View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5623-Insertion-2 (Length: 816)

Name: NF5623-Insertion-2
Description: NF5623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5623-Insertion-2
NF5623-Insertion-2
[»] chr3 (137 HSPs)
chr3 (309-646)||(7491726-7492059)
chr3 (157-305)||(47878533-47878681)
chr3 (157-305)||(54192897-54193045)
chr3 (188-306)||(29914367-29914485)
chr3 (188-306)||(29963520-29963638)
chr3 (157-305)||(10595393-10595541)
chr3 (189-305)||(16461853-16461969)
chr3 (188-305)||(5858197-5858314)
chr3 (189-305)||(10208414-10208530)
chr3 (189-305)||(10094482-10094598)
chr3 (189-305)||(10100505-10100621)
chr3 (189-305)||(10896655-10896771)
chr3 (194-305)||(10201373-10201484)
chr3 (408-815)||(5966056-5966462)
chr3 (189-306)||(22627579-22627696)
chr3 (189-304)||(54188160-54188275)
chr3 (381-658)||(5052291-5052564)
chr3 (394-645)||(11497069-11497310)
chr3 (188-289)||(10613192-10613293)
chr3 (23-115)||(46934608-46934700)
chr3 (222-306)||(51727460-51727544)
chr3 (23-115)||(30648735-30648827)
chr3 (23-115)||(36734708-36734800)
chr3 (222-305)||(4308735-4308818)
chr3 (381-674)||(11490583-11490872)
chr3 (222-305)||(35918403-35918486)
chr3 (222-305)||(43225827-43225910)
chr3 (240-305)||(10901398-10901463)
chr3 (224-305)||(10949729-10949810)
chr3 (18-115)||(29503423-29503520)
chr3 (222-305)||(20031798-20031882)
chr3 (222-305)||(9605067-9605150)
chr3 (222-304)||(29956218-29956300)
chr3 (222-304)||(30005373-30005455)
chr3 (224-305)||(27762476-27762557)
chr3 (30-115)||(31794044-31794129)
chr3 (18-115)||(49552240-49552337)
chr3 (412-645)||(2919932-2920170)
chr3 (23-115)||(25162402-25162494)
chr3 (234-305)||(11079169-11079240)
chr3 (230-305)||(25690818-25690893)
chr3 (222-305)||(27101714-27101797)
chr3 (224-305)||(47883331-47883412)
chr3 (23-115)||(4178531-4178623)
chr3 (23-115)||(25631542-25631634)
chr3 (23-115)||(32607435-32607527)
chr3 (23-115)||(35499214-35499306)
chr3 (23-115)||(51202270-51202362)
chr3 (32-115)||(3848935-3849018)
chr3 (222-305)||(4535262-4535345)
chr3 (697-816)||(7492069-7492188)
chr3 (23-102)||(36906088-36906167)
chr3 (32-115)||(42719492-42719575)
chr3 (23-97)||(4172533-4172607)
chr3 (24-114)||(29239292-29239382)
chr3 (48-113)||(21488082-21488147)
chr3 (189-253)||(6303015-6303079)
chr3 (23-111)||(37169197-37169285)
chr3 (18-90)||(46178538-46178610)
chr3 (23-114)||(12947323-12947414)
chr3 (36-115)||(22803001-22803080)
chr3 (23-113)||(54378866-54378956)
chr3 (23-92)||(17237771-17237840)
chr3 (32-113)||(43488640-43488718)
chr3 (26-115)||(46322373-46322460)
chr3 (29-95)||(51487060-51487126)
chr3 (29-114)||(53508179-53508265)
chr3 (257-306)||(6302983-6303032)
chr3 (23-115)||(12116063-12116156)
chr3 (257-306)||(27543945-27543994)
chr3 (189-250)||(27543980-27544041)
chr3 (260-305)||(43228032-43228077)
chr3 (34-114)||(4396383-4396463)
chr3 (23-115)||(38855052-38855144)
chr3 (58-106)||(41818195-41818243)
chr3 (23-115)||(44907415-44907506)
chr3 (757-804)||(911464-911511)
chr3 (725-816)||(4130179-4130270)
chr3 (24-99)||(6910735-6910810)
chr3 (29-112)||(29922011-29922094)
chr3 (29-112)||(29971164-29971247)
chr3 (32-106)||(1649377-1649450)
chr3 (23-93)||(2342458-2342528)
chr3 (29-95)||(7546564-7546630)
chr3 (150-192)||(10201308-10201350)
chr3 (150-192)||(10208354-10208396)
chr3 (150-192)||(10896789-10896831)
chr3 (29-95)||(27706298-27706364)
chr3 (32-113)||(40487285-40487364)
chr3 (37-114)||(3606738-3606815)
chr3 (18-115)||(39917414-39917510)
chr3 (157-201)||(6303088-6303132)
chr3 (157-201)||(22627526-22627570)
chr3 (157-201)||(27544050-27544094)
chr3 (58-114)||(35175387-35175443)
chr3 (226-302)||(38002494-38002570)
chr3 (157-201)||(54188284-54188328)
chr3 (32-113)||(36461481-36461559)
chr3 (222-281)||(48390668-48390727)
chr3 (550-645)||(4091888-4091983)
chr3 (550-633)||(4130365-4130448)
chr3 (778-816)||(5052130-5052168)
chr3 (48-115)||(25849805-25849868)
chr3 (600-673)||(911304-911377)
chr3 (759-816)||(2919758-2919815)
chr3 (329-374)||(5052607-5052652)
chr3 (150-187)||(10100445-10100482)
chr3 (329-374)||(11490495-11490540)
chr3 (29-94)||(51923677-51923742)
chr3 (23-115)||(14464476-14464568)
chr3 (58-114)||(25842659-25842715)
chr3 (230-305)||(45882659-45882734)
chr3 (23-115)||(50611434-50611525)
chr3 (23-89)||(4019685-4019752)
chr3 (725-816)||(4092066-4092157)
chr3 (32-113)||(9998427-9998505)
chr3 (32-113)||(10108196-10108274)
chr3 (32-113)||(10233030-10233108)
chr3 (59-106)||(30293529-30293576)
chr3 (29-95)||(16235376-16235442)
chr3 (255-305)||(25388618-25388668)
chr3 (24-86)||(47980708-47980770)
chr3 (24-86)||(47989995-47990057)
chr3 (24-86)||(47999282-47999344)
chr3 (24-86)||(48008569-48008631)
chr3 (773-810)||(3885650-3885687)
chr3 (751-812)||(4079964-4080025)
chr3 (259-304)||(5191374-5191419)
chr3 (114-158)||(5858379-5858424)
chr3 (29-94)||(8914662-8914727)
chr3 (783-816)||(11490984-11491017)
chr3 (32-115)||(20465018-20465098)
chr3 (58-113)||(38545785-38545837)
chr3 (32-81)||(40556672-40556721)
chr3 (58-95)||(42460729-42460766)
chr3 (34-113)||(52923167-52923243)
chr3 (114-158)||(54188341-54188386)
[»] chr2 (98 HSPs)
chr2 (157-305)||(22712878-22713026)
chr2 (157-305)||(30478666-30478814)
chr2 (157-305)||(17943210-17943358)
chr2 (157-305)||(27518003-27518151)
chr2 (189-307)||(33674820-33674938)
chr2 (197-306)||(12781643-12781752)
chr2 (189-306)||(39679697-39679814)
chr2 (189-305)||(22717640-22717756)
chr2 (157-305)||(35894623-35894771)
chr2 (189-305)||(2735858-2735974)
chr2 (189-305)||(39686636-39686752)
chr2 (189-305)||(45567062-45567178)
chr2 (189-305)||(17462088-17462204)
chr2 (189-305)||(2740594-2740710)
chr2 (189-305)||(20050438-20050554)
chr2 (189-305)||(20055184-20055300)
chr2 (23-115)||(459290-459382)
chr2 (18-115)||(4192806-4192903)
chr2 (18-115)||(17319290-17319386)
chr2 (23-115)||(41431001-41431093)
chr2 (18-115)||(8805834-8805931)
chr2 (18-115)||(22421703-22421800)
chr2 (23-115)||(9986358-9986450)
chr2 (21-115)||(9374572-9374666)
chr2 (18-115)||(7015727-7015824)
chr2 (29-114)||(12647970-12648055)
chr2 (18-115)||(32913209-32913306)
chr2 (23-115)||(2808488-2808580)
chr2 (23-115)||(4228106-4228198)
chr2 (23-115)||(45128177-45128269)
chr2 (23-102)||(40659961-40660040)
chr2 (22-115)||(37614141-37614235)
chr2 (23-93)||(40626066-40626136)
chr2 (18-115)||(32197811-32197908)
chr2 (224-305)||(37171202-37171283)
chr2 (224-305)||(38190649-38190730)
chr2 (23-115)||(20047098-20047190)
chr2 (23-115)||(30420651-30420743)
chr2 (23-115)||(36233981-36234073)
chr2 (18-115)||(8971643-8971740)
chr2 (18-115)||(26025426-26025523)
chr2 (34-115)||(27949410-27949491)
chr2 (34-115)||(31580605-31580686)
chr2 (160-255)||(17932356-17932451)
chr2 (43-115)||(27249167-27249239)
chr2 (23-115)||(34598960-34599052)
chr2 (23-115)||(39641874-39641966)
chr2 (24-114)||(10929624-10929715)
chr2 (33-116)||(25087020-25087103)
chr2 (18-115)||(3270245-3270342)
chr2 (222-303)||(5377868-5377948)
chr2 (18-95)||(8308140-8308216)
chr2 (23-116)||(10248119-10248212)
chr2 (23-115)||(3269127-3269219)
chr2 (23-115)||(3269686-3269778)
chr2 (23-115)||(6173605-6173697)
chr2 (23-115)||(21570423-21570515)
chr2 (23-102)||(3725153-3725232)
chr2 (22-113)||(34128735-34128826)
chr2 (259-306)||(45280457-45280504)
chr2 (29-106)||(6358931-6359008)
chr2 (259-304)||(17932328-17932373)
chr2 (29-113)||(29574679-29574763)
chr2 (29-114)||(43397169-43397251)
chr2 (150-192)||(17462222-17462264)
chr2 (32-115)||(4264443-4264523)
chr2 (58-114)||(32448668-32448724)
chr2 (32-90)||(8893187-8893245)
chr2 (23-72)||(32680640-32680689)
chr2 (29-106)||(37416675-37416752)
chr2 (60-113)||(41694618-41694671)
chr2 (67-115)||(11189652-11189700)
chr2 (23-115)||(24587681-24587773)
chr2 (58-114)||(28534004-28534060)
chr2 (157-201)||(33674767-33674811)
chr2 (23-113)||(36943172-36943259)
chr2 (27-115)||(37994242-37994330)
chr2 (23-107)||(38293522-38293606)
chr2 (23-75)||(41712821-41712873)
chr2 (156-192)||(45567196-45567232)
chr2 (32-113)||(1421647-1421725)
chr2 (157-192)||(2735992-2736027)
chr2 (157-192)||(2740728-2740763)
chr2 (58-113)||(17249197-17249252)
chr2 (32-107)||(30923497-30923571)
chr2 (32-79)||(39310934-39310981)
chr2 (157-192)||(39679832-39679867)
chr2 (157-192)||(39686770-39686805)
chr2 (29-95)||(10237289-10237355)
chr2 (71-113)||(18113890-18113932)
chr2 (29-94)||(3308906-3308971)
chr2 (32-81)||(7677953-7678002)
chr2 (114-158)||(12781524-12781569)
chr2 (114-158)||(17943371-17943416)
chr2 (32-81)||(18763439-18763488)
chr2 (114-158)||(20050326-20050371)
chr2 (114-158)||(20055069-20055114)
chr2 (58-107)||(28227737-28227786)
[»] scaffold0209 (1 HSPs)
scaffold0209 (157-305)||(17348-17496)
[»] chr8 (76 HSPs)
chr8 (157-305)||(590466-590614)
chr8 (157-306)||(16757628-16757777)
chr8 (189-305)||(4812902-4813018)
chr8 (189-305)||(25684296-25684412)
chr8 (188-305)||(29555200-29555317)
chr8 (189-305)||(9021522-9021638)
chr8 (189-306)||(28327560-28327677)
chr8 (189-305)||(16752936-16753052)
chr8 (189-305)||(28332284-28332400)
chr8 (381-584)||(18388495-18388694)
chr8 (189-305)||(28895153-28895269)
chr8 (23-113)||(15046870-15046960)
chr8 (18-115)||(43192362-43192459)
chr8 (222-302)||(3275955-3276035)
chr8 (18-114)||(35580428-35580524)
chr8 (18-115)||(11196860-11196957)
chr8 (34-114)||(5333391-5333471)
chr8 (23-115)||(33896058-33896150)
chr8 (23-115)||(44099950-44100041)
chr8 (226-305)||(21033520-21033599)
chr8 (222-305)||(23180008-23180091)
chr8 (18-113)||(33342408-33342503)
chr8 (23-105)||(39153168-39153250)
chr8 (23-115)||(19876187-19876279)
chr8 (23-115)||(29777195-29777287)
chr8 (23-115)||(34611780-34611872)
chr8 (34-115)||(28239820-28239901)
chr8 (23-115)||(2655846-2655938)
chr8 (23-115)||(4808940-4809032)
chr8 (23-115)||(9072694-9072786)
chr8 (23-115)||(27747129-27747221)
chr8 (32-115)||(33298840-33298923)
chr8 (33-114)||(8443558-8443639)
chr8 (18-115)||(15597183-15597280)
chr8 (23-115)||(9498615-9498707)
chr8 (35-115)||(9619373-9619453)
chr8 (23-115)||(11464147-11464239)
chr8 (23-115)||(16794268-16794360)
chr8 (23-115)||(32724497-32724589)
chr8 (222-297)||(22685122-22685197)
chr8 (25-115)||(42448043-42448133)
chr8 (18-115)||(11725652-11725749)
chr8 (26-115)||(24099301-24099390)
chr8 (53-114)||(29617321-29617382)
chr8 (23-102)||(44578012-44578091)
chr8 (49-95)||(36532899-36532945)
chr8 (32-114)||(3673404-3673483)
chr8 (23-115)||(14906939-14907031)
chr8 (23-115)||(43890140-43890232)
chr8 (32-113)||(7883289-7883367)
chr8 (23-94)||(37565916-37565987)
chr8 (24-114)||(8826164-8826254)
chr8 (150-192)||(29555141-29555183)
chr8 (58-114)||(1236743-1236799)
chr8 (58-114)||(1239443-1239499)
chr8 (114-158)||(9021411-9021455)
chr8 (58-114)||(15344295-15344351)
chr8 (58-114)||(15433360-15433416)
chr8 (58-114)||(15524664-15524720)
chr8 (157-201)||(16752883-16752927)
chr8 (29-95)||(18890769-18890835)
chr8 (29-95)||(39657407-39657473)
chr8 (58-115)||(24853454-24853511)
chr8 (23-95)||(20227346-20227418)
chr8 (58-113)||(3240366-3240421)
chr8 (32-113)||(23230606-23230684)
chr8 (68-115)||(23851510-23851557)
chr8 (157-192)||(25684430-25684465)
chr8 (157-192)||(28327695-28327730)
chr8 (157-192)||(28332418-28332453)
chr8 (157-200)||(28895279-28895322)
chr8 (31-114)||(34609792-34609875)
chr8 (65-115)||(15889574-15889624)
chr8 (26-103)||(17430894-17430971)
chr8 (759-816)||(18388260-18388317)
chr8 (58-95)||(41896499-41896536)
[»] scaffold1764 (1 HSPs)
scaffold1764 (157-305)||(1108-1256)
[»] chr5 (72 HSPs)
chr5 (157-305)||(35385814-35385962)
chr5 (189-305)||(25452146-25452262)
chr5 (157-305)||(22672504-22672652)
chr5 (190-305)||(2298413-2298528)
chr5 (23-115)||(42886449-42886541)
chr5 (222-305)||(40222414-40222497)
chr5 (189-299)||(1170470-1170580)
chr5 (223-305)||(42237954-42238036)
chr5 (23-115)||(7613074-7613166)
chr5 (220-306)||(25445218-25445304)
chr5 (222-306)||(1240077-1240161)
chr5 (222-305)||(6747044-6747127)
chr5 (23-115)||(34881689-34881781)
chr5 (23-115)||(43148702-43148794)
chr5 (222-305)||(10529555-10529638)
chr5 (23-115)||(7150351-7150443)
chr5 (23-115)||(27576366-27576458)
chr5 (222-305)||(6744801-6744884)
chr5 (23-102)||(41184469-41184548)
chr5 (18-115)||(15570876-15570972)
chr5 (23-115)||(2057854-2057946)
chr5 (23-115)||(27266875-27266967)
chr5 (18-113)||(30298174-30298269)
chr5 (23-113)||(19259830-19259919)
chr5 (23-113)||(43261837-43261927)
chr5 (18-115)||(781355-781452)
chr5 (18-115)||(21060298-21060395)
chr5 (23-115)||(3271418-3271510)
chr5 (23-99)||(11767780-11767856)
chr5 (18-114)||(16981256-16981352)
chr5 (23-115)||(36344507-36344598)
chr5 (222-305)||(4409797-4409880)
chr5 (18-115)||(19280961-19281058)
chr5 (18-115)||(27751892-27751989)
chr5 (23-115)||(7246930-7247022)
chr5 (23-115)||(18677481-18677573)
chr5 (23-115)||(28235556-28235648)
chr5 (23-115)||(30371697-30371789)
chr5 (407-578)||(16447283-16447459)
chr5 (24-115)||(19983371-19983462)
chr5 (24-115)||(10649619-10649707)
chr5 (222-303)||(39854226-39854307)
chr5 (23-115)||(7241754-7241846)
chr5 (23-115)||(35475353-35475445)
chr5 (23-115)||(42579859-42579951)
chr5 (23-113)||(7886956-7887046)
chr5 (23-115)||(26578223-26578315)
chr5 (53-115)||(31802487-31802549)
chr5 (23-115)||(20257711-20257802)
chr5 (58-113)||(10332598-10332653)
chr5 (32-113)||(14726511-14726589)
chr5 (58-113)||(19120896-19120951)
chr5 (65-115)||(4954005-4954055)
chr5 (29-95)||(14211177-14211243)
chr5 (250-300)||(17841766-17841816)
chr5 (29-95)||(19103539-19103605)
chr5 (29-95)||(28540978-28541044)
chr5 (29-115)||(35921044-35921130)
chr5 (58-107)||(19349680-19349729)
chr5 (29-89)||(2979384-2979444)
chr5 (157-192)||(1170598-1170633)
chr5 (23-106)||(1582148-1582231)
chr5 (23-106)||(1602584-1602667)
chr5 (32-113)||(6012188-6012266)
chr5 (23-106)||(11192338-11192421)
chr5 (32-113)||(24229834-24229912)
chr5 (157-192)||(25452280-25452315)
chr5 (32-113)||(38597757-38597835)
chr5 (24-102)||(28097125-28097203)
chr5 (255-305)||(31179883-31179933)
chr5 (29-95)||(39567252-39567318)
chr5 (32-81)||(13007189-13007238)
[»] chr6 (76 HSPs)
chr6 (157-292)||(25941330-25941465)
chr6 (189-305)||(13883128-13883244)
chr6 (189-305)||(31249127-31249243)
chr6 (189-305)||(35201739-35201855)
chr6 (189-305)||(13878380-13878496)
chr6 (189-305)||(26887638-26887754)
chr6 (189-307)||(30975112-30975230)
chr6 (189-307)||(30981551-30981669)
chr6 (189-307)||(30987715-30987833)
chr6 (189-305)||(17695266-17695382)
chr6 (189-306)||(25466315-25466432)
chr6 (189-305)||(35208974-35209090)
chr6 (204-305)||(16785572-16785673)
chr6 (23-115)||(25337539-25337631)
chr6 (23-115)||(33543636-33543728)
chr6 (222-305)||(1230684-1230767)
chr6 (222-305)||(26064756-26064839)
chr6 (222-305)||(26084725-26084808)
chr6 (18-115)||(34489214-34489311)
chr6 (23-115)||(16419127-16419219)
chr6 (23-115)||(35001559-35001651)
chr6 (18-115)||(23947334-23947431)
chr6 (23-115)||(4984583-4984675)
chr6 (23-115)||(8196423-8196515)
chr6 (23-115)||(28635137-28635229)
chr6 (227-306)||(28241782-28241861)
chr6 (18-115)||(17237301-17237398)
chr6 (222-305)||(26642829-26642912)
chr6 (222-305)||(26748795-26748878)
chr6 (227-301)||(22343257-22343331)
chr6 (26-115)||(4352012-4352101)
chr6 (23-100)||(8028149-8028226)
chr6 (224-305)||(13467955-13468036)
chr6 (23-115)||(4088429-4088521)
chr6 (23-115)||(10228648-10228740)
chr6 (23-115)||(25064205-25064297)
chr6 (23-115)||(12652913-12653005)
chr6 (259-305)||(33215499-33215545)
chr6 (18-115)||(4468522-4468619)
chr6 (35-116)||(7881117-7881198)
chr6 (18-115)||(12165804-12165900)
chr6 (58-114)||(26588521-26588577)
chr6 (51-115)||(33110608-33110672)
chr6 (23-115)||(33740594-33740686)
chr6 (222-305)||(22352303-22352386)
chr6 (24-114)||(7976226-7976316)
chr6 (29-95)||(30493488-30493554)
chr6 (32-114)||(31575556-31575638)
chr6 (35-116)||(7876059-7876140)
chr6 (23-102)||(17334747-17334826)
chr6 (32-94)||(7027812-7027874)
chr6 (150-192)||(26887578-26887620)
chr6 (23-115)||(1704166-1704258)
chr6 (23-115)||(8496936-8497028)
chr6 (157-201)||(13878505-13878549)
chr6 (230-305)||(15533145-15533220)
chr6 (32-115)||(25092437-25092520)
chr6 (26-115)||(8266614-8266703)
chr6 (257-306)||(14507668-14507717)
chr6 (29-94)||(30776624-30776689)
chr6 (23-115)||(31296769-31296862)
chr6 (58-94)||(22571459-22571495)
chr6 (58-94)||(28981162-28981198)
chr6 (157-192)||(13883262-13883297)
chr6 (32-113)||(33053218-33053296)
chr6 (29-95)||(1523360-1523426)
chr6 (24-113)||(1933742-1933832)
chr6 (31-115)||(6957111-6957192)
chr6 (29-95)||(8102678-8102744)
chr6 (32-78)||(34018522-34018568)
chr6 (29-94)||(14801779-14801844)
chr6 (114-158)||(17695155-17695200)
chr6 (114-158)||(25466203-25466248)
chr6 (114-158)||(25941478-25941523)
chr6 (61-114)||(30140574-30140627)
chr6 (58-113)||(32327267-32327319)
[»] chr1 (74 HSPs)
chr1 (188-305)||(9521367-9521484)
chr1 (157-305)||(21353708-21353857)
chr1 (157-305)||(2232262-2232419)
chr1 (394-645)||(17312158-17312405)
chr1 (189-305)||(9526117-9526233)
chr1 (23-115)||(39927570-39927662)
chr1 (222-305)||(2393729-2393812)
chr1 (26-115)||(18569326-18569415)
chr1 (222-305)||(2401643-2401726)
chr1 (222-305)||(2617280-2617363)
chr1 (23-114)||(3871381-3871472)
chr1 (224-306)||(25133680-25133762)
chr1 (18-115)||(48365781-48365878)
chr1 (23-115)||(5324574-5324666)
chr1 (23-115)||(7342695-7342787)
chr1 (234-306)||(23689313-23689385)
chr1 (23-115)||(25406300-25406392)
chr1 (23-115)||(28035112-28035204)
chr1 (23-115)||(31836780-31836872)
chr1 (23-115)||(33291434-33291526)
chr1 (23-115)||(39987362-39987454)
chr1 (23-115)||(51868661-51868753)
chr1 (26-115)||(9687220-9687309)
chr1 (18-115)||(11453903-11454000)
chr1 (34-115)||(40881028-40881109)
chr1 (23-115)||(5701232-5701324)
chr1 (23-115)||(9919362-9919454)
chr1 (23-115)||(51871836-51871928)
chr1 (32-115)||(9172472-9172555)
chr1 (32-115)||(9180454-9180537)
chr1 (18-115)||(14545487-14545583)
chr1 (18-115)||(34519100-34519197)
chr1 (26-115)||(44637397-44637486)
chr1 (29-114)||(47132861-47132946)
chr1 (23-115)||(7997762-7997854)
chr1 (23-115)||(50166115-50166207)
chr1 (32-115)||(45426082-45426165)
chr1 (18-115)||(7312121-7312212)
chr1 (23-100)||(19723306-19723383)
chr1 (18-115)||(41081720-41081817)
chr1 (23-115)||(27872711-27872803)
chr1 (23-115)||(50272156-50272248)
chr1 (23-115)||(38520547-38520642)
chr1 (35-115)||(19715911-19715990)
chr1 (23-111)||(20266275-20266363)
chr1 (43-115)||(35584634-35584706)
chr1 (27-109)||(29837646-29837728)
chr1 (29-114)||(31692515-31692600)
chr1 (23-115)||(30879049-30879140)
chr1 (58-114)||(49626901-49626957)
chr1 (58-113)||(34528717-34528772)
chr1 (31-113)||(9341687-9341769)
chr1 (29-95)||(16161792-16161858)
chr1 (32-114)||(16262822-16262904)
chr1 (23-100)||(32679158-32679235)
chr1 (23-115)||(30818367-30818454)
chr1 (550-633)||(13933792-13933875)
chr1 (29-95)||(36775782-36775848)
chr1 (58-115)||(12635157-12635214)
chr1 (58-95)||(34413162-34413199)
chr1 (58-114)||(19060897-19060953)
chr1 (257-305)||(20291280-20291328)
chr1 (58-114)||(24582938-24582994)
chr1 (123-158)||(9521549-9521584)
chr1 (157-192)||(9526251-9526286)
chr1 (251-305)||(13461338-13461392)
chr1 (58-115)||(14872630-14872684)
chr1 (771-813)||(17311984-17312026)
chr1 (65-114)||(568828-568877)
chr1 (25-114)||(4396945-4397034)
chr1 (114-158)||(9526299-9526344)
chr1 (58-113)||(34878328-34878380)
chr1 (21-106)||(39724932-39725017)
chr1 (58-95)||(48750168-48750205)
[»] scaffold0256 (1 HSPs)
scaffold0256 (188-305)||(15976-16093)
[»] chr7 (86 HSPs)
chr7 (157-305)||(7464881-7465029)
chr7 (157-305)||(34547225-34547373)
chr7 (157-305)||(30246642-30246790)
chr7 (189-305)||(7069433-7069549)
chr7 (189-299)||(3320463-3320573)
chr7 (188-305)||(8378832-8378949)
chr7 (189-305)||(7074440-7074556)
chr7 (189-305)||(25405046-25405162)
chr7 (189-299)||(3325211-3325321)
chr7 (189-305)||(44512941-44513057)
chr7 (188-299)||(25409809-25409920)
chr7 (189-305)||(25351005-25351121)
chr7 (189-305)||(25356699-25356815)
chr7 (23-115)||(17611094-17611186)
chr7 (18-115)||(23425388-23425485)
chr7 (23-115)||(22927886-22927978)
chr7 (23-115)||(32521943-32522035)
chr7 (23-115)||(45199048-45199140)
chr7 (18-115)||(6001985-6002082)
chr7 (18-115)||(35667248-35667345)
chr7 (222-303)||(40946076-40946157)
chr7 (224-308)||(44144357-44144441)
chr7 (23-115)||(48207870-48207962)
chr7 (18-115)||(31235808-31235905)
chr7 (23-115)||(1448846-1448938)
chr7 (23-115)||(1485273-1485365)
chr7 (23-115)||(23085490-23085582)
chr7 (23-115)||(23786545-23786636)
chr7 (23-115)||(35496191-35496283)
chr7 (23-115)||(42067077-42067169)
chr7 (23-115)||(46818432-46818524)
chr7 (24-95)||(3394426-3394497)
chr7 (23-102)||(26583683-26583762)
chr7 (26-115)||(6558849-6558938)
chr7 (23-115)||(42408331-42408423)
chr7 (23-115)||(46821984-46822076)
chr7 (23-102)||(14627908-14627987)
chr7 (23-102)||(26492334-26492413)
chr7 (23-113)||(969497-969587)
chr7 (23-115)||(20083302-20083399)
chr7 (18-115)||(20116546-20116643)
chr7 (23-115)||(34773680-34773772)
chr7 (23-115)||(46339023-46339115)
chr7 (60-115)||(32684674-32684729)
chr7 (259-305)||(48457441-48457487)
chr7 (18-115)||(17499675-17499772)
chr7 (18-115)||(17553442-17553539)
chr7 (29-114)||(24069443-24069528)
chr7 (18-94)||(17223036-17223112)
chr7 (23-115)||(42311249-42311341)
chr7 (23-74)||(35261268-35261319)
chr7 (32-114)||(25068045-25068126)
chr7 (29-95)||(28476180-28476246)
chr7 (18-64)||(36143829-36143875)
chr7 (23-108)||(7640795-7640880)
chr7 (23-95)||(22742891-22742963)
chr7 (32-95)||(24350909-24350972)
chr7 (23-97)||(1100801-1100875)
chr7 (29-95)||(1749219-1749285)
chr7 (259-305)||(2120592-2120638)
chr7 (29-95)||(35132900-35132966)
chr7 (257-306)||(3878321-3878370)
chr7 (32-81)||(9450216-9450265)
chr7 (26-114)||(3224459-3224547)
chr7 (24-80)||(21266360-21266416)
chr7 (32-114)||(37837507-37837586)
chr7 (23-95)||(44311859-44311931)
chr7 (32-114)||(45349848-45349927)
chr7 (38-113)||(5775172-5775247)
chr7 (157-192)||(25405180-25405215)
chr7 (32-113)||(30756869-30756947)
chr7 (80-115)||(36143875-36143910)
chr7 (33-95)||(48930730-48930792)
chr7 (32-81)||(19296833-19296882)
chr7 (114-158)||(25409964-25410009)
chr7 (114-158)||(30246803-30246848)
chr7 (69-114)||(31482144-31482189)
chr7 (32-81)||(34899686-34899735)
chr7 (32-81)||(39228978-39229027)
chr7 (257-306)||(40837213-40837262)
chr7 (32-85)||(40993145-40993198)
chr7 (29-114)||(41553483-41553568)
chr7 (29-114)||(41553828-41553913)
chr7 (29-114)||(41554173-41554258)
chr7 (32-81)||(42978573-42978622)
chr7 (114-158)||(44512829-44512874)
[»] chr4 (106 HSPs)
chr4 (157-305)||(15316630-15316778)
chr4 (189-305)||(16489001-16489117)
chr4 (189-305)||(31300074-31300190)
chr4 (174-305)||(15311994-15312125)
chr4 (189-306)||(11853201-11853318)
chr4 (189-306)||(40636867-40636984)
chr4 (188-306)||(15830812-15830930)
chr4 (204-305)||(18586616-18586717)
chr4 (189-305)||(8528918-8529034)
chr4 (23-113)||(2624479-2624567)
chr4 (222-305)||(4884531-4884614)
chr4 (407-627)||(5988948-5989173)
chr4 (21-115)||(868141-868235)
chr4 (18-115)||(3336172-3336270)
chr4 (18-115)||(10359563-10359660)
chr4 (18-115)||(18138929-18139026)
chr4 (18-115)||(35964991-35965088)
chr4 (18-115)||(49126142-49126239)
chr4 (23-115)||(4643839-4643931)
chr4 (23-115)||(25273864-25273956)
chr4 (23-115)||(46991146-46991238)
chr4 (23-115)||(56194582-56194674)
chr4 (222-305)||(6764654-6764737)
chr4 (222-301)||(8631879-8631958)
chr4 (18-115)||(35261167-35261264)
chr4 (23-115)||(8009377-8009469)
chr4 (33-115)||(10389770-10389852)
chr4 (23-113)||(27593845-27593935)
chr4 (156-303)||(2485244-2485390)
chr4 (23-115)||(6972791-6972883)
chr4 (23-115)||(9528893-9528985)
chr4 (23-115)||(29965616-29965708)
chr4 (23-115)||(53616666-53616758)
chr4 (18-113)||(51317961-51318056)
chr4 (231-305)||(4556511-4556585)
chr4 (23-113)||(31381690-31381780)
chr4 (23-113)||(38706728-38706818)
chr4 (227-305)||(47868195-47868273)
chr4 (23-100)||(9645580-9645657)
chr4 (23-115)||(37188610-37188702)
chr4 (23-115)||(43154030-43154122)
chr4 (226-305)||(16689394-16689472)
chr4 (224-305)||(25699401-25699482)
chr4 (225-305)||(7050722-7050802)
chr4 (29-113)||(22300824-22300908)
chr4 (23-115)||(43444374-43444466)
chr4 (150-201)||(18586741-18586792)
chr4 (23-113)||(1531889-1531979)
chr4 (35-113)||(31359797-31359875)
chr4 (41-115)||(47417661-47417735)
chr4 (18-115)||(1931732-1931829)
chr4 (18-115)||(12265431-12265527)
chr4 (18-115)||(21090128-21090225)
chr4 (29-114)||(52944286-52944371)
chr4 (35-115)||(9283904-9283984)
chr4 (23-115)||(14183784-14183875)
chr4 (35-115)||(20569248-20569328)
chr4 (253-305)||(26086240-26086292)
chr4 (23-115)||(32952766-32952856)
chr4 (18-114)||(34024454-34024550)
chr4 (23-115)||(44947393-44947485)
chr4 (51-115)||(49410232-49410296)
chr4 (23-114)||(51888260-51888351)
chr4 (23-115)||(50766528-50766617)
chr4 (23-115)||(36204432-36204525)
chr4 (34-114)||(18048863-18048943)
chr4 (23-102)||(49680522-49680601)
chr4 (29-95)||(27651915-27651981)
chr4 (32-114)||(28857380-28857462)
chr4 (44-114)||(37683880-37683950)
chr4 (48-102)||(45228070-45228124)
chr4 (29-114)||(52204380-52204465)
chr4 (23-95)||(2115624-2115695)
chr4 (724-816)||(5988756-5988848)
chr4 (32-114)||(56156691-56156770)
chr4 (32-113)||(32766495-32766573)
chr4 (27-97)||(52097950-52098023)
chr4 (29-95)||(6155294-6155359)
chr4 (29-95)||(36194680-36194746)
chr4 (29-111)||(52933996-52934078)
chr4 (32-113)||(4142802-4142883)
chr4 (32-115)||(11300039-11300119)
chr4 (29-106)||(33332628-33332705)
chr4 (58-111)||(43853446-43853499)
chr4 (62-114)||(9048672-9048724)
chr4 (58-114)||(9643392-9643448)
chr4 (230-305)||(16631068-16631143)
chr4 (24-115)||(21554824-21554916)
chr4 (58-94)||(47320460-47320496)
chr4 (157-192)||(11853336-11853371)
chr4 (271-305)||(4569723-4569757)
chr4 (329-379)||(5989237-5989287)
chr4 (257-307)||(7941131-7941181)
chr4 (29-95)||(31891359-31891425)
chr4 (23-81)||(35348279-35348337)
chr4 (32-114)||(36161690-36161771)
chr4 (257-307)||(37089866-37089916)
chr4 (69-107)||(42032577-42032615)
chr4 (58-95)||(9145954-9145991)
chr4 (114-158)||(15312155-15312200)
chr4 (114-158)||(15830974-15831019)
chr4 (58-111)||(22038854-22038907)
chr4 (32-81)||(22611164-22611213)
chr4 (32-81)||(26633750-26633799)
chr4 (35-92)||(35395741-35395798)
chr4 (32-77)||(37030242-37030287)
[»] scaffold0006 (1 HSPs)
scaffold0006 (157-288)||(224510-224641)
[»] scaffold0004 (1 HSPs)
scaffold0004 (157-305)||(188605-188753)
[»] scaffold0603 (2 HSPs)
scaffold0603 (396-645)||(4281-4526)
scaffold0603 (721-800)||(4605-4684)
[»] scaffold0131 (2 HSPs)
scaffold0131 (189-303)||(30795-30909)
scaffold0131 (150-201)||(30918-30969)
[»] scaffold0552 (1 HSPs)
scaffold0552 (222-305)||(1266-1349)
[»] scaffold0002 (1 HSPs)
scaffold0002 (23-115)||(453901-453993)
[»] scaffold0038 (1 HSPs)
scaffold0038 (227-306)||(41944-42023)
[»] scaffold0495 (1 HSPs)
scaffold0495 (23-115)||(5367-5459)
[»] scaffold0347 (1 HSPs)
scaffold0347 (32-115)||(5988-6071)
[»] scaffold0426 (1 HSPs)
scaffold0426 (42-115)||(6293-6366)
[»] scaffold0264 (1 HSPs)
scaffold0264 (34-115)||(20412-20493)
[»] scaffold0014 (1 HSPs)
scaffold0014 (23-115)||(201388-201480)
[»] scaffold0003 (1 HSPs)
scaffold0003 (32-115)||(361815-361898)
[»] scaffold0127 (1 HSPs)
scaffold0127 (32-113)||(15452-15531)
[»] scaffold0042 (1 HSPs)
scaffold0042 (32-114)||(92545-92627)
[»] scaffold0146 (1 HSPs)
scaffold0146 (23-92)||(16359-16428)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-115)||(83454-83543)
[»] scaffold0016 (1 HSPs)
scaffold0016 (265-306)||(120568-120609)
[»] scaffold0113 (1 HSPs)
scaffold0113 (23-95)||(36723-36795)
[»] scaffold0267 (1 HSPs)
scaffold0267 (710-816)||(18927-19033)
[»] scaffold0445 (1 HSPs)
scaffold0445 (32-114)||(1305-1384)
[»] scaffold0039 (1 HSPs)
scaffold0039 (23-114)||(93055-93147)
[»] scaffold0888 (1 HSPs)
scaffold0888 (29-95)||(1750-1816)
[»] scaffold0136 (1 HSPs)
scaffold0136 (32-115)||(10090-10170)


