View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5616_low_14 (Length: 392)
Name: NF5616_low_14
Description: NF5616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5616_low_14 |
 |  |
|
| [»] chr2 (16 HSPs) |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 332; Significance: 0; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 1 - 392
Target Start/End: Original strand, 32310367 - 32310758
Alignment:
| Q |
1 |
ggctgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggccaaactgtcctggaaacagtaagaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
32310367 |
ggctgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggctaaactgtcctgacaacagtaagaacaa |
32310466 |
T |
 |
| Q |
101 |
tatcagctgcaacggcacgttttcgacgtttacagcttcaaagccaacgaatgttcatcactctaataacaaagggatgtcatacatgcaagcattgtca |
200 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
32310467 |
tttcagcagcaacggcacgttttcgtcgtttacagcttcaaagccaatgaacgttcatcactctaatgacaaagggatgtcatacatgcaagcattgtca |
32310566 |
T |
 |
| Q |
201 |
tctgcagtgccatctggagcatctttcgacactcactgctatcatagtttgttgagaggaagagggttattgtttgctgatcaactgctgatggctcaag |
300 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
32310567 |
tctgcagtgccatctggagcatcttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatggctcaag |
32310666 |
T |
 |
| Q |
301 |
agaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcagatggatttcgcaagggttatgtcgaaattgtctaac |
392 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32310667 |
agaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaac |
32310758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 4 - 392
Target Start/End: Complemental strand, 32814113 - 32813725
Alignment:
| Q |
4 |
tgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggccaaactgtcctggaaacagtaagaacaatat |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |
|
|
| T |
32814113 |
tgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggctaaactgtcctgacaacagtaagaacaattt |
32814014 |
T |
 |
| Q |
104 |
cagctgcaacggcacgttttcgacgtttacagcttcaaagccaacgaatgttcatcactctaataacaaagggatgtcatacatgcaagcattgtcatct |
203 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
32814013 |
cagcagcaacggcacgttttcgacgtttacagcttcaaagccaatgaatgttcaactctctaatgacaaagggatgtcatacatgcaagcattgtcatct |
32813914 |
T |
 |
| Q |
204 |
gcagtgccatctggagcatctttcgacactcactgctatcatagtttgttgagaggaagagggttattgtttgctgatcaactgctgatggctcaagaga |
303 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
32813913 |
gcagtaccatctggagcatcttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatggctcaagaga |
32813814 |
T |
 |
| Q |
304 |
agactgccagattggtttctgcttatgcttcagatgacggatcaacctttcagatggatttcgcaagggttatgtcgaaattgtctaac |
392 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32813813 |
agactgccagattggtttttgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaac |
32813725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 4 - 392
Target Start/End: Complemental strand, 32564450 - 32564062
Alignment:
| Q |
4 |
tgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggccaaactgtcctggaaacagtaagaacaatat |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |
|
|
| T |
32564450 |
tgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggctaaactgtcctgacaacagtaagaacaattt |
32564351 |
T |
 |
| Q |
104 |
cagctgcaacggcacgttttcgacgtttacagcttcaaagccaacgaatgttcatcactctaataacaaagggatgtcatacatgcaagcattgtcatct |
203 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
32564350 |
cagcagcaacggcacgttttcgtcgtttacagcttcaaagccaatgaacgttcatcactctaatgacaaagggatgtcatacatgcaagcattgtcatct |
32564251 |
T |
 |
| Q |
204 |
