View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5617-Insertion-3 (Length: 1020)

Name: NF5617-Insertion-3
Description: NF5617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5617-Insertion-3
NF5617-Insertion-3
[»] chr3 (47 HSPs)
chr3 (295-748)||(52859268-52859721)
chr3 (42-261)||(52859755-52859960)
chr3 (811-1004)||(52859028-52859223)
chr3 (345-479)||(4539865-4539999)
chr3 (479-587)||(550865-550972)
chr3 (479-587)||(19830480-19830589)
chr3 (493-587)||(43719996-43720089)
chr3 (493-587)||(34373634-34373727)
chr3 (503-587)||(27033594-27033677)
chr3 (479-580)||(2229902-2230002)
chr3 (479-587)||(40851692-40851800)
chr3 (488-587)||(48084747-48084845)
chr3 (666-764)||(1995468-1995566)
chr3 (498-584)||(34373769-34373854)
chr3 (326-476)||(39430250-39430400)
chr3 (519-583)||(12402924-12402988)
chr3 (330-478)||(47006590-47006738)
chr3 (333-480)||(19961131-19961277)
chr3 (667-765)||(27033674-27033772)
chr3 (676-776)||(43719910-43720010)
chr3 (669-776)||(48084831-48084939)
chr3 (488-587)||(566823-566924)
chr3 (676-767)||(24754678-24754769)
chr3 (676-767)||(24763675-24763766)
chr3 (331-450)||(33791474-33791593)
chr3 (489-544)||(49289042-49289097)
chr3 (711-776)||(40810353-40810419)
chr3 (326-475)||(55158451-55158598)
chr3 (715-776)||(2229995-2230056)
chr3 (711-748)||(33632862-33632899)
chr3 (711-748)||(44637982-44638019)
chr3 (488-587)||(40810405-40810502)
chr3 (382-478)||(47069238-47069332)
chr3 (330-462)||(47499407-47499539)
chr3 (693-776)||(54911666-54911747)
chr3 (334-425)||(25134160-25134250)
chr3 (493-572)||(46167326-46167404)
chr3 (503-545)||(20485808-20485850)
chr3 (485-608)||(27959042-27959155)
chr3 (715-761)||(34373858-34373904)
chr3 (678-748)||(36354229-36354298)
chr3 (360-478)||(37919182-37919299)
chr3 (715-765)||(46167416-46167466)
chr3 (402-479)||(13637956-13638033)
chr3 (331-432)||(17587051-17587152)
chr3 (714-767)||(29586357-29586410)
chr3 (711-776)||(51982583-51982648)
[»] chr6 (37 HSPs)
chr6 (669-784)||(2800567-2800682)
chr6 (677-767)||(7215816-7215906)
chr6 (479-587)||(29698082-29698189)
chr6 (479-608)||(32737793-32737922)
chr6 (479-587)||(1249195-1249302)
chr6 (331-479)||(3787423-3787571)
chr6 (494-587)||(7162018-7162110)
chr6 (529-641)||(1516181-1516295)
chr6 (529-641)||(1518270-1518384)
chr6 (479-587)||(4804367-4804474)
chr6 (507-587)||(21159418-21159497)
chr6 (503-586)||(17944105-17944187)
chr6 (482-587)||(27826460-27826564)
chr6 (371-479)||(1065623-1065731)
chr6 (676-776)||(4804460-4804560)
chr6 (676-776)||(21159332-21159432)
chr6 (676-784)||(227526-227635)
chr6 (499-572)||(30460759-30460831)
chr6 (380-476)||(6469571-6469667)
chr6 (676-776)||(27826550-27826650)
chr6 (505-587)||(12412582-12412663)
chr6 (715-776)||(12412649-12412710)
chr6 (678-784)||(23936257-23936365)
chr6 (493-598)||(28696678-28696782)
chr6 (676-776)||(7162096-7162196)
chr6 (333-440)||(30249141-30249248)
chr6 (549-598)||(1515562-1515611)
chr6 (711-748)||(17828566-17828603)
chr6 (482-554)||(31708274-31708346)
chr6 (488-575)||(227625-227711)
chr6 (668-711)||(9952992-9953035)
chr6 (715-766)||(13089751-13089802)
chr6 (556-608)||(9954336-9954390)
chr6 (594-641)||(30460875-30460924)
chr6 (706-751)||(9954319-9954364)
chr6 (715-776)||(17944174-17944235)
chr6 (711-776)||(24484891-24484956)
[»] chr1 (39 HSPs)
chr1 (329-479)||(11017960-11018110)
chr1 (681-767)||(39426231-39426317)
chr1 (479-598)||(45977941-45978059)
chr1 (333-479)||(31635438-31635584)
chr1 (479-587)||(12151686-12151793)
chr1 (479-583)||(12380963-12381066)
chr1 (479-583)||(12385030-12385133)
chr1 (479-587)||(50484305-50484412)
chr1 (326-479)||(16394815-16394968)
chr1 (479-583)||(7841763-7841866)
chr1 (479-587)||(40328195-40328304)
chr1 (677-748)||(35534748-35534817)
chr1 (333-476)||(1035565-1035708)
chr1 (482-584)||(2845187-2845289)
chr1 (488-587)||(23862004-23862103)
chr1 (479-580)||(48327209-48327310)
chr1 (360-476)||(36012437-36012553)
chr1 (380-475)||(4084742-4084837)
chr1 (488-575)||(50294124-50294210)
chr1 (676-765)||(26860014-26860102)
chr1 (333-479)||(16583152-16583298)
chr1 (710-771)||(24977257-24977318)
chr1 (577-641)||(40328311-40328376)
chr1 (676-765)||(50294026-50294115)
chr1 (507-587)||(24977187-24977266)
chr1 (331-479)||(25366730-25366878)
chr1 (380-480)||(26176326-26176426)
chr1 (676-776)||(32887744-32887843)
chr1 (333-440)||(28490556-28490662)
chr1 (710-764)||(52854736-52854790)
chr1 (479-548)||(1609625-1609694)
chr1 (715-776)||(12151779-12151840)
chr1 (482-587)||(46608426-46608525)
chr1 (336-479)||(41884637-41884780)
chr1 (676-767)||(48327117-48327208)
chr1 (296-330)||(27760359-27760393)
chr1 (403-481)||(31262626-31262704)
chr1 (814-870)||(39426128-39426185)
chr1 (360-425)||(42066648-42066713)
[»] chr4 (56 HSPs)
chr4 (479-608)||(12153090-12153219)
chr4 (470-587)||(12241457-12241573)
chr4 (479-587)||(19901967-19902074)
chr4 (488-587)||(34778349-34778447)
chr4 (494-587)||(5416514-5416608)
chr4 (479-587)||(23610561-23610668)
chr4 (676-776)||(23610654-23610754)
chr4 (496-587)||(3952219-3952309)
chr4 (493-587)||(5763211-5763304)
chr4 (321-479)||(22019374-22019532)
chr4 (479-573)||(52018702-52018795)
chr4 (487-584)||(33262604-33262700)
chr4 (479-580)||(39862436-39862536)
chr4 (479-587)||(18207089-18207196)
chr4 (480-580)||(38079776-38079875)
chr4 (479-587)||(56558198-56558305)
chr4 (332-479)||(27918354-27918501)
chr4 (667-776)||(19901872-19901981)
chr4 (396-479)||(29508724-29508807)
chr4 (406-481)||(29818472-29818547)
chr4 (666-776)||(5416419-5416528)
chr4 (669-739)||(15178629-15178699)
chr4 (719-776)||(30567913-30567970)
chr4 (494-587)||(31862269-31862361)
chr4 (479-586)||(33247180-33247284)
chr4 (723-776)||(47922085-47922138)
chr4 (676-776)||(18207003-18207103)
chr4 (671-771)||(36532642-36532741)
chr4 (677-763)||(5815267-5815350)
chr4 (493-575)||(17080701-17080782)
chr4 (482-587)||(24073539-24073642)
chr4 (671-776)||(47922324-47922430)
chr4 (331-428)||(1961605-1961702)
chr4 (487-568)||(12312571-12312651)
chr4 (676-776)||(1871289-1871388)
chr4 (667-767)||(3952124-3952224)
chr4 (676-776)||(56558291-56558391)
chr4 (360-431)||(36937481-36937552)
chr4 (332-478)||(36989829-36989976)
chr4 (710-776)||(5763159-5763225)
chr4 (494-587)||(47922124-47922216)
chr4 (711-776)||(56269074-56269139)
chr4 (715-767)||(24073637-24073689)
chr4 (479-539)||(25442271-25442331)
chr4 (676-776)||(33247093-33247193)
chr4 (676-776)||(34778433-34778533)
chr4 (295-330)||(12096070-12096105)
chr4 (396-479)||(24940690-24940773)
chr4 (711-769)||(36003244-36003302)
chr4 (430-480)||(36937149-36937199)
chr4 (493-575)||(43447641-43447722)
chr4 (380-454)||(54719665-54719739)
chr4 (556-608)||(5361438-5361491)
chr4 (371-456)||(24743983-24744068)
chr4 (505-586)||(33841854-33841934)
chr4 (711-776)||(56453818-56453883)
[»] chr2 (40 HSPs)
chr2 (333-479)||(44068800-44068946)
chr2 (488-598)||(39465703-39465812)
chr2 (482-587)||(28564813-28564918)
chr2 (670-765)||(30709133-30709228)
chr2 (482-607)||(374466-374591)
chr2 (331-479)||(25626468-25626616)
chr2 (677-768)||(4446860-4446951)
chr2 (371-480)||(15079863-15079972)
chr2 (479-587)||(35316744-35316851)
chr2 (482-587)||(13238603-13238707)
chr2 (711-776)||(15709780-15709845)
chr2 (330-479)||(39420211-39420360)
chr2 (330-478)||(30549051-30549201)
chr2 (669-747)||(30217514-30217592)
chr2 (371-479)||(14275790-14275898)
chr2 (479-575)||(41983401-41983495)
chr2 (498-641)||(45625053-45625199)
chr2 (479-620)||(12949389-12949531)
chr2 (330-479)||(20061073-20061222)
chr2 (676-776)||(13238693-13238793)
chr2 (411-479)||(13487721-13487789)
chr2 (362-476)||(7743746-7743860)
chr2 (670-719)||(6946335-6946384)
chr2 (479-582)||(10877621-10877724)
chr2 (712-776)||(21454494-21454557)
chr2 (676-776)||(35316837-35316937)
chr2 (380-479)||(9950313-9950412)
chr2 (489-587)||(23259536-23259633)
chr2 (669-723)||(30721565-30721619)
chr2 (668-776)||(2063365-2063473)
chr2 (330-427)||(25626319-25626416)
chr2 (719-776)||(28564904-28564961)
chr2 (710-755)||(34512022-34512067)
chr2 (479-566)||(2061296-2061382)
chr2 (669-764)||(31618725-31618818)
chr2 (711-770)||(36929734-36929793)
chr2 (676-742)||(22061433-22061498)
chr2 (551-608)||(30217480-30217538)
chr2 (556-608)||(3354790-3354843)
chr2 (711-776)||(15722246-15722311)
[»] chr7 (40 HSPs)
chr7 (479-587)||(21151071-21151178)
chr7 (482-584)||(4888389-4888490)
chr7 (493-586)||(7362501-7362593)
chr7 (487-587)||(9559103-9559202)
chr7 (331-479)||(32786785-32786933)
chr7 (479-585)||(12139247-12139350)
chr7 (493-583)||(16366451-16366540)
chr7 (479-584)||(29630967-29631071)
chr7 (494-575)||(45260488-45260568)
chr7 (477-586)||(47226124-47226231)
chr7 (676-776)||(4888479-4888579)
chr7 (371-479)||(26080991-26081099)
chr7 (371-479)||(26104778-26104886)
chr7 (488-587)||(33450434-33450532)
chr7 (705-763)||(29844316-29844374)
chr7 (488-575)||(34986007-34986092)
chr7 (488-583)||(18198184-18198278)
chr7 (676-745)||(5463867-5463935)
chr7 (680-776)||(7362580-7362676)
chr7 (676-776)||(9559017-9559117)
chr7 (479-587)||(25084777-25084884)
chr7 (669-776)||(33450518-33450626)
chr7 (712-776)||(39855812-39855876)
chr7 (669-737)||(47270600-47270668)
chr7 (380-476)||(47990964-47991060)
chr7 (394-477)||(31054231-31054314)
chr7 (380-479)||(32546751-32546849)
chr7 (488-587)||(47500332-47500430)
chr7 (715-776)||(25084730-25084791)
chr7 (711-763)||(989154-989206)
chr7 (360-478)||(28337228-28337346)
chr7 (479-575)||(44647884-44647976)
chr7 (493-583)||(32915892-32915978)
chr7 (715-776)||(45260429-45260490)
chr7 (712-776)||(47500281-47500346)
chr7 (595-635)||(29631100-29631140)
chr7 (362-462)||(47390551-47390651)
chr7 (715-766)||(12139349-12139400)
chr7 (711-776)||(34985943-34986009)
chr7 (411-479)||(31399353-31399419)
[»] chr5 (44 HSPs)
chr5 (479-587)||(11775711-11775819)
chr5 (360-479)||(554306-554425)
chr5 (479-587)||(4895784-4895891)
chr5 (479-587)||(35660658-35660765)
chr5 (480-580)||(39902335-39902434)
chr5 (479-598)||(1475676-1475794)
chr5 (360-476)||(10523679-10523795)
chr5 (479-586)||(13032038-13032143)
chr5 (479-587)||(32129666-32129773)
chr5 (488-587)||(4592729-4592826)
chr5 (482-587)||(18625470-18625574)
chr5 (479-587)||(37266650-37266757)
chr5 (479-587)||(40753211-40753318)
chr5 (493-583)||(8441024-8441113)
chr5 (326-479)||(26104999-26105152)
chr5 (479-587)||(14349723-14349829)
chr5 (676-776)||(37266743-37266843)
chr5 (678-776)||(39902427-39902525)
chr5 (676-776)||(18625384-18625484)
chr5 (676-776)||(29341007-29341106)
chr5 (676-776)||(35660572-35660672)
chr5 (676-767)||(11775814-11775905)
chr5 (380-479)||(29557516-29557615)
chr5 (388-454)||(7738342-7738408)
chr5 (479-576)||(3057214-3057310)
chr5 (715-776)||(4895737-4895798)
chr5 (676-776)||(32129580-32129680)
chr5 (328-423)||(8222097-8222192)
chr5 (711-745)||(31653078-31653112)
chr5 (715-776)||(14349815-14349876)
chr5 (479-544)||(43405555-43405620)
chr5 (383-467)||(16627289-16627373)
chr5 (676-776)||(43309120-43309220)
chr5 (668-702)||(21213954-21213988)
chr5 (503-545)||(23253736-23253778)
chr5 (541-583)||(28142828-28142870)
chr5 (518-584)||(32793332-32793397)
chr5 (473-515)||(33368510-33368552)
chr5 (360-430)||(41144648-41144718)
chr5 (711-764)||(3057152-3057205)
chr5 (494-539)||(10242766-10242811)
chr5 (715-776)||(34827204-34827265)
chr5 (402-479)||(40044819-40044896)
chr5 (715-776)||(40753164-40753225)
[»] scaffold0456 (1 HSPs)
scaffold0456 (505-598)||(13641-13733)
[»] chr8 (36 HSPs)
chr8 (670-776)||(42761725-42761831)
chr8 (479-587)||(30426718-30426825)
chr8 (479-587)||(36991275-36991382)
chr8 (669-765)||(21360299-21360398)
chr8 (482-587)||(28069641-28069745)
chr8 (711-776)||(18689503-18689568)
chr8 (479-580)||(41511181-41511281)
chr8 (479-586)||(10652667-10652774)
chr8 (479-587)||(28318951-28319058)
chr8 (488-583)||(10672565-10672659)
chr8 (479-575)||(27490067-27490162)
chr8 (479-573)||(37966505-37966598)
chr8 (676-776)||(28069731-28069831)
chr8 (488-571)||(8412182-8412264)
chr8 (380-479)||(15067616-15067715)
chr8 (331-480)||(6530301-6530450)
chr8 (371-476)||(7774631-7774736)
chr8 (371-476)||(7791278-7791383)
chr8 (371-476)||(7811862-7811967)
chr8 (715-776)||(30426671-30426732)
chr8 (494-598)||(12177602-12177705)
chr8 (494-598)||(12422030-12422133)
chr8 (669-761)||(37966400-37966491)
chr8 (360-479)||(8114322-8114441)
chr8 (479-545)||(5033025-5033091)
chr8 (494-580)||(40695303-40695388)
chr8 (715-776)||(40695249-40695310)
chr8 (331-479)||(31313302-31313450)
chr8 (488-575)||(45113198-45113284)
chr8 (489-575)||(6014123-6014208)
chr8 (612-658)||(8412687-8412733)
chr8 (711-769)||(17520401-17520459)
chr8 (296-330)||(21636524-21636558)
chr8 (360-441)||(8867206-8867287)
chr8 (711-776)||(24557179-24557244)
chr8 (479-544)||(28584581-28584645)
[»] scaffold0006 (1 HSPs)
scaffold0006 (488-608)||(73867-73987)
[»] scaffold0012 (2 HSPs)
scaffold0012 (479-587)||(207982-208089)
scaffold0012 (676-776)||(208075-208175)
[»] scaffold0126 (2 HSPs)
scaffold0126 (493-580)||(22498-22584)
scaffold0126 (721-771)||(22450-22500)
[»] scaffold0062 (2 HSPs)
scaffold0062 (711-776)||(58692-58757)
scaffold0062 (711-776)||(70803-70868)
[»] scaffold0035 (2 HSPs)
scaffold0035 (494-587)||(16446-16538)
scaffold0035 (715-776)||(16399-16460)
[»] scaffold0250 (2 HSPs)
scaffold0250 (479-587)||(7066-7173)
scaffold0250 (715-776)||(7159-7220)
[»] scaffold0482 (1 HSPs)
scaffold0482 (371-476)||(530-635)
[»] scaffold0008 (2 HSPs)
scaffold0008 (667-776)||(9155-9264)
scaffold0008 (482-580)||(9257-9351)
[»] scaffold0328 (1 HSPs)
scaffold0328 (344-442)||(12415-12513)
[»] scaffold0542 (1 HSPs)
scaffold0542 (325-422)||(4504-4601)