Alignment Details
Target: chr3 (Bit Score: 152; Significance: 5e-80; HSPs: 137)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 309 - 646
Target Start/End: Original strand, 7491726 - 7492059
Alignment:
Q  309 gcaaagaatttctaatctagacaacttatcaaattcattaaatgaatcatatagccctctattgtaggacagcctgttaccatacgaagatgaaaatttt 408  Q
    ||||||||  ||||||| | |||||| | |||||||||||||||||||||| | |||||||||||| ||||||||||||||||| ||||| ||||   ||    
T  7491726 gcaaagaaaatctaatccaaacaactcagcaaattcattaaatgaatcatacaaccctctattgtaagacagcctgttaccatatgaagacgaaaccgtt 7491825  T
Q  409 gtagctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatcaacgaccttgacacaagtacatcaatta 508  Q
    ||||||||||||||| ||| |||||||| |||||  ||| ||| || || ||||||||||| | ||||||||||||| |||||||||||||||||    |    
T  7491826 gtagctaaatcatgggtgaggttatgcacttcaacgtttgcttccttattaccaatagatcatcgatgtatcaacgaacttgacacaagtacatc----a 7491921  T
Q  509 aagtatgcttctccaactttttcctgatctgtggacgattctactaagccttctgcaatccacaactgaactaccatcnnnnnnnctaatatggacttct 608  Q
    |||||| ||||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||||||||| |||        |||| ||||||||||    
T  7491922 aagtattcttctccaaatttttcatgatctgtgtacgattctacaaagccttctgcaatccacaactgaactaacatatttttttctaagatggacttct 7492021  T
Q  609 tcggaaaaattgaacaataatcaaaacaccgttttaac 646  Q
    | |||||||| |||||||| ||||||||||||||||||    
T  7492022 ttggaaaaatagaacaatattcaaaacaccgttttaac 7492059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 47878533 - 47878681
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47878533 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 47878632  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47878633 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 47878681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 157 - 305
Target Start/End: Complemental strand, 54193045 - 54192897
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||   | |||||||||||||||||||||||||||||||||    
T  54193045 aaaatacgttttatttttatcttcagcgcgaccatcatggcacgaaaaatccagtagcttccttaggatcttgcttcaacaatcgtggcgcgatgcttct 54192946  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  54192945 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 54192897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 29914367 - 29914485
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29914367 ccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 29914466  T
Q  288 tttaagttaactctcacag 306  Q
    ||||||||||||| |||||    
T  29914467 tttaagttaactcccacag 29914485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 188 - 306
Target Start/End: Original strand, 29963520 - 29963638
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29963520 ccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 29963619  T
Q  288 tttaagttaactctcacag 306  Q
    ||||||||||||| |||||    
T  29963620 tttaagttaactcccacag 29963638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 10595393 - 10595541
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    |||||||||||||    |||| |||||||  ||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||| ||| ||||    
T  10595393 aaaatacgttttaaaaatatcttcagcgcctccatcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcaatgtttct 10595492  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10595493 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 10595541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 16461969 - 16461853
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16461969 catcgtggcacgatttttccagtagtttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 16461870  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  16461869 ttaagttaactctcaca 16461853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 188 - 305
Target Start/End: Complemental strand, 5858314 - 5858197
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    ||||| |||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5858314 ccatcgtggcacgaaatttccagtagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagattcctgat 5858215  T
Q  288 tttaagttaactctcaca 305  Q
    ||||||||||||||||||    
T  5858214 tttaagttaactctcaca 5858197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 10208414 - 10208530
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10208414 catcgtggcacgaaatttccagtgtcttcccagaaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 10208513  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  10208514 ttaagttaactctcaca 10208530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 10094482 - 10094598
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  10094482 catcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtgacgcgatgcttctccatcgtggaacgatactccagatttctgatt 10094581  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  10094582 ttaagttaactctcaca 10094598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 10100505 - 10100621
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  10100505 catcgtggcacgaaatttccagtgtcttcccagaaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactctagatttctgatt 10100604  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  10100605 ttaagttaactctcaca 10100621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 10896771 - 10896655
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||||||||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  10896771 catcgtggcacgaaatttccagtagcttcctaggaaccatgcttcagcaatcgtggcgcgatgcttctccatcgtggcacgatactccatatttctgatt 10896672  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  10896671 ttaagttaactctcaca 10896655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 10201373 - 10201484
Alignment:
Q  194 tggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaag 293  Q
    ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  10201373 tggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggaacgatactccagatttctgattttaag 10201472  T
Q  294 ttaactctcaca 305  Q
    |||| |||||||    
T  10201473 ttaaatctcaca 10201484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 408 - 815
Target Start/End: Complemental strand, 5966462 - 5966056
Alignment:
Q  408 tgtagctaaatcatggatgaagt-tatgcatttcaaattttactttctcatcaccaatagatctttgatgtatcaacgaccttgacacaagtacatcaat 506  Q
    |||||||||||||||||  |||| ||||||||||||| |||  || ||||| ||||||||||  |||||| | ||| ||||||||||| ||||||||||     
T  5966462 tgtagctaaatcatggac-aagtgtatgcatttcaaagttttgttcctcattaccaatagattgttgatgcagcaatgaccttgacactagtacatcaa- 5966365  T
Q  507 taaagtatgcttctccaactttttcctgatctgtggacgattctactaagccttctgcaatccacaactgaactaccatcnnnnnnnctaatatggactt 606  Q
       ||||| |||| |||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||         |||  ||||||||    
T  5966364 ---agtattcttcaccaactttttcctggtttatggacgattctactaagccttctgcaatccacaactgaactaccaaatttttttctatgatggactt 5966268  T
Q  607 cttcggaaaaattgaacaataatcaaaacaccgttttaacagagctgaaagaaaatcatagctcaatttgagagaagtatgcacttcataaactat--at 704  Q
    |||||||||||||||||||||  |||| ||   |||||| ||||  |||||| | | |||| ||| ||  | | |||   | || |||| | ||||  ||    
T  5966267 cttcggaaaaattgaacaatatgcaaagcagttttttaaaagagtcgaaagatagtgatagttcagttgtataaaaggtcgaacatcatgatctatcaat 5966168  T
Q  705 -cctggatgttactgtgtagcacataattccagtcattttgggaccatttggagcgaagaaaagccccaagtgctactgcagctaatggtaatccatcac 803  Q
      | | |||| ||| ||||||||||||||||||| || | ||||| |||||| |||||||| | ||||||||||||||||||| |||||| |||||| ||    
T  5966167 aaccgaatgtcactttgtagcacataattccagtaatctggggacaatttggtgcgaagaatatccccaagtgctactgcagcaaatggtgatccataac 5966068  T
Q  804 acttttttgcaa 815  Q
    | || |||||||    
T  5966067 atttatttgcaa 5966056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 22627579 - 22627696
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||  |||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  22627579 catcgtggcacgatttttccagtagcttcctcagaatcttgcttcaacaatcgtggcgagatgcttctccatcgtggcacgatactccagatttctgatt 22627678  T
Q  289 ttaagttaactctcacag 306  Q
    ||||||||||||||||||    
T  22627679 ttaagttaactctcacag 22627696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 189 - 304
Target Start/End: Complemental strand, 54188275 - 54188160
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcc-caggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    |||| ||||||||||  ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54188275 catcgtggcacgaaaaatccagtagcttcctcagga-tcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattcttcagatttctgat 54188177  T
Q  288 tttaagttaactctcac 304  Q
    |||||||||||||||||    
T  54188176 tttaagttaactctcac 54188160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 381 - 658
Target Start/End: Complemental strand, 5052564 - 5052291
Alignment:
Q  381 cctgttaccatacgaagatgaaaattttgtagctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatc 480  Q
    |||| ||| ||| ||||||||||   |||| || |||||||||| || | ||||||||||||| ||| ||| |||||  |||||||||  | ||||||||    
T  5052564 cctggtacaatatgaagatgaaaccattgtggcaaaatcatggaggaggctatgcatttcaaagtttgcttcctcattgccaatagattgtcgatgtatc 5052465  T
Q  481 aacgaccttgacacaagtacatcaattaaagtatgcttctccaactttttcctgatctgtggacgattctactaagccttctgcaatccacaactgaact 580  Q
    ||||| |||||||| ||| ||||||    ||||  ||||||| |||||||||||||||| ||| |||||||| || |||||||||||||||||||||||     
T  5052464 aacgatcttgacactagttcatcaa----agtactcttctccgactttttcctgatctgcggaggattctaccaacccttctgcaatccacaactgaacc 5052369  T
Q  581 accatcnnnnnnnctaatatggacttcttcggaaaaattgaacaataatcaaaacaccgttttaacagagctgaaaga 658  Q
    ||||         |||| ||| | ||||||||||||||||||||||| ||||| ||| |||||||  |||||||||||    
T  5052368 accacatttttttctaagatgtatttcttcggaaaaattgaacaatattcaaagcactgttttaaaggagctgaaaga 5052291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 394 - 645
Target Start/End: Original strand, 11497069 - 11497310
Alignment:
Q  394 gaagatgaaaattttgtagctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatcaacgaccttgaca 493  Q
    ||||||||||   ||||||||||||||||||| | ||| ||||||||||| ||| |||      |||||||||| | | ||||||||||||||| ||| |    
T  11497069 gaagatgaaaccattgtagctaaatcatggataaggttttgcatttcaaagttttctt------caccaatagaccgtcgatgtatcaacgaccatgata 11497162  T
Q  494 caagtacatcaattaaagtatgcttctccaactttttcctgatctgtggacgattctactaagccttctgcaatccacaactgaactaccatcnnnnnnn 593  Q
    | |||| |||||    ||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||             
T  11497163 ctagtatatcaa----agtattcttttccgactttttcctgatctatggacgattctactaagccttctgcaatccacagctgaactatcacattttttt 11497258  T
Q  594 ctaatatggacttcttcggaaaaattgaacaataatcaaaacaccgttttaa 645  Q
    |||| ||||| ||||||||||||||||| |||||  |||| |||||||||||    
T  11497259 ctaagatggagttcttcggaaaaattgagcaatatgcaaagcaccgttttaa 11497310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 10613192 - 10613293
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    ||||| ||||| |||||||||||||||||||   ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  10613192 ccatcgtggcatgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggtgcgatgtttctccatcgtggcacgattctccagatttctgat 10613291  T
Q  288 tt 289  Q
    ||    
T  10613292 tt 10613293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 46934608 - 46934700
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||  ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46934608 tttttcttgttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttca 46934700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 51727460 - 51727544
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51727460 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcacag 51727544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 30648827 - 30648735
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  30648827 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgctttcccatcttcttgcggtgttca 30648735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 36734800 - 36734708
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||||||||  | |||| ||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  36734800 tttttcttcgtgatttcgtcatccaaatgtgatggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttca 36734708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 4308735 - 4308818
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  4308735 gaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattctccagaattctgattttaagttaactctcaca 4308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 381 - 674
Target Start/End: Original strand, 11490583 - 11490872
Alignment:
Q  381 cctgttaccatacgaagatgaaaattttgtagctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatc 480  Q
    |||| ||| ||| ||||||||||   |||||||||| |||| | ||| | ||| |||||||||  || ||| ||||||||||||||||  | ||| |||     
T  11490583 cctggtacaatatgaagatgaaatcattgtagctaattcattggtgaggctatacatttcaaagatttcttcctcatcaccaatagattgtcgatttatt 11490682  T
Q  481 aacgaccttgacacaagtacatcaattaaagtatgcttctccaactttttcctgatctgtggacgattctactaagccttctgcaatccacaactgaact 580  Q
    ||||| |||||||| ||| ||||||    ||||| ||||||| ||||||||||| || | ||| |||||||| || |||  || ||||||||||||||||    
T  11490683 aacgatcttgacactagttcatcaa----agtattcttctccgactttttcctggtccgcggatgattctaccaaccctcttgtaatccacaactgaact 11490778  T
Q  581 accatcnnnnnnnctaatatggacttcttcggaaaaattgaacaataatcaaaacaccgttttaacagagctgaaagaaaatcatagctcaatt 674  Q
    ||||         |||| ||||||||||||||||||||||||||||| ||||| ||| |||||||  |||| || ||| |||  ||||||||||    
T  11490779 accacatttttttctaagatggacttcttcggaaaaattgaacaatattcaaagcactgttttaaaggagccgatagataatggtagctcaatt 11490872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 35918403 - 35918486
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  35918403 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccataattctgattttaagttaactctcaca 35918486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 43225910 - 43225827
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| |||||||||||||||| || ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43225910 gaattttgcttcaacaatcgtagcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 43225827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 10901463 - 10901398
Alignment:
Q  240 cgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10901463 cgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcaca 10901398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 10949729 - 10949810
Alignment:
Q  224 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||| ||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  10949729 atcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacgtttctccagattcctgattttaagttaactctcaca 10949810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 29503423 - 29503520
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  29503423 taggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgttca 29503520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 20031798 - 20031882
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgctt-ctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||| |  ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20031798 gaatcttgcttcaacaatcgtggcacattgctttctccatcgtggcacgtttctccagatttctgattttaagttaactctcaca 20031882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 9605067 - 9605150
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| |||  |||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  9605067 gaattttgcttcaacaatcgtggcacgaaacttctccatcgtagcacgattctccagaattctgattttaagttaactctcaca 9605150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 222 - 304
Target Start/End: Complemental strand, 29956300 - 29956218
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 304  Q
    |||| ||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  29956300 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtgacacgattatccagaattctgattttaagttaactctcac 29956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 222 - 304
Target Start/End: Complemental strand, 30005455 - 30005373
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 304  Q
    |||| ||||||||||||||||||| ||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  30005455 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtgacacgattatccagaattctgattttaagttaactctcac 30005373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 27762476 - 27762557
Alignment:
Q  224 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||| ||||||||||||||| || |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||    
T  27762476 atcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacgtttcttcagattcctgattttaagttaactctcaca 27762557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 31794044 - 31794129
Alignment:
Q  30 tcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |  |||||||||||||||||    
T  31794044 tcgtgattttgtcatctgagtgtagtggtgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttca 31794129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 49552337 - 49552240
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||||||||||||| ||| || ||||||||||||    
T  49552337 taggttttttctttgtgatttcatcatctaaatgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgttca 49552240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 412 - 645
Target Start/End: Complemental strand, 2920170 - 2919932
Alignment:
Q  412 gctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatcaacgaccttgacacaagtacatcaattaaag 511  Q
    |||||||||||| ||||||||| |||||||||  || ||| |||  || ||||||||| |   ||||| |||||||||||||| |||| |||||    ||    
T  2920170 gctaaatcatgggtgaagttattcatttcaaaccttgcttcctcgccatcaatagatcgtctctgtattaacgaccttgacactagtatatcaa----ag 2920075  T
Q  512 tatgcttctccaactttttcc---------tgatctgtggacgattctactaagccttctgcaatccacaactgaactaccatcnnnnnnnctaatatgg 602  Q
    ||| |||| ||||||||||||         |||  |||||| ||||||||||||||||||||||||||||||||||||||| ||       |||| ||||    
T  2920074 tattcttccccaactttttccgaacttgcctgacttgtggaagattctactaagccttctgcaatccacaactgaactaccctctttttttctaagatgg 2919975  T
Q  603 acttcttcggaaaaattgaacaataatcaaaacaccgttttaa 645  Q
    ||| ||| |||||||||||||||||  |||| || ||||||||    
T  2919974 actcctttggaaaaattgaacaatatgcaaagcagcgttttaa 2919932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 25162402 - 25162494
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| |||||||| || |||||||||||||||||||||| ||||||||||||||| ||||  |||||||||||    
T  25162402 tttttctttgtgatttcatcatctaagtgtggtagtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttca 25162494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 234 - 305
Target Start/End: Complemental strand, 11079240 - 11079169
Alignment:
Q  234 aacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  11079240 aacaatcgtggcacgttgcttctccatcgtggcacgtttctccagattactgattttaagttaactctcaca 11079169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 25690818 - 25690893
Alignment:
Q  230 cttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||| ||| |||||||||||||||||||||||  |||| |||||||||||||||||||||||||    
T  25690818 cttcaacaatcgtggcacgaagcttctccatcgtggcacgattcatcagaattctgattttaagttaactctcaca 25690893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 27101714 - 27101797
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| |||||||||||||| |||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27101714 gaattttgcttcaacaatcatggcacaaaacttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 27101797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 47883331 - 47883412
Alignment:
Q  224 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||| ||||||||||||| | || |||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  47883331 atcttgtttcaacaatcgtgacacgttgcttctccatcgtggcacgtttctccaaattcctgattttaagttaactctcaca 47883412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 4178531 - 4178623
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||| ||| ||||||||||||| ||||||| ||||||||||||  |||||||||||    
T  4178531 tttttctttgtgatttcatcatctaagtgtggtggtttgtttttcatcgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttca 4178623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 25631634 - 25631542
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||  |||||||||||| ||||||| ||||||||||||  |||||||||||    
T  25631634 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttctccgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttca 25631542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 32607435 - 32607527
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | ||||||||||||||||||| || ||||||||||||||||||||  |||||||||||    
T  32607435 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttca 32607527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 35499306 - 35499214
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| | |||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  35499306 tttttctttgtaatttcattatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttca 35499214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 51202362 - 51202270
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||||| || |  |||||||||||    
T  51202362 tttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatttcccatcgtcgtgcggtgttca 51202270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 3849018 - 3848935
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||| | ||||||||||| |||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||    
T  3849018 gtgatttcatcatgtaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccatcttcttgcggtgttca 3848935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 4535345 - 4535262
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||| ||||||||||||||| || |||||||||||||||  | |||||||||||||  ||||||||||||||||||||||    
T  4535345 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgatatgattctccagattcatgattttaagttaactctcaca 4535262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 697 - 816
Target Start/End: Original strand, 7492069 - 7492188
Alignment:
Q  697 aactatatcctggatgttactgtgtagcacataattccagtcattttgggaccatttggagcgaagaaaagccccaagtgctactgcagctaatggtaat 796  Q
    |||| ||||||| |||||||| | ||||| |  ||||| ||||||| ||||| ||||||||| ||||  || |||| ||||||||||||| | |||||||    
T  7492069 aactgtatcctgaatgttactttctagcaaaagattccggtcatttagggacaatttggagcaaagacgagtcccatgtgctactgcagccattggtaat 7492168  T
Q  797 ccatcacacttttttgcaat 816  Q
    ||||||||||||||||||||    
T  7492169 ccatcacacttttttgcaat 7492188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 36906088 - 36906167
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  36906088 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctt 36906167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 42719492 - 42719575
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  42719492 gtgagttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttca 42719575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 4172533 - 4172607
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttccc 97  Q
    |||||||| |||||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  4172533 tttttctttgtgatttcatcatctaagtgtggtggtttgtttttcgtcgtcttgtgcggtgttgtttcatttccc 4172607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 29239292 - 29239382
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||| ||||||||||| || |||||||| || | |||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||    
T  29239292 tttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttc 29239382  T

