View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5621_high_6 (Length: 295)
Name: NF5621_high_6
Description: NF5621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5621_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 43 - 289
Target Start/End: Original strand, 50526647 - 50526893
Alignment:
| Q |
43 |
ggaacaatatactttttaatgtaaaaaagaaaacactggaatatttctgaagttgtataatcaacaatgatattatcgggtaacttctttaaatgtcgat |
142 |
Q |
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| T |
50526647 |
ggaacaatatactttttaatgtaaaaaagaaaacactggaatatttctgaagttgtataatcaacaatgatattatcgggtaacttctttaaatgtcgat |
50526746 |
T |
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| Q |
143 |
aaagatattatacgcaacgacagtggagtataaagtataaccctccatataccagtatttgttcttcgtaatgttttgaagaatccataaacgtaatata |
242 |
Q |
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| T |
50526747 |
aaagatattatacgcaacgacagtggagtataaagtataaccctccatataccagtatttgttcttcgtaatgttttgaagaatccataaacgtaatata |
50526846 |
T |
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| Q |
243 |
tattcttcgtaataaataaaataattatatcaacaaagaataattta |
289 |
Q |
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| T |
50526847 |
tattcttcgtaataaataaaataattatatcaacaaagaataattta |
50526893 |
T |
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