Alignment Details
Target: chr3 (Bit Score: 366; Significance: 0; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 295 - 748
Target Start/End: Complemental strand, 52859721 - 52859268
Alignment:
Q  295 ttataatgtatcaattgatgtgattaaatactttttggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgt 394  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| || | |||||||||||||||| ||||||||||||||||    
T  52859721 ttataatgtatcaattgatgtcattaaatactttttggcaaatgttaatttgtgccctcaatgacatatgttaaataactcattgtagaaatatacgtgt 52859622  T
Q  395 taaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtgttaagattctcttca 494  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||    
T  52859621 tataagacgtgcagtcaacttcttaaaagttaaactatcatgttttccgatgcaaaattgttcattttgagttccttaacatgaattaagattctcttca 52859522  T
Q  495 tttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccaccatctat 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  52859521 tttatgtctttctccatttctaccatttggagaaataaatacacataaaatcttaaaaaagagtaaaatataattaatgattgtgggacgcaccatctat 52859422  T
Q  595 ttttgtgtctatcttttcaaattgtaaactccatttattttgtcaaacgacgaggatctgaacctccttagcatgggttatgatcctctccatttgataa 694  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || | ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  52859421 ttttgtgtctatctttccaaattgtaaactccatttattttgtcaaaagatggggatctgaacctccttaacataggttatgatcctctccatttgataa 52859322  T
Q  695 aataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgg 748  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  52859321 aataaatgaaaatacacaatttagagagagatagacacataaaatagatagtgg 52859268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 42 - 261
Target Start/End: Complemental strand, 52859960 - 52859755
Alignment:
Q  42 atagtagtactagtattaaaaaagaaacaaaatacggataaaagcctcaacttttggaacaggacataatgactctattcattacattacatacggatta 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |              |||||||||||||||||||||||    
T  52859960 atagtagtactagtattaaaaaagaaacaaaatacggataaaagcctcaacttttggaacatg--------------ttcattacattacatacggatta 52859875  T
Q  142 tttggatatctaccggtggatacgacttttacagttttaccccacaataatggaatggaaatggatgttgagaaagaaagtcttgcttggacaaatagaa 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  52859874 tttggatatctaccggtggatacgacttttacagttttaccccacaataatggaatggaaatggatgttgagaaagaaagtcttgcttggacaaatacaa 52859775  T
Q  242 cacttcaagtttagacacac 261  Q
    ||||||||||||||||||||    
T  52859774 cacttcaagtttagacacac 52859755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 811 - 1004
Target Start/End: Complemental strand, 52859223 - 52859028
Alignment:
Q  811 gaatctatatatctccaaatggaaaaattgagaggatacaaa-tgaagaaaatcttgacttccttaacatatgttcttaggcacaagttaacgtgatcat 909  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  52859223 gaatctatatatctccaaatggagaaattgagaggatacaaaatgaagaaaatcttgacttccttaatatatgttcttaggcacaagttaacgtcatcat 52859124  T
Q  910 actttttaatttaattttgttagttttaatataaatatgtgcttaaaattgaagtgt--agtgtgagtagaacc-aactttctcatggatgttacctt 1004  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||||| |||||||||||||||||||||||    
T  52859123 acttttt-atttaattttgttagtttt-atataaatatgtgcttaaaattaaagtgttgagtgtgagtagaaccaaactttctcatggatgttacctt 52859028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 345 - 479
Target Start/End: Original strand, 4539865 - 4539999
Alignment:
Q  345 tgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccga 444  Q
    ||||||||||| |  |||||||||  |||||||  || ||||||| || ||||||  ||||||||||||||||||||||||||| ||||||||||| | |    
T  4539865 tgtgctctcaaaggcacatgttaagaaactcattataaaaatatatgtattaaaaatcgtgcaatcaacttcttaaaagttaaattatcatgtttttcaa 4539964  T
Q  445 tgtaaaattgttcattttgggttccttaacatgtg 479  Q
    || |||||||||||||||| |||||||||||||||    
T  4539965 tgcaaaattgttcattttgagttccttaacatgtg 4539999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 550972 - 550865
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||||||| ||||| | ||||||||| |||||||| |||||||||||| |||| || ||    
T  550972 gttaagatcctctccatttatgtctttctccatttcttccatttggagagataaagatacataaaatttttaaaaa-agtaaaatataaataataatggt 550874  T
Q  579 gggacccac 587  Q
    |||||||||    
T  550873 gggacccac 550865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 19830589 - 19830480
Alignment:
Q  479 gttaagattctcttcattt-atgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattg 577  Q
    |||||||| |||| ||||| |||| ||| ||||||||| | ||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||||| |    
T  19830589 gttaagatcctctccattttatgtgtttttccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgatgg 19830490  T
Q  578 tgggacccac 587  Q
    ||||||||||    
T  19830489 tgggacccac 19830480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 493 - 587
Target Start/End: Complemental strand, 43720089 - 43719996
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||| ||||||| | |||||||||||||||||| |||||||||||    
T  43720089 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc-ttaaaaaaaataaaatataattaatgatggtgggacccac 43719996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 493 - 587
Target Start/End: Complemental strand, 34373727 - 34373634
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    ||||||||| ||||||||||||| | ||||||||| ||||| | ||| |||||||| ||||| |||||||||||||||||||| |||||||||||    
T  34373727 catttatgtgtttctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaa-agtaaaatataattaatgatggtgggacccac 34373634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 503 - 587
Target Start/End: Original strand, 27033594 - 27033677
Alignment:
Q  503 tttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| |||||| ||||    
T  27033594 tttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggtgggatccac 27033677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 479 - 580
Target Start/End: Original strand, 2229902 - 2230002
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||||||||||||| |||||| ||||||   ||||||||| ||||| ||||||||||| ||| |||| |||||||||||||||||||| ||    
T  2229902 gttaggatcctcttcatttatgtgtttctctatttctttaatttggagagataaagacacataaaat-tttgaaaaaagtaaaatataattaatgatggt 2230000  T
Q  579 gg 580  Q
    ||    
T  2230001 gg 2230002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 40851692 - 40851800
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatat-aattaatgattg 577  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||| | |||||||| |    
T  40851692 gttaggatcctctccatttatgtatttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatatgatttaatgatgg 40851790  T
Q  578 tgggacccac 587  Q
    | ||||||||    
T  40851791 taggacccac 40851800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 488 - 587
Target Start/End: Original strand, 48084747 - 48084845
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||| |||||||||| |||||||||||||||||||||||| ||| | ||||| ||||| ||| |||| | ||||| ||||||||||||  ||||||||||    
T  48084747 ctctccatttatgtccttctccatttctaccatttggagagatatagacacacaaaat-tttgaaaaaaataaaaaataattaatgatgatgggacccac 48084845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 666 - 764
Target Start/End: Complemental strand, 1995566 - 1995468
Alignment:
Q  666 catgggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtg 764  Q
    ||||||||| |||||||| ||||| || ||||||||| || ||||||||||| ||||||||| ||| | |||||||||| || ||| ||||| ||||||    
T  1995566 catgggttaggatcctcttcattttatcaaataaatggaagtacacaatttgaagagagatagacatagaaaatagataatgagtcctaccaataagtg 1995468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 498 - 584
Target Start/End: Original strand, 34373769 - 34373854
Alignment:
Q  498 atgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacc 584  Q
    |||| ||||| ||||| | | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  34373769 atgtgtttcttcattttttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggtgggacc 34373854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 326 - 476
Target Start/End: Original strand, 39430250 - 39430400
Alignment:
Q  326 tttttggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagtt 425  Q
    ||||||||||||| ||| || ||| ||||| |   ||| ||||| |||||||  |||||| ||| || | ||||| |||||| ||||||||| |||||||    
T  39430250 tttttggcaaatgctaacttatgccctcaagggcgcatcttaaagaactcattatagaaacatatgtatcaaaagtcgtgcagtcaacttctaaaaagtt 39430349  T
Q  426 aaactatcatgttttccgatgtaaaattgttcattttgggttccttaacat 476  Q
    ||| ||| ||||||||| ||| ||| ||| || ||||| ||||||||||||    
T  39430350 aaaatattatgttttccaatgcaaagttgctctttttgagttccttaacat 39430400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 519 - 583
Target Start/End: Original strand, 12402924 - 12402988
Alignment:
Q  519 atttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggac 583  Q
    ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| || |||||||    
T  12402924 atttggagagataaagacacataaaatcttaaaaaaaagtaaaatataattaataatggtgggac 12402988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 330 - 478
Target Start/End: Original strand, 47006590 - 47006738
Alignment:
Q  330 tggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaac 429  Q
    ||||||||||||| |||||| ||||| |  |||||||||  ||||  |  ||||||||| ||  | ||||| |||||| |||||||||||||| |||||     
T  47006590 tggcaaatgttaacttgtgccctcaagggcacatgttaaggaactttttatagaaatattcgcatcaaaagtcgtgcattcaacttcttaaaatttaaaa 47006689  T
Q  430 tatcatgttttccgatgtaaaattgttcattttgggttccttaacatgt 478  Q
    | | ||||||||| ||| ||| ||| |  ||||||||||||||||||||    
T  47006690 tgttatgttttccaatgcaaagttgctttttttgggttccttaacatgt 47006738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 333 - 480
Target Start/End: Original strand, 19961131 - 19961277
Alignment:
Q  333 caaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactat 432  Q
    |||||| ||| |||||| || || || |||||||||  |||| ||  ||||||||||||| | |||||  ||| | ||||||||| | |||||||| |||    
T  19961131 caaatgataacttgtgccctgaaggatacatgttaaggaactaattatagaaatatacgtatcaaaagttgtgtattcaacttct-agaagttaaaatat 19961229  T
Q  433 catgttttccgatgtaaaattgttcattttgggttccttaacatgtgt 480  Q
     ||||||||| ||  ||||||||||||||| | |||||||||||||||    
T  19961230 tatgttttccaatacaaaattgttcattttagattccttaacatgtgt 19961277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 667 - 765
Target Start/End: Complemental strand, 27033772 - 27033674
Alignment:
Q  667 atgggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgg 765  Q
    |||||| | |||| |||||||||||||||||||||| |  |   ||| ||||||||||||| |||||  |||||||| ||||||| |||||||||||||    
T  27033772 atgggtgaagatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgg 27033674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 776
Target Start/End: Original strand, 43719910 - 43720010
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||| | |||||||||| |  |   ||| ||||||||||||| ||||| |||||| || ||||||| ||||||||||||||| ||| |||    
T  43719910 gatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccat 43720009  T
Q  776 c 776  Q
    |    
T  43720010 c 43720010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 669 - 776
Target Start/End: Complemental strand, 48084939 - 48084831
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataa-aatagatagtgggtcataccactaagtgggt 767  Q
    |||||| ||||||||||||||| ||||||||||  |  |   |||||||| |||||||| ||||| || ||||||| |||||||  ||||||||||||||    
T  48084939 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T
Q  768 tccatcatc 776  Q
     ||||||||    
T  48084839 cccatcatc 48084831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 488 - 587
Target Start/End: Complemental strand, 566924 - 566823
Alignment:
Q  488 ctcttcatttatgtctttctccatt----tctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggac 583  Q
    |||||||||||||||||| ||||||    ||| ||||||||||| ||||| | |||||||||||| ||||  |||||||||||| |||| |  |||||||    
T  566924 ctcttcatttatgtctttatccattaatttcttccatttggagagataaaaatacataaaatcttgaaaa--agtaaaatataaataataaaggtgggac 566827  T
Q  584 ccac 587  Q
    ||||    
T  566826 ccac 566823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 676 - 767
Target Start/End: Complemental strand, 24754769 - 24754678
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggt 767  Q
    |||||||||||||||  |||||||||| |  |  |||| ||||||||||||| ||||| ||||||||| ||  ||| |||||||||||||||    
T  24754769 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggt 24754678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 676 - 767
Target Start/End: Complemental strand, 24763766 - 24763675
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggt 767  Q
    |||||||||||||||  |||||||||| |  |  |||| ||||||||||||| ||||| ||||||||| ||  ||| |||||||||||||||    
T  24763766 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggt 24763675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 450
Target Start/End: Original strand, 33791474 - 33791593
Alignment:
Q  331 ggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaact 430  Q
    |||||||| ||| |||||  |||||||| | |||||||  || |||| ||| |||||||||| | ||| | ||| || ||||||| |||||||||||| |    
T  33791474 ggcaaatgctaacttgtgtcctcaacgacatatgttaaggaattcattgtaaaaatatacgtatcaaatgtcgtacattcaactttttaaaagttaaaat 33791573  T
Q  431 atcatgttttccgatgtaaa 450  Q
    || ||||||||| |||||||    
T  33791574 attatgttttccaatgtaaa 33791593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 49289097 - 49289042
Alignment:
Q  489 tcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaa 544  Q
    ||||||||||||| ||||||||||| |  |||||||||||||||| ||||||||||    
T  49289097 tcttcatttatgtttttctccatttgtttcatttggagaaataaagacacataaaa 49289042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 40810353 - 40810419
Alignment:
Q  711 caatttggagagagataaacacataa-aatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||||||||||| | || ||||||| |||||||  |||||||||||||| ||||||||    
T  40810353 caatttggagagagataaacaaaaaagaatagatggtgggtctaaccactaagtgggtcccatcatc 40810419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 326 - 475
Target Start/End: Complemental strand, 55158598 - 55158451
Alignment:
Q  326 tttttggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagtt 425  Q
    |||| |||||||||||| |||||| |||||    |||||||||  || | ||  ||||||||||| | |||||   ||||||||||||||||||||||||    
T  55158598 ttttaggcaaatgttaacttgtgccctcaatagcacatgttaagaaatttattatagaaatatacatattaaat--cgtgcaatcaacttcttaaaagtt 55158501  T
Q  426 aaactatcatgttttccgatgtaaaattgttcattttgggttccttaaca 475  Q
    |||  ||||| |||||||||  ||| ||  ||||||  ||||||||||||    
T  55158500 aaatcatcatattttccgatacaaagttactcatttacggttccttaaca 55158451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 715 - 776
Target Start/End: Complemental strand, 2230056 - 2229995
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||||| |||||||||  |||||| ||||||||||||| ||||| ||||    
T  2230056 ttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatc 2229995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 711 - 748
Target Start/End: Complemental strand, 33632899 - 33632862
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgg 748  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33632899 caatttggagagagatagacacataaaatagatagtgg 33632862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 711 - 748
Target Start/End: Complemental strand, 44638019 - 44637982
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgg 748  Q
    |||||| |||||||||||||||||||||||||||||||    
T  44638019 caattttgagagagataaacacataaaatagatagtgg 44637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 488 - 587
Target Start/End: Complemental strand, 40810502 - 40810405
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||| ||||||||||||| |||||||||| |||| ||||| ||  ||| ||| ||||| || ||||| | ||||| ||||||||||||  ||||||||||    
T  40810502 ctctccatttatgtctttttccatttctatcattaggagagat--ataaacacaaaattttgaaaaaaaataaaaaataattaatgatgatgggacccac 40810405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 382 - 478
Target Start/End: Complemental strand, 47069332 - 47069238
Alignment:
Q  382 gaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgt 478  Q
    ||||||||| | | ||||| |||||| ||||||| |||||||| ||| |||||| |||| | ||||||| ||| ||||||| |||||||||||||||    
T  47069332 gaaatatacatatcaaaagtcgtgcagtcaactt-ttaaaagtcaaattatcatatttttcaatgtaaa-ttgctcattttaggttccttaacatgt 47069238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 330 - 462
Target Start/End: Complemental strand, 47499539 - 47499407
Alignment:
Q  330 tggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaac 429  Q
    ||||||||||||||||||||| | || || |||||||||  || ||||  || |||||||||| |||||||  ||| | ||||||| ||||||||| |      
T  47499539 tggcaaatgttaatttgtgctattaaagacacatgttaagaaattcattataaaaatatacgtattaaaagttgtgaattcaactttttaaaagttcata 47499440  T
Q  430 tatcatgttttccgatgtaaaattgttcatttt 462  Q
    ||| || |||||  || ||||||||||| ||||    
T  47499439 tattatattttctaatataaaattgttcttttt 47499407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 693 - 776
Target Start/End: Complemental strand, 54911747 - 54911666
Alignment:
Q  693 aaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    |||||||||||| |||||  ||||| ||||||||| | ||||||||||| ||||||||| ||||| ||| || |||||| ||||    
T  54911747 aaaataaatgaagataca--atttgaagagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatc 54911666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 334 - 425
Target Start/End: Complemental strand, 25134250 - 25134160
Alignment:
Q  334 aaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagtt 425  Q
    ||||||||| |||||||||||| || |||||||||  |||||||  |||||||||| || | ||||| ||||| || ||||||| |||||||    
T  25134250 aaatgttaacttgtgctctcaaagacacatgttaaggaactcattatagaaatatatgtatcaaaagtcgtgc-attaacttctaaaaagtt 25134160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 572
Target Start/End: Original strand, 46167326 - 46167404
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaat 572  Q
    ||||||||| ||| ||||||||| | |||| |||| ||||| ||| ||| |||||| ||||| |||||||||||||||||    
T  46167326 catttatgtgtttttccatttcttcaatttagagagataaagacaaatataatcttgaaaaa-agtaaaatataattaat 46167404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 503 - 545
Target Start/End: Complemental strand, 20485850 - 20485808
Alignment:
Q  503 tttctccatttctaccatttggagaaataaatacacataaaat 545  Q
    ||||||||||||||||||||||||| ||| | |||||||||||    
T  20485850 tttctccatttctaccatttggagagatataaacacataaaat 20485808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 485 - 608
Target Start/End: Original strand, 27959042 - 27959155
Alignment:
Q  485 attctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacc 584  Q
    ||||||| |||||||   ||||||||||| | |||||| |||| ||||||||||||||||           ||||||| |||||||||||| ||||||||    
T  27959042 attctctccatttataaatttctccatttgttccatttagagagataaatacacataaaa-----------agtaaaaaataattaatgatggtgggacc 27959130  T
Q  585 caccatcta-tttttgtgtctatct 608  Q
    |||||  || |||||||||||||||    
T  27959131 caccacttattttttgtgtctatct 27959155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 715 - 761
Target Start/End: Complemental strand, 34373904 - 34373858
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaa 761  Q
    ||||||||||||| ||||| ||||||||| ||||||| |||||||||    
T  34373904 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaa 34373858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 678 - 748
Target Start/End: Original strand, 36354229 - 36354298
Alignment:
Q  678 tcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgg 748  Q
    ||||||||||||| |||| |||||| || || ||||||||||||||||| |||||| |||| ||| |||||    
T  36354229 tcctctccatttgttaaagtaaatggaa-tatacaatttggagagagatgaacacaaaaaagagaaagtgg 36354298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 360 - 478
Target Start/End: Original strand, 37919182 - 37919299
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcat 459  Q
    |||||||||  |||||||  || |||||||||| | ||||   ||||| ||||||||||||||||| |  ||| ||||||||| ||||||| |||||| |    
T  37919182 acatgttaagaaactcattatataaatatacgtatcaaaaattgtgcattcaacttcttaaaagttgacatattatgttttccaatgtaaagttgttc-t 37919280  T
Q  460 tttgggttccttaacatgt 478  Q
    |||  ||| ||||||||||    
T  37919281 tttatgttgcttaacatgt 37919299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 715 - 765
Target Start/End: Complemental strand, 46167466 - 46167416
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgg 765  Q
    ||||||||||||| ||||| |||||| || ||||||| |||||||||||||    
T  46167466 ttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtgg 46167416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 402 - 479
Target Start/End: Original strand, 13637956 - 13638033
Alignment:
Q  402 cgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||| |||| ||||||||| ||||| | | ||||||||| | |||||||||||  |||| ||||| ||||||||||    
T  13637956 cgtgcattcaaattcttaaaaattaaaatgttatgttttccaacgtaaaattgttttttttaggttctttaacatgtg 13638033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 331 - 432
Target Start/End: Original strand, 17587051 - 17587152
Alignment:
Q  331 ggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaact 430  Q
    ||||||| |||| |||||| ||||| |  |||||||||  ||||  || |||||| |||||| | ||||| |||||| ||||| ||||||||||||| ||    
T  17587051 ggcaaatattaacttgtgccctcaagggcacatgttaatgaacttgtaatagaaaaatacgtatcaaaagtcgtgcattcaacatcttaaaagttaatct 17587150  T
Q  431 at 432  Q
    ||    
T  17587151 at 17587152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 714 - 767
Target Start/End: Complemental strand, 29586410 - 29586357
Alignment:
Q  714 tttggagagagataaacacataaaatagatagtgggtcataccactaagtgggt 767  Q
    |||||||||||||| ||||||||||||||||||  ||| ||| | |||||||||    
T  29586410 tttggagagagatagacacataaaatagatagtaagtcttactattaagtgggt 29586357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 51982583 - 51982648
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||||||| | ||||||||||| ||||||||  || || |||||| |||| ||||||    
T  51982583 caatttggagagagatagatacataaaatagttagtgggttctatcattaagtgagttctatcatc 51982648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 5e-37; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 669 - 784
Target Start/End: Original strand, 2800567 - 2800682
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggtt 768  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||     
T  2800567 gggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggtc 2800666  T
Q  769 ccatcatcgttgatta 784  Q
    ||| |||| |||||||    
T  2800667 ccaccatcattgatta 2800682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 677 - 767
Target Start/End: Original strand, 7215816 - 7215906
Alignment:
Q  677 atcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggt 767  Q
    |||||||||||||||||||||||||| || | ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  7215816 atcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 7215906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 29698082 - 29698189
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  29698082 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 29698180  T
Q  579 gggacccac 587  Q
    |||||||||    
T  29698181 gggacccac 29698189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 479 - 608
Target Start/End: Original strand, 32737793 - 32737922
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||| | ||||||||||||| | ||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||||| ||    
T  32737793 gttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaa-agtaaaatataattaatgatggt 32737891  T
Q  579 gggacccaccatcta-tttttgtgtctatct 608  Q
    || |||||||||||| |||||||||||||||    
T  32737892 ggaacccaccatctattttttgtgtctatct 32737922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 1249302 - 1249195
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| |||| ||||||||| ||||||||||||| | ||||||| | ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  1249302 gttaagatcctctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 1249204  T
Q  579 gggacccac 587  Q
    |||||||||    
T  1249203 gggacccac 1249195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 331 - 479
Target Start/End: Original strand, 3787423 - 3787571
Alignment:
Q  331 ggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaact 430  Q
    |||||||| |||||||||| ||||| || |||||||||| |||| ||  || |||||||||| ||||||| | | || |||| |||||||||||||||||    
T  3787423 ggcaaatgctaatttgtgccctcaaggacacatgttaaagaacttattataaaaatatacgtattaaaagtcatacattcaatttcttaaaagttaaact 3787522  T
Q  431 atcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||||||||  ||||||||||| || |||||  ||| ||||||||||    
T  3787523 atcatgttttctaatgtaaaattgctctttttgaattcattaacatgtg 3787571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 494 - 587
Target Start/End: Original strand, 7162018 - 7162110
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    ||||| || ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  7162018 atttacgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggtgggacccac 7162110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 529 - 641
Target Start/End: Complemental strand, 1516295 - 1516181
Alignment:
Q  529 ataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccaccatctattttt-gtgtctatctttt--caaattgtaaactc 625  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| |||||| ||||||||||||||| || || |||| |   ||||||| ||||||    
T  1516295 ataaatacacataaaat-tttaaaaaaagtaaaatataattaatgatggtgggatccaccatctattttttgtatccatctctctccaaattgcaaactc 1516197  T
Q  626 catttattttgtcaaa 641  Q
    ||||||||||| ||||    
T  1516196 catttattttgccaaa 1516181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 529 - 641
Target Start/End: Complemental strand, 1518384 - 1518270
Alignment:
Q  529 ataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccaccatctattttt-gtgtctatctttt--caaattgtaaactc 625  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| |||||| ||||||||||||||| || || |||| |   ||||||| ||||||    
T  1518384 ataaatacacataaaat-tttaaaaaaagtaaaatataattaatgatggtgggatccaccatctattttttgtatccatctctctccaaattgcaaactc 1518286  T
Q  626 catttattttgtcaaa 641  Q
    ||||||||||| ||||    
T  1518285 catttattttgccaaa 1518270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 4804367 - 4804474
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||| | ||||||||||||| | ||||||||| ||||| ||||||||||| ||| |||| |||||||||||||||||||| ||    
T  4804367 gttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat-tttgaaaaaagtaaaatataattaatgatggt 4804465  T
Q  579 gggacccac 587  Q
    |||||||||    
T  4804466 gggacccac 4804474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 507 - 587
Target Start/End: Complemental strand, 21159497 - 21159418
Alignment:
Q  507 tccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    ||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  21159497 tccatttcttcaatttggagatataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggtgggacccac 21159418  T