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Target: chr3; HSP #56
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 21488082 - 21488147
Alignment:
Q  48 agtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  21488082 agtgtggtggtatgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtt 21488147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 6303079 - 6303015
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgct 253  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6303079 catcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgct 6303015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 37169197 - 37169285
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtg 111  Q
    ||||||||| ||||||||||| | ||||||| |||| |||||| ||||||||||||| | |||||||||||| |||| |||||||||||    
T  37169197 tttttcttcttgatttcgtcacccgagtgtgatggtctgttgtccgtcgtcttgtgcagcgttgtttgattttccgtattgttgcggtg 37169285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 46178538 - 46178610
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttg 90  Q
    |||| |||||||||||||||||||| || |||||||||||||| ||||||||| |||||||| ||||||||||    
T  46178538 taggttttttcttcgtgatttcgtcttccgagtgtggtggtgtattgttcgtcatcttgtgcagtgttgtttg 46178610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 12947414 - 12947323
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||| |||||||||||||| | |||||| ||   |||||||||||||||||||||||| ||||||||||||| | |||||||| |||||||    
T  12947414 ttttttttcgtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttc 12947323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 22803001 - 22803080
Alignment:
Q  36 tttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||| ||||||||| ||| |||||||||||||||| ||||| ||||||||||||| ||| | |||||||||||||    
T  22803001 tttcgtcatttgagtgtggcggtttgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttca 22803080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 54378866 - 54378956
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||||||||||| |||| |||||||||||| |||||  |||||||||||||||| |  ||||||||||  |||||| ||||||||||    
T  54378866 tttttcttcgtgattttgtcacctgagtgtggtgatgtgtatttcgtcgtcttgtgcgatcatgtttgatttgtcgtcttattgcggtgtt 54378956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 17237771 - 17237840
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgat 92  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||| |||||||||||||| ||||||||||    
T  17237771 tttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgat 17237840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 43488718 - 43488640
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||||    |||||||||| |||||||||||||||||    
T  43488718 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgtcttgttgcggtgtt 43488640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 46322460 - 46322373
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||| |  ||| || ||| || |||||||||||| |||| |||||||||||| ||| ||||||||||||||||||||    
T  46322460 ttcttcgtgatttcgtcgt--gagcgtagtgttgcgttgttcgtcgttttgtacggtgttgtttgtttttccgtcttgttgcggtgttca 46322373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 51487060 - 51487126
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||||||| |||| |  | |||||||||||||||||||||||| |||||||||||||    
T  51487060 ttcgtgatttcgtcatcttagtgggacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 51487126  T

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Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 53508179 - 53508265
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgattt-cccgtcttgttgcggtgttc 114  Q
    |||||||||||||| ||||| || || | |||||||||||||||||||| || ||||||||||||| ||||| ||||||| ||||||    
T  53508179 ttcgtgatttcgtcgtctgaatgcggcgttgtgttgttcgtcgtcttgtacgatgttgtttgatttccccgttttgttgcagtgttc 53508265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 6303032 - 6302983
Alignment:
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  6303032 ccatcgtggcgcgatgctccagatttctgattttaagttaactctcacag 6302983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 12116063 - 12116156
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgt-gttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| | |||| ||||||||| | | ||||||||| ||||||||||| ||||||||||||||||||||  |||||||||||    
T  12116063 tttttctttgtaatttcattatctaagtgtggtgattttgttgttcgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 12116156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 27543994 - 27543945
Alignment:
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  27543994 ccatcgtggcacgatactccaaatttctgattttaagttaactctcacag 27543945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 27544041 - 27543980
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgat 250  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  27544041 catcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcacgat 27543980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 43228077 - 43228032
Alignment:
Q  260 tcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  43228077 tcgtggcacgattctccagaattctgattttaagttaactctcaca 43228032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 4396463 - 4396383
Alignment:
Q  34 gatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||| || || |||| ||||||||| ||||||||||| || ||||||||||||  || |||||||||||||||    
T  4396463 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttc 4396383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 38855144 - 38855052
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| |||||| |||| |||||||||| |||||||| || ||||||| || ||||||| |  |||||||||||    
T  38855144 tttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgttgtcttgtgtggcgttgtttcatctcccgtcctcgtgcggtgttca 38855052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 41818195 - 41818243
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  41818195 tgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttg 41818243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 44907506 - 44907415
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||| | ||||||||||||||  ||||  |||||||||||    
T  44907506 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgc-gcgttgtttgatttcctatcttcgtgcggtgttca 44907415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 757 - 804
Target Start/End: Original strand, 911464 - 911511
Alignment:
Q  757 gcgaagaaaagccccaagtgctactgcagctaatggtaatccatcaca 804  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||    
T  911464 gcgaagaagacccccaagtgctactgcagctaatggtaatccatcaca 911511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 725 - 816
Target Start/End: Complemental strand, 4130270 - 4130179
Alignment:
Q  725 acataattccagtcattttgggaccatttggagcgaagaaaagccccaagtgctactgcagctaatggtaatccatcacacttttttgcaat 816  Q
    |||| |||||| | || ||| ||| |||||| |||||||||| | |||||||||| ||||||||||||||| |||||||| ||||| |||||    
T  4130270 acatcattccaataatcttgtgacaatttggtgcgaagaaaacctccaagtgctattgcagctaatggtaacccatcacattttttggcaat 4130179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 6910810 - 6910735
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgt 99  Q
    |||||| ||||||||| |||||| ||||||||||| | || |||||||| ||||||| ||||||||||||| ||||    
T  6910810 ttttctccgtgatttcatcatctaagtgtggtggtatattattcgtcgttttgtgcgatgttgtttgattttccgt 6910735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 29922011 - 29922094
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgt 112  Q
    |||||||||||||| ||||||||||| | |||||||||   ||||||||| |  || |||||||||| ||||||||||||||||    
T  29922011 ttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgt 29922094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 29971164 - 29971247
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgt 112  Q
    |||||||||||||| ||||||||||| | |||||||||   ||||||||| |  || |||||||||| ||||||||||||||||    
T  29971164 ttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgt 29971247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 1649377 - 1649450
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    ||||||||||| ||||||||||| | ||| ||||||  ||||||||||||||||| |||||||| ||||||||||    
T  1649377 gtgatttcgtcgtctgagtgtggcgttgtattgttctccgtcttgtgcggtgttg-ttgatttcgcgtcttgttg 1649450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 2342458 - 2342528
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatt 93  Q
    |||||||| |||||||| |||||| ||||||||||| |||| ||||| |||| |||||| |||||||||||    
T  2342458 tttttctttgtgatttcatcatctaagtgtggtggtttgttattcgttgtctagtgcggcgttgtttgatt 2342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 7546564 - 7546630
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | |||||||||||||||||||||||| |||||||||||||    
T  7546564 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 7546630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 10201308 - 10201350
Alignment:
Q  150 taactgaaaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  10201308 taactgaaaaatacgttttatttttatcttcagcgcgaccatc 10201350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 10208354 - 10208396
Alignment:
Q  150 taactgaaaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  10208354 taactgaaaaatacgttttatttttatcttcagcgcgaccatc 10208396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 10896831 - 10896789
Alignment:
Q  150 taactgaaaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  10896831 taactgaaaaatacgttttatttttatcttcagcgcgaccatc 10896789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 27706364 - 27706298
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| ||||||  | |||||||||||||||||||||||| ||||||| |||||    
T  27706364 ttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcgtcttgtgcggcgttgtttaatttc 27706298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 40487285 - 40487364
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | |||||||||||||||||||||||| ||  ||||||||| |||||||| ||||||||    
T  40487285 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtt 40487364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 3606738 - 3606815
Alignment:
Q  37 ttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||| |||||||| ||   ||||||||||||||||||||| || ||||| |||| ||||||||||||| |||||||    
T  3606738 ttcgtcgtctgagtgcggcattgtgttgttcgtcgtcttgtgtggcgttgtatgatatcccgtcttgttgtggtgttc 3606815  T

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Target: chr3; HSP #91
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 39917510 - 39917414
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||| | |||||||| |||||| ||||||||||| |||||||||| ||||||| ||  ||||||||||||  ||||||  |||||||||||    
T  39917510 taggttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgttgtcttgtacgacgttgtttgattt-tcgtcttcgtgcggtgttca 39917414  T

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Target: chr3; HSP #92
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 6303132 - 6303088
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacga 201  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  6303132 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacga 6303088  T

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Target: chr3; HSP #93
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 22627526 - 22627570
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacga 201  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  22627526 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacga 22627570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 27544094 - 27544050
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacga 201  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  27544094 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacga 27544050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 35175387 - 35175443
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||| ||||||||||| | |||||||||||||  |||||||||||||||||    
T  35175387 tgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttc 35175443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 302
Target Start/End: Complemental strand, 38002570 - 38002494
Alignment:
Q  226 cttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctc 302  Q
    ||||||||||||||| || |  | ||||| |||||| || |||| ||||||||||| ||||||||||||||||||||    
T  38002570 cttgcttcaacaatcatgacatgttgcttatccatcatgacacgtttctccagattactgattttaagttaactctc 38002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 54188328 - 54188284
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacga 201  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  54188328 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacga 54188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 36461559 - 36461481
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    |||||||||| |||||||| ||||||||    
T  36461559 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgtcttgtcgcggtgtt 36461481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 48390668 - 48390727
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatt 281  Q
    |||||||||||||||||| ||||| || ||||||||||||||| |||  |||||||||||    
T  48390668 gaatcttgcttcaacaattgtggcacgttgcttctccatcgtgacacatttctccagatt 48390727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 645
Target Start/End: Original strand, 4091888 - 4091983
Alignment:
Q  550 tactaagccttctgcaatccacaactgaactaccatcnnnnnnnctaatatggacttcttcggaaaaattgaacaataatcaaaacaccgttttaa 645  Q
    |||||| |||||||||||||||||||||||||||||         ||| || || ||||||| |||||||||||||||| ||||||| | ||||||    
T  4091888 tactaaaccttctgcaatccacaactgaactaccatttttttctttaagattgaattcttcgaaaaaattgaacaataagcaaaacatccttttaa 4091983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 633
Target Start/End: Complemental strand, 4130448 - 4130365
Alignment:
Q  550 tactaagccttctgcaatccacaactgaactaccatcnnnnnnnctaatatggacttcttcggaaaaattgaacaataatcaaa 633  Q
    |||||||||||||||||||||||| |||||||||||        |||  || || |||||||||||||||||||||||| ||||    
T  4130448 tactaagccttctgcaatccacaattgaactaccatttttttctctatgattgagttcttcggaaaaattgaacaataagcaaa 4130365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 778 - 816
Target Start/End: Complemental strand, 5052168 - 5052130
Alignment:
Q  778 tactgcagctaatggtaatccatcacacttttttgcaat 816  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  5052168 tactgcagctaatggtaatccatcacacttttctgcaat 5052130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 25849805 - 25849868
Alignment:
Q  48 agtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||||    |||||||||| | ||||||| |||||||||||| ||||||||||||    
T  25849805 agtgtggtggtgtgttgt----cgtcttgtgcagcgttgttttatttcccgtcttcttgcggtgttca 25849868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 673
Target Start/End: Original strand, 911304 - 911377
Alignment:
Q  600 tggacttcttcggaaaaattgaacaataatcaaaacaccgttttaacagagctgaaagaaaatcatagctcaat 673  Q
    |||| ||||| ||||| |||||||||||| ||||||| ||||||||  |||||| |||| ||| ||||||||||    
T  911304 tggagttctttggaaatattgaacaataagcaaaacatcgttttaagggagctggaagataatgatagctcaat 911377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 759 - 816
Target Start/End: Complemental strand, 2919815 - 2919758
Alignment:
Q  759 gaagaaaagccccaagtgctactgcagctaatggtaatccatcacacttttttgcaat 816  Q
    |||||| |||||||| || || |||||||||||||||||| ||||| |||||||||||    
T  2919815 gaagaagagccccaactgatattgcagctaatggtaatccgtcacatttttttgcaat 2919758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 5052652 - 5052607
Alignment:
Q  329 acaacttatcaaattcattaaatgaatcatatagccctctattgta 374  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||    
T  5052652 acaatttatcaaatttattaaatgagtcatatagccctctattgta 5052607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 10100445 - 10100482
Alignment:
Q  150 taactgaaaaatacgttttatttttatcgtcagcgcga 187  Q
    |||||||||||||||||||||||||||| |||||||||    
T  10100445 taactgaaaaatacgttttatttttatcttcagcgcga 10100482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 11490495 - 11490540
Alignment:
Q  329 acaacttatcaaattcattaaatgaatcatatagccctctattgta 374  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||    
T  11490495 acaatttatcaaatttattaaatgagtcatatagccctctattgta 11490540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 51923677 - 51923742
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||||||||| ||| ||||||  | ||||||||||||| |||||||||| ||| ||||||||    
T  51923677 ttcgtgatttcgtcgtcttagtgtgacgttgtgttgttcgtcatcttgtgcggcgttatttgattt 51923742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 14464476 - 14464568
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| || ||| ||||||||| | |||  ||| |||| | |||||| ||||||| ||||||||||||  |||||||||||    
T  14464476 tttttctttgtgatttcatcttctaagtgtggtgatttgtcattcatcgtttcgtgcggcgttgtttaatttcccgtcttcgtgcggtgttca 14464568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 25842659 - 25842715
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||| || |||| |||||| |||||||||||| |||||||||| |||||||    
T  25842659 tgtgttgttcatcatcttctgcggtattgtttgatttctcgtcttgttgtggtgttc 25842715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 45882734 - 45882659
Alignment:
Q  230 cttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctc-cagatttctgattttaagttaactctcaca 305  Q
    ||||||| |||||||| || || |||||||||||||||||||| |  |||||  |||||||||||||||||||||||    
T  45882734 cttcaaccatcgtggcacgttgtttctccatcgtggcacgatttttgcagatc-ctgattttaagttaactctcaca 45882659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 50611525 - 50611434
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| |||||| |||| | |||||||||||||| ||||| | ||||| |||| ||||| |  |||||||||||    
T  50611525 tttttctttgtgatttcatcatctaagtgtgatggtttattgttcgtcgtcttatgcggcg-tgtttcattttccgtcctcgtgcggtgttca 50611434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 4019685 - 4019752
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtc-ttgtgcggtgttgttt 89  Q
    |||||||||||||||||||| ||| |||| |  | |||||||||||||||| |||||||| |||||||    
T  4019685 tttttcttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttt 4019752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 725 - 816
Target Start/End: Original strand, 4092066 - 4092157
Alignment:
Q  725 acataattccagtcattttgggaccatttggagcgaagaaaagccccaagtgctactgcagctaatggtaatccatcacacttttttgcaat 816  Q
    |||| |||||| | || ||| ||| |||||| |||||||| | ||| |||||||| |||||||||| |||  |||||||||||||| |||||    
T  4092066 acatcattccaataatcttgtgacaatttggtgcgaagaagacccctaagtgctattgcagctaatcgtatcccatcacactttttggcaat 4092157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 9998427 - 9998505
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    |||||||||| ||| |||| ||||||||    
T  9998427 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgttttgtcgcggtgtt 9998505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 10108196 - 10108274
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    |||||||||| ||| |||| ||||||||    
T  10108196 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgttttgtcgcggtgtt 10108274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 10233030 - 10233108
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    |||||||||| ||| |||| ||||||||    
T  10233030 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgttttgtcgcggtgtt 10233108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 30293576 - 30293529
Alignment:
Q  59 gtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    |||||||||||||||||| ||| ||||||||||||| || ||||||||    
T  30293576 gtgttgttcgtcgtcttgcgcgatgttgtttgattttccatcttgttg 30293529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 16235376 - 16235442
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||||| || ||| |||| |  | ||||||||||| |||||||||||| |||||||||||||    
T  16235376 ttcgtgatttcatcgtcttagtgcgacgttgtgttgttcgccgtcttgtgcggcgttgtttgatttc 16235442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 25388668 - 25388618
Alignment:
Q  255 ctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||| ||||||||| ||||   |||||||||||||||||||||||    
T  25388668 ctccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 25388618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 47980770 - 47980708
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttg 86  Q
    |||| ||||||||||||||||  || ||||||||| |||||||| ||||||| ||||| ||||    
T  47980770 ttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgttg 47980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 47990057 - 47989995
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttg 86  Q
    |||| ||||||||||||||||  || ||||||||| |||||||| ||||||| ||||| ||||    
T  47990057 ttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgttg 47989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 47999344 - 47999282
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttg 86  Q
    |||| ||||||||||||||||  || ||||||||| |||||||| ||||||| ||||| ||||    
T  47999344 ttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgttg 47999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 48008631 - 48008569
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttg 86  Q
    |||| ||||||||||||||||  || ||||||||| |||||||| ||||||| ||||| ||||    
T  48008631 ttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgttg 48008569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 773 - 810
Target Start/End: Complemental strand, 3885687 - 3885650
Alignment:
Q  773 agtgctactgcagctaatggtaatccatcacacttttt 810  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  3885687 agtgctactgcagctattggtaagccatcacacttttt 3885650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 751 - 812
Target Start/End: Original strand, 4079964 - 4080025
Alignment:
Q  751 tttggagcgaagaaaagccccaagtgctactgcagctaatggtaatccatcacacttttttg 812  Q
    ||||| |||||||| | |||| | ||||| ||||||||||||||| |||||||| |||||||    
T  4079964 tttggtgcgaagaagaccccctattgctattgcagctaatggtaaaccatcacatttttttg 4080025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 259 - 304
Target Start/End: Complemental strand, 5191419 - 5191374
Alignment:
Q  259 atcgtggcacgattctccagatttctgattttaagttaactctcac 304  Q
    |||||| ||||||||| ||||  |||||||||||||||||||||||    
T  5191419 atcgtgccacgattctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #129
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 5858424 - 5858379
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  5858424 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 5858379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #130
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 8914662 - 8914727
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||||||||| ||| |||| |    |||||||||||||||||||||||| | ||||||||||    
T  8914662 ttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgctgtttgattt 8914727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #131
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 783 - 816
Target Start/End: Original strand, 11490984 - 11491017
Alignment:
Q  783 cagctaatggtaatccatcacacttttttgcaat 816  Q
    |||||||||||||||||||||| |||||||||||    
T  11490984 cagctaatggtaatccatcacatttttttgcaat 11491017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #132
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 20465098 - 20465018
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||| |||| |||| |||||||||||||||||||| |||    |||||||||  |||||||| ||||||||||    
T  20465098 gtgatttcatcgtctaagtgaggtgttgtgttgttcgtcgtcttgtacgg---cgtttgattttgcgtcttgtcgcggtgttca 20465018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #133
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 38545785 - 38545837
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||||||||||||    |||||||||| |||||||| ||||||||    
T  38545785 tgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgtcttgtcgcggtgtt 38545837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #134
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 40556672 - 40556721
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  40556672 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 40556721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #135
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 42460729 - 42460766
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  42460729 tgtgttgttcatcgtcttgtgcggcgttgtttgatttc 42460766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #136
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 52923243 - 52923167
Alignment:
Q  34 gatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||| ||| ||| ||||||| | ||||||||||||||||||||||||    |||||||||| ||| |||| ||||||||    
T  52923243 gattttgtcgtctaagtgtggcgctgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgttttgtcgcggtgtt 52923167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #137
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 54188386 - 54188341
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  54188386 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 54188341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 2e-73; HSPs: 98)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 22712878 - 22713026
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22712878 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 22712977  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22712978 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 22713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 157 - 305
Target Start/End: Complemental strand, 30478814 - 30478666
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    |||| |||||||||||||||| ||||||   ||||| || ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  30478814 aaaacacgttttatttttatcttcagcgatgccatcgtgccacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttct 30478715  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30478714 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 30478666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 157 - 305
Target Start/End: Complemental strand, 17943358 - 17943210
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcc-caggaatcttgcttcaacaatcgtggcgcgatgcttc 255  Q
    ||||||||||||||||||||| ||| | ||||||||||||||||||| ||||||||||| || || || |||| ||||||||||||||||||||||||||    
T  17943358 aaaatacgttttatttttatcttcaacacgaccatcatggcacgaaaattccagtagctgcctcatga-tcttacttcaacaatcgtggcgcgatgcttc 17943260  T
Q  256 tccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17943259 tccatcgtggcacgattctccagatttctgattttaagttaactctcaca 17943210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 27518003 - 27518151
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    |||||||||||||    |||| |||||||| ||||| |||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  27518003 aaaatacgttttaaaaatatcttcagcgcgtccatcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaaaaatcgtggcgcgatgcttct 27518102  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  27518103 ccatcgtggcacgattctccagaattttgattttaagttaactctcaca 27518151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 33674820 - 33674938
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  33674820 catcgtggcacgatttttccagtagcttcccaggaatcttacttcaacaatcgtggcgcgatacttctccatcgtggcacgattctctagatttctgatt 33674919  T
Q  289 ttaagttaactctcacagg 307  Q
    |||||||||||||||||||    
T  33674920 ttaagttaactctcacagg 33674938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 12781643 - 12781752
Alignment:
Q  197 cacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagtta 296  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12781643 cacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattatccagatttctgattttaagtta 12781742  T
Q  297 actctcacag 306  Q
    ||||||||||    
T  12781743 actctcacag 12781752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 39679814 - 39679697
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||  ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39679814 catcgtggcacgaaaaatccagtatcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 39679715  T
Q  289 ttaagttaactctcacag 306  Q
    ||||||||||||||||||    
T  39679714 ttaagttaactctcacag 39679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 22717640 - 22717756
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  22717640 catcgtggcacgatttttccagtagtttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgatacttcagatttctgatt 22717739  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  22717740 ttaagttaactctcaca 22717756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 35894623 - 35894771
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| ||||||   ||||| |||||||||| ||||||||||| ||   |||||||||||||||||||||||||||||||||||    
T  35894623 aaaatacgttttatttttatcttcagcgatgccatcgtggcacgaaaattccagtagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttct 35894722  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||| | || |||||||||| |||||||||||||||||||||||||    
T  35894723 ccatcgtagtacaattctccagaattctgattttaagttaactctcaca 35894771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 2735974 - 2735858
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||  ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2735974 catcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 2735875  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  2735874 ttaagttaactctcaca 2735858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 39686752 - 39686636
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||  ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39686752 catcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 39686653  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  39686652 ttaagttaactctcaca 39686636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 45567178 - 45567062
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45567178 catcgtggcacgaaatttccagtgtctgcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 45567079  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||| ||||||    
T  45567078 ttaagttaacgctcaca 45567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 17462204 - 17462088
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  ||  ||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17462204 catcgtggcacgaaatttccagtgtctgaccaggaatcttgcttcatccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 17462105  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  17462104 ttaagttaactctcaca 17462088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 2740710 - 2740594
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||| |||  ||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2740710 catcgtggcacaaaaaatccagtgtcttcccaagaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 2740611  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  2740610 ttaagttaactctcaca 2740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 20050438 - 20050554
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||| ||||||||||||||   |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||    
T  20050438 catcgtggcacgaaaattccagtagcttcctcagaatcttgctgcaacaatcgtggcacgatgcttctccatcgtggcacgattctccagaattttgatt 20050537  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  20050538 ttaagttaactctcaca 20050554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 20055184 - 20055300
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||| |||| ||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||    
T  20055184 catcgtggcatgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggcatgattctccagaattctgatt 20055283  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  20055284 ttaagttaactctcaca 20055300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 459382 - 459290
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||  |||||||||||| ||||||||||||||||||||    
T  459382 tttttcttcgtgatttcgtcatctgagtgtcgtggtgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttca 459290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 4192806 - 4192903
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  4192806 taggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgtggtgttgtttgatttcccgtcttcttgcagtgttca 4192903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 17319290 - 17319386
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | |||| ||||||| ||||||||||||||||||||    
T  17319290 taggttttttcttcatgatttcgtcatctgagtgtggtggtgtgttgttcttcgtcttgtgcagcgttg-ttgattttccgtcttgttgcggtgttca 17319386  T

