View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5618_low_9 (Length: 210)
Name: NF5618_low_9
Description: NF5618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5618_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 9551472 - 9551316
Alignment:
| Q |
17 |
caaaggtagagtagtttttgttgttcctcacaaccataacaacatcttttggtgtgttaaattcaacaatcatgaaaatagaactcaccaaaaggaaaga |
116 |
Q |
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| T |
9551472 |
caaaggtagagtagtttttgttgttcatcacaaccataacaacatcttttggtgtgttaaagtcaacaatcatgaaaatagaaatcaccaaaaggaaaga |
9551373 |
T |
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| Q |
117 |
ggtgttcatgaacaaagtatatttggaccaagaagttggtatagccatagtgtttgt |
173 |
Q |
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| T |
9551372 |
ggtgttcatgaacaaagtatatttggaccaagaacttggtatagccatggtgtttgt |
9551316 |
T |
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