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Target: chr6; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 503 - 586
Target Start/End: Original strand, 17944105 - 17944187
Alignment:
Q  503 tttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggaccca 586  Q
    ||||||||||||| | ||||||||| ||||| ||||||||||||||  |||| |||||||||||||||||||| ||||||||||    
T  17944105 tttctccatttcttcaatttggagagataaaaacacataaaatcttggaaaa-agtaaaatataattaatgatggtgggaccca 17944187  T

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Target: chr6; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 482 - 587
Target Start/End: Original strand, 27826460 - 27826564
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtggg 581  Q
    ||||| |||| ||||||||| |||||| |||||| |||||| |||| ||||| ||||||||||  ||| |||| | |||||||||||||||||| |||||    
T  27826460 aagatcctctccatttatgtgtttctcaatttcttccattttgagagataaagacacataaaaaattttaaaaaa-taaaatataattaatgatggtggg 27826558  T
Q  582 acccac 587  Q
    ||||||    
T  27826559 acccac 27826564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 371 - 479
Target Start/End: Original strand, 1065623 - 1065731
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttcct 470  Q
    |||||||| || ||||||| || | ||||| ||| || ||||||| |||||||||||||||| || |||||| || ||||||| ||| ||||| ||||||    
T  1065623 aactcataataaaaatatatgtatcaaaagtcgtacattcaacttattaaaagttaaactattatattttccaatataaaattattctttttgagttcct 1065722  T
Q  471 taacatgtg 479  Q
    |||||||||    
T  1065723 taacatgtg 1065731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 4804560 - 4804460
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| |  |  |||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||| |||    
T  4804560 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 4804461  T
Q  776 c 776  Q
    |    
T  4804460 c 4804460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 676 - 776
Target Start/End: Original strand, 21159332 - 21159432
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    ||||||||||||||| |||||||||||||  |   ||| ||||||||| ||| ||||| ||||||||| ||||||| ||||||||||||||| ||| |||    
T  21159332 gatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 21159431  T
Q  776 c 776  Q
    |    
T  21159432 c 21159432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 676 - 784
Target Start/End: Original strand, 227526 - 227635
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataa-aatagatagtgggtcataccactaagtgggttccatca 774  Q
    ||||||||||||||| ||||||||||| |  |   || |||||||||||||| ||||| || ||||||| ||||||| ||||||||||||| | ||||||    
T  227526 gatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatcccatca 227625  T
Q  775 tcgttgatta 784  Q
    || |||||||    
T  227626 tcattgatta 227635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 499 - 572
Target Start/End: Original strand, 30460759 - 30460831
Alignment:
Q  499 tgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaat 572  Q
    ||||||||| ||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||    
T  30460759 tgtctttcttcatttcttctatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaat 30460831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 380 - 476
Target Start/End: Complemental strand, 6469667 - 6469571
Alignment:
Q  380 tagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacat 476  Q
    ||||||||||  | ||||||| |||||| |||||||||||||| ||||| ||||||||||| | ||| ||| ||| ||||||| ||||| |||||||    
T  6469667 tagaaatatatttattaaaagtcgtgcagtcaacttcttaaaaattaaattatcatgtttttcaatgcaaagttgctcattttcggttctttaacat 6469571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 27826650 - 27826550
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    ||||||||||||||| |||||||| |||| ||   |||  | |||||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||| |||    
T  27826650 gatcctctccatttggtaaaataactgaagatttgcaaggttgagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 27826551  T
Q  776 c 776  Q
    |    
T  27826550 c 27826550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 505 - 587
Target Start/End: Original strand, 12412582 - 12412663
Alignment:
Q  505 tctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    ||||||||||| | ||||||||| ||||| | ||||||||| || ||||| |||||||||||||||||||| |||| ||||||    
T  12412582 tctccatttcttcaatttggagagataaaaatacataaaattttgaaaaa-agtaaaatataattaatgatggtggaacccac 12412663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 776
Target Start/End: Complemental strand, 12412710 - 12412649
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| |||||  |||||||| ||||||| ||||||||||||||||||| ||||    
T  12412710 ttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatc 12412649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 678 - 784
Target Start/End: Complemental strand, 23936365 - 23936257
Alignment:
Q  678 tcctctccatttgataaaataaatgaaaatacacaatttg--gagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||||| | ||||||| ||||||||| |  |||||||||| |||||||| || ||||| || |  ||||| ||||||||| ||| |||    
T  23936365 tcctctccatttgataaattgaatgaaagtacacaattcggagagagagatagacacataagatggatagcggattctaccattaagtgggtcccaccat 23936266  T
Q  776 cgttgatta 784  Q
    | |||||||    
T  23936265 ccttgatta 23936257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 493 - 598
Target Start/End: Complemental strand, 28696782 - 28696678
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccaccatct 592  Q
    ||||||||| | |||||||||||| |||||||||| ||||| ||||| ||||  |||| ||| || | || |||||||||||| |||| |||||| ||||    
T  28696782 catttatgtgtctctccatttctatcatttggagagataaagacaca-aaaaagtttagaaaaagaataaaataattaatgatcgtggaacccactatct 28696684  T
Q  593 attttt 598  Q
    ||||||    
T  28696683 attttt 28696678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 7162196 - 7162096
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||| |||||||||||||||||||||| |  |   ||| ||||||||||||| |||||  |||||||| ||||||| ||| ||||||||||| ||| |||    
T  7162196 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccat 7162097  T
Q  776 c 776  Q
    |    
T  7162096 c 7162096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 440
Target Start/End: Original strand, 30249141 - 30249248
Alignment:
Q  333 caaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactat 432  Q
    |||||| ||| |||||| || || || |||||||||  |||||||  |||||||||| || | ||||  |||||| |||||||||||||||||||| |||    
T  30249141 caaatgctaacttgtgcccttaatgacacatgttaaggaactcattatagaaatataggtatcaaaattcgtgcagtcaacttcttaaaagttaaaatat 30249240  T
Q  433 catgtttt 440  Q
     |||||||    
T  30249241 tatgtttt 30249248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 1515611 - 1515562
Alignment:
Q  549 taaaaagagtaaaatataattaatgattgtgggacccaccatctattttt 598  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||    
T  1515611 taaaaaaagtaaaatataattaatgacggtgggatccaccatctattttt 1515562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 711 - 748
Target Start/End: Original strand, 17828566 - 17828603
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgg 748  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17828566 caatttggagagagatagacacataaaatagatagtgg 17828603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 554
Target Start/End: Complemental strand, 31708346 - 31708274
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaa 554  Q
    ||||| ||||| |||||||| |||||||||||||| |||||| ||| ||| | ||||| ||||| ||||||||    
T  31708346 aagatcctctttatttatgtttttctccatttctatcatttgaagagatatagacacacaaaatttttaaaaa 31708274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 575
Target Start/End: Complemental strand, 227711 - 227625
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    ||||||||||||||  |||||||||||||| ||||||||| ||| | ||||| ||| | || |||||| |||||| ||||| ||||||    
T  227711 ctcttcatttatgtgcttctccatttctacaatttggagagatatagacacacaaagttttgaaaaag-gtaaaaaataatcaatgat 227625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 711
Target Start/End: Original strand, 9952992 - 9953035
Alignment:
Q  668 tgggttatgatcctctccatttgataaaataaatgaaaatacac 711  Q
    ||||||| ||||||||||||||||||||||||||| || |||||    
T  9952992 tgggttaagatcctctccatttgataaaataaatggaagtacac 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 766
Target Start/End: Original strand, 13089751 - 13089802
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtggg 766  Q
    ||||||||||||| ||||| || |||||| ||||||| ||||||||||||||    
T  13089751 ttggagagagatagacacaaaatatagatggtgggtcctaccactaagtggg 13089802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 556 - 608
Target Start/End: Complemental strand, 9954390 - 9954336
Alignment:
Q  556 agtaaaatataattaatgatt-gtgggacccaccatctatttt-tgtgtctatct 608  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  9954390 agtaaaaaataattaatgattggtgggacccactatctattttatgtgtctatct 9954336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 594 - 641
Target Start/End: Original strand, 30460875 - 30460924
Alignment:
Q  594 tttttgtgtctatctttt--caaattgtaaactccatttattttgtcaaa 641  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||||||    
T  30460875 tttttgtgtctatctttctccaaattgcaaactccatttattttgtcaaa 30460924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 706 - 751
Target Start/End: Original strand, 9954319 - 9954364
Alignment:
Q  706 atacacaatttggagagagataaacacataaaatagatagtgggtc 751  Q
    |||||||| ||  ||||||||| |||||||||||||||||||||||    
T  9954319 atacacaaattaaagagagatagacacataaaatagatagtgggtc 9954364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 715 - 776
Target Start/End: Complemental strand, 17944235 - 17944174
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||||| ||||||||| || |||| ||||||||| ||||| ||| ||||    
T  17944235 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccatc 17944174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 24484956 - 24484891
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||||||| ||||| ||||||  | ||||||| || |||||||||||| ||| ||||    
T  24484956 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatc 24484891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 2e-36; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 329 - 479
Target Start/End: Complemental strand, 11018110 - 11017960
Alignment:
Q  329 ttggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaa 428  Q
    |||||||||||||| |||||||||||| |  |||||||||  |||| ||  ||||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  11018110 ttggcaaatgttaacttgtgctctcaagggcacatgttaaggaacttattatagaaatatacgtattaaaagtcgtgcagtcaacttcttaaaagttaaa 11018011  T
Q  429 ctatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
     ||||||||||||| ||| ||| ||| ||||||| ||||||||||||||||    
T  11018010 ttatcatgttttccaatgcaaagttgctcattttaggttccttaacatgtg 11017960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 681 - 767
Target Start/End: Complemental strand, 39426317 - 39426231
Alignment:
Q  681 tctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggt 767  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  39426317 tctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 39426231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 479 - 598
Target Start/End: Original strand, 45977941 - 45978059
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| | |||||||||||||| |||  |    
T  45977941 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-aataaaatataattaacgatgct 45978039  T
Q  579 gggacccaccatctattttt 598  Q
    ||||||||||||||||||||    
T  45978040 gggacccaccatctattttt 45978059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 333 - 479
Target Start/End: Original strand, 31635438 - 31635584
Alignment:
Q  333 caaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactat 432  Q
    |||||| |||||||||||||||| || |||||||||  || ||||  | ||||||||| | ||||||| |||||| |||||||||||||||||||| |||    
T  31635438 caaatgctaatttgtgctctcaaagatacatgttaaggaattcattatggaaatatacatattaaaagtcgtgcattcaacttcttaaaagttaaaatat 31635537  T
Q  433 catgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
     ||||||||   ||  ||||||||| |||| ||||||||||||||||    
T  31635538 tatgttttctagtgctaaattgttctttttaggttccttaacatgtg 31635584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 12151686 - 12151793
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| |||  ||||||||| ||||||||||| | | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  12151686 gttaagatcctccccatttatgtgtttctccatttattcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 12151784  T
Q  579 gggacccac 587  Q
    |||||||||    
T  12151785 gggacccac 12151793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 583
Target Start/End: Complemental strand, 12381066 - 12380963
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  12381066 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 12380968  T
Q  579 gggac 583  Q
    |||||    
T  12380967 gggac 12380963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 583
Target Start/End: Complemental strand, 12385133 - 12385030
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  12385133 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 12385035  T
Q  579 gggac 583  Q
    |||||    
T  12385034 gggac 12385030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 50484305 - 50484412
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| |||| ||||||||| |||||||||||||   ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||  ||    
T  50484305 gttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgacggt 50484403  T
Q  579 gggacccac 587  Q
    |||||||||    
T  50484404 gggacccac 50484412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 326 - 479
Target Start/End: Original strand, 16394815 - 16394968
Alignment:
Q  326 tttttggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagtt 425  Q
    |||| |||||||| ||| |||||   |||| || |||||||||  |||||||  || |||||||||| ||||||| ||  || || ||||||||||||||    
T  16394815 ttttaggcaaatgctaacttgtgtcttcaaggatacatgttaaggaactcattataaaaatatacgtattaaaagtcgaacagtctacttcttaaaagtt 16394914  T
Q  426 aaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    ||| ||||||||||| | ||| ||| ||||||||||||||||||||||| ||||    
T  16394915 aaattatcatgtttttcaatgcaaagttgttcattttgggttccttaacttgtg 16394968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 479 - 583
Target Start/End: Complemental strand, 7841866 - 7841763
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| |||||||| ||||||| | ||| ||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  7841866 gttaggattctctccatttatatgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 7841768  T
Q  579 gggac 583  Q
    |||||    
T  7841767 gggac 7841763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 40328195 - 40328304
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaat-acacataaaatctttaaaaagagtaaaatataattaatgattg 577  Q
    |||||||| |||||||||||||| ||||| |||||||   ||||||||| |||||  |||||||||||||| ||||| |||||||||||| ||||||| |    
T  40328195 gttaagatcctcttcatttatgtgtttcttcatttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgatgg 40328294  T
Q  578 tgggacccac 587  Q
    ||| ||||||    
T  40328295 tggaacccac 40328304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 677 - 748
Target Start/End: Original strand, 35534748 - 35534817
Alignment:
Q  677 atcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgg 748  Q
    |||||||||||||||||||||||||| || ||||||||||  ||||||||| ||||||||||||||||||||    
T  35534748 atcctctccatttgataaaataaatggaagtacacaattt--agagagatagacacataaaatagatagtgg 35534817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 333 - 476
Target Start/End: Original strand, 1035565 - 1035708
Alignment:
Q  333 caaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactat 432  Q
    |||||||||| |||||| ||||| |  |||||||||  |||||||  ||||||||||| | | ||||| | |||| ||||||| |||||||||||| |||    
T  1035565 caaatgttaacttgtgccctcaagggcacatgttaaggaactcattatagaaatatacatatcaaaagtcttgcattcaacttattaaaagttaaaatat 1035664  T
Q  433 catgttttccgatgtaaaattgttcattttgggttccttaacat 476  Q
     || |||| ||||| ||| |||||| ||||||||| ||||||||    
T  1035665 tatatttttcgatgcaaagttgttctttttgggtttcttaacat 1035708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 482 - 584
Target Start/End: Original strand, 2845187 - 2845289
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctacca-tttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgg 580  Q
    ||||| |||| ||||||||| |||||| ||||||| || |||||||| ||||||||||| ||||| ||| |||| |||||||||||||||||||| ||||    
T  2845187 aagatcctctccatttatgtttttctctatttctatcaatttggagagataaatacacacaaaat-tttgaaaatagtaaaatataattaatgatggtgg 2845285  T
Q  581 gacc 584  Q
    ||||    
T  2845286 gacc 2845289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 488 - 587
Target Start/End: Complemental strand, 23862103 - 23862004
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    ||||||||| |||| |||||| |||||| | ||||||| | ||||| |||||||||||||| ||||| | |||||||||||||||||| |||||| ||||    
T  23862103 ctcttcattcatgtgtttctctatttcttcaatttggaaagataaagacacataaaatcttgaaaaaaaataaaatataattaatgatggtgggatccac 23862004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 479 - 580
Target Start/End: Complemental strand, 48327310 - 48327209
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| |||| ||||||||| ||| || |||||| ||||||||||| |||||   |||||||||||| ||||| | |||||||||||||||||| ||    
T  48327310 gttaagatcctctccatttatgtgtttatcaatttcttccatttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatgatggt 48327211  T
Q  579 gg 580  Q
    ||    
T  48327210 gg 48327209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 360 - 476
Target Start/End: Complemental strand, 36012553 - 36012437
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcat 459  Q
    |||||||||| |||| ||  |||||||||| || || |||| ||| ||||||||||||||||| ||||| |||| |||||||| ||| | | ||||||||    
T  36012553 acatgttaaagaacttattatagaaatataagtattgaaagtcgtacaatcaacttcttaaaaattaaattatcgtgttttccaatgcatagttgttcat 36012454  T
Q  460 tttgggttccttaacat 476  Q
    ||| | |||||||||||    
T  36012453 tttagattccttaacat 36012437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 380 - 475
Target Start/End: Original strand, 4084742 - 4084837
Alignment:
Q  380 tagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaaca 475  Q
    ||||||||||||| ||||||| |||| | ||||||| ||||||||||||  |||||||||| | ||||||| ||| | ||||||||||| ||||||    
T  4084742 tagaaatatacgtattaaaagtcgtgtagtcaactttttaaaagttaaataatcatgtttttcaatgtaaatttgcttattttgggttctttaaca 4084837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 488 - 575