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Target: chr2; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 41431001 - 41431093
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  41431001 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttca 41431093  T

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Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 8805834 - 8805931
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||  || ||||||||    
T  8805834 taggttttttctttgtgatttcatcatctgagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttca 8805931  T

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Target: chr2; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 22421703 - 22421800
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||| ||||||||||||    
T  22421703 taggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgcgcggtgttgtttgatttcccatcttcttgcggtgttca 22421800  T

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Target: chr2; HSP #23
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 9986450 - 9986358
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  9986450 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttca 9986358  T

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Target: chr2; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 9374666 - 9374572
Alignment:
Q  21 gatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||   ||||||| ||| ||||||||||| ||||||||    
T  9374666 gatttttcttcgtgatttcgtcatcttattgtggtggtgtgttgttcgtcatcttgtgcgtcattgtttgtttttccgtcttgttgtggtgttca 9374572  T

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Target: chr2; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 7015824 - 7015727
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||| | |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  7015824 taggttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttca 7015727  T

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Target: chr2; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 12648055 - 12647970
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||| || ||| |||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  12648055 ttcgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgttc 12647970  T

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Target: chr2; HSP #27
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 32913209 - 32913306
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| | |||||||||| ||||||| || |||||||||    
T  32913209 taggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttacggtgttca 32913306  T

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Target: chr2; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 2808580 - 2808488
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||| || ||||| ||||||    
T  2808580 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttgcgatgttca 2808488  T

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Target: chr2; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 4228106 - 4228198
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| |||||| |||| |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  4228106 tttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttca 4228198  T

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Target: chr2; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 45128177 - 45128269
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| |||| | |||| ||||||||||||    
T  45128177 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttctcatcttcttgcggtgttca 45128269  T

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Target: chr2; HSP #31
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 40660040 - 40659961
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| |||||||| |||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  40660040 tttttctttgtgatttcatcatctaagtgtggtgctttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctt 40659961  T

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Target: chr2; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 37614235 - 37614141
Alignment:
Q  22 atttttcttcgtgatttcgtcatct-gagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||| |||| |||||||||| |||||||||| ||||||||||||  |||||||||||| ||||||||||||||||||||    
T  37614235 atttgtcttcgtggtttcgtaatcttgagtgtggtgatgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttca 37614141  T

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Target: chr2; HSP #33
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 40626136 - 40626066
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatt 93  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  40626136 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatt 40626066  T

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Target: chr2; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 32197908 - 32197811
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| ||||||||||||||| |||||||| ||||||||  | |||||||| ||||  ||||||||||||| ||||||||||||||||||    
T  32197908 taggttttttctttgtgatttcgtcatctaagtgtggtagtgtgttgcccatcgtcttgcgcggcattgtttgatttcctgtcttgttgcggtgttca 32197811  T

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Target: chr2; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 37171202 - 37171283
Alignment:
Q  224 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||| |||||||||| |||| || |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  37171202 atcttgtttcaacaatcatggcacgttgcttctccatcgtggcacgtttctccagattccttattttaagttaactctcaca 37171283  T

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Target: chr2; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 38190730 - 38190649
Alignment:
Q  224 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||| ||||||||||||||| || |||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||    
T  38190730 atcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacgtttctccatattcctgattttaaattaactctcaca 38190649  T

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Target: chr2; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 20047190 - 20047098
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||| | |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||  ||||| || |||||||||    
T  20047190 tttttcattgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttca 20047098  T

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Target: chr2; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 30420651 - 30420743
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  30420651 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttca 30420743  T

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Target: chr2; HSP #39
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 36233981 - 36234073
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | | |||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  36233981 tttttctttgtaatttcatcatctaagtgtggtgattttttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 36234073  T

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Target: chr2; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 8971740 - 8971643
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||| ||||||| |||||||||||||||||||| | ||||||||||||||| ||||  |||| ||||||    
T  8971740 taggttttttctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccatcttcgtgcgatgttca 8971643  T

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Target: chr2; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 26025523 - 26025426
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||| | |||||||| || ||||| |||||||||||||||| ||||||||||||  |||||| ||||||||||||    
T  26025523 taggttttttctttgtgatttcatcatgtaagtgtggtagtttgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttca 26025426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 27949410 - 27949491
Alignment:
Q  34 gatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||| |||||| ||||||||||| | |||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||    
T  27949410 gatttcatcatctaagtgtggtggtttattgttcgtcgtcttgtacggcgttgtttgatttcccgtcttcttgcgatgttca 27949491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 31580686 - 31580605
Alignment:
Q  34 gatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||||| ||  |||||||||||    
T  31580686 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttca 31580605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 17932451 - 17932356
Alignment:
Q  160 atacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcc-caggaatcttgcttcaacaatcgtggcgcgatgcttc 255  Q
    |||||||||||||||||| ||| |||||||||| |||||||||| ||||||||||| || |||| |||||| ||||||||||||||| |||| ||||    
T  17932451 atacgttttatttttatcttcaacgcgaccatcgtggcacgaaaattccagtagctgcctcagg-atcttgtttcaacaatcgtggcacgattcttc 17932356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 27249239 - 27249167
Alignment:
Q  43 atctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  27249239 atctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 27249167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 34598960 - 34599052
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| || |||||||| |||||| ||||||||||| |||||||| ||||||||||||| |||||||||||| || ||||  |||||||||||    
T  34598960 tttttttttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttca 34599052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 39641966 - 39641874
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||| |||||||| ||| |||||   ||||||||| |||||||||   ||||||||||||||||||||||||||| ||||    
T  39641966 tttttcttcgtgatttcatcatctgaatgttgtggtagtttgttcgtcatcttgtgcgtcattgtttgatttcccgtcttgttgcggtattca 39641874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 10929624 - 10929715
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttg-tttgatttcccgtcttgttgcggtgttc 114  Q
    |||| |||||||||||||| |||||||| |||| |||||||||||||||||||| ||  |||| ||||||||  ||||||||||||||||||    
T  10929624 tttttttcgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttc 10929715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 25087020 - 25087103
Alignment:
Q  33 tgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttcaa 116  Q
    ||||||| |||||| ||||||||||| |||||||||||||||||||||  |||||||| |||||| |||| |||| ||||||||    
T  25087020 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgctttcccttcttcttgcagtgttcaa 25087103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 3270342 - 3270245
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||| || |||||||| |||||| ||||||||||  ||||||||||||| ||||| || |||||||||||| |||||||  |||||||||||    
T  3270342 taggttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttca 3270245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 5377868 - 5377948
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctca 303  Q
    |||| ||||||||||||||||| | |||   ||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  5377868 gaattttgcttcaacaatcgtgacacgaaa-ttctccatcgtagcacgattctccagaattctgattttaagttaactctca 5377948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 8308140 - 8308216
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||| |||||||||||||||||||||||||| |||||  | ||||||||||||||||||||| | |||||||||||||    
T  8308140 taggttttttcttcgtgatttcgtcatctgactgtgg-cgcgtgttgttcgtcgtcttgtgcagcgttgtttgatttc 8308216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 10248119 - 10248212
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttcaa 116  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| | |||||| |  || ||| ||| ||||||||| || |||||||||||||    
T  10248119 tttttcttcgtgacttcgtcatctgagtgtggcggtgtgttgtttgccgtcttatatggcgtttttttatttcccgttttattgcggtgttcaa 10248212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 3269219 - 3269127
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| || |||||||| |||||| ||||||||||  ||||||||||||| ||||| || |||||||||||| |||||||  |||||||||||    
T  3269219 tttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttca 3269127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 3269778 - 3269686
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| || |||||||| |||||| ||||||||||  ||||||||||||| ||||| || |||||||||||| |||||||  |||||||||||    
T  3269778 tttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttca 3269686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 6173605 - 6173697
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||  ||||||||||| |||||||||| |||||||| || |||||||||||| || ||||  |||||||||||    
T  6173605 tttttctttgtgatttcatcatcgaagtgtggtggtttgttgttcgttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttca 6173697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 21570515 - 21570423
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| || |||||||| |||||| ||||||||||| ||||||||||||||||||| |  |||||||  ||||||||||| | ||||||||||    
T  21570515 tttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgtgacgttgtttagtttcccgtcttctcgcggtgttca 21570423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 3725153 - 3725232
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| |||||||| || ||| ||||||||||| |||||||||| ||||||| ||| ||||||||||||| ||||||    
T  3725153 tttttctttgtgatttcatcgtctaagtgtggtggtttgttgttcgttgtcttgtacggcgttgtttgatttctcgtctt 3725232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 34128826 - 34128735
Alignment:
Q  22 atttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||| ||||| |||||||| |||||||| |||| | |||||||||||||||||||||  |||||||||||   |||||||||| ||||||    
T  34128826 attttttttcgttatttcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtt 34128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 45280457 - 45280504
Alignment:
Q  259 atcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45280457 atcgtggcacgattctccagaattctgattttaagttaactctcacag 45280504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 6359008 - 6358931
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    |||||||||| ||| ||||||||||  | |||||||||||||||||||||| | ||||||||||||| | ||||||||    
T  6359008 ttcgtgattttgtcgtctgagtgtgtcgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttg 6358931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 259 - 304
Target Start/End: Complemental strand, 17932373 - 17932328
Alignment:
Q  259 atcgtggcacgattctccagatttctgattttaagttaactctcac 304  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  17932373 atcgtggcacgattcttcagatttctgattttaagttaactctcac 17932328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 113
Target Start/End: Complemental strand, 29574763 - 29574679
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||||||||| || ||||| || | ||||||||||||||||||||||||  |||||||||||| | | ||||||| |||||    
T  29574763 ttcgtgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtt 29574679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 43397251 - 43397169
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||| ||| ||||||| | ||||||||||||||||||||   |||  |||||||||| |||||||| |||||||||    
T  43397251 ttcgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgt---gtggcgtttgatttcgcgtcttgtcgcggtgttc 43397169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 17462264 - 17462222
Alignment:
Q  150 taactgaaaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  17462264 taactgaaaaatacgttttatttttatcttcagcgcgaccatc 17462222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 4264443 - 4264523
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||| || ||||| | || || |||||||||||||||||||||   ||||||||||| |||||| ||||||||||||    
T  4264443 gtgatttcgtcgtcggagtgagatgttgcgttgttcgtcgtcttgtgcgg---tgtttgatttcgcgtcttattgcggtgttca 4264523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 32448724 - 32448668
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||||||||||||  ||||||||||||  | ||||||||||||||||    
T  32448724 tgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttc 32448668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 8893245 - 8893187
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttg 90  Q
    ||||||||||||| ||||||| | | |||||||||||||||||| ||||||||| ||||    
T  8893245 gtgatttcgtcatttgagtgttgcgttgtgttgttcgtcgtcttatgcggtgttatttg 8893187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 32680689 - 32680640
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgt 72  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||    
T  32680689 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 32680640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 37416675 - 37416752
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    |||||||||  ||| ||| ||||  ||| |||||||||||||||||||||||  ||||||||||||| | ||||||||    
T  37416675 ttcgtgattctgtcgtctaagtgccgtgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttg 37416752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 41694618 - 41694671
Alignment:
Q  60 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||| |||||||||| ||||||||||| ||||| | |||||||||||||||    
T  41694618 tgttgtttgtcgtcttgtacggtgttgtttaatttcgcctcttgttgcggtgtt 41694671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 11189700 - 11189652
Alignment:
Q  67 cgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||| || |||||||||||| |||||||||| ||||||||    
T  11189700 cgtcgtcttgtgcagtattgtttgatttctcgtcttgttgtggtgttca 11189652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 24587681 - 24587773
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||| |||||||||  |||||||| ||   |||| | ||||||||||||||  | |||| |||||||| ||| |||||||||||||||    
T  24587681 tttttcttcatgatttcgttgtctgagtgcggcaatgtgatattcgtcgtcttgtgtagcgttgattgatttctcgtattgttgcggtgttca 24587773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 28534060 - 28534004
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||| |||||||||||  |||||||||||||   ||||||||||||||||    
T  28534060 tgtgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttc 28534004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 33674767 - 33674811
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacga 201  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||    
T  33674767 aaaatacgttttatttttatctacagcgcgaccatcgtggcacga 33674811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 36943259 - 36943172
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||| || ||||||||||| ||| |||| || | ||||||||||||||||||||||||    |||||||||| ||| |||| ||||||||    
T  36943259 tttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgtattgtcgcggtgtt 36943172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 37994242 - 37994330
Alignment:
Q  27 tcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||  |||||||| || | ||||||||||||| || ||| |||  |||||||||||  | ||||||||| |||||||    
T  37994242 tcttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttca 37994330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 38293522 - 38293606
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgc 107  Q
    ||||||||||||||||| || |  |||||  ||| | ||||||||||||||||||| |  |||||||||| ||||||||| ||||    
T  38293522 tttttcttcgtgatttcttcgtacgagtgcagtgttatgttgttcgtcgtcttgtgtgacgttgtttgatatcccgtcttattgc 38293606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 41712873 - 41712821
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtctt 75  Q
    |||||||  |||||||| |||||| ||||||||||| ||||||||||||||||    
T  41712873 tttttctctgtgatttcctcatctaagtgtggtggtttgttgttcgtcgtctt 41712821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 45567232 - 45567196
Alignment:
Q  156 aaaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    |||||||||||||||||||||| ||||||||||||||    
T  45567232 aaaaatacgttttatttttatcttcagcgcgaccatc 45567196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 1421647 - 1421725
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| |||| | |||||||||||||||||||| |    |||||||||| |||||||| ||||||||    
T  1421647 gtgatttcgtcgtctaagtgcggtgttatgttgttcgtcgtcttgtgcag---cgtttgatttcgcgtcttgtcgcggtgtt 1421725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 2736027 - 2735992
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  2736027 aaaatacgttttatttttatcttcagcgcgaccatc 2735992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 2740763 - 2740728
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  2740763 aaaatacgttttatttttatcttcagcgcgaccatc 2740728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 17249252 - 17249197
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||||||||||||||||||| || |||| ||||  | |||||||||||||||    
T  17249252 tgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgtt 17249197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 30923571 - 30923497
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgc 107  Q
    ||||||||||| |||| |||||| | ||||||||  |||||||||||||| ||| |||||||||  ||||||||||    
T  30923571 gtgatttcgtcgtctgggtgtggcgctgtgttgtatgtcgtcttgtgcggcgtt-tttgatttcttgtcttgttgc 30923497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 39310981 - 39310934
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgc 79  Q
    |||||||| |||||| ||||||||| |||||||||| |||||||||||    
T  39310981 gtgatttcatcatctaagtgtggtgttgtgttgttcttcgtcttgtgc 39310934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 39679867 - 39679832
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  39679867 aaaatacgttttatttttatcttcagcgcgaccatc 39679832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 39686805 - 39686770
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  39686805 aaaatacgttttatttttatcttcagcgcgaccatc 39686770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 10237355 - 10237289
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | |||||||||||||||||||||| | ||| |||||||||    
T  10237355 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcagcgttctttgatttc 10237289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 18113890 - 18113932
Alignment:
Q  71 gtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||    
T  18113890 gtcttgtgcggcgttgtttgattttccgtcttattgcggtgtt 18113932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 3308906 - 3308971
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||||||||| ||| |||| |  | |||||| || |||||||||||||| ||||||||||||    
T  3308906 ttcgtgatttcgtcgtcttagtgcgacgttgtgttatttgtcgtcttgtgcggcgttgtttgattt 3308971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 7678002 - 7677953
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  7678002 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 7677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 12781524 - 12781569
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  12781524 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 12781569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 17943416 - 17943371
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  17943416 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 17943371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 18763439 - 18763488
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    |||||||| || ||| |||| |||| ||||||||||||||||||||||||    
T  18763439 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgg 18763488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 20050326 - 20050371
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  20050326 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 20050371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 20055069 - 20055114
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  20055069 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 20055114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 28227786 - 28227737
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgc 107  Q
    |||| ||||||||||||||||||  |||||| |||||| |||||||||||    
T  28227786 tgtgctgttcgtcgtcttgtgcgacgttgttagatttctcgtcttgttgc 28227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 133; Significance: 1e-68; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 17348 - 17496
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17348 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 17447  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    | ||||||||||||| |||||||||||||||||||||||||||||||||    
T  17448 ctatcgtggcacgatactccagatttctgattttaagttaactctcaca 17496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 2e-66; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 157 - 305
Target Start/End: Complemental strand, 590614 - 590466
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  590614 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 590515  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
      ||||||||||||| |||||||||||||||||||||||||||||||||    
T  590514 ttatcgtggcacgatactccagatttctgattttaagttaactctcaca 590466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 157 - 306
Target Start/End: Original strand, 16757628 - 16757777
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  16757628 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcctct 16757727  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16757728 ccatcgtggcacgatgctccagatttctgattttaagttaactctcacag 16757777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 4812902 - 4813018
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4812902 catcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 4813001  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  4813002 ttaagttaactctcaca 4813018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 25684412 - 25684296
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25684412 catcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 25684313  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  25684312 ttaagttaactctcaca 25684296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 188 - 305
Target Start/End: Original strand, 29555200 - 29555317
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    ||||| |||||||||||||||| ||||| ||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29555200 ccatcgtggcacgaaatttccaatagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtagcacgattctccagatttctgat 29555299  T
Q  288 tttaagttaactctcaca 305  Q
    ||||||||||||||||||    
T  29555300 tttaagttaactctcaca 29555317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 9021522 - 9021638
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||| ||||||||||||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9021522 catcgtggcacgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtgacgcgatgcttctccatcgtggcacgattctccagaattctgatt 9021621  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  9021622 ttaagttaactctcaca 9021638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 28327677 - 28327560
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||  ||||||  ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28327677 catcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcagccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 28327578  T
Q  289 ttaagttaactctcacag 306  Q
    ||||||||||||||||||    
T  28327577 ttaagttaactctcacag 28327560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 16752936 - 16753052
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  16752936 catcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcctctctatcgtggcacgatgctccagatttctgatt 16753035  T
Q  289 ttaagttaactctcaca 305  Q
    ||||||||| |||||||    
T  16753036 ttaagttaagtctcaca 16753052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 28332400 - 28332284
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||  ||||||  ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28332400 catcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcagccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 28332301  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  28332300 ttaagttaactctcaca 28332284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 381 - 584
Target Start/End: Complemental strand, 18388694 - 18388495
Alignment:
Q  381 cctgttaccatacgaagatgaaaattttgtagctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatc 480  Q
    |||| ||| ||| ||||||||||  ||||||||||||||||| | || || |||||||||||| ||| ||| | |||||||||| |||  ||||||||||    
T  18388694 cctgatacaatatgaagatgaaacctttgtagctaaatcatgaacgaggtcatgcatttcaaagtttgcttccccatcaccaattgattgttgatgtatc 18388595  T
Q  481 aacgaccttgacacaagtacatcaattaaagtatgcttctccaactttttcctgatctgtggacgattctactaagccttctgcaatccacaactgaact 580  Q
    || ||||||||||| ||| ||||||    ||||| ||||| | ||||||||||| |||| | ||||||||| ||||||||||||||||||||||||||||    
T  18388594 aaagaccttgacactagttcatcaa----agtattcttctgcgactttttcctggtctgcgaacgattctaataagccttctgcaatccacaactgaact 18388499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 28895269 - 28895153
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | || | |||    
T  28895269 catcgtggcacgatttttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctacatcgtggcacgattctccaaaatttttatt 28895170  T
Q  289 ttaagttaactctcaca 305  Q
    ||||||||| |||||||    
T  28895169 ttaagttaagtctcaca 28895153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 15046870 - 15046960
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||    
T  15046870 tttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgctgtttgatttcctgtcttggtgcgatgtt 15046960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 43192459 - 43192362
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||| ||| ||||||||    
T  43192459 taggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgtggtgttca 43192362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 3276035 - 3275955
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctc 302  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3276035 gaatcttgcttcaacaatcgtggcacattgcttctccatcgtggcacgtttctccagatttctgattttaagttaactctc 3275955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 35580428 - 35580524
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||  |||||||||||| ||||||| |||||||||||    
T  35580428 taggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttc 35580524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 11196860 - 11196957
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||  ||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  11196860 taggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttca 11196957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 5333391 - 5333471
Alignment:
Q  34 gatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  5333391 gatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttc 5333471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 33896058 - 33896150
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||    
T  33896058 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcttcttgtgcggcgttgtttgttttcccgtcttcttgcggtgttca 33896150  T

