View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5621_low_11 (Length: 265)
Name: NF5621_low_11
Description: NF5621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5621_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 25 - 249
Target Start/End: Complemental strand, 26493315 - 26493091
Alignment:
| Q |
25 |
tcaccttcacctttacctgtgatatcaccttcccctacagttctatctacaccaccacattctagttggatttctgcaccttccccagctccatcttcaa |
124 |
Q |
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| T |
26493315 |
tcaccttcaccttcacctgtgatatcaccttcccctacagttctatctacaccaccacattctagttggatttctgcaccttccccagctccatcttcaa |
26493216 |
T |
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| Q |
125 |
accaaatgaattcacaaagttcaaacccaaagcatcattctgttgttatatggtcaacagttggaggcttctcattccttgttttggtgtcattcatggt |
224 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26493215 |
accaaatgaattcacaaagttcaaacccaaagcatcattctgttgttatatggtcaacagttggaggattctcattccttgttttggtgtcattcatggt |
26493116 |
T |
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| Q |
225 |
tttcatttgcttcagaagtagtaag |
249 |
Q |
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||||||||||||||||||||||||| |
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| T |
26493115 |
tttcatttgcttcagaagtagtaag |
26493091 |
T |
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