Target Start/End: Complemental strand, 50294210 - 50294124
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    |||| |||||| || |||||| |||||| ||||||||||| ||||| |||||||||||||| ||||| | ||||||||||||||||||    
T  50294210 ctctccatttacgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaaaaa-aataaaatataattaatgat 50294124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 676 - 765
Target Start/End: Original strand, 26860014 - 26860102
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgg 765  Q
    |||| |||| ||||||||||||||||| |  |||| |||||| ||||||||| |||||||||||||||||| |||| || ||||||||||    
T  26860014 gatcatctctatttgataaaataaatggag-tacataatttgaagagagatagacacataaaatagatagtaggtcctatcactaagtgg 26860102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 333 - 479
Target Start/End: Original strand, 16583152 - 16583298
Alignment:
Q  333 caaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactat 432  Q
    ||||| |||||||||| ||||||    |||||||||  |||| ||  || ||| |||||| | ||||| |||| | |||||||||||| ||||||| |||    
T  16583152 caaatattaatttgtgttctcaaaagcacatgttaaggaacttattataaaaacatacgtatcaaaagtcgtgtagtcaacttcttaatagttaaattat 16583251  T
Q  433 catgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||||||  || |||| ||| ||| ||||| ||||||||||||||    
T  16583252 catgttttctaatttaaagttgctcaatttggattccttaacatgtg 16583298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 710 - 771
Target Start/End: Complemental strand, 24977318 - 24977257
Alignment:
Q  710 acaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttcca 771  Q
    ||||||| |||||||||| ||||| ||||||||| |||| || |||||||||||||||||||    
T  24977318 acaatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttcca 24977257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 577 - 641
Target Start/End: Original strand, 40328311 - 40328376
Alignment:
Q  577 gtgggacccaccatctatttttgtgtctatcttttcaaattg-taaactccatttattttgtcaaa 641  Q
    |||||||||||||||||||||||||||||||| | ||| |||  ||||||||||||||||| ||||    
T  40328311 gtgggacccaccatctatttttgtgtctatctctccaatttgcaaaactccatttattttgccaaa 40328376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 676 - 765
Target Start/End: Original strand, 50294026 - 50294115
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgg 765  Q
    |||||||| ||||||  |||||||||| | ||   ||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||||||    
T  50294026 gatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgg 50294115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 587
Target Start/End: Original strand, 24977187 - 24977266
Alignment:
Q  507 tccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||||||||  ||||| |||| ||||||||| |||||||||| ||||| | |||||||||| |||||||||||| ||||||    
T  24977187 tccatttcttacatttagagagataaataca-ataaaatcttgaaaaaaaataaaatataactaatgattgtggaacccac 24977266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 479
Target Start/End: Original strand, 25366730 - 25366878
Alignment:
Q  331 ggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaact 430  Q
    |||||| ||||| |||||||||||| || |||||||||  ||||||   ||||| ||| ||| | ||||| |||| ||| ||||| ||||||||||||||    
T  25366730 ggcaaacgttaacttgtgctctcaaggacacatgttaaggaactcaatatagaattatccgtatcaaaagtcgtgtaataaactttttaaaagttaaact 25366829  T
Q  431 atcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    || |||||| || || |||| ||  || ||||  ||| |||||||||||    
T  25366830 attatgtttcccaatataaatttactctttttaagtttcttaacatgtg 25366878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 480
Target Start/End: Complemental strand, 26176426 - 26176326
Alignment:
Q  380 tagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||||||| || |||| || |||||| ||| ||| |||||||| ||| ||| ||||||| | ||| |||||||||  |||| ||||||||||||||||    
T  26176426 tagaaatatatgtcttaatagccgtgcattcatctttttaaaagtcaaaatattatgtttttcaatgcaaaattgttactttttggttccttaacatgtg 26176327  T
Q  480 t 480  Q
    |    
T  26176326 t 26176326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 776
Target Start/End: Original strand, 32887744 - 32887843
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||| |||||||||||||||||| |  |||||| ||| |||| ||||| |||||||||||| ||||||| || ||||| ||| ||||| ||| |||    
T  32887744 gatcctcttcatttgataaaataaatggag-tacacagtttagagaaagatagacacataaaataaatagtggatcctaccattaaatgggtcccaccat 32887842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 440
Target Start/End: Complemental strand, 28490662 - 28490556
Alignment:
Q  333 caaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactat 432  Q
    |||||| ||||||||||||| || || |||||||||  || ||||  ||||||||||| | | ||||  |||||||||||||||| |||||||||| |||    
T  28490662 caaatgctaatttgtgctcttaatgacacatgttaaggaattcattatagaaatatacatatcaaaat-cgtgcaatcaacttctaaaaagttaaaatat 28490564  T
Q  433 catgtttt 440  Q
     |||||||    
T  28490563 tatgtttt 28490556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 710 - 764
Target Start/End: Complemental strand, 52854790 - 52854736
Alignment:
Q  710 acaatttggagagagataaacacataaaatagatagtgggtcataccactaagtg 764  Q
    |||||||||||| |||||||||||||||| | |||||||||| ||| ||||||||    
T  52854790 acaatttggagaaagataaacacataaaacatatagtgggtcctactactaagtg 52854736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 479 - 548
Target Start/End: Complemental strand, 1609694 - 1609625
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctt 548  Q
    |||||||| ||||||||||||||||||  ||||||||  ||||| ||||  |||| ||||||||||||||    
T  1609694 gttaagatcctcttcatttatgtcttttcccatttctttcatttagagaggtaaagacacataaaatctt 1609625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 715 - 776
Target Start/End: Complemental strand, 12151840 - 12151779
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||| | ||||| ||||||||| ||||||| ||||||||||||||| ||| ||||    
T  12151840 ttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatc 12151779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 482 - 587
Target Start/End: Complemental strand, 46608525 - 46608426
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtggg 581  Q
    ||||| |||| ||||||||||   |||||||||| ||||||||||||||||| ||||   |||  ||| |||| ||||||| |||||||||||| |||||    
T  46608525 aagatcctctccatttatgtc---ctccatttcttccatttggagaaataaagacac---aaagttttgaaaaaagtaaaaaataattaatgatggtggg 46608432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 479
Target Start/End: Complemental strand, 41884780 - 41884637
Alignment:
Q  336 atgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcat 435  Q
    ||||||| |||||| ||||| |  ||||||||| ||||||||  |||||| |||| | | ||||| | |||| |  ||||||||||||||||| |||  |    
T  41884780 atgttaacttgtgccctcaatggcacatgttaagtaactcattatagaaacatacatatcaaaagtcatgcatttgacttcttaaaagttaaaatatttt 41884681  T
Q  436 gttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
     |||||| ||| ||| |||||  | || ||||||||||||||||    
T  41884680 attttccaatgcaaagttgtttttgttaggttccttaacatgtg 41884637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 767
Target Start/End: Original strand, 48327117 - 48327208
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggt 767  Q
    |||| ||||||||||  |||||||||| | ||   ||| ||||||||||||| ||| | ||||||||| ||| ||| |||||||||||||||    
T  48327117 gatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggt 48327208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 296 - 330
Target Start/End: Original strand, 27760359 - 27760393
Alignment:
Q  296 tataatgtatcaattgatgtgattaaatacttttt 330  Q
    |||||| ||||||||||||||||||||||||||||    
T  27760359 tataatatatcaattgatgtgattaaatacttttt 27760393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 403 - 481
Target Start/End: Original strand, 31262626 - 31262704
Alignment:
Q  403 gtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtgtt 481  Q
    ||||| ||||||||||||||||| |  ||| ||||||||| ||| |||||||||  |||| ||||  ||||||||||||    
T  31262626 gtgcattcaacttcttaaaagttgacatattatgttttccaatgcaaaattgttttttttaggttgtttaacatgtgtt 31262704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 814 - 870
Target Start/End: Complemental strand, 39426185 - 39426128
Alignment:
Q  814 tctatatatctccaaatggaaaaattgagaggatac-aaatgaagaaaatcttgactt 870  Q
    ||||||| |||||||||||| |||| |||||||||| ||||| |||| ||||||||||    
T  39426185 tctatatctctccaaatggagaaatggagaggatacaaaatggagaagatcttgactt 39426128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 42066648 - 42066713
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagtt 425  Q
    |||| ||||| |||||||| ||||||||||  | ||||||| |||||| ||||| |||||||||||    
T  42066648 acatattaaagaactcataatagaaatatatatattaaaagtcgtgcattcaacatcttaaaagtt 42066713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 5e-34; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 479 - 608
Target Start/End: Original strand, 12153090 - 12153219
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  12153090 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 12153188  T
Q  579 gggacccaccatct-atttttgtgtctatct 608  Q
    |||||||||||||| ||||||||||||||||    
T  12153189 gggacccaccatctaatttttgtgtctatct 12153219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 470 - 587
Target Start/End: Complemental strand, 12241573 - 12241457
Alignment:
Q  470 ttaacatgtgttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataatt 569  Q
    |||||| | |||| ||| |||||||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||    
T  12241573 ttaacaagggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataatt 12241475  T
Q  570 aatgattgtgggacccac 587  Q
    |||||| |||||||||||    
T  12241474 aatgatggtgggacccac 12241457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 19902074 - 19901967
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| |||| ||||||||| |||||| |||||| | ||||||||| ||||| ||||||||||| ||| |||| |||||||||||||||||||| ||    
T  19902074 gttaagatcctctccatttatgtgtttctctatttcttcaatttggagagataaagacacataaaat-tttgaaaaaagtaaaatataattaatgatggt 19901976  T
Q  579 gggacccac 587  Q
    |||||||||    
T  19901975 gggacccac 19901967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 488 - 587
Target Start/End: Original strand, 34778349 - 34778447
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||| ||||||||| ||||||||||||| | || |||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  34778349 ctctccatttatgtgtttctccatttcttcaatgtggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggtgggacccac 34778447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 494 - 587
Target Start/End: Complemental strand, 5416608 - 5416514
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacacataaaatcttta-aaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||||||| ||||||||||||| | ||||||| | ||||| |||||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  5416608 atttatgtgtttctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgatggtgggacccac 5416514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 23610561 - 23610668
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| |||| ||||||| | ||||||||||||| | ||||||||| ||||| | |||||||||||| ||||| ||||||||||| |||||||| ||    
T  23610561 gttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagatacataaaatcttgaaaaa-agtaaaatatatttaatgatggt 23610659  T
Q  579 gggacccac 587  Q
    |||||||||    
T  23610660 gggacccac 23610668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 23610754 - 23610654
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    ||||||||||||||||||||||||||| |  |   ||| ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||| |||    
T  23610754 gatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 23610655  T
Q  776 c 776  Q
    |    
T  23610654 c 23610654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 496 - 587
Target Start/End: Complemental strand, 3952309 - 3952219
Alignment:
Q  496 ttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||| |||||||    
T  3952309 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggtgagacccac 3952219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 493 - 587
Target Start/End: Complemental strand, 5763304 - 5763211
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    ||||||| | ||||||||||||| | ||||||||| ||||| ||||||||||| ||| |||| |||||||||||||||||||| |||||||||||    
T  5763304 catttatatgtttctccatttcttcaatttggagagataaagacacataaaat-tttgaaaaaagtaaaatataattaatgatggtgggacccac 5763211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 321 - 479
Target Start/End: Original strand, 22019374 - 22019532
Alignment:
Q  321 aatactttttggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaa 420  Q
    |||| |||| |||||||| ||| |||||| ||||| || |||||||||| |||||||  |||||||||| |  ||||||  ||| || ||||||||| ||    
T  22019374 aatatttttaggcaaatgctaacttgtgccctcaaggacacatgttaaagaactcattatagaaatatatgcattaaaaatcgtacattcaacttctaaa 22019473  T
Q  421 aagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    || | |||||||||| |||||| |||||||||||  | ||| ||||| |||||||||||    
T  22019474 aaatgaaactatcatattttccaatgtaaaattgcccttttcgggtttcttaacatgtg 22019532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 479 - 573
Target Start/End: Original strand, 52018702 - 52018795
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatg 573  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  52018702 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaa-agtaaaatataattaatg 52018795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 487 - 584
Target Start/End: Complemental strand, 33262700 - 33262604
Alignment:
Q  487 tctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacc 584  Q
    ||||| ||||||||| ||| || |||||| | ||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  33262700 tctctccatttatgtatttttctatttcttcaatttggagagataaagacacataaaat-tttaaaaaaagtaaaatataattaatgatggtgggacc 33262604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 479 - 580
Target Start/End: Original strand, 39862436 - 39862536
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||||||||||||| ||||||  ||||| | ||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||| ||    
T  39862436 gttaggatcctcttcatttatgtgtttctcattttcttcaatttggagagataaagacacataaaatc-ttaaaaaaagtaaaatataattaatgatggt 39862534  T
Q  579 gg 580  Q
    ||    
T  39862535 gg 39862536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 18207196 - 18207089
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| |||||| |||||| | ||||||| | ||||| |||||||||||||| |||||| |||||||||||||||||||  |    
T  18207196 gttaggatcctctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaag-gtaaaatataattaatgatgat 18207098  T
Q  579 gggacccac 587  Q
    |||||||||    
T  18207097 gggacccac 18207089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 480 - 580
Target Start/End: Complemental strand, 38079875 - 38079776
Alignment:
Q  480 ttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtg 579  Q
    ||||||| |||| ||||||||  ||||||||||| | | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| |||    
T  38079875 ttaagatcctctccatttatgcgtttctccattttttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggtg 38079777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 56558198 - 56558305
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||| | |||||| |||||| | ||||||||| ||||| ||||||||||| || ||||| |||||||||||||||||||| ||    
T  56558198 gttaggatcctctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaa-agtaaaatataattaatgatggt 56558296  T
Q  579 gggacccac 587  Q
    |||||||||    
T  56558297 gggacccac 56558305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 332 - 479
Target Start/End: Complemental strand, 27918501 - 27918354
Alignment:
Q  332 gcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaacta 431  Q
    ||||||| ||| |||||| ||||| || |||||||||  ||||| |  |||||||||| || | ||||| |||||| | |||||||||||||||||| ||    
T  27918501 gcaaatgctaacttgtgccctcaaggacacatgttaaggaactcgttatagaaatatatgtatcaaaagtcgtgcattaaacttcttaaaagttaaaata 27918402  T
Q  432 tcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    | || |||| | ||| ||||||| || |||||| ||||||||||||||    
T  27918401 ttatatttttcaatgcaaaattgctctttttggattccttaacatgtg 27918354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 667 - 776
Target Start/End: Original strand, 19901872 - 19901981
Alignment:
Q  667 atgggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtggg 766  Q
    |||||| | ||||||||||||||| ||||||||||| |  |   ||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||    
T  19901872 atgggtgaagatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggg 19901971  T
Q  767 ttccatcatc 776  Q
    | ||| ||||    
T  19901972 tcccaccatc 19901981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 396 - 479
Target Start/End: Original strand, 29508724 - 29508807
Alignment:
Q  396 aaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    ||||| |||| | ||||||||||||||||| || ||| ||||||||| ||| ||||||| || |||||||||||||||||||||    
T  29508724 aaaagtcgtgtattcaacttcttaaaagtttaaatattatgttttccaatgcaaaattgctctttttgggttccttaacatgtg 29508807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 406 - 481
Target Start/End: Complemental strand, 29818547 - 29818472
Alignment:
Q  406 caatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtgtt 481  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||| || |||||||| | ||||||||||| ||||    
T  29818547 caatcaacttcttaaaagttaaattatcatgttttccaatgcaaatttattcattttagattccttaacatatgtt 29818472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 666 - 776
Target Start/End: Original strand, 5416419 - 5416528
Alignment:
Q  666 catgggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgg 765  Q
    ||||||| | |||||||||||||||| |||||||||| |  |   ||| ||||||||||||| ||||| ||||||||| ||||||| |||||||||||||    
T  5416419 catgggtgaagatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacaca-aaaatagattgtgggtcctaccactaagtgg 5416517  T
Q  766 gttccatcatc 776  Q
    || ||| ||||    
T  5416518 gtcccaccatc 5416528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 669 - 739
Target Start/End: Original strand, 15178629 - 15178699
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaat 739  Q
    |||||| ||| |||||||||||||||||| |||| || |||| |||||| |||||||||||||||||||||    
T  15178629 gggttaggattctctccatttgataaaatgaatggaagtacataatttgaagagagataaacacataaaat 15178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 719 - 776
Target Start/End: Complemental strand, 30567970 - 30567913
Alignment:
Q  719 agagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  30567970 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatc 30567913  T