gcagtgccatctggagcatctttcgacactcactgctatcatagtttgttgagaggaagagggttattgtttgctgatcaactgctgatggctcaagaga |
303 |
Q |
| |
|
||||| ||||||||||||| ||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
32564250 |
gcagttccatctggagcattttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatggctcaagaga |
32564151 |
T |
 |
| Q |
304 |
agactgccagattggtttctgcttatgcttcagatgacggatcaacctttcagatggatttcgcaagggttatgtcgaaattgtctaac |
392 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32564150 |
agactgccagattggtttctgcttatgcttcagatgacggatctacctttcggatggatttcgcaagggttatgttgaaattgtctaac |
32564062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 1 - 392
Target Start/End: Complemental strand, 32786908 - 32786514
Alignment:
| Q |
1 |
ggctgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggccaaactgtcctggaaacagtaagaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || |
|
|
| T |
32786908 |
ggctgtacgactttcaaggaacagggcaaccagacccaagtatacctctcgattttctcagtcagatgaggctaaactgtcctgacaacagtaagaataa |
32786809 |
T |
 |
| Q |
101 |
tatcagctgcaacggcacgttttcgacgtttacagcttcaaagccaacgaatgttcatcactctaata---acaaagggatgtcatacatgcaagcattg |
197 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
32786808 |
tatcagcagcaacggcacgttttcgacgtttacaatttcaaagaaaatgaatgttcatcactctagtagtgacaaagggatgtcatacatgcaagcattg |
32786709 |
T |
 |
| Q |
198 |
tcatctgcagtgccatctggagcatctttcgacactcactgctatcatagtttgttgagaggaagagggttattgtttgctgatcaactgctgatggctc |
297 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
32786708 |
tcatctgcagtgccatctggagcatcttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatggctc |
32786609 |
T |
 |
| Q |
298 |
aagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcagatggatttcgcaagggttatgtcgaaattgtctaac |
392 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32786608 |
aagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaac |
32786514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 392
Target Start/End: Original strand, 28221815 - 28222206
Alignment:
| Q |
1 |
ggctgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggccaaactgtcctggaaacagtaagaacaa |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||||| || |
|
|
| T |
28221815 |
ggctctacgactttcaaggaacagggcaaccagacccgagtatacctctcgatttcctcagtcagatgaggcaaaactgtcctgacaacaataagaataa |
28221914 |
T |
 |
| Q |
101 |
tatcagctgcaacggcacgttttcgacgtttacagcttcaaagccaacgaatgttcatcactctaataacaaagggatgtcatacatgcaagcattgtca |
200 |
Q |
| |
|
| ||| | ||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
28221915 |
tgtcatcagcaacggaatgttttcgacgtttacagtttcaaagccaatgaatgttcatcactctaataacaaagggatgtcatacaagcaagcattgtca |
28222014 |
T |
 |
| Q |
201 |
tctgcagtgccatctggagcatctttcgacactcactgctatcatagtttgttgagaggaagagggttattgtttgctgatcaactgctgatggctcaag |
300 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
28222015 |
tctgcagtgtcatctggagcatcttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatggcttaag |
28222114 |
T |
 |
| Q |
301 |
agaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcagatggatttcgcaagggttatgtcgaaattgtctaac |
392 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
28222115 |
agaagactgccatattggtttttgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaac |
28222206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 392
Target Start/End: Complemental strand, 28214469 - 28214078
Alignment:
| Q |
1 |
ggctgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggccaaactgtcctggaaacagtaagaacaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||| ||||||||||| |||| |||||| || |
|
|
| T |
28214469 |
ggctgtacgactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttagtcagatgaggcaaaactgtcctgacaacaataagaataa |
28214370 |
T |
 |
| Q |
101 |
tatcagctgcaacggcacgttttcgacgtttacagcttcaaagccaacgaatgttcatcactctaataacaaagggatgtcatacatgcaagcattgtca |
200 |
Q |
| |
|
| ||||| ||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
28214369 |
tgtcagcagcaacggaatgttttcgacgtttacagtttcaaagccaatgaatgttcatcactctaataacaaagggatgtcatacaagcaagcattgtca |
28214270 |
T |
 |
| Q |
201 |
tctgcagtgccatctggagcatctttcgacactcactgctatcatagtttgttgagaggaagagggttattgtttgctgatcaactgctgatggctcaag |
300 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
28214269 |
tctgcagtgtcatctggagcatcttttgacactcactactatcagagattgttgagaggaagagggttattgtttgctgatcaacagctgatggctgaag |
28214170 |
T |
 |
| Q |
301 |
agaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcagatggatttcgcaagggttatgtcgaaattgtctaac |
392 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
28214169 |
agaagacagccaaattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgatgaaattgtctaac |
28214078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 4 - 392
Target Start/End: Original strand, 32306237 - 32306628
Alignment:
| Q |
4 |
tgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggccaaactgtcctggaaacagtaagaacaatat |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
32306237 |
tgtacgactttcaaggaacagggcaaccagacccgagtatacctctcgattttttcagtctgatgagactaaactgtcctgactacagtaagaacaatat |
32306336 |
T |
 |
| Q |
104 |
cagctgcaacggcacgttttcgacgtttacagcttcaaagccaacgaatgttcatcactctaata---acaaagggatgtcatacatgcaagcattgtca |
200 |
Q |
| |
|
|| | ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
32306337 |
caacagcaacggcacgttttcgacgtttacagtttcaaagccagtaaatgctcatcactctagtagtgacaaagggatgtcatacatgcaagcattgtca |
32306436 |
T |
 |
| Q |
201 |
tctgcagtgccatctggagcatctttcgacactcactgctatcatagtttgttgagaggaagagggttattgtttgctgatcaactgctgatggctcaag |
300 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
32306437 |
tctgcagtgccatctggagcatattttgacactcactactatcagagtttgttgagaggaagagggttattgttttctgatcaacagctgatggctcaag |
32306536 |
T |
 |
| Q |
301 |
agaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcagatggatttcgcaagggttatgtcgaaattgtctaac |
392 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32306537 |
agaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaac |
32306628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 277 - 392
Target Start/End: Complemental strand, 32793012 - 32792897
Alignment:
| Q |
277 |
ctgatcaactgctgatggctcaagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcagatggatttcgcaagggttat |
376 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
32793012 |
ctgatcaacagctgatggctcaagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttat |
32792913 |
T |
 |
| Q |
377 |
gtcgaaattgtctaac |
392 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
32792912 |
gttgaaattgtctaac |
32792897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 43 - 215
Target Start/End: Original strand, 32317376 - 32317548
Alignment:
| Q |
43 |
tacctctcgattttctcagtcagatgaggccaaactgtcctggaaacagtaagaacaatatcagctgcaacggcacgttttcgacgtttacagcttcaaa |
142 |
Q |
| |
|
|||||||||||||||| ||||| ||||||| ||| ||||||| |||| | |||| ||||||||| |||| | || ||||||||| ||| || |||||| |
|
|
| T |
32317376 |
tacctctcgattttctaagtcatatgaggcaaaattgtcctgacaacaattagaataatatcagcaacaacagtacattttcgacggttatagtttcaaa |
32317475 |
T |
 |
| Q |
143 |
gccaacgaatgttcatcactctaataacaaagggatgtcatacatgcaagcattgtcatctgcagtgccatct |
215 |
Q |
| |
|
||||| ||||| |||||||||||||| |||||||| |||||| |||||| ||||||| ||||||||||||| |
|
|
| T |
32317476 |