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Target: chr8; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 44100041 - 44099950
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||  |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  44100041 tttttctttgtgattta-tcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttca 44099950  T

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Target: chr8; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 21033599 - 21033520
Alignment:
Q  226 cttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  21033599 cttgcttcaacaatcgtggcacgttgcttctccatcgtggcacgattctccagtttttagattttaagttaactctcaca 21033520  T

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Target: chr8; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 23180008 - 23180091
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||| |||||||||| | || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  23180008 gaatcttgtttcaacaatcatagcacgatgcttctccatcgtagcacgattctccagattcctgattttaagttaactctcaca 23180091  T

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Target: chr8; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 33342408 - 33342503
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||| ||||||||||||||||||||| |  |||||||||||||||||||| ||||||| ||||| ||| ||||||||||||| |||||||||||||    
T  33342408 taggttttttcttcgtgatttcgtcacccaagtgtggtggtgtgttgttcttcgtcttatgcggcgttttttgatttcccgtattgttgcggtgtt 33342503  T

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Target: chr8; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 39153250 - 39153168
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgtt 105  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | |||||| |||||| |||||||||    
T  39153250 tttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtcgcgttgttcgatttcgcgtcttgtt 39153168  T

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Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 19876187 - 19876279
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||| ||||| |||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  19876187 tttttctttgtgatttcatcatctaagtgtagtggtttgttgttcgtcgtcttgtgcggcgttgtttgattccccgtcttcttgtggtgttca 19876279  T

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Target: chr8; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 29777195 - 29777287
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||   ||||||| ||||||||||| ||||||||||||    
T  29777195 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacattgtttgctttcccgtcttcttgcggtgttca 29777287  T

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Target: chr8; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 34611780 - 34611872
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||||| |  |||||||||||    
T  34611780 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcggtgttca 34611872  T

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Target: chr8; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 28239820 - 28239901
Alignment:
Q  34 gatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||    
T  28239820 gatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttca 28239901  T

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Target: chr8; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 2655846 - 2655938
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||| | ||||||||||||||||||||  |||||||||||    
T  2655846 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttca 2655938  T

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Target: chr8; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 4808940 - 4809032
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  4808940 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttca 4809032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 9072694 - 9072786
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||| || |||||||||| |||||||| |||||| |||| ||||||||||||    
T  9072694 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcttcatcttgtgcggcgttgtttgctttcccatcttcttgcggtgttca 9072786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 27747221 - 27747129
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||| |||||||||    |||||||||||| || |||||||||||||||    
T  27747221 tttttcttcgtgatttcaccatctgggtgtggtggtgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttca 27747129  T

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Target: chr8; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 33298840 - 33298923
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||  ||| | |||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||||||    
T  33298840 gtgatttcgtcatccaagtctagtggtgtgttgttcatcgtcttgtgtggtgttgtttgatttctcgtcttgctgcggtgttca 33298923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 8443639 - 8443558
Alignment:
Q  33 tgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||| ||| |||| |||| |||||||||||||||||||||||| ||||||||||| | ||||||||||| ||||||    
T  8443639 tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttc 8443558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 15597280 - 15597183
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||| ||||||||||||| |||||| ||||||||||||| ||||||||||| ||  ||| ||||||| |||| ||||| |||||||||    
T  15597280 taggttttttcttcatgatttcgtcatccgagtgtagtggtgtgttgtttgtcgtcttgtgaggccttggttgattttccgttttgttacggtgttca 15597183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 9498707 - 9498615
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||| |||||||||||  |||||||||||||||||||  |||||||||||    
T  9498707 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgttgtcttgtgcggctttgtttgatttcccgtcttcgtgcggtgttca 9498615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 9619453 - 9619373
Alignment:
Q  35 atttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| ||||||  |||||||| | |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  9619453 atttcatcatctacgtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 9619373  T

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Target: chr8; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 11464147 - 11464239
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| |||||||||||||  |||||  |||||||||||    
T  11464147 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttca 11464239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 16794268 - 16794360
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||| ||||| ||| |||||| | ||||||||||||||||||||   || |||||||||||||| ||||| |||||||||    
T  16794268 tttttcttcgtgatttcatcatccgagagtggtgttatgttgttcgtcgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttca 16794360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 32724589 - 32724497
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||  ||||||| |||||| | ||||||||| |||||||||||||||||||||| |||||||||||||| |||||  ||| |||||||    
T  32724589 tttttctttatgatttcatcatctaactgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttccagtcttcgtgcagtgttca 32724497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 22685122 - 22685197
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaa 297  Q
    |||| ||| ||||||||||||||| ||| |||||| ||||||||||||||||| |||| |||||||||||||||||    
T  22685122 gaattttggttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaattctgattttaagttaa 22685197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 42448133 - 42448043
Alignment:
Q  25 tttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||| |||||||| |||||| ||||||| ||| ||||||||||||||||||||||  |||||||||||  ||||||  |||||||||||    
T  42448133 tttctttgtgatttcatcatctaagtgtggaggtttgttgttcgtcgtcttgtgcggcattgtttgatttttcgtcttcgtgcggtgttca 42448043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 11725652 - 11725749
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||  ||||||| |||||| ||||||||||| |||||||| ||||||||||||   |||||||||||||| | || ||||||||||||    
T  11725652 taggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcgacattgtttgatttcccattttcttgcggtgttca 11725749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 24099390 - 24099301
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||| |||||||| |  | |||||||||||||||| ||| | | ||||||||||||| | |||||||||||||||||    
T  24099390 ttcttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttca 24099301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 29617382 - 29617321
Alignment:
Q  53 ggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  29617382 ggtgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttc 29617321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 44578012 - 44578091
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| || ||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||| || |||| ||||    
T  44578012 tttttctttgtaatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttcatctcccatctt 44578091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 36532899 - 36532945
Alignment:
Q  49 gtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  36532899 gtgtggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 36532945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 3673404 - 3673483
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||| ||| |||| |||| |||||||||||||||||| |||||   |||||||||||  |||||||||||||||||    
T  3673404 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgg---tgtttgatttcgtgtcttgttgcggtgttc 3673483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 14907031 - 14906939
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||  | ||||||| | ||||||| |||||||||||||| ||||||||||||||||||||  |||| ||||||    
T  14907031 tttttctttgtaatttcatcatcaaaatgtggtgatttgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttca 14906939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 43890232 - 43890140
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||| ||||| | |||||||||||||||||||||  ||| ||||||||||||||||  | |||||||||    
T  43890232 tttttctttgtaatttcatcatctaagtatggtgatttgttgttcgtcgtcttgtgcgacgttatttgatttcccgtcttcgtacggtgttca 43890140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 7883367 - 7883289
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||| |||| || | ||||||||||||||||||||||||    |||||||||| |||||||| ||||||||    
T  7883367 gtgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcacgtcttgtcgcggtgtt 7883289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 37565987 - 37565916
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||| | |||||| |||||| ||||||||||| |||| |||||||||||||||||  |||||||||||    
T  37565987 tttttctttgagatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcggcattgtttgattt 37565916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 8826164 - 8826254
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||| |||||||||||||| ||||||||  | | | ||||||||||||||||||| || ||||| ||| |||  |||||||||||||||||    
T  8826164 tttttttcgtgatttcgtcgtctgagtgcagcgttatgttgttcgtcgtcttgtgtggcgttgtgtgaattcgtgtcttgttgcggtgttc 8826254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 29555141 - 29555183
Alignment:
Q  150 taactgaaaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  29555141 taactgaaaaatacgttttatttttatcttcagcgcgaccatc 29555183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 1236799 - 1236743
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||| ||||||||||| ||||||||||||  | ||||||||||||||||    
T  1236799 tgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttc 1236743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 1239499 - 1239443
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||| ||||||||||||| ||||||||||||  | ||||||||||||||||    
T  1239499 tgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttc 1239443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 9021411 - 9021455
Alignment:
Q  114 caaggcttctatttatagtgaaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  9021411 caaggcttatatttatagtgaaagtaaacccttaaaaaactgaaa 9021455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 15344295 - 15344351
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||||||||||||| || |||||||||  | ||||||||||||||||    
T  15344295 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttc 15344351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 15433360 - 15433416
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||||||||||||| || |||||||||  | ||||||||||||||||    
T  15433360 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttc 15433416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 15524664 - 15524720
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||||||||||||| || |||||||||  | ||||||||||||||||    
T  15524664 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttc 15524720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 16752883 - 16752927
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacga 201  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  16752883 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacga 16752927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 18890835 - 18890769
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | |||||||||||||||||||||||  |||||||||||||    
T  18890835 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttc 18890769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 39657407 - 39657473
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | ||| |||||||||||||||||||| |||||||||||||    
T  39657407 ttcgtgatttcgtcgtcttagtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgatttc 39657473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 24853511 - 24853454
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||| |||| |   |||||||||||| |||||||||||||||||||    
T  24853511 tgtgttgttcgtcgtcctgtgtgacattgtttgatttctcgtcttgttgcggtgttca 24853454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 20227418 - 20227346
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||||||||||| || |||||||| |  | ||| |||||||||||||| ||||  |||||||||||||    
T  20227418 tttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgatttc 20227346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 3240366 - 3240421
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||||||||||||||| ||  ||||||||||||| ||| |||||| ||||||    
T  3240366 tgtgttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtt 3240421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 23230606 - 23230684
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | | ||||||||||||||||||||||    |||||||||| |||||||| ||||||||    
T  23230606 gtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgtcttgtcgcggtgtt 23230684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 23851557 - 23851510
Alignment:
Q  68 gtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||  ||||||||||||||||||||  |||||||||||    
T  23851557 gtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcggtgttca 23851510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 25684465 - 25684430
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25684465 aaaatacgttttatttttatcttcagcgcgaccatc 25684430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 28327730 - 28327695
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  28327730 aaaatacgttttatttttatcttcagcgcgaccatc 28327695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 28332453 - 28332418
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  28332453 aaaatacgttttatttttatcttcagcgcgaccatc 28332418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 28895322 - 28895279
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacg 200  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||    
T  28895322 aaaatacgttttatttttatcttcaccgcgaccatcgtggcacg 28895279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 34609792 - 34609875
Alignment:
Q  31 cgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||| ||| |||| || | || ||||||| ||||||||||||  ||| ||||||||   |||||||||||||||||    
T  34609792 cgtgatttcgtcgtctaagtgcggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgttgcggtgttc 34609875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 15889574 - 15889624
Alignment:
Q  65 ttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||| |||||||||||| || ||| |||||| ||||||    
T  15889574 ttcgtcgtcttgtgcggcgttgtttgattttccttctggttgcgatgttca 15889624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 17430971 - 17430894
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttg 103  Q
    |||||||| |||||||||||||||||||    |||||| ||| || |||||||||  ||||||| ||||| |||||||    
T  17430971 ttcttcgttatttcgtcatctgagtgtgacattgtgttattcttcatcttgtgcgtcgttgtttaatttctcgtcttg 17430894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 759 - 816
Target Start/End: Complemental strand, 18388317 - 18388260
Alignment:
Q  759 gaagaaaagccccaagtgctactgcagctaatggtaatccatcacacttttttgcaat 816  Q
    |||||||| ||||||||| || |||||||||||||| ||| | ||| |||||||||||    
T  18388317 gaagaaaatccccaagtgatattgcagctaatggtattccgtaacatttttttgcaat 18388260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 41896499 - 41896536
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  41896499 tgtgttgttggtcgtcttgtgcggcgttgtttgatttc 41896536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 125; Significance: 6e-64; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 157 - 305
Target Start/End: Complemental strand, 1256 - 1108
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||  ||||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1256 aaaatacgtttttattttatcttcagcgcgaccatcgtggcacaaaatttccagtagcttcccaagaatcttgcttcaacaatcgtggcgcgatgcttct 1157  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1156 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 6e-64; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 35385814 - 35385962
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||| ||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35385814 aaaatactttttatttttatctttagcgcgaccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 35385913  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  35385914 ccatcgtggcacgatactctagatttctgattttaagttaactctcaca 35385962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 25452262 - 25452146
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  25452262 catcgtggcacgaaatttccagtagcttcccaggaatcttgcttcatcaatcgtggcgcgatgcttctccatcgtggcacgattctccatatttctaatt 25452163  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  25452162 ttaagttaactctcaca 25452146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 157 - 305
Target Start/End: Complemental strand, 22672652 - 22672504
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| || ||   |||||||||||||||||| ||||||| |||||| |    
T  22672652 aaaatacattttatttttatcttcagcgcgaccatcgtggcacgaaatttccagtaactccctcagaatcttgcttcaacaattgtggcgcaatgctttt 22672553  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  22672552 ccatcgtggcacgattctccagaattctaattttaagttaactctcaca 22672504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 190 - 305
Target Start/End: Original strand, 2298413 - 2298528
Alignment:
Q  190 atcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattt 289  Q
    ||||||| ||||  |||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2298413 atcatggtacgatttttccagtagcttcctcagaatcttgcttcaacagtcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattt 2298512  T
Q  290 taagttaactctcaca 305  Q
    ||||||||||||||||    
T  2298513 taagttaactctcaca 2298528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 42886449 - 42886541
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||    
T  42886449 tttttcttcgtgatttcatcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttca 42886541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 40222497 - 40222414
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40222497 gaatcttgcttcaacaatcgtggcacgttgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 40222414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 1170580 - 1170470
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||| ||||  || |||||||||||||||||| | || ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1170580 catcgtggcacgaaattttcagtgtctgcccaggaatcttgcttcagccattgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 1170481  T
Q  289 ttaagttaact 299  Q
    |||||||||||    
T  1170480 ttaagttaact 1170470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 42238036 - 42237954
Alignment:
Q  223 aatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42238036 aatcttgcttcaacaatcgtggcacgttgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 42237954  T

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Target: chr5; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 7613166 - 7613074
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  7613166 tttttcttcatgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttca 7613074  T

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Target: chr5; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 220 - 306
Target Start/End: Complemental strand, 25445304 - 25445218
Alignment:
Q  220 aggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||    
T  25445304 aggaatcttgcttcatcaatcgtggcgcgatgcttctccatcatggtacgattctccagatttctaattttaagttaactctcacag 25445218  T

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Target: chr5; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 1240161 - 1240077
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1240161 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcacag 1240077  T

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Target: chr5; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 6747127 - 6747044
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6747127 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 6747044  T

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Target: chr5; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 34881689 - 34881781
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  34881689 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 34881781  T

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Target: chr5; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 43148702 - 43148794
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  43148702 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgctttcccgtcttcttgcgttgttca 43148794  T

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Target: chr5; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 10529555 - 10529638
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  10529555 gaattttgcttcaacaatcgtggcacgaagcttctcgatcgtggcacgattctccagaattctgattttaagttaactctcaca 10529638  T

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Target: chr5; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 7150443 - 7150351
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| ||| |||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  7150443 tttttctttgtgctttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttca 7150351  T

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Target: chr5; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 27576458 - 27576366
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||| ||  ||||||||  |||||||||||||||||||||||||||||||||    
T  27576458 tttttctttgtgatttcgtcatatgagtgtggtggtatgttgttcttctacttgtgcgacgttgtttgatttcccgtcttgttgcggtgttca 27576366  T

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Target: chr5; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 6744884 - 6744801
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  6744884 gaattttgcttcaacaatcgtggcacgaagtttctccatcgtggcacgattctccagaattctgattttaaattaactctcaca 6744801  T

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Target: chr5; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 41184548 - 41184469
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  41184548 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctt 41184469  T

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Target: chr5; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 15570876 - 15570972
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||| | |||||| ||||||||    
T  15570876 taggttttttctttgtgatttcgtcacccgagtgtggtggtgtgttgttcgtcgtcttatgcggtgttgtttga-ttcccatattgttgtggtgttca 15570972  T

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Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 2057946 - 2057854
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||  ||||||| |||||| ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||  |||||||||||    
T  2057946 tttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttca 2057854  T