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Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 494 - 587
Target Start/End: Complemental strand, 31862361 - 31862269
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||||| || ||||| |||||||||||||||||| ||| | ||||| ||||| |||| ||| ||||||| |||||||||||| |||||||||||    
T  31862361 atttatatccttctctatttctaccatttggagagatatagacacacaaaat-tttagaaaaagtaaaaaataattaatgatggtgggacccac 31862269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 479 - 586
Target Start/End: Complemental strand, 33247284 - 33247180
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| ||||||||||||    |||| | |||||||||||||||||| ||    
T  33247284 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc---gaaaaaaataaaatataattaatgatggt 33247188  T
Q  579 gggaccca 586  Q
    || |||||    
T  33247187 ggaaccca 33247180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 723 - 776
Target Start/End: Original strand, 47922085 - 47922138
Alignment:
Q  723 agataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  47922085 agataaacacaaaaaatagatagtgggtcttaccactaagtgggttccaccatc 47922138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 676 - 776
Target Start/End: Original strand, 18207003 - 18207103
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||| |||||||||| |  |   ||| || |||||||||| ||| | ||||||||| ||||||| ||||||||||||||| |||||||    
T  18207003 gatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 18207102  T
Q  776 c 776  Q
    |    
T  18207103 c 18207103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 671 - 771
Target Start/End: Complemental strand, 36532741 - 36532642
Alignment:
Q  671 gttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttcc 770  Q
    |||| |||||||||||| |||||||||||||| |  | |||||||| |||||||||| |||||||||||| ||||||| || || || | ||||||||||    
T  36532741 gttaagatcctctccatctgataaaataaatggagtt-cacaatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttcc 36532643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 677 - 763
Target Start/End: Original strand, 5815267 - 5815350
Alignment:
Q  677 atcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagt 763  Q
    ||||||||||||||||||||||||||  | |||| ||||| |||||||||| ||||  |||||| ||| ||||||||||||||||||    
T  5815267 atcctctccatttgataaaataaatg-gagtacaaaattttgagagagatagacac--aaaatatataatgggtcataccactaagt 5815350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 493 - 575
Target Start/End: Complemental strand, 17080782 - 17080701
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    ||||||||| ||||||||||||| | ||||||||| ||||| ||| ||||||||||  |||| ||||||||||||| ||||||    
T  17080782 catttatgtgtttctccatttcttcaatttggagagataaagacagataaaatcttggaaaa-agtaaaatataatgaatgat 17080701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 482 - 587
Target Start/End: Original strand, 24073539 - 24073642
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtggg 581  Q
    ||||| |||| ||||||||| |||||| |||||| ||||||||||| || ||  ||||||||||||| ||||| |  || |||||||||||||| | |||    
T  24073539 aagatcctctccatttatgtgtttctcaatttcttccatttggagagatgaaggcacataaaatcttgaaaaaaa--aatatataattaatgatggcggg 24073636  T
Q  582 acccac 587  Q
    ||||||    
T  24073637 acccac 24073642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 671 - 776
Target Start/End: Original strand, 47922324 - 47922430
Alignment:
Q  671 gttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataa-aatagatagtgggtcataccactaagtgggttc 769  Q
    |||| ||||||||||||||| ||||||||||  |  |   ||||||||||||| ||| ||||| || ||||||| ||||||| ||||||||||||||| |    
T  47922324 gttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcc 47922423  T
Q  770 catcatc 776  Q
    |||||||    
T  47922424 catcatc 47922430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 331 - 428
Target Start/End: Original strand, 1961605 - 1961702
Alignment:
Q  331 ggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaa 428  Q
    ||||||||||||||||||| ||||| |  |||||||||| |||| ||  ||||||||||  | | ||||| |||||| ||||||||| ||||||||||    
T  1961605 ggcaaatgttaatttgtgccctcaagggcacatgttaaaaaacttattatagaaatataaatatcaaaagtcgtgcattcaacttctaaaaagttaaa 1961702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 487 - 568
Target Start/End: Complemental strand, 12312651 - 12312571
Alignment:
Q  487 tctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataat 568  Q
    ||||| ||||||||| ||||||||||||| | |||| |||| ||||| ||||||||||| ||| |||| |||||||||||||    
T  12312651 tctctccatttatgtgtttctccatttcttcaatttagagagataaagacacataaaat-tttgaaaaaagtaaaatataat 12312571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 1871388 - 1871289
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    ||||||||| |||||| |||||||||| |  ||  ||||||||||||||||| ||| | || ||||||||||| || ||| ||||||||||| |||||||    
T  1871388 gatcctctcaatttgacaaaataaatggag-tatgcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtcccatcat 1871290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 667 - 767
Target Start/End: Original strand, 3952124 - 3952224
Alignment:
Q  667 atgggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtggg 766  Q
    |||||| | |||||||||||||||  |||||||||| |  |   ||| ||||||||||||| ||| | ||||||||| ||||||| ||||||||||||||    
T  3952124 atgggtgaagatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtggg 3952223  T
Q  767 t 767  Q
    |    
T  3952224 t 3952224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 56558391 - 56558291
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| |  |   ||| ||||||||||||| ||||| ||||||||| ||||||| || |||||||||||| ||| |||    
T  56558391 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtgggtcccaccat 56558292  T
Q  776 c 776  Q
    |    
T  56558291 c 56558291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 36937552 - 36937481
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaacta 431  Q
    |||||||||  |||||||  |||||||||| || | |||| ||||||| |||||||||||||||||||||||    
T  36937552 acatgttaacaaactcattatagaaatatatgtataaaaaaacgtgcattcaacttcttaaaagttaaacta 36937481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 478
Target Start/End: Original strand, 36989829 - 36989976
Alignment:
Q  332 gcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagtt-aaact 430  Q
    ||||||||||| |||||  ||||| |  |||| ||||  |||||||  || |||||||| | ||||||| |||||| ||||||||||||||||| ||| |    
T  36989829 gcaaatgttaacttgtgtcctcaagggcacatattaagaaactcattataaaaatatacatattaaaagtcgtgcattcaacttcttaaaagttcaaaat 36989928  T
Q  431 atcatgttttccgatgtaaaattgttcattttgggttccttaacatgt 478  Q
    || ||||||||| ||| ||| |||  | |||| | |||||||||||||    
T  36989929 attatgttttccaatgcaaagttgcactttttagattccttaacatgt 36989976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 710 - 776
Target Start/End: Original strand, 5763159 - 5763225
Alignment:
Q  710 acaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    |||| ||||||||||||| | ||| ||||||||| ||||||| ||||||||||||||| ||| ||||    
T  5763159 acaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 5763225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 494 - 587
Target Start/End: Complemental strand, 47922216 - 47922124
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||||||| ||||||||||||| | |||| |||| ||||| |||| |||||| || ||||| | ||||||||| |||||||| |||| ||||||    
T  47922216 atttatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatattgaaaaa-aataaaatatatttaatgatggtggaacccac 47922124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 56269074 - 56269139
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||||||| ||||| ||||||  | ||||||| ||||||||||||||| ||| ||||    
T  56269074 caatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatc 56269139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 715 - 767
Target Start/End: Complemental strand, 24073689 - 24073637
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggt 767  Q
    ||||||||||||| |||||  |||||||| ||||||| |||||||||||||||    
T  24073689 ttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggt 24073637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 25442331 - 25442271
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacaca 539  Q
    |||||||| |||| |||||||| | |||||||||||| ||||||||||| ||||| |||||    
T  25442331 gttaagatcctctccatttatggccttctccatttcttccatttggagagataaagacaca 25442271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 676 - 776
Target Start/End: Original strand, 33247093 - 33247193
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| |  |   ||| ||||||||||||| |||||  |||||||| ||||||  ||||||||| ||||||||| |||    
T  33247093 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccat 33247192  T
Q  776 c 776  Q
    |    
T  33247193 c 33247193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 34778533 - 34778433
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| |  |   ||| ||| ||||||||| ||||| ||||||||| |||| || ||||||||||||||| ||| |||    
T  34778533 gatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 34778434  T
Q  776 c 776  Q
    |    
T  34778433 c 34778433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 330
Target Start/End: Original strand, 12096070 - 12096105
Alignment:
Q  295 ttataatgtatcaattgatgtgattaaatacttttt 330  Q
    ||||||| ||||||||||||||||||||||||||||    
T  12096070 ttataatatatcaattgatgtgattaaatacttttt 12096105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 479
Target Start/End: Original strand, 24940690 - 24940773
Alignment:
Q  396 aaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    ||||| |||||| |||||||||||||||||||  ||| ||||||| | ||| ||| ||| || |||||| || |||||||||||    
T  24940690 aaaagtcgtgcattcaacttcttaaaagttaatatattatgtttttcaatgcaaacttgctctttttggattgcttaacatgtg 24940773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 769
Target Start/End: Original strand, 36003244 - 36003302
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttc 769  Q
    ||||||||||||||||||| ||| |||||| ||| ||||||||  || |||||||||||    
T  36003244 caatttggagagagataaatacaaaaaataaatattgggtcatgtcattaagtgggttc 36003302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 430 - 480
Target Start/End: Complemental strand, 36937199 - 36937149
Alignment:
Q  430 tatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtgt 480  Q
    ||||||||||||| ||||||||||| ||  |||| ||||||||||||||||    
T  36937199 tatcatgttttccaatgtaaaattgctctgtttgagttccttaacatgtgt 36937149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 493 - 575
Target Start/End: Complemental strand, 43447722 - 43447641
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    |||||||||||||||| ||| ||   |||| |||| ||||| ||||||||||  ||| |||| ||||||||||||||||||||    
T  43447722 catttatgtctttctctatt-cttttatttcgagagataaagacacataaaaattttgaaaaaagtaaaatataattaatgat 43447641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 54719739 - 54719665
Alignment:
Q  380 tagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattg 454  Q
    ||||||||||| | ||||||| |||  | |||||||||||||||||||| |||||| |||| | ||| |||||||    
T  54719739 tagaaatatacttattaaaagtcgtatagtcaacttcttaaaagttaaattatcatatttttcaatgcaaaattg 54719665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 608
Target Start/End: Original strand, 5361438 - 5361491
Alignment:
Q  556 agtaaaatataattaatgattgtgggacccaccatcta-tttttgtgtctatct 608  Q
    ||||||| |||||||||||| |||||||||||||  || |||||||||||||||    
T  5361438 agtaaaaaataattaatgatggtgggacccaccacttattttttgtgtctatct 5361491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 24743983 - 24744068
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgtt 456  Q
    |||||||  ||||||||||||  ||||||| ||| || |||||||||| ||| ||||| | | ||||||||| ||| |||||||||    
T  24743983 aactcattatagaaatatacgcattaaaagtcgtacattcaacttctttaaaattaaaatgttatgttttccaatgcaaaattgtt 24744068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 505 - 586
Target Start/End: Complemental strand, 33841934 - 33841854
Alignment:
Q  505 tctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggaccca 586  Q
    ||||||||||  ||||||||| | ||||| ||||| |||||||| |||| ||||| |  |||||||||||| ||||||||||    
T  33841934 tctccatttcctccatttggaaagataaagacacaaaaaatcttgaaaa-gagtatacaataattaatgatggtgggaccca 33841854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 56453818 - 56453883
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||||||| ||||| ||||||| | ||||||| || || ||||||||| ||| ||||    
T  56453818 caatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggtcccaccatc 56453883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 5e-34; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 333 - 479
Target Start/End: Complemental strand, 44068946 - 44068800
Alignment:
Q  333 caaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactat 432  Q
    ||||||||||||||||||||||| || |||||||||  || ||||  |||||||||| || | ||||| ||||||||||||||||||||||||||| |||    
T  44068946 caaatgttaatttgtgctctcaaagacacatgttaaggaattcattatagaaatatatgtatcaaaagtcgtgcaatcaacttcttaaaagttaaattat 44068847  T
Q  433 catgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||||| | ||| ||| ||||||||||| | ||||||||||||||    
T  44068846 catgtttttcaatgcaaagttgttcattttagattccttaacatgtg 44068800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 488 - 598
Target Start/End: Original strand, 39465703 - 39465812
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||| ||||||||| ||||||||||| | | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  39465703 ctctccatttatgtgtttctccattttttcaatttggagagataaaaacacataaaatcttgaaaaa-agtaaaatataattaatgatggtgggacccac 39465801  T
Q  588 catctattttt 598  Q
    |||||||||||    
T  39465802 catctattttt 39465812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 482 - 587
Target Start/End: Original strand, 28564813 - 28564918
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtggg 581  Q
    ||||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||| |||||    
T  28564813 aagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatggtggg 28564912  T
Q  582 acccac 587  Q
    ||||||    
T  28564913 acccac 28564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 670 - 765
Target Start/End: Complemental strand, 30709228 - 30709133
Alignment:
Q  670 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgg 765  Q
    ||||| |||||||||||| | ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  30709228 ggttaggatcctctccatcttataaaatcaatgaaagtacacaatttggagagagatagacacataaaatagatattgggtcctaccactaagtgg 30709133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 482 - 607
Target Start/End: Complemental strand, 374591 - 374466
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtggg 581  Q
    |||||||||| ||||||||| ||||||| |||||  ||||| |||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||    
T  374591 aagattctctccatttatgtgtttctccctttctttcatttagagagataaaaacacataaaatcttgaaaaa-agtaaaatataattaatgattgtagg 374493  T
Q  582 acccaccatcta-tttttgtgtctatc 607  Q
    | |||| || || ||||||||||||||    
T  374492 atccacaatatattttttgtgtctatc 374466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 331 - 479
Target Start/End: Original strand, 25626468 - 25626616
Alignment:
Q  331 ggcaaatgttaatttgtgctctcaacgag-acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaac 429  Q
    |||||||| ||| |||||| ||||| ||| |||||||||| |||| ||  | ||||||||||| | ||||| |||| | ||||||||||||||||||||     
T  25626468 ggcaaatgctaacttgtgccctcaa-gagcacatgttaaagaacttattattgaaatatacgtatcaaaagtcgtgtagtcaacttcttaaaagttaaat 25626566  T
Q  430 tatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    ||||||||||||| ||  ||| ||||||||||| ||||||||||||||||    
T  25626567 tatcatgttttccaattcaaagttgttcattttaggttccttaacatgtg 25626616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 677 - 768
Target Start/End: Original strand, 4446860 - 4446951
Alignment:
Q  677 atcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggtt 768  Q
    |||||||||||||||||||||||||| || |  |||||||| ||||||||| |||||||||||||||||||| || ||||||||| ||||||    
T  4446860 atcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtt 4446951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 15079863 - 15079972
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttcct 470  Q
    |||||||||||||||||||| |   ||||| |||||| ||||||||||||||||||||||||||| |||| | ||||||||||| || |||| |||| ||    
T  15079863 aactcatagtagaaatatacatagcaaaagtcgtgcattcaacttcttaaaagttaaactatcatatttttcaatgtaaaattgctctttttaggtttct 15079962  T
Q  471 taacatgtgt 480  Q
    ||||| ||||    
T  15079963 taacacgtgt 15079972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 35316744 - 35316851
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| |||||| || ||||||||||||| | ||||||||| ||||| ||| |||||||||| ||||| |||||||||||||||||||| ||    
T  35316744 gttaggatcctctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaa-agtaaaatataattaatgatggt 35316842  T
Q  579 gggacccac 587  Q
    |||||||||    
T  35316843 gggacccac 35316851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 482 - 587
Target Start/End: Original strand, 13238603 - 13238707
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtggg 581  Q
    ||||| |||| ||||||||  |||||| |||||| | ||||||||| ||||| |||||||||||||| ||||| | |||||||||||||||||| |||||    
T  13238603 aagatcctctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaa-aataaaatataattaatgatggtggg 13238701  T
Q  582 acccac 587  Q
    ||||||    
T  13238702 acccac 13238707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 15709845 - 15709780
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||||||    
T  15709845 caatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatc 15709780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 330 - 479
Target Start/End: Complemental strand, 39420360 - 39420211
Alignment:
Q  330 tggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaac 429  Q
    ||||||||| ||| |||| | ||||| |  |||||||||  |||||||  ||||||||||| | ||||| | |||||| |||||||||| |||||||||     
T  39420360 tggcaaatgctaacttgttcgctcaagggcacatgttaaggaactcattatagaaatatacatattaaatgtcgtgcattcaacttcttgaaagttaaaa 39420261  T
Q  430 tatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    ||| ||||||||| ||| ||| ||| || |||| ||||||||||||||||    
T  39420260 tattatgttttccaatgcaaagttgctctttttaggttccttaacatgtg 39420211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 330 - 478
Target Start/End: Original strand, 30549051 - 30549201
Alignment:
Q  330 tggcaaatgttaatttgtgctctcaacgag--acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaa 427  Q
    ||||||||||||| |||||||| ||| |    |||||||||  ||||| |  ||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  30549051 tggcaaatgttaacttgtgctcacaagggcgcacatgttaaggaactctttatagaaatatacgtatcaaaagtcgtgcaatcaacttcttaaacgttaa 30549150  T
Q  428 actatcatgttttccgatgtaaaattgttcattttgggttccttaacatgt 478  Q
    | |||||||||||   ||| ||| ||| |||||||  ||||||||||||||    
T  30549151 attatcatgttttttaatgcaaatttgctcattttaagttccttaacatgt 30549201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 669 - 747
Target Start/End: Complemental strand, 30217592 - 30217514
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtg 747  Q
    |||||| ||||||||| ||||||||||||||||| ||  ||||||||| ||| |||||| |||||||||||||||||||    
T  30217592 gggttaggatcctctctatttgataaaataaatggaagcacacaatttagagtgagatagacacataaaatagatagtg 30217514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 371 - 479
Target Start/End: Original strand, 14275790 - 14275898
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttcct 470  Q
    |||||||  ||||||||||||| | ||||| | |||| |||||||||||||||||||  ||| ||||||||| ||| ||||||| || ||||||||| ||    
T  14275790 aactcattatagaaatatacgtatcaaaagtcatgcattcaacttcttaaaagttaatatattatgttttccaatgcaaaattgctctttttgggttgct 14275889  T
Q  471 taacatgtg 479  Q
    ||| |||||    
T  14275890 taatatgtg 14275898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 479 - 575
Target Start/End: Complemental strand, 41983495 - 41983401
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    |||||||| |||| ||||||||| |||||||||||||   ||||||||| ||||| |||||| ||||||| ||||| ||||||||||||||||||||    
T  41983495 gttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacat-aaatcttgaaaaa-agtaaaatataattaatgat 41983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 498 - 641
Target Start/End: Complemental strand, 45625199 - 45625053
Alignment:
Q  498 atgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccaccatctattt- 596  Q
    |||| ||||||||||||| | |||| |||| ||||| |||| ||||||||| ||||| | ||||||| |||||||||| ||||||||||| || |||||     
T  45625199 atgtgtttctccatttcttcaatttagagagataaagacacgtaaaatcttgaaaaata-taaaataaaattaatgatggtgggacccacaatttatttc 45625101  T
Q  597 ttgtgtcta--tcttttcaaattgt-aaactccatttattttgtcaaa 641  Q
    |||||||||  ||| | ||| |||| ||||||||||||||||| ||||    
T  45625100 ttgtgtctatctctctccaacttgtaaaactccatttattttgccaaa 45625053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 479 - 620
Target Start/End: Original strand, 12949389 - 12949531
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    ||||||||  ||| ||| ||||||||||||| ||||| | ||||||||| ||||| | |||||||||||| ||||| ||||||| |||||||||||  |     
T  12949389 gttaagatcttctccatctatgtctttctccgtttctcctatttggagagataaagatacataaaatcttgaaaaa-agtaaaa-ataattaatgacggc 12949486  T
Q  579 gggacccaccatcta-tttttgtgtctatctt--ttcaaattgta 620  Q
    ||||||||  ||||| |||||||| |||||||  |||||||||||    
T  12949487 gggacccattatctattttttgtgcctatctttcttcaaattgta 12949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 330 - 479
Target Start/End: Complemental strand, 20061222 - 20061073
Alignment:
Q  330 tggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaac 429  Q
    ||||||||||||| |||||| ||||| |  ||||| |||  |||||||  ||||||||||||| | |||||  ||||| ||||||||||||||||| |      
T  20061222 tggcaaatgttaacttgtgccctcaagggcacatgctaaggaactcattatagaaatatacgtatcaaaagttgtgcattcaacttcttaaaagttgaca 20061123  T
Q  430 tatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    ||| ||||||| | ||| ||| ||| || |||| |||| |||||||||||    
T  20061122 tattatgtttttcaatgcaaagttgctctttttaggttgcttaacatgtg 20061073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 13238793 - 13238693
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| | ||   ||| ||||||||||||| ||||| ||||||||| ||||||| |||||| |||||||| ||| |||    
T  13238793 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccat 13238694  T
Q  776 c 776  Q
    |    
T  13238693 c 13238693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 411 - 479
Target Start/End: Complemental strand, 13487789 - 13487721
Alignment:
Q  411 aacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||||||||||||||| ||| ||||||| | |||||||||||||  ||||| |||||||||||||||    
T  13487789 aacttcttaaaagttaaaatattatgtttttcaatgtaaaattgttatttttgagttccttaacatgtg 13487721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 362 - 476
Target Start/End: Complemental strand, 7743860 - 7743746
Alignment:
Q  362 atgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattt 461  Q
    |||||||| |||||||  |||||||||| |  |  |||| |||||| | |||||||||||||||||| || ||||||||||  || ||| ||| ||||||    
T  7743860 atgttaaagaactcattatagaaatatatgcatcgaaagtcgtgcagttaacttcttaaaagttaaattaccatgttttcccgtgcaaagttgctcattt 7743761  T
Q  462 tgggttccttaacat 476  Q
    |||||| ||||||||    
T  7743760 tgggtttcttaacat 7743746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 670 - 719
Target Start/End: Complemental strand, 6946384 - 6946335
Alignment:
Q  670 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttgga 719  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  6946384 ggttaggatcctccccatttgataaaataaatgaaaatgcacaatttgga 6946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 582
Target Start/End: Original strand, 10877621 - 10877724
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatct-ttaaaaagagtaaaatataattaatgattg 577  Q
    |||| ||| |||||||||||||| ||||||||||||| | ||||||||| ||||| ||||||||||| |   ||||| | | |||||||||||||||| |    
T  10877621 gttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaa-acacataaaatttaaaaaaaaaaatgaaatataattaatgatgg 10877719  T
Q  578 tggga 582  Q
    |||||    
T  10877720 tggga 10877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 776
Target Start/End: Original strand, 21454494 - 21454557
Alignment:
Q  712 aatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||||||||||| ||||    
T  21454494 aatttagagagagatagacaca-aaaatagattgtgggtcataccattaagtgggttccaccatc 21454557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 35316937 - 35316837
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| |  |   ||| ||||||||||||| ||||| ||||||||| |||| || ||||||||||||||| ||| |||    
T  35316937 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 35316838  T
Q  776 c 776  Q
    |    
T  35316837 c 35316837  T