gccaattaatgtccatcactctaataataaagggatatcatacgcgcaagctttgtcatatgcagtgccatct |
32317548 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 32799638 - 32799565
Alignment:
| Q |
319 |
tttctgcttatgcttcagatgacggatcaacctttcagatggatttcgcaagggttatgtcgaaattgtctaac |
392 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32799638 |
tttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaac |
32799565 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 391
Target Start/End: Original strand, 28158816 - 28158945
Alignment:
| Q |
262 |
gagggttattgtttgctgatcaactgctgatggctcaagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcagatgga |
361 |
Q |
| |
|
||||| || |||| ||| |||||| ||| |||||| |||||| ||||| |||||| |||||||| ||||||| ||||||||||||||||||| |||||| |
|
|
| T |
28158816 |
gagggctactgttcgctaatcaacagctcatggctggagagaacactgctagattgatttctgctaatgcttccgatgacggatcaacctttcggatgga |
28158915 |
T |
 |
| Q |
362 |
tttcgcaagggttatgtcgaaattgtctaa |
391 |
Q |
| |
|
||| |||||||| ||| |||||||||||| |
|
|
| T |
28158916 |
tttggcaagggtggtgttgaaattgtctaa |
28158945 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 158 - 373
Target Start/End: Original strand, 28177370 - 28177590
Alignment:
| Q |
158 |
tcactctaataacaaagggatgtcatacatgcaagcattgtcatctgcagtgccatctggagcatctttcgacactcactgctatcatagtttgttgaga |
257 |
Q |
| |
|
||||||||| | |||| ||||||| ||||||||| ||||||||||||||| ||||| |||||| || |||||| || |||| ||||| || ||| |
|
|
| T |
28177370 |
tcactctaacataaaagtgatgtcaggcatgcaagcgttgtcatctgcagtgtcatcttaagcatcatttgacacttgatgatatccgagtttattaaga |
28177469 |
T |
 |
| Q |
258 |
ggaagagggt-----tattgtttgctgatcaactgctgatggctcaagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctt |
352 |
Q |
| |
|
||||||||| || |||| ||| |||||| |||||||||| ||||| | ||| || ||| |||||||| ||||||| ||||||||||||||||| |
|
|
| T |
28177470 |
ggaagaggggagggctactgttcgctaatcaacagctgatggctggagagagcagtgctaggttgatttctgctaatgcttccgatgacggatcaacctt |
28177569 |
T |
 |
| Q |
353 |
tcagatggatttcgcaagggt |
373 |
Q |
| |
|
|| ||||||||| |||||||| |
|
|
| T |
28177570 |
tcggatggattttgcaagggt |
28177590 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 28183155 - 28183206
Alignment:
| Q |
158 |
tcactctaataacaaagggatgtcatacatgcaagcattgtcatctgcagtg |
209 |
Q |
| |
|
||||||||| || |||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
28183155 |
tcactctaacaaaaaagggatgtcatacatggaagcgttgtcatctgcagtg |
28183206 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 28171417 - 28171487
Alignment:
| Q |
11 |
ctttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggccaaactgtc |
81 |
Q |
| |
|
|||||||||||||| ||||||||| | |||||||| ||| ||||| || ||| ||||||||| |||||||| |
|
|
| T |
28171417 |
ctttcaaggaacagcgcaaccagacctgagtatacttcttgatttgcttagtaagatgaggcaaaactgtc |
28171487 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 28174615 - 28174695
Alignment:
| Q |
3 |
ctgtacgactttcaaggaacagggcaaccagatccga-gtatacctctcgattttctcagtcagatgaggccaaactgtcc |
82 |
Q |
| |
|
|||||| ||||| ||||||||| ||||||||| | | ||||| |||| |||||||| ||||||||||||| ||||||||| |
|
|
| T |
28174615 |
ctgtacaactttaaaggaacagcgcaaccagacctgtcgtatagctcttgattttcttagtcagatgaggctaaactgtcc |
28174695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 28183014 - 28183085
Alignment:
| Q |
13 |
ttcaaggaacagggcaaccagatccgagtata--cctctcgattttctcagtcagatgaggccaaactgtcc |
82 |
Q |
| |
|
||||||||||| ||||||| |||| ||||||| | ||| ||||| || ||||||||||||| ||||||||| |
|
|
| T |
28183014 |
ttcaaggaacaaggcaaccggatctgagtatatacttcttgatttccttagtcagatgaggcaaaactgtcc |
28183085 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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