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Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 27266967 - 27266875
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||   ||||||||||||||||||  |||||||||||    
T  27266967 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttca 27266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 30298174 - 30298269
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||| ||||||||  ||||||| |||||| ||||||||||| |||||||||||||||||||||| | |||||||||| ||||||| ||||||||||    
T  30298174 taggttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgtt 30298269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 19259919 - 19259830
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||  |||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  19259919 tttttctctgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttga-ttcccgtcttcgtgcggtgtt 19259830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 43261927 - 43261837
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||| ||| |||||||  |||||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  43261927 ttttcctttgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtt 43261837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 781355 - 781452
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||| ||||||| |||||||||||||| |||||||   |||||||||||||||||| ||||||||||||    
T  781355 tagggtttttctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcatgtgcggcactgtttgatttcccgtcttcttgcggtgttca 781452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 21060395 - 21060298
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||   | |||||||||||||||| |||| |||||||    
T  21060395 taggttttttcttcgtgatgtcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcactttttgatttcccgtcttcttgcagtgttca 21060298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 3271510 - 3271418
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||| ||||||||||||||| | |||||||||||| |||||||  |||||||||||    
T  3271510 tttttctttgtgatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttca 3271418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 11767780 - 11767856
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgt 99  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||    
T  11767780 tttttcttcgtgatgtcgccatctgagtgtggtggtgtgttgttcgtcgtcttgtacgaagttgtttgattttccgt 11767856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 16981256 - 16981352
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||| |||||||| |||||||| |||||| |||| |||||| ||||||||||||||||||||||  |||||| |||| ||||||| |||||||||||    
T  16981256 taggttttttctttgtgatttcatcatctaagtgcggtggtttgttgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttc 16981352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 36344598 - 36344507
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||  |||||| ||||||||||| |||||||||||||||||||||| |||||||||||| |||| || ||||||||||||    
T  36344598 tttttctttgtgattta-tcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttca 36344507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 4409880 - 4409797
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| |||||| ||||||||||||||||| ||||  |||||||||||||||||| |||||    
T  4409880 gaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaactctgattttaagttaactttcaca 4409797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 19281058 - 19280961
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||| | |||||||| ||| || |||| |||| |||||||    
T  19281058 taggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttca 19280961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 27751892 - 27751989
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||||||||||| |||||||||||| ||| || || | | |||||||||||||||| ||||||||||||    
T  27751892 taggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgccttttggggcgctatttgatttcccgtcttcttgcggtgttca 27751989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 7246930 - 7247022
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||| | |||||||||||||||||||||| ||| |||  ||||| ||||| ||||||||||||    
T  7246930 tttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttattttttttcctgtcttcttgcggtgttca 7247022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 18677573 - 18677481
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||| |  |||||||||||| |||||||  | |||||||||    
T  18677573 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttca 18677481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 28235556 - 28235648
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| |||||| |||| ||||||  |||||||||||||| |||||||||||| || |||| ||||||||||||    
T  28235556 tttttctttgtgatttcatcatctaagtgtgatggtttgttgtctgtcgtcttgtgcggcgttgtttgattttccatcttcttgcggtgttca 28235648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 30371697 - 30371789
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | ||||||||||| |||||||||| ||||||||||||||| ||||  |||||||||||    
T  30371697 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttca 30371789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 407 - 578
Target Start/End: Complemental strand, 16447459 - 16447283
Alignment:
Q  407 ttgtagctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatcaacgaccttgacacaagtacatcaat 506  Q
    ||||| |||| ||||| ||||||||||  |||||||| ||| ||| ||||||| | ||||||| | | ||||||||| |||| ||||| |||| |||||     
T  16447459 ttgtacctaagtcatgcatgaagttattaatttcaaagtttgcttcctcatcatcgatagatcgtagttgtatcaacaacctcgacactagtagatcaa- 16447361  T
Q  507 taaagtatgcttctccaactttttcc---------tgatctgtggacgattctactaagccttctgcaatccacaactgaa 578  Q
       ||||| |||||||||||||||||         |||  |||||||||||||||||| ||||||||||||||||||||||    
T  16447360 ---agtattcttctccaactttttcccaacactcctgacttgtggacgattctactaaaccttctgcaatccacaactgaa 16447283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 19983462 - 19983371
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||| ||||||||||||| ||||||||| | |||||||||||||| ||||||||| |||||| | |||  |||||||||| ||||||||    
T  19983462 ttttctttgtgatttcgtcatatgagtgtggcgctgtgttgttcgtcgccttgtgcggcgttgttagttttttcgtcttgttgtggtgttca 19983371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 10649619 - 10649707
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||| |||||||| |||||| ||||||||    |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  10649619 ttttctttgtgatttcatcatctaagtgtggtt---tgttgttcgtcgtcttgtgcggcgttgtttgatttaccgtcttcgtgcggtgttca 10649707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 39854307 - 39854226
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctca 303  Q
    |||| ||||||||||||||||||| |||  |||||| ||| || |||||||||||||| |||| ||||||||||||||||||    
T  39854307 gaattttgcttcaacaatcgtggcacgaaacttctctatcatgacacgattctccagaattctaattttaagttaactctca 39854226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 7241754 - 7241846
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| | ||||||| | |||||||||||||||||||||| ||| |||  ||||| ||||| ||||||||||||    
T  7241754 tttttctttgtgatttcatcatctaattgtggtgatttgttgttcgtcgtcttgtgcggcgttattttctttcctgtcttcttgcggtgttca 7241846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 35475445 - 35475353
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||| |  |||||||||| ||||||||||||| || ||||| | ||||||||||| |||||| ||||||||||||    
T  35475445 tttttctttgtgatttcatcatttacgtgtggtggtttgttgttcgtcgttttatgcggcgctgtttgatttctcgtcttcttgcggtgttca 35475353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 42579859 - 42579951
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||| | |||||||||||||||||||||  |||||||||||| | |||||  ||| |||||||    
T  42579859 tttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttctgtcttcgtgcagtgttca 42579951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 7887046 - 7886956
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||  ||||||| |||||| ||||||||||| |||||||||||||||||| |    ||||||||||| ||||||| ||||||||||    
T  7887046 tttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacaacattgtttgattttccgtcttcttgcggtgtt 7886956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 26578223 - 26578315
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| | ||| ||| | |||||||||||||||||||||  ||||||||||||||||||||  ||| |||||||    
T  26578223 tttttctttgtaatttcatcatctaaatgtagtgatttgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttca 26578315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 31802549 - 31802487
Alignment:
Q  53 ggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||||||  ||||||||||| |||||||||||||| ||| ||||||||||||||    
T  31802549 ggtgttgtgttgttcgctgtcttgtgcggcgttgtttgatttccggtcatgttgcggtgttca 31802487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 20257802 - 20257711
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||| | |||| | |||||||||||||  | ||||||||||||||||||||||   ||  ||||||| ||||||||||||||||||||    
T  20257802 tttttcttcattattttgccatctgagtgtggcagcgtgttgttcgtcgtcttgtgcgacatt-attgattttccgtcttgttgcggtgttca 20257711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 10332653 - 10332598
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||||| |||||    
T  10332653 tgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtt 10332598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 14726589 - 14726511
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| |||| ||||||||||||||||||||||   | ||||||||||| ||||||||  |||||||    
T  14726589 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgc---gatgtttgatttcgcgtcttgtcacggtgtt 14726511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 19120896 - 19120951
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||||||||||||| || ||  |||||||||||| |||||||||||||||||    
T  19120896 tgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtt 19120951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 4954005 - 4954055
Alignment:
Q  65 ttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||| |||||||  ||||||||||| ||||||||||||    
T  4954005 ttcgtcgtcttgtgcggcgttgttttctttcccgtcttcttgcggtgttca 4954055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 14211177 - 14211243
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |    |||||||||||||||||||||||| |||||||||||||    
T  14211177 ttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 14211243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 250 - 300
Target Start/End: Original strand, 17841766 - 17841816
Alignment:
Q  250 tgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 300  Q
    ||||||||||||||| |||| ||||||||||| |||||||||| |||||||    
T  17841766 tgcttctccatcgtgacacgtttctccagattcctgattttaaattaactc 17841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 19103605 - 19103539
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | ||||||||| |||||||||||||| |||||||||||||    
T  19103605 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttagtcgtcttgtgcggcgttgtttgatttc 19103539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 28541044 - 28540978
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||||| || ||| |||| |  | |||||||||||||||||||||||| |||||||||||||    
T  28541044 ttcgtgatttcatcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 28540978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 35921130 - 35921044
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||| |||||||| |    | | |||||||||||||| || |  ||||||||||||| |||||||||||||||||||    
T  35921130 ttcgtgatttcgtcgtctgagtgcgacattatattgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttgcggtgttca 35921044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 19349680 - 19349729
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgc 107  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||| |||||    
T  19349680 tgtgttgttcgtcgtcttgtgcggcgttatttgatttcacgtctagttgc 19349729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 2979444 - 2979384
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgttt 89  Q
    |||||||||||||| ||| |||| |  | |||||||||||||||||||||||| |||||||    
T  2979444 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgttt 2979384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 1170633 - 1170598
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1170633 aaaatacgttttatttttatcttcagcgcgaccatc 1170598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 1582231 - 1582148
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    ||||||| ||||||||| || | |||||| |  | ||||| ||| |||||||||||||| ||||||||||||  ||||||||||    
T  1582231 tttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 1582148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 1602584 - 1602667
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    ||||||| ||||||||| || | |||||| |  | ||||| ||| |||||||||||||| ||||||||||||  ||||||||||    
T  1602584 tttttctacgtgatttcatcgtatgagtgcgacgttgtgtcgtttgtcgtcttgtgcggcgttgtttgatttttcgtcttgttg 1602667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 6012266 - 6012188
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||| || ||| |||| |||| ||||||||||||||||||||||||    |||||||||| ||| |||| ||||||||    
T  6012266 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgttttgtcgcggtgtt 6012188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 11192338 - 11192421
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    |||| |||||||| |||||| | ||||||||||| ||||||||| |||||||||| |  |||||||| || ||  |||||||||    
T  11192338 ttttccttcgtgagttcgtcgtttgagtgtggtgttgtgttgtttgtcgtcttgtacaatgttgtttaatctcttgtcttgttg 11192421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 24229912 - 24229834
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||| |||| || | | ||||||||||||||||||   |||  |||||||||| |||||||| ||||||||    
T  24229912 gtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtcttgt---gtgacgtttgatttcgcgtcttgtcgcggtgtt 24229834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 25452315 - 25452280
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25452315 aaaatacgttttatttttatcttcagcgcgaccatc 25452280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 38597757 - 38597835
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    |||||||||| |||||||| | ||||||    
T  38597757 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgtcttgtcgtggtgtt 38597835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 28097125 - 28097203
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| |||||||||  | ||||| |  || ||||||| | ||||| |||||||||||||||||||||| ||||||    
T  28097125 ttttcttcatgatttcgttgtatgagtataatgttgtgttggttgtcgttttgtgcggtgttgtttgatttctcgtctt 28097203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 31179883 - 31179933
Alignment:
Q  255 ctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||| ||||||||| ||||   |||||||||||||||||||||||    
T  31179883 ctccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 31179933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 39567252 - 39567318
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||| ||||| ||| |||| |  | |||||||||||| ||||||||||| |||||||||||||    
T  39567252 ttcgtgatctcgtcgtcttagtgcgacgttgtgttgttcgttgtcttgtgcggcgttgtttgatttc 39567318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 13007189 - 13007238
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  13007189 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 13007238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 1e-58; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 157 - 292
Target Start/End: Complemental strand, 25941465 - 25941330
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| ||||||   ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25941465 aaaatacgttttatttttatcttcagcgatgccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 25941366  T
Q  257 ccatcgtggcacgattctccagatttctgattttaa 292  Q
    ||||||||||||||||||||||||||||||||||||    
T  25941365 ccatcgtggcacgattctccagatttctgattttaa 25941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 13883244 - 13883128
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13883244 catcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 13883145  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  13883144 ttaagttaactctcaca 13883128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 31249127 - 31249243
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31249127 catcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 31249226  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  31249227 ttaagttaactctcaca 31249243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 35201739 - 35201855
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  35201739 catcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 35201838  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  35201839 ttaagttaactctcaca 35201855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 13878496 - 13878380
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  13878496 catcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcatggcacgatgctccagatttctgatt 13878397  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  13878396 ttaagttaactctcaca 13878380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 26887638 - 26887754
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26887638 catcgtggcacgaaatttccagtgtctgcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 26887737  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  26887738 ttaagttaactctcaca 26887754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 30975112 - 30975230
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||||||||| |  ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30975112 catcgtggcacgaaatttccaatgtcttccaaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 30975211  T
Q  289 ttaagttaactctcacagg 307  Q
    |||||||||||||||||||    
T  30975212 ttaagttaactctcacagg 30975230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 30981551 - 30981669
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||||||||| |  ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30981551 catcgtggcacgaaatttccaatgtcttccaaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 30981650  T
Q  289 ttaagttaactctcacagg 307  Q
    |||||||||||||||||||    
T  30981651 ttaagttaactctcacagg 30981669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 30987715 - 30987833
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||||||||| |  ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30987715 catcgtggcacgaaatttccaatgtcttccaaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 30987814  T
Q  289 ttaagttaactctcacagg 307  Q
    |||||||||||||||||||    
T  30987815 ttaagttaactctcacagg 30987833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 17695266 - 17695382
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||| ||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17695266 catcgtggcacaaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagaattctgatt 17695365  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  17695366 ttaagttaactctcaca 17695382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 189 - 306
Target Start/End: Original strand, 25466315 - 25466432
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||||||||||||||||||   |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  25466315 catcgtggcacgaaatttccagtagcttccttagaatcttgcttcaacaattgtggcacgatgcttctccatcgtggcatgattctctagatttctgatt 25466414  T
Q  289 ttaagttaactctcacag 306  Q
    ||||||||||||||||||    
T  25466415 ttaagttaactctcacag 25466432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 35208974 - 35209090
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||  ||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  35208974 catcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccattgtggcacgatactccagatttctgatt 35209073  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  35209074 ttaagttaactctcaca 35209090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 16785673 - 16785572
Alignment:
Q  204 tttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctca 303  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  16785673 tttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttttcgatcgtggcacgatgctccagatttctgattttaagttaactctca 16785574  T
Q  304 ca 305  Q
    ||    
T  16785573 ca 16785572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 25337539 - 25337631
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  25337539 tttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttca 25337631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 33543728 - 33543636
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  33543728 tttttcttcgtgatttcgtcatctgattatggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgttca 33543636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 1230684 - 1230767
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1230684 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 1230767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 26064839 - 26064756
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26064839 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 26064756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 26084808 - 26084725
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26084808 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 26084725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 34489214 - 34489311
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||| | |||||| ||||||||    
T  34489214 taggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttca 34489311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 16419127 - 16419219
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  16419127 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttca 16419219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 35001559 - 35001651
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  35001559 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttca 35001651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 23947431 - 23947334
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||  ||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  23947431 taggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttca 23947334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 4984675 - 4984583
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||| |||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||  || ||||||||    
T  4984675 ttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttca 4984583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 8196515 - 8196423
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||| | ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  8196515 tttttctttgtgatttcatcatataagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttca 8196423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 28635229 - 28635137
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||| |||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||||||||||||| ||| | |||||||||||||    
T  28635229 tttttctacgtgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttca 28635137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 28241782 - 28241861
Alignment:
Q  227 ttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  28241782 ttgctccaacaatcgtggcacgaagcttctccatcgtggcacgattcttcagaattctgattttaagttaactctcacag 28241861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 17237398 - 17237301
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| ||||||||  ||||| ||||||||||| |||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||    
T  17237398 taggttttttctttgtgatttcagcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgctgttggatttcccgtcttcttgcggtgttca 17237301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 26642912 - 26642829
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||| |||||||||||| || || | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  26642912 gaatcttgtttcaacaatcgttgcacgttccttctccatcgtggcacgtttctccagattcctgattttaagttaactctcaca 26642829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 26748878 - 26748795
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||| |||||||||||| || || | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  26748878 gaatcttgtttcaacaatcgttgcacgttccttctccatcgtggcacgtttctccagattcctgattttaagttaactctcaca 26748795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 22343257 - 22343331
Alignment:
Q  227 ttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactct 301  Q
    ||||||||||||||||||| ||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  22343257 ttgcttcaacaatcgtggcacgaagcttctccatcgtggcttgattctccagaattctgattttaagttaactct 22343331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 4352101 - 4352012
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||| || || ||| |||||||||||||| || |||||| ||||    
T  4352101 ttcttcgtgatttcgtcatccgagtgtggtgatgtgttgttcgtcgtcttatgtggcgttatttgatttcccgtcatggtgcggtattca 4352012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 8028226 - 8028149
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtc 100  Q
    ||||||||  ||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  8028226 tttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtc 8028149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 13467955 - 13468036
Alignment:
Q  224 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||| || |||||||||||||||| | | ||||||| ||| |||||||||||||||||||||||    
T  13467955 atcttgcttcaacaatcgtggcacgttgcttctccatcgtggtatgtttctccaaattcctgattttaagttaactctcaca 13468036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 4088429 - 4088521
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||  ||||||| |||||| ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||  |||| ||||||    
T  4088429 tttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttca 4088521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 10228648 - 10228740
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||| | |||||| |||| |||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||    
T  10228648 tttttctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttca 10228740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 25064205 - 25064297
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||| ||  |||||||||||    
T  25064205 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttca 25064297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 12652913 - 12653005
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||| |||||||| |||||| ||||||||||| |||||||| ||||||||||||| |||||||||||| || ||||  |||||||||||    
T  12652913 ttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttca 12653005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 33215545 - 33215499
Alignment:
Q  259 atcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  33215545 atcgtggcacgattctccagatttctgattttaagttaactctcaca 33215499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 4468522 - 4468619
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||| | ||||||||||| |||| ||||||||||||||| | |||||||||||| |||||||  ||| |||||||    
T  4468522 taggttttttctttgtgatttcatcatataagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcatgcagtgttca 4468619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 7881198 - 7881117
Alignment:
Q  35 atttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttcaa 116  Q
    ||||| |||||| ||||||||| | |||||||||||||||||||||| |||||||||||| || ||||  ||||||||||||    
T  7881198 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgttcaa 7881117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 12165804 - 12165900
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| ||| |||  |||||| ||||||||||| |||||||||||||||||||||| |||||| |||||| ||| || ||||||||||||    
T  12165804 taggttttttctttgtggttttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttcgatttcacgt-ttcttgcggtgttca 12165900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 26588577 - 26588521
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||    
T  26588577 tgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttc 26588521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 33110608 - 33110672
Alignment:
Q  51 gtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| ||||||  |||||||||||    
T  33110608 gtggtggtttgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttca 33110672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 33740686 - 33740594
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||| ||| ||||||||||||| |||||||| ||||||| |||| ||||| |  |||||||||||    
T  33740686 tttttctttgtgatttcatcatctaagtgtggcggtttgttgttcgtcgttttgtgcggcgttgtttcatttaccgtcctcgtgcggtgttca 33740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 22352303 - 22352386
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||| ||||||||||||||| ||| |||||||||| || ||||||||||| ||| ||  |||||||||||||||||||||    
T  22352303 gaattttgattcaacaatcgtggcacgaagcttctccattgtagcacgattctctagaatttagattttaagttaactctcaca 22352386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 7976316 - 7976226
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||| |||||||||||||| |||||||| | || |||||||||||||||||||||||| ||| ||| |||   |||||||||| |||||||    
T  7976316 tttttttcgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgtggtgttc 7976226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 30493488 - 30493554
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||||| || |||||||| |||| |||||||||||||||||||||| | |||||||||||||    
T  30493488 ttcgtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttc 30493554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 31575638 - 31575556
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||||||||| || |||| | |||||||| ||||| ||||||  ||||||||||||| |||||||||||| |||||    
T  31575638 gtgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttgcgatgttc 31575556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 7876140 - 7876059
Alignment:
Q  35 atttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttcaa 116  Q
    ||||| |||||| ||||||||| | |||||||||||||||||||||  |||||||||||| || ||||  ||||||||||||    
T  7876140 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgttcaa 7876059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 17334747 - 17334826
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| || ||||| | |||| ||||||||| | |||||| ||||||||||||||| |||||||||||| |||||||    
T  17334747 tttttctttgtaatttcataatctaagtgtggtgatttgttgtacgtcgtcttgtgcggcgttgtttgattttccgtctt 17334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 7027812 - 7027874
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||| |||| | ||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  7027812 gtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtacggagttgtttgattt 7027874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 26887578 - 26887620
Alignment:
Q  150 taactgaaaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  26887578 taactgaaaaatacgttttatttttatcttcagcgcgaccatc 26887620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 1704258 - 1704166
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || |||| ||| ||||||||||||| ||||||||||||  ||||||||    || ||| ||||| |||||||||||||||||||    
T  1704258 tttttcttagtaattttgtcgtctgagtgtggtgttgtgttgttcgtgatcttgtgcaacattatttaatttctcgtcttgttgcggtgttca 1704166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 8496936 - 8497028
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| ||  |||| |||| | |||| |||| | ||||||||||| |||||||||| ||||||||||||| ||||||  |||||||||||    
T  8496936 tttttctttgtagtttcatcatttaagtgcggtgatttgttgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttca 8497028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 13878549 - 13878505
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacga 201  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  13878549 aaaatacgttttatttttatcttcagcgcgaccatcgtggcacga 13878505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 15533145 - 15533220
Alignment:
Q  230 cttcaacaatcgtggcgcgatgcttctccatcgtggcacgatt-ctccagatttctgattttaagttaactctcaca 305  Q
    ||||||| |||||||| || ||||||||||||||||||||||| ||  ||||  |||||||||||||||||||||||    
T  15533145 cttcaaccatcgtggcacgttgcttctccatcgtggcacgatttctgtagatc-ctgattttaagttaactctcaca 15533220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 25092437 - 25092520
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||||||||| | ||||||||||  |||||||||  |||||| || |||| | || ||||| |||||||||    
T  25092437 gtgatttcgtcatctgagtgtggcgttgtgttgttcagcgtcttgtgtagtgttgcttaatttactgttttgtttcggtgttca 25092520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 8266614 - 8266703
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| ||||||| ||| |||| ||| | || |||||| ||||| ||||||||||| ||||||||||||  |||||| ||| ||||||||    
T  8266614 ttctttgtgattttgtcgtctgggtgcgttgctgtgttattcgttgtcttgtgcggcgttgtttgatttgtcgtcttattgaggtgttca 8266703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 14507668 - 14507717
Alignment:
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    |||||||| ||||||||| ||||  |||||||||||||||||||||||||    
T  14507668 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcacag 14507717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 30776624 - 30776689
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||||||||| ||| |||| |  | ||||||||||||| |||||||||| ||||||||||||    
T  30776624 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcatcttgtgcggcgttgtttgattt 30776689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 31296769 - 31296862
Alignment:
Q  23 tttttcttc-gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||| ||| |||||| || |||||| || | |||||||||| || |||||||||| ||||||||||||  | ||||||||| |||||||    
T  31296769 tttttcttctgtgttttcgttatttgagtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttca 31296862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 22571459 - 22571495
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||||||||||||||||||| ||||||||||||    
T  22571459 tgtgttgttcgtcgtcttgtgcggcgttgtttgattt 22571495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 28981162 - 28981198
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28981162 tgtgttgttcgtcgtcttctgcggtgttgtttgattt 28981198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 13883297 - 13883262
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  13883297 aaaatacgttttatttttatcttcagcgcgaccatc 13883262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 33053296 - 33053218
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    |||||||||| ||| |||| ||||||||    
T  33053296 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgttttgtcgcggtgtt 33053218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 1523360 - 1523426
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | |||||||||||||||||||||||   ||||||||||||    
T  1523360 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcgacattgtttgatttc 1523426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 1933832 - 1933742
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggt-gtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||| |||||||||||||| |||||| ||||  || |||||| | ||||||||||||||  |||||||||||   |||| |||||||||||    
T  1933832 tttttttcgtgatttcgtcgtctgagagtgggcgttgtgttgctagtcgtcttgtgcggcattgtttgattttgtgtctggttgcggtgtt 1933742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 6957111 - 6957192
Alignment:
Q  31 cgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||| ||||| ||||||| ||||||||||||||| || |   ||| ||||| ||||| ||||||||||| |||||||    
T  6957111 cgtggtttcgtcgtctgattgtggtgttgtgttgttcgtcgttttat---gtggtgtttcatttcacgtcttgttgcagtgttca 6957192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 8102678 - 8102744
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| ||||    | |||||| ||||||||||||||||| |||||||||||||    
T  8102678 ttcgtgatttcgtcgtcttagtgcaacgttgtgtttttcgtcgtcttgtgcggcgttgtttgatttc 8102744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 34018522 - 34018568
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtg 78  Q
    ||||||||||| ||| ||||||| | |||||||||||||||||||||    
T  34018522 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtg 34018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 14801779 - 14801844
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||||||||| ||| |||| |    |||||||||||||||||||||||| | ||||||||||    
T  14801779 ttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtcttgtgcggcgctgtttgattt 14801844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 17695155 - 17695200
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  17695155 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 17695200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 25466203 - 25466248
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  25466203 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 25466248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 25941523 - 25941478
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  25941523 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 25941478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 30140627 - 30140574
Alignment:
Q  61 gttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||| |||||||||||||  ||| |||||||| ||||||||||| ||||||    
T  30140627 gttgttcatcgtcttgtgcggcattgcttgatttcacgtcttgttgcagtgttc 30140574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 32327319 - 32327267
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||||||||||||    |||||||||| |||||||| ||||||||    
T  32327319 tgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgtcttgtcgcggtgtt 32327267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 2e-57; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 188 - 305
Target Start/End: Complemental strand, 9521484 - 9521367
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9521484 ccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 9521385  T
Q  288 tttaagttaactctcaca 305  Q
    ||||||||||||||||||    
T  9521384 tttaagttaactctcaca 9521367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 21353708 - 21353857
Alignment:
Q  157 aaaatacgttttattttt-atcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttc 255  Q
    |||||||||||||||||| ||| |||||||| ||||| |||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  21353708 aaaatacgttttattttttatcttcagcgcgcccatcgtggcacgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttc 21353807  T
Q  256 tccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21353808 tccatcgtggcacgattctccagatttctgattttaagttaactcccaca 21353857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 157 - 305
Target Start/End: Complemental strand, 2232419 - 2232262
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgac---------catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgc 247  Q
    ||||||||||||||||||||| |||||||||          |||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  2232419 aaaatacgttttatttttatcttcagcgcgagaccctgcttcatcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgc 2232320  T
Q  248 gatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  2232319 gatgcttctccatcgtggcatgatgctccagatttctgattttaagttaactctcaca 2232262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 394 - 645
Target Start/End: Complemental strand, 17312405 - 17312158
Alignment:
Q  394 gaagatgaaaattttgtagctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatcaacgaccttgaca 493  Q
    ||||||||||   ||||||| |||||||||| || | ||||||||||||| ||| ||| |||||  |||||||||| | ||||||||||||| |||||||    
T  17312405 gaagatgaaaccattgtagccaaatcatggaggaggctatgcatttcaaagtttgcttcctcattgccaatagatcgtcgatgtatcaacgatcttgaca 17312306  T
Q  494 caagtacatcaattaaagtatgcttctccaactttttcctgatctgtggacgattctactaagccttctgcaatccacaactgaactaccatcnnnnnnn 593  Q
    | ||| ||||||    ||||| ||||||| |||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||||              
T  17312305 ctagttcatcaa----agtattcttctccgactttttcctgatctgcggacgattctaccaacccttctgcaatccacaattgaactaccgcattttttt 17312210  T
Q  594 ctaatatggacttcttcggaaaaattgaacaataatcaaaacaccgttttaa 645  Q
    |||| ||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  17312209 ctaagatggatttcttcggaaaaattgaacaatattcaaagcaccgttttaa 17312158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 9526233 - 9526117
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9526233 catcgtggcacgaaatttccagtgtcttcccagaaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 9526134  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  9526133 ttaagttaactctcaca 9526117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 39927662 - 39927570
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  39927662 tttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttca 39927570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 2393729 - 2393812
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2393729 gaatcttgcttcaacaatcgtggcgtgaagcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 2393812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 18569415 - 18569326
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  18569415 ttcttcgtgatttcgtcatttgagtgtggtggtgtgttgttcgtcatcttgtccggtgttgttagatttcccgtcttgttgcggtgttca 18569326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 2401643 - 2401726
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2401643 gaatcttgcttcaacaatcgtggcgaaaagcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 2401726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 2617363 - 2617280
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2617363 gaattttgcttcaacaatcgtggcacgaaacttctccatcgtggcacgattctccagaattctgattttaagttaactctcaca 2617280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 3871381 - 3871472
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||| | |||||||||||||||||||| |||||||||||    
T  3871381 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcttgcggtgttc 3871472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 25133762 - 25133680
Alignment:
Q  224 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    |||||||||||||||||||||| || ||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  25133762 atcttgcttcaacaatcgtggcacgttgcttctccatcgtgacacgtttctccagattcctgattttaagttaactctcacag 25133680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 48365878 - 48365781
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||   ||||||| ||||||||||    
T  48365878 taggttttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgttca 48365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 5324666 - 5324574
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||| |||||||| |||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  5324666 ttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttgtgcggtattgtttgatttcccgtctttttgcggtgttca 5324574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 7342695 - 7342787
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||    
T  7342695 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgttttcccgtcttcttgcgttgttca 7342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 23689313 - 23689385
Alignment:
Q  234 aacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||    
T  23689313 aacaatcgtggcgcgatgcttctccatcgtggcatgattctctagatttttgattttaagttaactctcacag 23689385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 25406392 - 25406300
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||| || |||||||| ||||||||||| ||||||||||||    
T  25406392 tttttctttgtgatttcgtcatctaagtgtggtggtttattgttcgtcgtcttgtgtggcgttgtttgctttcccgtcttcttgcggtgttca 25406300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 28035112 - 28035204
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  | |||||||||    
T  28035112 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttca 28035204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 31836780 - 31836872
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  31836780 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgcggtgttca 31836872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 33291526 - 33291434
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||    
T  33291526 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttca 33291434  T

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Target: chr1; HSP #21
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 39987362 - 39987454
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||  |||| |||||||||||||| |||||||||||||||||||| |||||||||||| |||| ||| |||||||||||    
T  39987362 tttttcttcgtgatttcaccatccgagtgtggtggtgtattgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttca 39987454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 51868753 - 51868661
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||    
T  51868753 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttca 51868661  T

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Target: chr1; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 9687309 - 9687220
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| |||||||| |||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||    
T  9687309 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttca 9687220  T

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Target: chr1; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 11453903 - 11454000
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||| | | |||||||||||||||||| ||||||| ||||    
T  11453903 taggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgctgtttgatttcccgtctttttgcggtattca 11454000  T

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Target: chr1; HSP #25
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 40881109 - 40881028
Alignment:
Q  34 gatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  40881109 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 40881028  T

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Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 5701232 - 5701324
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  5701232 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 5701324  T