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Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 380 - 479
Target Start/End: Original strand, 9950313 - 9950412
Alignment:
Q  380 tagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||||||||||  |||||| |||||| ||||||| | |||||||||| ||| ||||||||| ||| ||| ||  || ||| |||||| ||||||||||    
T  9950313 tagaaatatacgtactaaaagtcgtgcagtcaacttttaaaaagttaaaatattatgttttccaatgcaaagttcctcttttcgggttctttaacatgtg 9950412  T

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Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 489 - 587
Target Start/End: Complemental strand, 23259633 - 23259536
Alignment:
Q  489 tcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||||||||||   ||||| ||||||| | |||| |||  ||||| ||| |||||||||| ||||| |||||||||||||||||||| |||||| ||||    
T  23259633 tcttcatttatacgtttcttcatttcttcaattttgagggataaagacatataaaatcttaaaaaa-agtaaaatataattaatgatggtgggatccac 23259536  T

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Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 669 - 723
Target Start/End: Original strand, 30721565 - 30721619
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagaga 723  Q
    |||||| ||||| ||||||||||||||||||||  || |||||||||||||||||    
T  30721565 gggttaagatccgctccatttgataaaataaatagaagtacacaatttggagaga 30721619  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 668 - 776
Target Start/End: Complemental strand, 2063473 - 2063365
Alignment:
Q  668 tgggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatag-tgggtcataccactaagtggg 766  Q
    ||||||| |||||||| ||||||| ||||||||| | | |   ||||||||||||||||| ||||| ||||||||| | | |||| |||||| |||||||    
T  2063473 tgggttaagatcctcttcatttgacaaaataaat-agagtttgcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtggg 2063375  T
Q  767 ttccatcatc 776  Q
    ||||| ||||    
T  2063374 ttccaccatc 2063365  T

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Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 427
Target Start/End: Complemental strand, 25626416 - 25626319
Alignment:
Q  330 tggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaa 427  Q
    ||||||||| ||| |||||| |||||  | |||||||||  |||| ||  ||||||||||||| | ||||| ||| || |||||||||||||||||||    
T  25626416 tggcaaatgctaacttgtgccctcaataacacatgttaaggaacttattatagaaatatacgtatcaaaagtcgtacattcaacttcttaaaagttaa 25626319  T

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Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 719 - 776
Target Start/End: Complemental strand, 28564961 - 28564904
Alignment:
Q  719 agagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||| ||||    
T  28564961 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 28564904  T

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Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 710 - 755
Target Start/End: Original strand, 34512022 - 34512067
Alignment:
Q  710 acaatttggagagagataaacacataaaatagatagtgggtcatac 755  Q
    |||||||||||| ||||| |||||||||||||||||||||| ||||    
T  34512022 acaatttggagaaagatagacacataaaatagatagtgggttatac 34512067  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 566
Target Start/End: Original strand, 2061296 - 2061382
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatata 566  Q
    |||||||| |||| |||||||   | |||| |||||| ||||||||||| ||||| || ||||||||||| ||||| |||||||||||    
T  2061296 gttaagatcctctccatttattagtatctcaatttcttccatttggagagataaagacgcataaaatcttgaaaaa-agtaaaatata 2061382  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 764
Target Start/End: Original strand, 31618725 - 31618818
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtg 764  Q
    |||||| ||||||||||||||||||||  ||||| |  || |||||||||||| ||||| | | ||||||||||||||| |||||| || ||||||    
T  31618725 gggttaggatcctctccatttgataaag-aaatggag-tatacaatttggagaaagatagatatataaaatagatagtgagtcatatcattaagtg 31618818  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 770
Target Start/End: Complemental strand, 36929793 - 36929734
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttcc 770  Q
    ||||||||||||||||| ||||||||||||| ||||| ||| ||||| ||| ||| ||||    
T  36929793 caatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattcc 36929734  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 676 - 742
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaataga 742  Q
    ||||||||| |||||| ||||||||||||  ||  ||||||| ||||||||| ||||||||||||||    
T  22061433 gatcctctcaatttgacaaaataaatgaag-tatgcaatttgaagagagatagacacataaaataga 22061498  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 551 - 608
Target Start/End: Original strand, 30217480 - 30217538
Alignment:
Q  551 aaaagagtaaaatataattaatgattgtgggacccaccatctatttt-tgtgtctatct 608  Q
    |||| ||||||| |||||||||||| ||||||| ||| ||||||||| |||||||||||    
T  30217480 aaaaaagtaaaaaataattaatgatagtgggactcactatctattttatgtgtctatct 30217538  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 556 - 608
Target Start/End: Complemental strand, 3354843 - 3354790
Alignment:
Q  556 agtaaaatataattaatgattgtgggacccaccatcta-tttttgtgtctatct 608  Q
    ||||||| |||||||||||| |||||||||||||  || |||||||||||||||    
T  3354843 agtaaaaaataattaatgatggtgggacccaccacttattttttgtgtctatct 3354790  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 15722311 - 15722246
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||| ||||||||||| ||||||||||||||   || ||||| ||| ||||||||| ||||    
T  15722311 caatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatc 15722246  T

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Target: chr7 (Bit Score: 65; Significance: 5e-28; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 21151071 - 21151178
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| |||||||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  21151071 gttaggattctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 21151169  T
Q  579 gggacccac 587  Q
    |||||||||    
T  21151170 gggacccac 21151178  T

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Target: chr7; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 482 - 584
Target Start/End: Original strand, 4888389 - 4888490
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtggg 581  Q
    ||||| |||||||||||||| |||||| |||||| ||||||||||| ||||| |||||||||||||| ||||| | |||||||||||||||||| |||||    
T  4888389 aagatcctcttcatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttaaaaaaca-taaaatataattaatgatggtggg 4888487  T
Q  582 acc 584  Q
    |||    
T  4888488 acc 4888490  T

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Target: chr7; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 7362501 - 7362593
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggaccca 586  Q
    ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| |||| |||||    
T  7362501 catttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggtggaaccca 7362593  T

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Target: chr7; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 487 - 587
Target Start/End: Complemental strand, 9559202 - 9559103
Alignment:
Q  487 tctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggaccca 586  Q
    ||||| ||||||| | |||||| |||||| ||||||||||| ||||| |||||||||||||| ||||| | |||||||||||||||||| ||||||||||    
T  9559202 tctctccatttatatgtttctcgatttcttccatttggagagataaagacacataaaatcttgaaaaa-aataaaatataattaatgatggtgggaccca 9559104  T

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Target: chr7; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 331 - 479
Target Start/End: Original strand, 32786785 - 32786933
Alignment:
Q  331 ggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaact 430  Q
    |||||||| ||| |||||| ||||| |  |||||||||  |||||||  || |||||||||| | ||||| |||||| |||||||||||||||||||| |    
T  32786785 ggcaaatgctaacttgtgccctcaagggcacatgttaaggaactcattatataaatatacgtatcaaaagtcgtgcattcaacttcttaaaagttaaaat 32786884  T
Q  431 atcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    || ||||||||| ||  ||| ||| || ||| |||||||||||||||||    
T  32786885 attatgttttccaatacaaagttgctcttttcgggttccttaacatgtg 32786933  T

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Target: chr7; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 479 - 585
Target Start/End: Original strand, 12139247 - 12139350
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| |||||  ||||||||||||| ||||| |||||||||||||||||||| ||    
T  12139247 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaa--cacataaaatcttaaaaaa-agtaaaatataattaatgatggt 12139343  T
Q  579 gggaccc 585  Q
    |||||||    
T  12139344 gggaccc 12139350  T

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Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 493 - 583
Target Start/End: Original strand, 16366451 - 16366540
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggac 583  Q
    ||||||||| ||||||||||||| | ||||||||| ||||| |||| ||||||||| ||||| |||||||||||||||||||| |||||||    
T  16366451 catttatgtgtttctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaa-agtaaaatataattaatgatggtgggac 16366540  T

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Target: chr7; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 479 - 584
Target Start/End: Original strand, 29630967 - 29631071
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| |||| |||| ||||||||||||||||||  |||||||||| ||||| ||||||||||| ||| |||| ||||||  |||||||||||| ||    
T  29630967 gttaagatcctctccattcatgtctttctccatttctttcatttggagatataaagacacataaaat-tttgaaaaaagtaaagaataattaatgatagt 29631065  T
Q  579 gggacc 584  Q
    ||||||    
T  29631066 gggacc 29631071  T

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Target: chr7; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 494 - 575
Target Start/End: Complemental strand, 45260568 - 45260488
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    |||||||| ||||||||||||| | ||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  45260568 atttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc-ttaaaaaaagtaaaatataattaatgat 45260488  T

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Target: chr7; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 477 - 586
Target Start/End: Complemental strand, 47226231 - 47226124
Alignment:
Q  477 gtgttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgatt 576  Q
    |||||| ||| |||| ||||||||| |||||| |||||| | ||||||||| ||||| ||||||||||||||  |||| ||||||||||||||||||||     
T  47226231 gtgttaggatcctctccatttatgtgtttctctatttcttcaatttggagagataaa-acacataaaatcttggaaaa-agtaaaatataattaatgatg 47226134  T
Q  577 gtgggaccca 586  Q
    ||||||||||    
T  47226133 gtgggaccca 47226124  T

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Target: chr7; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 4888579 - 4888479
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||| |||||||||| | ||   ||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||| ||| |||    
T  4888579 gatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccat 4888480  T
Q  776 c 776  Q
    |    
T  4888479 c 4888479  T

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Target: chr7; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 26081099 - 26080991
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttcct 470  Q
    |||||||  ||||||||||| | ||||||   ||||  |||||||||||||||||||| ||| ||||||| | ||| |||||||||| ||||||||||||    
T  26081099 aactcattatagaaatatacatattaaaaattgtgccgtcaacttcttaaaagttaaaatattatgttttacaatgcaaaattgttctttttgggttcct 26081000  T
Q  471 taacatgtg 479  Q
    |||||||||    
T  26080999 taacatgtg 26080991  T

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Target: chr7; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 26104886 - 26104778
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttcct 470  Q
    |||||||  ||||||||||| | ||||||   ||||  |||||||||||||||||||| ||| ||||||| | ||| |||||||||| ||||||||||||    
T  26104886 aactcattatagaaatatacatattaaaaattgtgccgtcaacttcttaaaagttaaaatattatgttttacaatgcaaaattgttctttttgggttcct 26104787  T
Q  471 taacatgtg 479  Q
    |||||||||    
T  26104786 taacatgtg 26104778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 488 - 587
Target Start/End: Original strand, 33450434 - 33450532
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| | ||||| ||||| ||| |||| | ||||| ||||||||||||  ||||||||||    
T  33450434 ctcttcatttatgtccttctccatttctaccatttggagagatataaacacacaaaat-tttgaaaaaaataaaaaataattaatgatgatgggacccac 33450532  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 705 - 763
Target Start/End: Complemental strand, 29844374 - 29844316
Alignment:
Q  705 aatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagt 763  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  29844374 aatacacaatttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

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Target: chr7; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 488 - 575
Target Start/End: Complemental strand, 34986092 - 34986007
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    |||| ||||||||||||||||||||||||||||||||||| ||  ||| ||||||||| || ||||| | ||||| ||||||||||||    
T  34986092 ctctccatttatgtctttctccatttctaccatttggagagat--atagacataaaattttgaaaaaaaataaaaaataattaatgat 34986007  T

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Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 488 - 583
Target Start/End: Original strand, 18198184 - 18198278
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggac 583  Q
    |||| ||||||||| ||||||||||||| | ||||| ||| |||||  ||||||||||||| ||||| | |||||||||||||||||| |||||||    
T  18198184 ctctccatttatgtgtttctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaa-aataaaatataattaatgatggtgggac 18198278  T

