaaatactttcaattcgttgtggt |
237 |
Q |
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| T |
32815146 |
attgataatgtttaatgtttaggttgcaaagtggtttgatttatagtatagacagatagaagttcaaaagataatgcaaatactttcaattcgttgtggt |
32815047 |
T |
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| Q |
238 |
ttcctattatgtgttattgagctatgtactttagattgaaggtgtgttcaatgtccaatacatcggtgtttgacatgatcttaaatcatttgttaggtgt |
337 |
Q |
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| T |
32815046 |
ttcatattatgtgttattgagctatgtactttagattgaaggtgtgttcaatgtccaatacatcggtgtttgacatgatcttaaatcatttgttaggtgt |
32814947 |
T |
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| Q |
338 |
ctttgatagtgtttcatagatattgagctataggatgtttcaatgtatttgtgtgtcctgctttatgtaagtgatgcttgggtttct-aatgtaaaaatt |
436 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| |||| |||||| |
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| T |
32814946 |
ctttgatagtgtttcatagttattgagctataggatgtttcaatgtatttgtgtgtcctgctttatgtagataatgctttggtttctggatgt-aaaatt |
32814848 |
T |
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| Q |
437 |
tgtgtttgtaggatctgaagcaaaactaacaaatgggctgaataacttaggttgatc-gagtctttgctcgtaagttgtctatcc-gataactatggttt |
534 |
Q |
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| T |
32814847 |
tgtgtttgtttgtt----agcaaaactaacaaatgggctgaataacttaggttgatcggattctttactcatcagttgtctatccacataactatggttt |
32814752 |
T |
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