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Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 9919362 - 9919454
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| ||||||||  ||||| ||||||||||| |||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||    
T  9919362 tttttctttgtgatttcaccatctaagtgtggtggtttgttgttcgtcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttca 9919454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 51871836 - 51871928
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||  |||||||| ||| ||||||| ||||||||||||    
T  51871836 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttca 51871928  T

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Target: chr1; HSP #29
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 9172472 - 9172555
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||  |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  9172472 gtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttca 9172555  T

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Target: chr1; HSP #30
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 9180454 - 9180537
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||  |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  9180454 gtgattttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttca 9180537  T

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Target: chr1; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 14545487 - 14545583
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||  | ||||||| |||||||||| ||||||||||||    
T  14545487 taggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgctgtttga-ttcccgtcttcttgcggtgttca 14545583  T

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Target: chr1; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 34519100 - 34519197
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||  ||||||| |||||| ||||||||||| ||||||||||||| |||||||| ||||||||||||| |||||| ||| ||||||||    
T  34519100 taggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttca 34519197  T

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Target: chr1; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 44637397 - 44637486
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| ||||||||||||||| | ||||||| |||||||||||| ||||||||||  |||||||| |||||||||||||| |||||||||    
T  44637397 ttctttgtgatttcgtcatctaaatgtggtgatgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttca 44637486  T

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Target: chr1; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 47132861 - 47132946
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||| |||||||| || | ||||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||    
T  47132861 ttcgtgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttc 47132946  T

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Target: chr1; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 7997762 - 7997854
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||    
T  7997762 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttca 7997854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 50166207 - 50166115
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||  |||||||| |||||| ||||||||||| |||||||||||||||||||||| ||| |||| |||| |||||| ||||||||||||    
T  50166207 tttttctatgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttatttgctttctcgtcttcttgcggtgttca 50166115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 45426165 - 45426082
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||| || |  |||||||||||    
T  45426165 gtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcatcgtgcggtgttca 45426082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 7312212 - 7312121
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||     ||||||||||| ||||||||||||||||||||    
T  7312212 taggttttttcttcgtgatttcgt-atctaagtgtggtggtgtgttgttcattgtcttgtg-----ttgtttgattttccgtcttgttgcggtgttca 7312121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 19723306 - 19723383
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtc 100  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||| ||||| |||||||||||| |||||    
T  19723306 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgttgtttgattttccgtc 19723383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 41081817 - 41081720
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||| |||||| ||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||| |||||  | |||||||| |||||||    
T  41081817 taggttttttcatcgtgacttcgtcatccgagtgtggtggtgtgttgttcatcggcttgtgcggcgttgtttaatttcatgccttgttgcagtgttca 41081720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 27872711 - 27872803
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||| | |||||| ||||||||||| |||||||||||||||||| ||  ||||||||||||   ||||| ||||||||||||    
T  27872711 tttttcttcgtgattgcatcatctaagtgtggtggtttgttgttcgtcgtcttgttcgacgttgtttgattttttgtcttcttgcggtgttca 27872803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 50272248 - 50272156
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| || ||| ||| ||||| | ||||||||||||| |||||||| ||||||||||||||||||||  |||||||||||    
T  50272248 tttttctttgtgatttcatcttctaagtttggtgatttgttgttcgtcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 50272156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 38520642 - 38520547
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgt---cgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||| |||||| || |||||||| ||||||||||   ||||||||| || ||||||||||||||||| || || |||||||||    
T  38520642 tttttcttcgtgatttcatcatctaagagtggtggtttgttgttcgtcgtcgtcttgtgtggcgttgtttgatttcccgtattcttacggtgttca 38520547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 19715990 - 19715911
Alignment:
Q  35 atttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| |||||| ||||||||| | |||||||||||||||||||| | ||||||||||||||||||||  |||||||||||    
T  19715990 atttcatcatctaagtgtggtgat-tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttca 19715911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 20266275 - 20266363
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtg 111  Q
    |||||||| || ||||| |||||| ||||||||| | ||||||||||||||||||| ||  |||||||||||||||||||  |||||||    
T  20266275 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggaattgtttgatttcccgtcttcgtgcggtg 20266363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 43 - 115
Target Start/End: Complemental strand, 35584706 - 35584634
Alignment:
Q  43 atctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||| | |||||||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  35584706 atctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttca 35584634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 29837728 - 29837646
Alignment:
Q  27 tcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcgg 109  Q
    ||||||| |||||||| | |||||||||   |||||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  29837728 tcttcgttatttcgtcgtatgagtgtggcaatgtgttgttcgatgtcttgtgcgacgttgtttgatttcccgtcttgttgcgg 29837646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 31692600 - 31692515
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||| ||| ||||||||||    || |||||| |||||||||||||||||||||||||||  | ||||||||||||||||    
T  31692600 ttcgtgattttgtcgtctgagtgtgacattgcgttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttgcggtgttc 31692515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 30879049 - 30879140
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||| | ||||||||| | |||||||||||||||||||| | |||||||||||| |||||||  |||||||||||    
T  30879049 tttttctttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgc-gcgttgtttgattttccgtcttcgtgcggtgttca 30879140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 49626901 - 49626957
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||||||||||||| ||||||||||||  | ||||||||||||||||    
T  49626901 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttc 49626957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 34528717 - 34528772
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||    
T  34528717 tgtgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtt 34528772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 9341687 - 9341769
Alignment:
Q  31 cgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||||||| ||||||||  ||| | |||||||||||||||||||| | |||||||||||    ||||||||||||||||    
T  9341687 cgtgatttcgtcgtctgagtggagtgttatgttgttcgtcgtcttgtgcagcgttgtttgattctgtgtcttgttgcggtgtt 9341769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 16161792 - 16161858
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | |||||||||||||||||||||||| |||||||||||||    
T  16161792 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 16161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 16262822 - 16262904
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||| ||| ||||||||||| | || |||||| || || |||||||| ||||||||||||| |||||||||| |||||||    
T  16262822 gtgattttgtcgtctgagtgtggcgatgcgttgttggttgttttgtgcggcgttgtttgatttcgcgtcttgttgtggtgttc 16262904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 32679235 - 32679158
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtc 100  Q
    ||||| ||||||||||| || |||||||| || | ||||||||||||| |||||||||| || |||||||||| ||||    
T  32679235 ttttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcggcgtagtttgatttcgcgtc 32679158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 30818454 - 30818367
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| || |||||||| |||||| ||||||||||| ||||||||||||||||     |||||||||||| ||||||| |  |||||||||||    
T  30818454 tttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtctt-----gtgttgtttgatctcccgtcattgtgcggtgttca 30818367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 633
Target Start/End: Complemental strand, 13933875 - 13933792
Alignment:
Q  550 tactaagccttctgcaatccacaactgaactaccatcnnnnnnnctaatatggacttcttcggaaaaattgaacaataatcaaa 633  Q
    |||||| |||||||||||||||||||||||||||||        |||| || || |||||||||||||||||||| ||| ||||    
T  13933875 tactaaaccttctgcaatccacaactgaactaccatatttttctctaagattgagttcttcggaaaaattgaacagtaagcaaa 13933792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 36775848 - 36775782
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||||| |||| | |||| |  | |||||||||||||||||||||| |||||||||||||||    
T  36775848 ttcgtgatttcttcattttagtgcgacgttgtgttgttcgtcgtcttgtgcagtgttgtttgatttc 36775782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 12635157 - 12635214
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||||||||| ||||||||||||  ||| |||| | ||||||||    
T  12635157 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttca 12635214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 34413199 - 34413162
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||||||||||||| |||||||||||||    
T  34413199 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 34413162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 19060897 - 19060953
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||||||||||||| || ||||||||||||  | ||||||||| ||||||    
T  19060897 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttgcagtgttc 19060953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 20291328 - 20291280
Alignment:
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||| ||||||||| ||||  ||||||||||||||||||||||||    
T  20291328 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 20291280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 24582938 - 24582994
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||| ||| ||||||||| ||||||||||||  | ||||||||||||||||    
T  24582938 tgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttc 24582994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 158
Target Start/End: Complemental strand, 9521584 - 9521549
Alignment:
Q  123 tatttatagtgaaagtaaacccttaaataactgaaa 158  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9521584 tatttatagtgaaagtaaacccttaaaaaactgaaa 9521549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 9526286 - 9526251
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  9526286 aaaatacgttttatttttatcttcagcgcgaccatc 9526251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 13461338 - 13461392
Alignment:
Q  251 gcttctccatcgtggcacgatt-ctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||| || |||| | |||||||||||||||||||||||    
T  13461338 gcttctccatcgtggcacgattcctgcaga-tcctgattttaagttaactctcaca 13461392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 14872630 - 14872684
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||||||||||    |||||||||| |||||||| ||||||||||    
T  14872630 tgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgtcttgtcgcggtgttca 14872684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 771 - 813
Target Start/End: Complemental strand, 17312026 - 17311984
Alignment:
Q  771 caagtgctactgcagctaatggtaatccatcacacttttttgc 813  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||    
T  17312026 caagtgctactgcagctaatggtaatccataacattttattgc 17311984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 568877 - 568828
Alignment:
Q  65 ttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||||||| ||||||||||||||  || |||||| ||||||||    
T  568877 ttcgtcgtcttgtgcagtgttgtttgattttacgacttgttacggtgttc 568828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 4396945 - 4397034
Alignment:
Q  25 tttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||| ||||||||||| | |||||| |  | ||||||||| |||||||| || | | |||||||||||| |||| ||||||| |||||    
T  4396945 tttctttgtgatttcgtcgtttgagtgcgacgatgtgttgtttgtcgtcttatgtgatattgtttgatttctcgtcatgttgcgatgttc 4397034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 9526344 - 9526299
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  9526344 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 9526299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 34878380 - 34878328
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||||||||||||   ||||||||||| ||| |||| ||||||||    
T  34878380 tgtgttgttcgtcgtcttgtgcgg---tgtttgatttcgcgttttgtcgcggtgtt 34878328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 106
Target Start/End: Original strand, 39724932 - 39725017
Alignment:
Q  21 gatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    ||||||| |||||||||||||| ||||||||||| | ||| ||||||  ||||||  |||   |||||||||||| || |||||||    
T  39724932 gatttttattcgtgatttcgtcgtctgagtgtggcgatgttttgttcaacgtcttacgcgacattgtttgatttctcgccttgttg 39725017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 48750168 - 48750205
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||||||||||||  |||||||||||||    
T  48750168 tgtgttgttcgtcgtcttgtgcgacgttgtttgatttc 48750205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 188 - 305
Target Start/End: Complemental strand, 16093 - 15976
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    ||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16093 ccatcgtggcacgaaatttctagtagcttcccaggaagcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 15994  T
Q  288 tttaagttaactctcaca 305  Q
    ||||||||||||||||||    
T  15993 tttaagttaactctcaca 15976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 5e-52; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 7464881 - 7465029
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    |||||||||||||   ||||| | |||||| ||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  7464881 aaaatacgttttaaaattatcttgagcgcgtccatcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttct 7464980  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7464981 ccatcgtggcacgattctccagaattctgattttaagttaactctcaca 7465029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 34547225 - 34547373
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| ||| ||   ||||| |||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  34547225 aaaatacgttttatttttatcttcaacgatgccatcgtggcacgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttct 34547324  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34547325 ccatcgtgacacgattctccagatttctgattttaagttaactctcaca 34547373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 157 - 305
Target Start/End: Complemental strand, 30246790 - 30246642
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    |||||||||||||    |||| |||||||| ||||| |||||||||||||||| ||||||||   |||||||||||||||||||||||||| ||||||||    
T  30246790 aaaatacgttttaaaaatatcttcagcgcgtccatcgtggcacgaaatttccaatagcttcctcagaatcttgcttcaacaatcgtggcgcaatgcttct 30246691  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30246690 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 30246642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 7069549 - 7069433
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7069549 catcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 7069450  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  7069449 ttaagttaactctcaca 7069433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 3320463 - 3320573
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3320463 catcgtggcacgaaatttccagtggcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 3320562  T
Q  289 ttaagttaact 299  Q
    |||||||||||    
T  3320563 ttaagttaact 3320573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 188 - 305
Target Start/End: Original strand, 8378832 - 8378949
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    ||||| || ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8378832 ccatcgtgccacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccaaatttctgat 8378931  T
Q  288 tttaagttaactctcaca 305  Q
    ||||||||||||||||||    
T  8378932 tttaagttaactctcaca 8378949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 7074556 - 7074440
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  7074556 catcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcacgatgcttctccatcgtggcacgatactccagatttctgatt 7074457  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  7074456 ttaagttaactctcaca 7074440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 25405162 - 25405046
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||||  ||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25405162 catcgtggcacgaaaaatccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 25405063  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  25405062 ttaagttaactctcaca 25405046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 3325211 - 3325321
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  3325211 catcgtggcacgaaatttccagtggcttcccaggaatcttgcttcaaccatcgtggtgcgatgcttctccatcgtggcacgatgcttcagatttctgatt 3325310  T
Q  289 ttaagttaact 299  Q
    |||||||||||    
T  3325311 ttaagttaact 3325321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 189 - 305
Target Start/End: Original strand, 44512941 - 44513057
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  44512941 catcgtggcacgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacaattctccagaattttgatt 44513040  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  44513041 ttaagttaactctcaca 44513057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 188 - 299
Target Start/End: Complemental strand, 25409920 - 25409809
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcc-caggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctga 286  Q
    ||||| |||||||||| |||||||||||||| ||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25409920 ccatcgtggcacgaaaattccagtagcttcctcagga-tcttcctccaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctga 25409822  T
Q  287 ttttaagttaact 299  Q
    |||||||||||||    
T  25409821 ttttaagttaact 25409809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 25351121 - 25351005
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcc-caggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    |||| |||||||||| |||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  25351121 catcgtggcacgaaaattccagtagcttcctcagga-tcttgctccaacaatcgtggcacgatgcttctccatcgtggcacgattctccaaatttctgat 25351023  T
Q  288 tttaagttaactctcaca 305  Q
    ||||||||||||| ||||    
T  25351022 tttaagttaactcccaca 25351005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 25356815 - 25356699
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcc-caggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    |||| |||||||||| |||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  25356815 catcgtggcacgaaaattccagtagcttcctcagga-tcttgctccaacaatcgtggcacgatgcttctccatcgtggcacgattctccaaatttctgat 25356717  T
Q  288 tttaagttaactctcaca 305  Q
    ||||||||||||| ||||    
T  25356716 tttaagttaactcccaca 25356699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 17611094 - 17611186
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| | |||||||||| |||||||    
T  17611094 tttttcttcgtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttca 17611186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 23425485 - 23425388
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||| | ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  23425485 taggttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcggtgctgtttgatttcccgtcttcttgcggtgttca 23425388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 22927978 - 22927886
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  22927978 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttca 22927886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 32522035 - 32521943
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||| |||| |||||| ||||||||    
T  32522035 tttttcttcgttatttcgccatctgagtgtggttgtgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttca 32521943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 45199140 - 45199048
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||||||||| |||||||| | |||||||||||||||||| ||||||||||||    
T  45199140 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgttttgtgcggcgctgtttgatttcccgtcttcttgcggtgttca 45199048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 6001985 - 6002082
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| ||| | || ||||||||||    
T  6001985 taggttttctctacgtgatttcgtcatctgagtgtggcggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttca 6002082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 35667345 - 35667248
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||  ||||||| |||||| ||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||    
T  35667345 taggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttca 35667248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 40946157 - 40946076
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctca 303  Q
    |||| ||||||||||||||||||| ||| |||||| ||||||||||||||||| |||| |||||||||||||||||||||||    
T  40946157 gaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaattctgattttaagttaactctca 40946076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 44144357 - 44144441
Alignment:
Q  224 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcacagga 308  Q
    |||||| ||||||||||||||| || || ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  44144357 atcttgtttcaacaatcgtggcacgttgtttctccatcgtggcacgtttctctagattcctgattttaagttaactctcacagga 44144441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 48207870 - 48207962
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||| | |||||||||||||||||||| | | |||||||||||||||||| ||||||||||||    
T  48207870 tttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgctgcgctgtttgatttcccgtcttcttgcggtgttca 48207962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 31235905 - 31235808
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||| ||| |||||||||||||||| ||||||| ||| |||||||||||||||||||| | ||||||||||||| ||| | |||||||||||||    
T  31235905 taggttttctctacgtgatttcgtcatctaagtgtggcggtttgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttca 31235808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 1448938 - 1448846
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| || |||||||| |||||| |||||||| || ||||||||||||| |||||||| ||||||||||||| |||||| ||||||||||||    
T  1448938 tttttatttgtgatttcatcatctaagtgtggttgtttgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttca 1448846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 1485365 - 1485273
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||| | |||||||| |||||| |||| ||||||| ||||    
T  1485365 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgttttcccatcttcttgcggtattca 1485273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 23085490 - 23085582
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||  |||||| ||||||||||| |||||||||||||| |||||||  ||||||| ||||||||||| ||||||||||||    
T  23085490 tttttctttgtgattttatcatctaagtgtggtggtttgttgttcgtcgtcatgtgcggcattgtttgctttcccgtcttcttgcggtgttca 23085582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 23786545 - 23786636
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||| | |||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||    
T  23786545 tttttctttgtgatt-catcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttca 23786636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 35496283 - 35496191
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||| ||||||||||||| ||||||| |||||||||| |  |||||||||||    
T  35496283 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttcatttcccgtcctcgtgcggtgttca 35496191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 42067169 - 42067077
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||  ||||||| |||||| |||||| |||| |||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  42067169 tttttctttctgatttcatcatctaagtgtgttggtttgttgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttca 42067077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 46818524 - 46818432
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||||||   |||||||||| ||||||||||||| ||| |||||||||||||||    
T  46818524 tttttcttcatgatttcgtcatccgagtgtggcggtgcgttgttcgaaatcttgtgcggcgttgtttgatttctcgtattgttgcggtgttca 46818432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 3394426 - 3394497
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||||| || |||||||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  3394426 ttttcttcgtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgatttc 3394497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 26583683 - 26583762
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||| ||||||||||||| |||||||||||||| |||||    
T  26583683 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgatttccagtctt 26583762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 6558849 - 6558938
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| |||||||| |||||| ||||||||||| |||||||||||||||||| ||  |||||| |||||||||||||  |||||||||||    
T  6558849 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacgacgttgttcgatttcccgtcttcgtgcggtgttca 6558938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 42408331 - 42408423
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||| | ||||||||||| |||||||||||||||||||| | |||||||||||| |||||||  |||||| ||||    
T  42408331 tttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattca 42408423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 46821984 - 46822076
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||| ||||| | ||||||||||| |||||||||| ||||||||||||||||||||  |||||||||||    
T  46821984 tttttctttgtaatttcatcatctaagtatggtgatttgttgttcgtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 46822076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 14627987 - 14627908
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||| | |||||||| |||||| ||||||||||| ||||||||||||| |||||||| ||||||||||||| ||||||    
T  14627987 tttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtattgtgcggcgttgtttgatttctcgtctt 14627908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 26492334 - 26492413
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| |||||||| |||||| ||||||||||| |||||| || |||||||||| | ||||||||||||||||||||    
T  26492334 tttttctttgtgatttcatcatctaagtgtggtggtttgttgtccgccgtcttgtgctgcgttgtttgatttcccgtctt 26492413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 969587 - 969497
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||||| || | ||| ||||| | |||||||||||||||||| ||||| ||||||||||||  |||||| ||||||||||    
T  969587 tttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtt 969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 20083302 - 20083399
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttg-----ttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||| |||||||| ||||| |||||| ||||||||||     || ||||||||||| |  |||||||||||||||||||||||||||||||||    
T  20083302 tttttcttcatgatttcgacatctaagtgtgatggtgtgttggttaatttgtcgtcttgtgagacgttgtttgatttcccgtcttgttgcggtgttca 20083399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 20116546 - 20116643
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||| |||||||| |||| |   |||||| || |||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||    
T  20116546 taggttttttctttgtgatttcatcatatacatgtggttgtttgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttca 20116643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 34773680 - 34773772
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||  |||||| ||||||||| | |||| ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||    
T  34773680 tttttctttgtaatttgatcatctaagtgtggtgatttgttattcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttca 34773772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 46339023 - 46339115
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||| | ||||||||| | |||||||||||||||||||||| |||||||||||| |||||||  | |||||||||    
T  46339023 tttttctttgtaatttcatcatttaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttca 46339115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 32684674 - 32684729
Alignment:
Q  60 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  32684674 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttca 32684729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 48457487 - 48457441
Alignment:
Q  259 atcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  48457487 atcgtggcacgattctccagaattctgattttaagttaactctcaca 48457441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 17499772 - 17499675
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||| | |||||||| |||||| ||||| ||||||| ||||||  |||||||||||   ||||||||||| ||||||||||||||| ||||    
T  17499772 taggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattttccgtcttgttgcggtattca 17499675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 17553442 - 17553539
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||| | |||||||| |||||| ||||| ||||||| ||||||  |||||||||||   ||||||||||| ||||||||||||||| ||||    
T  17553442 taggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattttccgtcttgttgcggtattca 17553539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 24069528 - 24069443
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||| || |||||||| || | |||||||||||| ||||||||||| ||| ||||||||  ||| ||||||||||||||    
T  24069528 ttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttc 24069443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 17223112 - 17223036
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||| |||||||| |||||||| |||||| ||||||||| | |||||||| ||||||||||||| || |||||||||    
T  17223112 taggttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcatcgtcttgtgcggcgtggtttgattt 17223036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 42311249 - 42311341
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||| | ||||||| ||| |||||||||||||||| ||| | |||||||||||| |||||||  |||| ||||||    
T  42311249 tttttctttgtgatttcatcatttaagtgtggcggtttgttgttcgtcgtcttatgcagcgttgtttgattttccgtcttcgtgcgatgttca 42311341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 35261268 - 35261319
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtct 74  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  35261268 tttttcttcgtgatttcgtcatccaagtgtggttgtgtgttgttcgtcgtct 35261319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 25068045 - 25068126
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||| ||||||||||| || | |||||||||||||| ||||||||||||| ||| ||||  | ||||||||||||||||    
T  25068045 gtgatttcatcatctgagtgcggcgttgtgttgttcgtcg-cttgtgcggtgtttttttattttgcatcttgttgcggtgttc 25068126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 28476180 - 28476246
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | |||||||||||||||||||||||| |||||||||||||    
T  28476180 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 28476246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 36143829 - 36143875
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttg 64  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||    
T  36143829 taggttttttcttcgtgatttcgtcgtctgagtgtggtggtgtgttg 36143875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 7640880 - 7640795
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcg 108  Q
    ||||| || |||||||| |||||| ||||||||||| ||||| |||||| |||||| || |||||||| |||||| |||| |||||    
T  7640880 tttttttttgtgatttcatcatctaagtgtggtggtttgttgctcgtcgccttgtgaggcgttgtttgctttcccatcttcttgcg 7640795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 22742891 - 22742963
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||| |||||||||||||| ||| |||  |  | |||||||||||||||||||||||| |||||||||||||    
T  22742891 ttttttttcgtgatttcgtcgtcttagttcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 22742963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 24350972 - 24350909
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||||| ||| |||| |  | |||||||||||||||||||||||| |||||||||||||    
T  24350972 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 24350909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 1100875 - 1100801
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttccc 97  Q
    ||||||||||||||||| || | ||| |  || | | |||||||| |||||||||||||||||||||||||||||    
T  1100875 tttttcttcgtgatttcatcgtatgaatccggcgatatgttgttcatcgtcttgtgcggtgttgtttgatttccc 1100801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 1749285 - 1749219
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | ||||||||||||||||||||||||  ||||||||||||    
T  1749285 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcattgtttgatttc 1749219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 2120638 - 2120592
Alignment:
Q  259 atcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||||    
T  2120638 atcgtggcgcgatactccagaattctgattttaagttaactctcaca 2120592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 35132900 - 35132966
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | |||||||||||||||||||| ||| |||||||||||||    
T  35132900 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgttcggcgttgtttgatttc 35132966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 3878370 - 3878321
Alignment:
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    |||||||| ||||||||| ||||  |||||||||||||||||||||||||    
T  3878370 ccatcgtgccacgattctgcagaaatctgattttaagttaactctcacag 3878321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 9450265 - 9450216
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  9450265 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcgg 9450216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 3224547 - 3224459
Alignment:
Q  26 ttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||| |||||||||| |||||| |  ||| |||||||||||| ||||||||||   || ||||||||| ||| |||||||| |||||    
T  3224547 ttcttcatgatttcgtcgtctgagggctgtgttgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttc 3224459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 21266360 - 21266416
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcg 80  Q
    |||||||  ||||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  21266360 ttttctttttgatttcatcatctaagtgtggtggtttgttattcgtcgtcttgtgcg 21266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 37837586 - 37837507
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||| |||||| |||| || | ||||||||||||||||||||||||    |||||||||  |||||||| |||||||||    
T  37837586 gtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgattttgcgtcttgtcgcggtgttc 37837507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 44311931 - 44311859
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||||||||||| || |||||||| |  | ||| |||||||||||||| ||||  |||||||||||||    
T  44311931 tttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgatttc 44311859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 45349927 - 45349848
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||| ||| ||||||| | ||||||||||||||| ||||   |||  |||||||||| |||||||| |||||||||    
T  45349927 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgttttgt---gtggcgtttgatttcgcgtcttgtcgcggtgttc 45349848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 5775172 - 5775247
Alignment:
Q  38 tcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||| |||||||| || | |||||||||| ||||||| |||||  || ||||||||| ||||||||||| |||||    
T  5775172 tcgtcgtctgagtgcggcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt 5775247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 25405215 - 25405180
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25405215 aaaatacgttttatttttatcttcagcgcgaccatc 25405180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 30756947 - 30756869
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    |||||||||| ||| |||| ||||||||    
T  30756947 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgttttgtcgcggtgtt 30756869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 115
Target Start/End: Original strand, 36143875 - 36143910
Alignment:
Q  80 ggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||| ||||||||||||||||||||    
T  36143875 ggtgttgtttgattttccgtcttgttgcggtgttca 36143910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 48930730 - 48930792
Alignment:
Q  33 tgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||| ||| |||| |  | |||||| ||||||||||||||||| |||||||||||||    
T  48930730 tgatttcgtcgtcttagtgcgacgttgtgttattcgtcgtcttgtgcggcgttgtttgatttc 48930792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 19296833 - 19296882
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  19296833 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 19296882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 25410009 - 25409964
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  25410009 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 25409964  T