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Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 676 - 745
Target Start/End: Original strand, 5463867 - 5463935
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatag 745  Q
    |||||||||||||||||| ||||||| | | || |||||||||||||| |||||||||||||||||||||    
T  5463867 gatcctctccatttgatataataaat-atagtatacaatttggagagatataaacacataaaatagatag 5463935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 680 - 776
Target Start/End: Complemental strand, 7362676 - 7362580
Alignment:
Q  680 ctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    |||||||||||| |||||||||| |  |   ||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||| ||||||||| ||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatc 7362580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 676 - 776
Target Start/End: Original strand, 9559017 - 9559117
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| | ||   ||| ||||||||||||| | ||| ||||||||| ||||||| ||||||||||||||| ||| |||    
T  9559017 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 9559116  T
Q  776 c 776  Q
    |    
T  9559117 c 9559117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 25084884 - 25084777
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||| |   ||||| ||| ||||| ||||||||||| || ||||| | |||||||||||||||||| ||    
T  25084884 gttatgatcctctccatttatgtgtttctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaa-taaaatataattaatgatggt 25084786  T
Q  579 gggacccac 587  Q
    |||||||||    
T  25084785 gggacccac 25084777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 669 - 776
Target Start/End: Complemental strand, 33450626 - 33450518
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataa-aatagatagtgggtcataccactaagtgggt 767  Q
    |||||| ||||||||||||||| ||||||||||  |  |   ||||||||||||||||| ||||| || ||||||| |||||||  ||||||||||||||    
T  33450626 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 33450527  T
Q  768 tccatcatc 776  Q
     ||||||||    
T  33450526 cccatcatc 33450518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 712 - 776
Target Start/End: Original strand, 39855812 - 39855876
Alignment:
Q  712 aatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    |||||||||||||||| |||||||||| |||| || |||| ||||||||||||||| ||||||||    
T  39855812 aatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtcccatcatc 39855876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 669 - 737
Target Start/End: Complemental strand, 47270668 - 47270600
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaa 737  Q
    |||||| ||||||||| ||||||||||||||||| || |||||||||| |||| ||||| |||||||||    
T  47270668 gggttaggatcctctctatttgataaaataaatggaattacacaatttagagatagatagacacataaa 47270600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 380 - 476
Target Start/End: Complemental strand, 47991060 - 47990964
Alignment:
Q  380 tagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacat 476  Q
    |||| |||||||| | ||||| |||||| | |||| ||||||||||||| ||||||||||||| ||| ||| ||  ||||||| |||||||||||||    
T  47991060 tagatatatacgtatcaaaagccgtgcagtgaactccttaaaagttaaattatcatgttttccaatgcaaagttactcattttaggttccttaacat 47990964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 394 - 477
Target Start/End: Original strand, 31054231 - 31054314
Alignment:
Q  394 ttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatg 477  Q
    ||||||| ||| || |||||||||||||||||||| ||| || || ||| ||||||| |||||| ||||| |||||||||||||    
T  31054231 ttaaaagtcgtacattcaacttcttaaaagttaaaatattatattctccaatgtaaagttgttctttttgtgttccttaacatg 31054314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 380 - 479
Target Start/End: Original strand, 32546751 - 32546849
Alignment:
Q  380 tagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    ||||||||||||  | ||||| || |||||||||||||||||||||||| |||||| ||||   |||  |||||| |||||||||||||||||| |||||    
T  32546751 tagaaatatacgcatcaaaagtcgggcaatcaacttcttaaaagttaaattatcatattttttaatg-caaattgctcattttgggttccttaatatgtg 32546849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 587
Target Start/End: Complemental strand, 47500430 - 47500332
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||| |||||||||| ||||||||||||||||||| |||| ||| | ||||| ||||| ||| |||| | ||||| ||||||||||||  ||||||||||    
T  47500430 ctctccatttatgtccttctccatttctaccatttagagagatatagacacacaaaat-tttgaaaaaaataaaaaataattaatgatgatgggacccac 47500332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 776
Target Start/End: Original strand, 25084730 - 25084791
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||| ||||    
T  25084730 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 25084791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 763
Target Start/End: Complemental strand, 989206 - 989154
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagt 763  Q
    ||||||||||||||||| ||||| |||||| |||||||||| |||||||||||    
T  989206 caatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagt 989154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 360 - 478
Target Start/End: Original strand, 28337228 - 28337346
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcat 459  Q
    |||||||||  |||||||  |||||||||| || | ||||  ||||||||||||||||||||||||||| ||  || |||| | ||| ||| ||| || |    
T  28337228 acatgttaagaaactcattatagaaatatatgtataaaaaatcgtgcaatcaacttcttaaaagttaaaatactatatttttcaatgcaaagttgctctt 28337327  T
Q  460 tttgggttccttaacatgt 478  Q
    ||| | |||||||||||||    
T  28337328 tttagattccttaacatgt 28337346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 479 - 575
Target Start/End: Original strand, 44647884 - 44647976
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||   || ||||| |||||||||||||| |||||  |||||||||||||||||||    
T  44647884 gttatgatcctctccatttatgtgtttctccatttcttcaattt---gagataaagacacataaaatcttgaaaaa-tgtaaaatataattaatgat 44647976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 493 - 583
Target Start/End: Original strand, 32915892 - 32915978
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggac 583  Q
    |||||||||  |||||||||||| ||||||||||| ||||| ||||| ||||  ||||||||    ||||||||||| ||||| |||||||    
T  32915892 catttatgttcttctccatttcttccatttggagagataaagacacaaaaaagttttaaaaa----aaaatataattcatgatggtgggac 32915978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 715 - 776
Target Start/End: Original strand, 45260429 - 45260490
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||||| ||||||||| |||| || ||||||||||||| | ||||||||    
T  45260429 ttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatc 45260490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 712 - 776
Target Start/End: Original strand, 47500281 - 47500346
Alignment:
Q  712 aatttggagagagataaacacataa-aatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    |||||||||||||||| ||||| || ||||||| |||||||  |||||||||||||| ||||||||    
T  47500281 aatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatc 47500346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 595 - 635
Target Start/End: Original strand, 29631100 - 29631140
Alignment:
Q  595 ttttgtgtctatcttttcaaattgtaaactccatttatttt 635  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  29631100 ttttgtgtctatctcttcaaattgcaaactccatttatttt 29631140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 362 - 462
Target Start/End: Complemental strand, 47390651 - 47390551
Alignment:
Q  362 atgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattt 461  Q
    |||||||| |||||||  |  |||||||||| ||||||| ||| || |||||||||| |||||| || ||| ||||||| | ||  ||||||||||||||    
T  47390651 atgttaaaaaactcattatttaaatatacgtattaaaagtcgtacattcaacttcttgaaagttcaaatattatgtttttcaatacaaaattgttcattt 47390552  T
Q  462 t 462  Q
    |    
T  47390551 t 47390551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 766
Target Start/End: Complemental strand, 12139400 - 12139349
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtggg 766  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||||| ||||||||    
T  12139400 ttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggg 12139349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 34985943 - 34986009
Alignment:
Q  711 caatttggagagagataaacacataa-aatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||||||| ||||| || ||||||| |||||||| |||||||| || || ||||||||    
T  34985943 caatttggagagagatagacacaaaagaatagatggtgggtcaaaccactaaatgagtcccatcatc 34986009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 411 - 479
Target Start/End: Original strand, 31399353 - 31399419
Alignment:
Q  411 aacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    ||||| ||||||||||||||||||| ||||   || ||||||||||  |||| ||||||||||||||||    
T  31399353 aactttttaaaagttaaactatcatattttttaatataaaattgtt--tttttggttccttaacatgtg 31399419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 5e-28; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 11775711 - 11775819
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||  ||    
T  11775711 gttaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataattaatgacggt 11775810  T
Q  579 gggacccac 587  Q
    |||||||||    
T  11775811 gggacccac 11775819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 360 - 479
Target Start/End: Complemental strand, 554425 - 554306
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcat 459  Q
    |||||||||  |||||||  |||||||||| || ||||||| |||||| ||||||| |||||||||||| |||||| |||||| ||| ||||||||||||    
T  554425 acatgttaaggaactcattatagaaatatatgtattaaaagccgtgcagtcaactttttaaaagttaaattatcatattttccaatgcaaaattgttcat 554326  T
Q  460 tttgggttccttaacatgtg 479  Q
    ||||| || |||||||||||    
T  554325 tttggatttcttaacatgtg 554306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 4895891 - 4895784
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||||||||||| | ||||||||||||| | ||||||||| ||||| ||||||||||| ||| |||| |||||||||||||||||||| ||    
T  4895891 gttaggatcctcttcatttatatgtttctccatttcttcaatttggagagataaagacacataaaat-tttgaaaaaagtaaaatataattaatgatggt 4895793  T
Q  579 gggacccac 587  Q
    |||||||||    
T  4895792 gggacccac 4895784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 35660765 - 35660658
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||||||| ||||  |||||||| ||||||| ||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  35660765 gttaagatcctctctatttatgtgtttctccgtttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 35660667  T
Q  579 gggacccac 587  Q
    |||||||||    
T  35660666 gggacccac 35660658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 480 - 580
Target Start/End: Original strand, 39902335 - 39902434
Alignment:
Q  480 ttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtg 579  Q
    ||||||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||| |||    
T  39902335 ttaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc-ttaaaaaaagtaaaatataattaatgatggtg 39902433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 479 - 598
Target Start/End: Complemental strand, 1475794 - 1475676
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||||||||||||| ||| | ||||||| | ||||||||  ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  1475794 gttaggatcctcttcatttatgtgttttttcatttcttcaatttggagtgataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 1475696  T
Q  579 gggacccaccatctattttt 598  Q
    ||||||||| | ||||||||    
T  1475695 gggacccactagctattttt 1475676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 360 - 476
Target Start/End: Original strand, 10523679 - 10523795
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcat 459  Q
    |||||||||  |||||||  ||||||||||||| | ||||| |||||| |||| ||||||||||||||||||| |||||| || || ||||||||||| |    
T  10523679 acatgttaaggaactcattatagaaatatacgtatcaaaagtcgtgcattcaatttcttaaaagttaaactattatgtttaccaatataaaattgttctt 10523778  T
Q  460 tttgggttccttaacat 476  Q
    ||||  |||||||||||    
T  10523779 tttgaattccttaacat 10523795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 479 - 586
Target Start/End: Original strand, 13032038 - 13032143
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| ||||||||||||||  |||| | |||||||||||||||||| ||    
T  13032038 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatctt--aaaaaaataaaatataattaatgatggt 13032135  T
Q  579 gggaccca 586  Q
    ||||||||    
T  13032136 gggaccca 13032143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 32129773 - 32129666
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||| | ||||||||||||| | ||||||||| ||||| ||||||||||| ||| |||| |||||||||||||||||||| ||    
T  32129773 gttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat-tttgaaaaaagtaaaatataattaatgatggt 32129675  T
Q  579 gggacccac 587  Q
    |||||||||    
T  32129674 gggacccac 32129666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 488 - 587
Target Start/End: Original strand, 4592729 - 4592826
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||| ||||||||| ||||||||||||| | ||||||||| |||| |||||||||||| || ||||| |||||||||||||||||||| |||||||||||    
T  4592729 ctctccatttatgtgtttctccatttcttcaatttggagagataa-tacacataaaatattgaaaaa-agtaaaatataattaatgatggtgggacccac 4592826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 482 - 587
Target Start/End: Complemental strand, 18625574 - 18625470
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtggg 581  Q
    ||||| |||| ||||||||| ||| || ||||||  |||||||||| ||||| |||||||||||||| ||||| | |||||||||||||||||| |||||    
T  18625574 aagatcctctccatttatgtgtttttcaatttctttcatttggagagataaagacacataaaatcttgaaaaa-aataaaatataattaatgatggtggg 18625476  T
Q  582 acccac 587  Q
    ||||||    
T  18625475 acccac 18625470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 37266650 - 37266757
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| |||||| || ||| ||||||||| | ||||||||| ||||| |||||||||||||| ||||| | |||||||||||||||||| ||    
T  37266650 gttaggatcctctccatttacgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-actaaaatataattaatgatggt 37266748  T
Q  579 gggacccac 587  Q
    |||||||||    
T  37266749 gggacccac 37266757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 40753318 - 40753211
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| |||||||||  ||||||||||||   ||||||||| |||||  ||||||||||||| ||||| |||||||||||||||||||| ||    
T  40753318 gttaggatcctctccatttatgtgcttctccatttctttaatttggagagataaaagcacataaaatcttgaaaaa-agtaaaatataattaatgatggt 40753220  T
Q  579 gggacccac 587  Q
    |||||||||    
T  40753219 gggacccac 40753211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 493 - 583
Target Start/End: Complemental strand, 8441113 - 8441024
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggac 583  Q
    ||||||||| ||||||| ||||  | ||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||    
T  8441113 catttatgtgtttctccgtttcatcaatttggagagataaatacacatacaatc-ttaaaaaaagtaaaatataattaatgatggtgggac 8441024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 326 - 479
Target Start/End: Original strand, 26104999 - 26105152
Alignment:
Q  326 tttttggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagtt 425  Q
    ||||| ||||||| ||| |||||| ||||| || |||||||||  |||| ||   |||||||||||  | ||||| |||||| |||| ||||||||||||    
T  26104999 tttttagcaaatgctaacttgtgcactcaatgacacatgttaaggaacttattaaagaaatatacgcataaaaagtcgtgcattcaaattcttaaaagtt 26105098  T
Q  426 aaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
     |  ||| ||||||||||||| ||| ||  |||||||||||| |||||||||||    
T  26105099 gatatattatgttttccgatgcaaagtttctcattttgggttgcttaacatgtg 26105152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 14349723 - 14349829
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    ||||||||  ||| ||||||||| |||||||||||||   ||||||| | ||||| ||||||||| |||| ||||| |||||||||||||||||||| ||    
T  14349723 gttaagatcttctccatttatgtgtttctccatttctttaatttggaaagataaagacacataaa-tcttgaaaaa-agtaaaatataattaatgatggt 14349820  T
Q  579 gggacccac 587  Q
    |||||||||    
T  14349821 gggacccac 14349829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 37266843 - 37266743
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| |  |   ||| ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||| |||    
T  37266843 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 37266744  T
Q  776 c 776  Q
    |    
T  37266743 c 37266743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 678 - 776
Target Start/End: Complemental strand, 39902525 - 39902427
Alignment:
Q  678 tcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    |||||||||||||| |||||||||| |  |  |||| |||||||||||||||||||  |||||||| ||||||| ||||||||| ||| ||||| ||||    
T  39902525 tcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattccaccatc 39902427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 676 - 776
Target Start/End: Original strand, 18625384 - 18625484
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| | ||   ||| ||||||||||| | ||||| ||||||||| ||||||| ||||||||||||||| ||| |||    
T  18625384 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 18625483  T
Q  776 c 776  Q
    |    
T  18625484 c 18625484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 29341106 - 29341007
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    ||||||||||||||| || |||||||| |  ||  ||||||||||||||||| ||||| ||||||||||||||||| ||| | ||||||||| ||| |||    
T  29341106 gatcctctccatttggtataataaatggag-tatgcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccat 29341008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 676 - 776
Target Start/End: Original strand, 35660572 - 35660672
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| |  |   ||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||| |||    
T  35660572 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 35660671  T
Q  776 c 776  Q
    |    
T  35660672 c 35660672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 676 - 767
Target Start/End: Complemental strand, 11775905 - 11775814
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggt 767  Q
    ||||||||||||||| ||||||||||| |  |   ||| ||||||||||||| ||||| ||||||||| |||| || |||||||||||||||    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggt 11775814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 380 - 479
Target Start/End: Original strand, 29557516 - 29557615
Alignment:
Q  380 tagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||||||| || | ||||| |||| | | || || |||||||||||| ||||||||||||| ||  ||| ||| ||||||||||||||||||||||||    
T  29557516 tagaaatatatgtatcaaaagtcgtgtagttaaatttttaaaagttaaattatcatgttttccaatacaaagttgctcattttgggttccttaacatgtg 29557615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 388 - 454
Target Start/End: Complemental strand, 7738408 - 7738342
Alignment:
Q  388 tacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattg 454  Q
    ||||| ||||||| | | || ||||||| |||||||||||||||||||||||||| |||||||||||    
T  7738408 tacgtattaaaagtcttacattcaacttattaaaagttaaactatcatgttttccaatgtaaaattg 7738342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 479 - 576
Target Start/End: Complemental strand, 3057310 - 3057214
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgatt 576  Q
    ||||||||  ||| || |||||||| ||||||||||| | ||||| ||| ||||| |||| |||| | |||||||| |||||||||||||||||||||    
T  3057310 gttaagatcttctccaattatgtctctctccatttcttctatttgaagagataaagacacttaaattttttaaaaa-agtaaaatataattaatgatt 3057214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 776
Target Start/End: Original strand, 4895737 - 4895798
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||| ||||    
T  4895737 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 776
Target Start/End: Original strand, 32129580 - 32129680
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| |  |  | || ||||||||||||| ||||  ||||||||| ||||||| ||||||||||||||| ||| |||    
T  32129580 gatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccat 32129679  T
Q  776 c 776  Q
    |    
T  32129680 c 32129680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 423
Target Start/End: Complemental strand, 8222192 - 8222097
Alignment:
Q  328 tttggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaag 423  Q
    ||||| ||||||||| ||||||||| || || |||||||||  |||||||  ||||||||||||| ||||||  ||||||  ||| ||||||||||    
T  8222192 tttggtaaatgttaacttgtgctcttaatgacacatgttaatgaactcattatagaaatatacgtattaaaaaccgtgcatccaatttcttaaaag 8222097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 711 - 745
Target Start/End: Complemental strand, 31653112 - 31653078
Alignment:
Q  711 caatttggagagagataaacacataaaatagatag 745  Q
    |||||||||||||||||||||||||||||||||||    
T  31653112 caatttggagagagataaacacataaaatagatag 31653078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 715 - 776
Target Start/End: Complemental strand, 14349876 - 14349815
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||| | ||||| ||||||||| ||||||| ||||||||||||||| ||| ||||    
T  14349876 ttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 14349815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 479 - 544
Target Start/End: Original strand, 43405555 - 43405620
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaa 544  Q
    ||||||||||| ||||||||||||||||||||||| | ||||||| | | ||||| | ||||||||    
T  43405555 gttaagattcttttcatttatgtctttctccatttgttccatttgaaaagataaagatacataaaa 43405620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 383 - 467
Target Start/End: Complemental strand, 16627373 - 16627289
Alignment:
Q  383 aaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggtt 467  Q
    ||||||| || ||||||| |||||| ||||||| |||||||||||| ||  ||||||||  ||| ||||||| ||||||| ||||    
T  16627373 aaatatatgtattaaaagtcgtgcattcaactttttaaaagttaaaatactatgttttctaatgcaaaattgatcattttaggtt 16627289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 43309220 - 43309120
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    ||||||||  ||||||||||||||||| |  |   ||| ||||||||||||| ||| | |||||||||||||| || ||||| ||| ||||||||| |||    
T  43309220 gatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccat 43309121  T
Q  776 c 776  Q
    |    
T  43309120 c 43309120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 668 - 702
Target Start/End: Complemental strand, 21213988 - 21213954
Alignment:
Q  668 tgggttatgatcctctccatttgataaaataaatg 702  Q
    ||||||| |||||||||||||||||||||||||||    
T  21213988 tgggttaggatcctctccatttgataaaataaatg 21213954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 503 - 545
Target Start/End: Original strand, 23253736 - 23253778
Alignment:
Q  503 tttctccatttctaccatttggagaaataaatacacataaaat 545  Q
    ||||||||||||||||||||||||| ||| | |||||||||||    
T  23253736 tttctccatttctaccatttggagagatagagacacataaaat 23253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 541 - 583
Target Start/End: Complemental strand, 28142870 - 28142828
Alignment:
Q  541 aaaatctttaaaaagagtaaaatataattaatgattgtgggac 583  Q
    |||||||| ||||| |||||||||||||||||||| |||||||    
T  28142870 aaaatcttgaaaaaaagtaaaatataattaatgatggtgggac 28142828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 518 - 584
Target Start/End: Original strand, 32793332 - 32793397
Alignment:
Q  518 catttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacc 584  Q
    |||||| ||| ||||| ||  |||||||||| ||||| |||||||||||||| ||||||||||||||    
T  32793332 catttgaagagataaagacgaataaaatcttgaaaaa-agtaaaatataattgatgattgtgggacc 32793397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 33368552 - 33368510
Alignment:
Q  473 acatgtgttaagattctcttcatttatgtctttctccatttct 515  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||    
T  33368552 acatgagttaaaattctctccatttatgtctttctccatttct 33368510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 41144718 - 41144648
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaact 430  Q
    |||||||||  |||||||  ||||||||||| | | ||||| |||||| ||||||| ||||||||||||||    
T  41144718 acatgttaaggaactcattatagaaatatacatatcaaaagtcgtgcattcaactttttaaaagttaaact 41144648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 764
Target Start/End: Original strand, 3057152 - 3057205
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtg 764  Q
    ||||||||| ||||||||||||| ||||||||| |||| || ||||| ||||||    
T  3057152 caatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtg 3057205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 494 - 539
Target Start/End: Original strand, 10242766 - 10242811
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacaca 539  Q
    |||||||| | ||||||||||||||||||||||| ||||| |||||    
T  10242766 atttatgtttctctccatttctaccatttggagagataaagacaca 10242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 715 - 776
Target Start/End: Complemental strand, 34827265 - 34827204
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||| | ||||||||| |||| || ||||||||||||||| ||| ||||    
T  34827265 ttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatc 34827204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 402 - 479
Target Start/End: Complemental strand, 40044896 - 40044819
Alignment:
Q  402 cgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||| |||||||||||||| ||||| |   ||||||||| |   ||||||| || |||||||||||||||||||||    
T  40044896 cgtgcattcaacttcttaaaaattaaaattgtatgttttccaacacaaaattgctctttttgggttccttaacatgtg 40044819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 715 - 776
Target Start/End: Original strand, 40753164 - 40753225
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||| ||||| ||||| |||||| || ||||||| ||||||||||||||| ||| ||||    
T  40753164 ttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatc 40753225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 505 - 598
Target Start/End: Original strand, 13641 - 13733
Alignment:
Q  505 tctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccaccatctattttt 598  Q
    ||||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  13641 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggtgggacccaccatctattttt 13733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 2e-24; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 670 - 776
Target Start/End: Complemental strand, 42761831 - 42761725
Alignment:
Q  670 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttc 769  Q
    ||||| |||||||| || || |||||||||||| || ||| ||||||| ||||||||| |||||||||||||||||||| || ||||||| |||||||||    
T  42761831 ggttaggatcctcttcacttaataaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttc 42761732  T
Q  770 catcatc 776  Q
    |||||||    
T  42761731 catcatc 42761725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 30426825 - 30426718
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||| ||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  30426825 gttaggatcctctccatttatgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 30426727  T
Q  579 gggacccac 587  Q
    |||||||||    
T  30426726 gggacccac 30426718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 36991275 - 36991382
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||||||||||||| ||||||||||||| | ||||||||| ||||| |||| ||||||||| ||||| ||| |||||||||||||||| ||    
T  36991275 gttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaa-agtcaaatataattaatgatggt 36991373  T
Q  579 gggacccac 587  Q
    |||||||||    
T  36991374 gggacccac 36991382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 669 - 765
Target Start/End: Complemental strand, 21360398 - 21360299
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaa---atacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgg 765  Q
    |||||| |||||||||||||||||||||||||||||    ||||| ||||||||||||||||||||||||| ||||||| | | |||||||| |||||||    
T  21360398 gggttaggatcctctccatttgataaaataaatgaagtacatacataatttggagagagataaacacataatatagataatagatcataccattaagtgg 21360299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 482 - 587
Target Start/End: Original strand, 28069641 - 28069745
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtggg 581  Q
    ||||| |||| ||||||||| ||| || |||||| ||||||||||| ||||| |||||||||||||| ||||| | |||||||||||||||||| |||||    
T  28069641 aagatcctctccatttatgtgtttttcaatttcttccatttggagagataaagacacataaaatcttgaaaaa-aataaaatataattaatgatggtggg 28069739  T
Q  582 acccac 587  Q
    ||||||    
T  28069740 acccac 28069745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 18689568 - 18689503
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||||||    
T  18689568 caatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatc 18689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 479 - 580
Target Start/End: Original strand, 41511181 - 41511281
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||| ||||||||| | ||||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||| ||    
T  41511181 gttaggatcctctccatttatgtgtttttccatttcttcaatttggagagataaaaacacataaaatcttgaaaaa-agtaaaatataattaatgatggt 41511279  T
Q  579 gg 580  Q
    ||    
T  41511280 gg 41511281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 479 - 586
Target Start/End: Complemental strand, 10652774 - 10652667
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaa-tataattaatgattg 577  Q
    |||||||| |||| ||||||||| ||||| ||||||| | ||||||||| ||||| ||||||||||| || ||||| ||||||| ||||||||||||| |    
T  10652774 gttaagatcctctccatttatgtgtttcttcatttcttcaatttggagagataaa-acacataaaattttgaaaaaaagtaaaaatataattaatgatgg 10652676  T
Q  578 tgggaccca 586  Q
    |||||||||    
T  10652675 tgggaccca 10652667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 28319058 - 28318951
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| |||| ||| |||||| || ||||||||||||| | ||||||||| | ||| ||||||||||| |||||||| |||||||||||||||||||| ||    
T  28319058 gttaggattttctccatttacgtgtttctccatttcttcaatttggagagacaaagacacataaaat-tttaaaaaaagtaaaatataattaatgatggt 28318960  T
Q  579 gggacccac 587  Q
     ||||||||    
T  28318959 tggacccac 28318951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 488 - 583
Target Start/End: Complemental strand, 10672659 - 10672565
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggac 583  Q
    |||||||||||||| ||||| ||||| | | ||||||||| ||||| | ||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  10672659 ctcttcatttatgtgtttcttcatttattcaatttggagagataaaaatacataaaat-tttaaaaagggtaaaatataattaatgatggtgggac 10672565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 479 - 575
Target Start/End: Complemental strand, 27490162 - 27490067
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    ||||||||  ||| |||||||||||||||| |||||| ||||||| ||| | ||| | |||||||||||| ||||| ||||||||||||||||||||    
T  27490162 gttaagatcttctccatttatgtctttctcaatttcttccatttgaagagacaaaaatacataaaatcttgaaaaa-agtaaaatataattaatgat 27490067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 479 - 573
Target Start/End: Complemental strand, 37966598 - 37966505
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatg 573  Q
    ||||||||  |||| ||||||||||||||||||||||   ||||||||| ||||| | ||||||||  |||||||| ||||||||||||||||||    
T  37966598 gttaagatcttcttaatttatgtctttctccatttcttttatttggagagataaagatacataaaa-atttaaaaaaagtaaaatataattaatg 37966505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 28069831 - 28069731
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| | ||   ||| ||||||||||| | ||||| ||||||||| ||||||| ||||||||||||||| ||| |||    
T  28069831 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 28069732  T
Q  776 c 776  Q
    |    
T  28069731 c 28069731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 571
Target Start/End: Original strand, 8412182 - 8412264
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaa 571  Q
    |||| ||||||||| ||||| ||||| | |||||| |||| ||||||||||||||||| || ||||| ||||||||||||||||    
T  8412182 ctctccatttatgtttttcttcattttttccatttagagagataaatacacataaaatattgaaaaa-agtaaaatataattaa 8412264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 380 - 479
Target Start/End: Original strand, 15067616 - 15067715
Alignment:
Q  380 tagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    |||||||| |||| | ||||| |||||| |||| |||| |||||||||| ||| ||||||||| ||| ||| ||| | ||||| ||||||||||||||||    
T  15067616 tagaaataaacgtatcaaaagtcgtgcagtcaatttctcaaaagttaaattatgatgttttccaatgcaaagttgcttattttaggttccttaacatgtg 15067715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 331 - 480
Target Start/End: Original strand, 6530301 - 6530450
Alignment:
Q  331 ggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaact 430  Q
    |||||||| ||| |||||| ||||| |  |||||||||  |||| ||   ||||||||| |  | ||||| |||||| |||||||||||||||| ||  |    
T  6530301 ggcaaatgctaacttgtgccctcaagggcacatgttaaggaacttattaaagaaatataagcataaaaagtcgtgcattcaacttcttaaaagtcaatat 6530400  T
Q  431 atcatgttttccgatgtaaaattgttcattttgggttccttaacatgtgt 480  Q
    || ||||||||| ||| ||| ||| || ||||||||| ||||||||||||    
T  6530401 attatgttttccaatgcaaagttgctctttttgggttgcttaacatgtgt 6530450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 476
Target Start/End: Original strand, 7774631 - 7774736
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttcct 470  Q
    |||||||  |||||||||| || | ||||| |||||| |||||||||||||  ||||| | | ||||||||| ||||||||||  ||||||| ||||| |    
T  7774631 aactcattatagaaatatatgtatcaaaagtcgtgcattcaacttcttaaacattaaaatgttatgttttccaatgtaaaattactcattttaggttctt 7774730  T
Q  471 taacat 476  Q
    ||||||    
T  7774731 taacat 7774736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 476
Target Start/End: Original strand, 7791278 - 7791383
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttcct 470  Q
    |||||||  |||||||||| || | ||||| |||||| |||||||||||||  ||||| | | ||||||||| ||||||||||  ||||||| ||||| |    
T  7791278 aactcattatagaaatatatgtatcaaaagtcgtgcattcaacttcttaaacattaaaatgttatgttttccaatgtaaaattactcattttaggttctt 7791377  T
Q  471 taacat 476  Q
    ||||||    
T  7791378 taacat 7791383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 476
Target Start/End: Original strand, 7811862 - 7811967
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttcct 470  Q
    |||||||  |||||||||| || | ||||| |||||| |||||||||||||  ||||| | | ||||||||| ||||||||||  ||||||| ||||| |    
T  7811862 aactcattatagaaatatatgtatcaaaagtcgtgcattcaacttcttaaacattaaaatgttatgttttccaatgtaaaattactcattttaggttctt 7811961  T
Q  471 taacat 476  Q
    ||||||    
T  7811962 taacat 7811967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 776
Target Start/End: Original strand, 30426671 - 30426732
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||| ||| ||||    
T  30426671 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 30426732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 598
Target Start/End: Complemental strand, 12177705 - 12177602
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccaccatcta 593  Q
    |||||||| ||||||||||||| | ||||  ||| ||||  |||  ||||||||| ||||| | |||||||||| ||||||| |||||| ||||||||||    
T  12177705 atttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaa-taaaatataactaatgatggtgggatccaccatcta 12177607  T
Q  594 ttttt 598  Q
    |||||    
T  12177606 ttttt 12177602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 598
Target Start/End: Complemental strand, 12422133 - 12422030
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccaccatcta 593  Q
    |||||||| ||||||||||||| | ||||  ||| ||||  |||  ||||||||| ||||| | |||||||||| ||||||| |||||| ||||||||||    
T  12422133 atttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaa-taaaatataactaatgatggtgggatccaccatcta 12422035  T
Q  594 ttttt 598  Q
    |||||    
T  12422034 ttttt 12422030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 669 - 761
Target Start/End: Original strand, 37966400 - 37966491
Alignment:
Q  669 gggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaa 761  Q
    |||||| |||||||||||||||  |||||||||| || |   ||||||| ||||||||||||||| ||||||||| || |||| |||||||||    
T  37966400 gggttaagatcctctccatttggcaaaataaatggaatttg-caatttgaagagagataaacacaaaaaatagattgtaggtcctaccactaa 37966491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 360 - 479
Target Start/End: Complemental strand, 8114441 - 8114322
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcat 459  Q
    |||||||||  |||||||  || ||||||| || ||||||| |||||| |||| || |||||| ||||| |||||||||||   ||| ||||||| ||||    
T  8114441 acatgttaagaaactcattataaaaatatatgtattaaaagtcgtgcagtcaattttttaaaaattaaattatcatgttttttaatgcaaaattgctcat 8114342  T
Q  460 tttgggttccttaacatgtg 479  Q
    |||   ||||||||||||||    
T  8114341 tttaaattccttaacatgtg 8114322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 479 - 545
Target Start/End: Original strand, 5033025 - 5033091
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaat 545  Q
    |||||||| |||| ||||||| | ||||||||||||| | ||||||||| ||||| |||||||||||    
T  5033025 gttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 5033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 494 - 580
Target Start/End: Complemental strand, 40695388 - 40695303
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgg 580  Q
    |||||||| ||| ||||||||| | ||||||||  ||||| | |||||||||||| ||||| |||||||||||| ||||||| ||||    
T  40695388 atttatgtatttatccatttcttcaatttggagggataaagaaacataaaatcttgaaaaa-agtaaaatataactaatgatggtgg 40695303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 715 - 776
Target Start/End: Original strand, 40695249 - 40695310
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||||| ||||||||| || |||| |||||||||||| |||||| ||||    
T  40695249 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatc 40695310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 331 - 479
Target Start/End: Original strand, 31313302 - 31313450
Alignment:
Q  331 ggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaact 430  Q
    |||||||| ||| |||||| ||||| |  |||||||||  || ||||  ||||||||||||| | ||||| | |||| ||||||| ||||||||| |  |    
T  31313302 ggcaaatgctaacttgtgccctcaagggcacatgttaaggaagtcattatagaaatatacgtatcaaaagtcatgcattcaactttttaaaagttgacat 31313401  T
Q  431 atcatgttttccgatgtaaaattgttcattttgggttccttaacatgtg 479  Q
    || ||||||||| ||| ||| ||| || |||| | || |||||||||||    
T  31313402 attatgttttccaatgcaaagttgctctttttagattgcttaacatgtg 31313450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 488 - 575
Target Start/End: Original strand, 45113198 - 45113284
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    |||| ||||||| || |||| ||||| ||||||||||||| ||| | ||||||||||| ||| |||| | ||||| ||||||||||||    
T  45113198 ctctccatttatatccttcttcatttttaccatttggagagatatagacacataaaat-tttgaaaaaaataaaaaataattaatgat 45113284  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 575
Target Start/End: Original strand, 6014123 - 6014208
Alignment:
Q  489 tcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgat 575  Q
    |||||||||||||| ||||  ||||||||||||||||||  || | ||||| ||| | ||| |||| ||||||| ||||||||||||    
T  6014123 tcttcatttatgtccttctttatttctaccatttggagaggtatagacacacaaagt-tttcaaaaaagtaaaacataattaatgat 6014208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 612 - 658
Target Start/End: Original strand, 8412687 - 8412733
Alignment:
Q  612 caaattgtaaactccatttattttgtcaaacgacgaggatctgaacc 658  Q
    ||||||| |||||||||||||||||||||| || |||||||| ||||    
T  8412687 caaattgcaaactccatttattttgtcaaatgaagaggatcttaacc 8412733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 711 - 769
Target Start/End: Complemental strand, 17520459 - 17520401
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttc 769  Q
    ||||||||||||| ||| ||||||||||||||||| | ||| ||| | |||||||||||    
T  17520459 caatttggagagatatagacacataaaatagatagcgagtcctactattaagtgggttc 17520401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 296 - 330
Target Start/End: Original strand, 21636524 - 21636558
Alignment:
Q  296 tataatgtatcaattgatgtgattaaatacttttt 330  Q
    |||||| ||||||||||||||||||||||||||||    
T  21636524 tataatatatcaattgatgtgattaaatacttttt 21636558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 8867206 - 8867287
Alignment:
Q  360 acatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttc 441  Q
    |||||||||| |||||||  ||||||||||||  | |||||  ||||| |||||||||||||| ||||| | | ||||||||    
T  8867206 acatgttaaagaactcattatagaaatatacgcatcaaaagttgtgcattcaacttcttaaaaattaaaatgttatgttttc 8867287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 776
Target Start/End: Original strand, 24557179 - 24557244
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||| ||||||| | ||||||||||| || |||||| ||||| |||||| || ||||||||    
T  24557179 caatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatc 24557244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 479 - 544
Target Start/End: Complemental strand, 28584645 - 28584581
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaa 544  Q
    ||||| || |||||||||| ||||||||||||||| | ||||||||||| ||||| ||| ||||||    
T  28584645 gttaaaatcctcttcattt-tgtctttctccatttattccatttggagagataaaaacatataaaa 28584581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 488 - 608
Target Start/End: Complemental strand, 73987 - 73867
Alignment:
Q  488 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||| ||||||||| ||||||||||||| | |||| |||| ||||| |||||||||||||| ||||| | ||||||||||||||||||  ||||||||||    
T  73987 ctctccatttatgtgtttctccatttcttcaatttagagagataaaaacacataaaatcttgaaaaa-aataaaatataattaatgatgatgggacccac 73889  T
Q  588 catctat-ttttgtgtctatct 608  Q
    ||||||| ||||| ||||||||    
T  73888 catctatattttgcgtctatct 73867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 207982 - 208089
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||||||||||| | ||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||||  |    
T  207982 gttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc-ttaaaaaaagtaaaatataattaatgatgat 208080  T
Q  579 gggacccac 587  Q
    |||||||||    
T  208081 gggacccac 208089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 676 - 776
Target Start/End: Complemental strand, 208175 - 208075
Alignment:
Q  676 gatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcat 775  Q
    |||||||||||||||  |||||||||| |  |   ||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| |||||||    
T  208175 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 208076  T
Q  776 c 776  Q
    |    
T  208075 c 208075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 52; Significance: 3e-20; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 493 - 580
Target Start/End: Complemental strand, 22584 - 22498
Alignment:
Q  493 catttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgg 580  Q
    ||||||||||| |||||||||||  ||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  22584 catttatgtctatctccatttcttacatttagagagataaatacacataaaatcttgaaaaa-agtaaaatataattaattattgtgg 22498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 721 - 771
Target Start/End: Original strand, 22450 - 22500
Alignment:
Q  721 agagataaacacataaaatagatagtgggtcataccactaagtgggttcca 771  Q
    ||||||| ||||| |||||||||||||| || |||||||||||| ||||||    
T  22450 agagatagacacaaaaaatagatagtggatcctaccactaagtgagttcca 22500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 58757 - 58692
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||||||    
T  58757 caatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatc 58692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 711 - 776
Target Start/End: Complemental strand, 70868 - 70803
Alignment:
Q  711 caatttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||| ||||||||||| ||||||||||||||   || ||||| ||| ||||||||| ||||    
T  70868 caatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatc 70803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 494 - 587
Target Start/End: Complemental strand, 16538 - 16446
Alignment:
Q  494 atttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgggacccac 587  Q
    |||||||| ||||||||||||| | ||||||||| |||||   |||||||||||| ||||| | ||||||||||||||||||  ||||||||||    
T  16538 atttatgtgtttctccatttcttcaatttggagagataaaattacataaaatcttgaaaaa-aataaaatataattaatgatgatgggacccac 16446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 715 - 776
Target Start/End: Original strand, 16399 - 16460
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||||| |||||| || ||||||| ||||||||||||||| ||||||||    
T  16399 ttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatc 16460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 479 - 587
Target Start/End: Original strand, 7066 - 7173
Alignment:
Q  479 gttaagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgt 578  Q
    |||| ||| |||| ||||||||| ||||| ||||||| | ||||| ||| ||||| ||| |||||||||| ||||| | |||||||||||||||||| ||    
T  7066 gttaggatcctctccatttatgtgtttcttcatttcttcaatttgcagagataaagacatataaaatcttgaaaaaaa-taaaatataattaatgatggt 7164  T
Q  579 gggacccac 587  Q
    || ||||||    
T  7165 ggaacccac 7173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 715 - 776
Target Start/End: Complemental strand, 7220 - 7159
Alignment:
Q  715 ttggagagagataaacacataaaatagatagtgggtcataccactaagtgggttccatcatc 776  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||| | ||||||||||||| ||||    
T  7220 ttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatc 7159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 371 - 476
Target Start/End: Complemental strand, 635 - 530
Alignment:
Q  371 aactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttccgatgtaaaattgttcattttgggttcct 470  Q
    |||||||  |||||||||| || | ||||| |||||| |||||||||||||  ||||| | | ||||||||| ||||||||||  ||||||| ||||| |    
T  635 aactcattatagaaatatatgtatcaaaagtcgtgcattcaacttcttaaacattaaaatgttatgttttccaatgtaaaattactcattttaggttctt 536  T
Q  471 taacat 476  Q
    ||||||    
T  535 taacat 530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 667 - 776
Target Start/End: Original strand, 9155 - 9264
Alignment:
Q  667 atgggttatgatcctctccatttgataaaataaatgaaaatacacaatttggagagagataaacacataaaatagatagtgggtcataccactaagtggg 766  Q
    |||||| | |||| ||||||||||  |||||||||| | ||   ||| ||||||||||||| ||||| ||||||||| |||||||  ||||||||||||     
T  9155 atgggtgaagatcatctccatttggcaaaataaatggagatttgcaagttggagagagatagacacagaaaatagatggtgggtccaaccactaagtgga 9254  T
Q  767 ttccatcatc 776  Q
    ||||| ||||    
T  9255 ttccaccatc 9264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 482 - 580
Target Start/End: Complemental strand, 9351 - 9257
Alignment:
Q  482 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatctttaaaaagagtaaaatataattaatgattgtgg 580  Q
    ||||| |||| ||||||||| |||||| |||||| ||||||||||| |||||  ||||| ||||||| |||||    | ||||||||||||||| ||||    
T  9351 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaaggcacatgaaatcttaaaaaa----ataatataattaatgatggtgg 9257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 344 - 442
Target Start/End: Original strand, 12415 - 12513
Alignment:
Q  344 ttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaagttaaactatcatgttttcc 442  Q
    |||||| ||||| ||||||||||||| |||| ||  || |||||||||| | |||||  ||||| ||||||||||||||  |||| | |||||||||||    
T  12415 ttgtgccctcaaggagacatgttaaagaactaattataaaaatatacgtatcaaaagttgtgcattcaacttcttaaaaactaaaatgtcatgttttcc 12513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 422
Target Start/End: Original strand, 4504 - 4601
Alignment:
Q  325 ctttttggcaaatgttaatttgtgctctcaacgagacatgttaaataactcatagtagaaatatacgtgttaaaagacgtgcaatcaacttcttaaaa 422  Q
    |||||||||||||| ||| |||||| ||||| || |||||||||   ||||||  ||||||||||| | | ||||  |||||| ||||||||||||||    
T  4504 ctttttggcaaatgctaacttgtgccctcaaggacacatgttaagatactcattatagaaatatacatatcaaaatgcgtgcattcaacttcttaaaa 4601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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