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Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 30246848 - 30246803
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  30246848 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 30246803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 31482189 - 31482144
Alignment:
Q  69 tcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||| |||||| ||||||||||||||| |||||| |||||||||||    
T  31482189 tcgttttgtgctgtgttgtttgatttcacgtcttattgcggtgttc 31482144  T

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Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 34899735 - 34899686
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  34899735 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 34899686  T

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Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 39228978 - 39229027
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||  |||||||| | || ||||||||||||||||||||||||    
T  39228978 gtgatttcgttgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcgg 39229027  T

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Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 40837213 - 40837262
Alignment:
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    |||||||| ||||||||| ||||   ||||||||||||||||||||||||    
T  40837213 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacag 40837262  T

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Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 40993145 - 40993198
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgtt 85  Q
    ||||||||||| ||| |||| || | ||||||||||||| ||||||||||||||    
T  40993145 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggtgtt 40993198  T

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Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 41553568 - 41553483
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||||||  |||||||    | ||||||||||||||||||||| |  ||| ||||||||| |||||||||  |||||||    
T  41553568 ttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttc 41553483  T

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Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 41553913 - 41553828
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||||||  |||||||    | ||||||||||||||||||||| |  ||| ||||||||| |||||||||  |||||||    
T  41553913 ttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttc 41553828  T

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Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 41554258 - 41554173
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||||||  |||||||    | ||||||||||||||||||||| |  ||| ||||||||| |||||||||  |||||||    
T  41554258 ttcgtgatttcgtcgcctgagtgcaacgttgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttc 41554173  T

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Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 42978573 - 42978622
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  42978573 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 42978622  T

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Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 44512829 - 44512874
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  44512829 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 44512874  T

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Target: chr4 (Bit Score: 101; Significance: 1e-49; HSPs: 106)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 157 - 305
Target Start/End: Complemental strand, 15316778 - 15316630
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    |||||||||||||    |||| |||||||| ||||| |||||||||||||| ||||||||||   |||||||||||||||||||||| ||||||||||||    
T  15316778 aaaatacgttttaaaaatatcttcagcgcgtccatcgtggcacgaaatttctagtagcttcctcagaatcttgcttcaacaatcgtgacgcgatgcttct 15316679  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15316678 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 15316630  T

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Target: chr4; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 16489117 - 16489001
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    ||||||||||||||| ||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16489117 catcatggcacgaaaattccagtagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 16489018  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  16489017 ttaagttaactctcaca 16489001  T

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Target: chr4; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 31300190 - 31300074
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31300190 catcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgtgatgcttctccatcgtggcacgattctccagatttctgatt 31300091  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  31300090 ttaagttaactctcaca 31300074  T

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Target: chr4; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 174 - 305
Target Start/End: Complemental strand, 15312125 - 15311994
Alignment:
Q  174 tatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattc 273  Q
    |||| |||||||| ||||| | ||||||||||| |||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15312125 tatcttcagcgcgtccatcgttgcacgaaattttcagtagcttccttagaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggcacgattc 15312026  T
Q  274 tccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||||||||||||||    
T  15312025 tccagatttctgattttaagttaactctcaca 15311994  T

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Target: chr4; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 11853318 - 11853201
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11853318 catcgtggcacgaaatttccaatgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgatt 11853219  T
Q  289 ttaagttaactctcacag 306  Q
    ||||||||||||||||||    
T  11853218 ttaagttaactctcacag 11853201  T

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Target: chr4; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 40636984 - 40636867
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  40636984 catcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccaaaattctgatt 40636885  T
Q  289 ttaagttaactctcacag 306  Q
    ||||||||||||||||||    
T  40636884 ttaagttaactctcacag 40636867  T

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Target: chr4; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 188 - 306
Target Start/End: Complemental strand, 15830930 - 15830812
Alignment:
Q  188 ccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgat 287  Q
    ||||| |||||||||||||||||||||| ||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15830930 ccatcgtggcacgaaatttccagtagctccctcagaatcttgcttcaacaatcgtggcgtgatgcttctccatcgtggcacgattctccagatttctgat 15830831  T
Q  288 tttaagttaactctcacag 306  Q
    |||||||||||||| ||||    
T  15830830 tttaagttaactcttacag 15830812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 18586717 - 18586616
Alignment:
Q  204 tttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctca 303  Q
    |||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18586717 tttccagtagcttcctcagaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctca 18586618  T
Q  304 ca 305  Q
    ||    
T  18586617 ca 18586616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 189 - 305
Target Start/End: Complemental strand, 8529034 - 8528918
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||  |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  8529034 catcgtggcacgatttttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgacacgattctccagaaatctgatt 8528935  T
Q  289 ttaagttaactctcaca 305  Q
    |||||||||||||||||    
T  8528934 ttaagttaactctcaca 8528918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 2624479 - 2624567
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  2624479 tttttcttcgtgatttcgtcat--gagtgtggtggtgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtt 2624567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 4884614 - 4884531
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4884614 gaatcttgcttcaacaatcgtgacacgttgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 4884531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 407 - 627
Target Start/End: Complemental strand, 5989173 - 5988948
Alignment:
Q  407 ttgtagctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatcaacgaccttgacacaagtacatcaat 506  Q
    ||||||||||||||||||||| ||||| |||||||||  || |||  |||||| |||||||||   | |||||||| ||||||||||| |||| |||||     
T  5989173 ttgtagctaaatcatggatgaggttattcatttcaaagatttcttcttcatcatcaatagatcgccgttgtatcaatgaccttgacactagtatatcaa- 5989075  T
Q  507 taaagtatgcttctccaactttttcc---------tgatctgtggacgattctactaagccttctgcaatccacaactgaactaccatcnnnnnnnctaa 597  Q
       ||||| |||||||||||||||||         ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||       ||||    
T  5989074 ---agtattcttctccaactttttccaaacttgcatgatctgtggacgattctactaaaccttctgcaatccacaactgaactaccctcattttttctaa 5988978  T
Q  598 tatggacttcttcggaaaaattgaacaata 627  Q
     | ||||| ||| |||||||||||||||||    
T  5988977 gacggactcctttggaaaaattgaacaata 5988948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 868141 - 868235
Alignment:
Q  21 gatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  868141 gatttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttca 868235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 3336270 - 3336172
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg-tgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||  |||||||||||| || |||||||||||||||||    
T  3336270 taggttttttcttcgtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcggacgttgtttgattttccatcttgttgcggtgttca 3336172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 10359660 - 10359563
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||||||||||| |||||| ||||||||||| ||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||    
T  10359660 taggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgccgtcttttgcggtgttgtttgatttcccgtcttcttgtggtgttca 10359563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 18139026 - 18138929
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||| |||||||    
T  18139026 taggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttca 18138929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 35965088 - 35964991
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| || |||||||||||||||||||| ||| ||||||||    
T  35965088 taggtttttttttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttca 35964991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 49126239 - 49126142
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||| |||||||    
T  49126239 taggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttca 49126142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 4643839 - 4643931
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  4643839 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttca 4643931  T

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Target: chr4; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 25273864 - 25273956
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  25273864 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 25273956  T

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Target: chr4; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 46991238 - 46991146
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| |||||||| || || ||||||||||||||| |||||||||||||||||    
T  46991238 tttttcttcatgattttgtcatctgagtgtggtggtgtgttgtttgtcgtcttctgtggcgttgtttgatttcccatcttgttgcggtgttca 46991146  T

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Target: chr4; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 56194582 - 56194674
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  56194582 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttca 56194674  T

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Target: chr4; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 6764737 - 6764654
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  6764737 gaattttgcttcaacaatcgtggcacgaagcttctacatcgtggcacgattctccagaattctgattttaagttaactctcaca 6764654  T

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Target: chr4; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 8631879 - 8631958
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactct 301  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8631879 gaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactct 8631958  T

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Target: chr4; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 35261167 - 35261264
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||||||||||  |||||| ||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||| ||||||||||||    
T  35261167 taggttttttcttcgtgatttgatcatctaagtgtggtggtgtgttgtttgtcgtcttctgcggcgttgtttgattttccgtcttcttgcggtgttca 35261264  T

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Target: chr4; HSP #26
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 8009469 - 8009377
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  | |||||||||    
T  8009469 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcatacggtgttca 8009377  T

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Target: chr4; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 10389852 - 10389770
Alignment:
Q  33 tgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  10389852 tgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttca 10389770  T

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Target: chr4; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 27593935 - 27593845
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||   || |||||||||||||||| ||||| ||||    
T  27593935 tttttcttcgtgatttcgttatctgagtgtggtggtgtgttgttcgtcatcttgtgcgactttttttgatttcccgtctttttgcgatgtt 27593845  T

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Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 156 - 303
Target Start/End: Original strand, 2485244 - 2485390
Alignment:
Q  156 aaaaatacgttttatttttatcgtcag-cgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgctt 254  Q
    |||||||||||||||||||||| |||  ||| |||||| ||||||||  ||||||||   | | |  |||| ||||||||||||||||||| ||| ||||    
T  2485244 aaaaatacgttttatttttatcttcaatcgc-accatcgtggcacgatttttccagtgattgctccagaattttgcttcaacaatcgtggcacgaagctt 2485342  T
Q  255 ctccatcgtggcacgattctccagatttctgattttaagttaactctca 303  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  2485343 ctccatcgtggcacgattctcctga-atctgattttaagttaactctca 2485390  T

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Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 6972791 - 6972883
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||| |||| |||||||    
T  6972791 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcctgtcttcttgcagtgttca 6972883  T

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Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 9528985 - 9528893
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| |||||| |||| |||||||||||||||||||||| ||||||||||||||||||||  |||| ||||||    
T  9528985 tttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttca 9528893  T

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Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 29965616 - 29965708
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  29965616 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttca 29965708  T

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Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 53616758 - 53616666
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  53616758 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 53616666  T

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Target: chr4; HSP #34
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 51317961 - 51318056
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||| ||||||||  ||||||| |||||| ||||||||| | ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  51317961 taggttttttctttttgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgtt 51318056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 4556511 - 4556585
Alignment:
Q  231 ttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  4556511 ttcaacaatcgtggcatgttgcttctccatcgtggcacgattctccagttttcagattttaagttaactctcaca 4556585  T

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Target: chr4; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 31381780 - 31381690
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||| | |||||||||||| |||||||  |||||||||    
T  31381780 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgtt 31381690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 38706818 - 38706728
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||| | ||||||| ||||||||||||  |||||||||    
T  38706818 tttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgttgtttcatttcccgtcttcgtgcggtgtt 38706728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 227 - 305
Target Start/End: Complemental strand, 47868273 - 47868195
Alignment:
Q  227 ttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||| ||| | ||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  47868273 ttgcttcaacaatggtgacacgaagcttcttcatcgtggcacgattctccagaattctgattttaagttaactctcaca 47868195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 9645657 - 9645580
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtc 100  Q
    |||||||| | |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  9645657 tttttctttgcgatttcatcatctaagtgtggtggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtc 9645580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 37188702 - 37188610
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||| | ||||||||||| ||||||||||||| |||||||| | |||||||||||||| ||| ||||||||||||    
T  37188702 tttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgtcgttttgtgcggcgctgtttgatttcccgcctttttgcggtgttca 37188610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 43154122 - 43154030
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||  |||| | ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||  |||||||||||    
T  43154122 tttttctttgtgattttatcatttaagtgtggtggtttgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttca 43154030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 16689394 - 16689472
Alignment:
Q  226 cttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||| ||  ||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  16689394 cttgcttcaacaatcgcggaacga-gcttctccatcgtggcacgattctccagttttcagattttaagttaactctcaca 16689472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 25699482 - 25699401
Alignment:
Q  224 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||||| ||||||||||||||| || |||||||||||||||||||  |||| | |||| |||||||||||||||||||||||    
T  25699482 atcttgtttcaacaatcgtggcacgttgcttctccatcgtggcacatttcttctgattcctgattttaagttaactctcaca 25699401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 7050722 - 7050802
Alignment:
Q  225 tcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||| ||||||||||||||| || |||||||| ||||||||||| ||||||||||| ||||||||||| | |||||||||    
T  7050722 tcttgtttcaacaatcgtggcacgttgcttctctatcgtggcacgtttctccagattcctgattttaagctgactctcaca 7050802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 22300824 - 22300908
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||||||||| |||| ||| |  | |||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  22300824 ttcgtgatttcgtcgtctgtgtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtt 22300908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 43444374 - 43444466
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||||||||||||| |||||||||||| ||||||   |||||||||||    
T  43444374 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttca 43444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 18586792 - 18586741
Alignment:
Q  150 taactgaaaaatacgttttatttttatcgtcagcgcgaccatcatggcacga 201  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18586792 taactgaaaaatacgttttatttttatcttcagcgcgaccatcatggcacga 18586741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 1531889 - 1531979
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||  ||||||||||| || |||||||||||||| |||||  |||||||||    
T  1531889 tttttctttgtgatttcatcatctaagtgtggtggtttgttgtctgtcgtcttgtgtggcgttgtttgatttcctgtcttcgtgcggtgtt 1531979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 31359875 - 31359797
Alignment:
Q  35 atttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||  ||||| ||||||| ||||||||||| |||||    
T  31359875 atttcgtaatctgagtgtggtgttgtgttattcgtcgtcttgtgcgacgttgtatgatttcacgtcttgttgcagtgtt 31359797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 47417661 - 47417735
Alignment:
Q  41 tcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||| | ||||||| | |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  47417661 tcatctaaatgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 47417735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 1931829 - 1931732
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| |||||| | |||||||| |||||| ||||| ||||||||||||||  |||||||| ||   |||||| |||||||||||||||||||||||||    
T  1931829 taggttttttcattgtgatttcatcatctaagtgtagtggtgtgttgttcaccgtcttgtccgacattgtttcatttcccgtcttgttgcggtgttca 1931732  T

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Target: chr4; HSP #52
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 12265431 - 12265527
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||| ||| |||||||| ||||||||||||||| ||| |||||||||||||| ||||||| ||||||||||||| ||| | |||| ||||||||    
T  12265431 taggttttctctacgtgattttgtcatctgagtgtggcggtttgttgttcgtcgtc-tgtgcggcgttgtttgatttctcgtatcgttgtggtgttca 12265527  T

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Target: chr4; HSP #53
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 21090128 - 21090225
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||| ||||||||||||||||| |||||| | | ||||||| |||||||||||||||||| ||  ||||||||||||  ||| || ||||||||||||    
T  21090128 taggttttttcttcgtgatttcatcatctaaatatggtggtttgttgttcgtcgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttca 21090225  T

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Target: chr4; HSP #54
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 52944286 - 52944371
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||  |||||||| || | ||||||||||||||| |||||||| ||||||| ||||  ||||||||||||||||||    
T  52944286 ttcgtgatttcgtagtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttc 52944371  T

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Target: chr4; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 9283904 - 9283984
Alignment:
Q  35 atttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| |||||| ||||||||| | ||||||| ||||||||||| || ||||||||||||||||||||  |||||||||||    
T  9283904 atttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttca 9283984  T

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Target: chr4; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 14183784 - 14183875
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| ||||||||  ||||| ||||||||||| |||||||||| ||||||||| |||||||||||||| | |||||  |||||||||||    
T  14183784 tttttctttgtgatttcaccatctaagtgtggtggtttgttgttcgtagtcttgtgc-gtgttgtttgattttctgtcttcatgcggtgttca 14183875  T

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Target: chr4; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 20569248 - 20569328
Alignment:
Q  35 atttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| |||||| ||||||||| | |||||||||||||||| ||||| |||||||||||| |||||||  |||||||||||    
T  20569248 atttcatcatctaagtgtggtgatttgttgttcgtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttca 20569328  T

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Target: chr4; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 26086240 - 26086292
Alignment:
Q  253 ttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  26086240 ttctccatcgtggcacgattctctagaattctgattttaagttaactctcaca 26086292  T

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Target: chr4; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 32952856 - 32952766
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| ||||||||||||||| |||||| |||||||||||| |||||||| ||||| ||||||||||||  | ||||||| |||||||||    
T  32952856 tttttctttgtgatttcgtcatctaagtgtgttggtgtgttgtttgtcgtcttatgcgg-gttgtttgattt-tcatcttgttacggtgttca 32952766  T

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Target: chr4; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 34024550 - 34024454
Alignment:
Q  18 taggatttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||| ||||||||  ||||||| |||||| ||||||||||| ||||||||||||||||||  |  |||||||||||| || |||| |||||||||||    
T  34024550 taggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtatgacgttgtttgattttccatcttcttgcggtgttc 34024454  T

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Target: chr4; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 44947393 - 44947485
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| | |||| ||||||||||| ||||| | || ||||||||||| ||||||||||||||||||||  || ||||||||    
T  44947393 tttttctttgtgatttcattatctaagtgtggtggtttgttggttgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttca 44947485  T

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Target: chr4; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 49410232 - 49410296
Alignment:
Q  51 gtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||||  |||||||||||    
T  49410232 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttca 49410296  T

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Target: chr4; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 51888351 - 51888260
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||| |||||||||||||  |||||||| || | |||||||||| ||||||| ||||  ||||||||||||| | ||||||||||||||||    
T  51888351 ttttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttc 51888260  T

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Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 50766617 - 50766528
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| || ||||| |||||| ||||||||| | |||||||||||   |||||||| ||||||||||||||||||||  |||||||||||    
T  50766617 tttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtc---ttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttca 50766528  T

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Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 36204525 - 36204432
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgc-ggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||||||||||||||| ||| |||| || | |||||||||||||||| ||| | || ||||||||||||| | | |||||||||||||||    
T  36204525 tttttcttcgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttca 36204432  T

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Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 18048863 - 18048943
Alignment:
Q  34 gatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||| || || |||| ||||||||| ||||||||||| || ||||||||||||  || |||||||||||||||    
T  18048863 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttc 18048943  T

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Target: chr4; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 49680522 - 49680601
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    |||||||| || ||||| |||||| ||||||||| | |||| ||||||||||||||  ||||||||||||||| ||||||    
T  49680522 tttttctttgtaatttcatcatctaagtgtggtgatttgttattcgtcgtcttgtgttgtgttgtttgatttcacgtctt 49680601  T

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Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 27651915 - 27651981
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| ||||    | ||||||||||||||||||||||||||||||||||||||    
T  27651915 ttcgtgatttcgtcgtcttagtgcaacgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 27651981  T

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Target: chr4; HSP #69
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 28857380 - 28857462
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||| || ||| |||| || | |||||||||||| ||||||||||| ||||||||||| | ||||| ||||||||||||    
T  28857380 gtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttc 28857462  T

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Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 37683880 - 37683950
Alignment:
Q  44 tctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||| || | |||||||||| ||||||||||  | ||||||||||||| ||||||||||||||||||    
T  37683880 tctgagtgcggcgttgtgttgttcatcgtcttgtgtagagttgtttgatttcgcgtcttgttgcggtgttc 37683950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 45228124 - 45228070
Alignment:
Q  48 agtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtctt 102  Q
    ||||||||||| ||||||||| ||||||||||||| |||||| ||||||||||||    
T  45228124 agtgtggtggtttgttgttcgccgtcttgtgcggtattgtttaatttcccgtctt 45228070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 52204465 - 52204380
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||||||||||| ||||||||  | || |||||||||||||||||| |   |||||||||||  ||||||||| ||||||||    
T  52204465 ttcgtgatttcgtcatttgagtgtgacgttgagttgttcgtcgtcttgtgtgacattgtttgattttgcgtcttgttacggtgttc 52204380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 2115695 - 2115624
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||| || ||||| |||||| ||||||||| | ||||||| |||||||||||| |||||||||||||||    
T  2115695 tttttctttgtaatttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgc-gtgttgtttgatttc 2115624  T

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Target: chr4; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 816
Target Start/End: Complemental strand, 5988848 - 5988756
Alignment:
Q  724 cacataattccagtcattttgggaccatttggagcgaagaaaagccccaagtgctactgcagctaatggtaatccatcacacttttttgcaat 816  Q
    ||||||||||||||||||| ||||| | ||||  || |||| |||||| | |  || ||||||| |||||||||||||||| |||||||||||    
T  5988848 cacataattccagtcatttggggacaaattggtacggagaagagccccgacttttattgcagctgatggtaatccatcacatttttttgcaat 5988756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 56156770 - 56156691
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||   |||  |||||||||| |||||||| |||||||||    
T  56156770 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgt---gtggcgtttgatttcgcgtcttgtcgcggtgttc 56156691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 32766495 - 32766573
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| |||| ||||||||||||||||||||||||    |||||||||| ||| |||| ||||||||    
T  32766495 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcgg---cgtttgatttcgcgttttgtcgcggtgtt 32766573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 52098023 - 52097950
Alignment:
Q  27 tcttcgtgatttcgtcatctgagtgtggtggtg---tgttgttcgtcgtcttgtgcggtgttgtttgatttccc 97  Q
    |||||||||||| |||||| |||||||||||||   ||||||| || ||||||||| | |||||||||||||||    
T  52098023 tcttcgtgattttgtcatccgagtgtggtggtggtgtgttgtttgttgtcttgtgcagagttgtttgatttccc 52097950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 6155359 - 6155294
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| |||||||| |||| ||||||| ||||| |||||||||  |||||||||||||    
T  6155359 ttcgtgatttcgtcgtctgagtgcggtgttgtgttg-tcgtcatcttgtgcgtcgttgtttgatttc 6155294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 36194680 - 36194746
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||  ||| |||| |  | |||||||||||||||||||||||| |||||||||||||    
T  36194680 ttcgtgatttcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 36194746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 52934078 - 52933996
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtg 111  Q
    ||||| ||||| || |||||||| || | ||||||||||||| | |||||| | ||||||||||||| | |||||||||||||    
T  52934078 ttcgttatttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtg 52933996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 4142883 - 4142802
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||| ||| |||| || | |||||||||||||||||||||||| |  ||||||||||  || |||| ||||||||    
T  4142883 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtt 4142802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 11300119 - 11300039
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||| ||| |||| |||| ||||||||||||||||||||||      |||||||||| |||||||| ||||||||||    
T  11300119 gtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgc---aacgtttgatttcgcgtcttgtcgcggtgttca 11300039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 33332705 - 33332628
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttg 106  Q
    |||||||||||||| |||| ||| || | ||||||||| |||| ||||||||  ||||||||||||| | ||||||||    
T  33332705 ttcgtgatttcgtcgtctgtgtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttg 33332628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 43853446 - 43853499
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtg 111  Q
    |||||||||| || |||||||||| ||||||||||||| ||| |||||||||||    
T  43853446 tgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtg 43853499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 9048672 - 9048724
Alignment:
Q  62 ttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||| |||||||||||||| ||||| |||||||  |||||||||||||||||    
T  9048672 ttgtttgtcgtcttgtgcggcgttgtctgatttcgggtcttgttgcggtgttc 9048724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 9643392 - 9643448
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||||||||||| |||  ||||||||||||| | ||||||||| ||||||    
T  9643392 tgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttc 9643448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 16631143 - 16631068
Alignment:
Q  230 cttcaacaatcgtggcgcgatgcttctccatcgtggcacgattct-ccagatttctgattttaagttaactctcaca 305  Q
    |||||||||||||||| || |||||||  |||||||||||||| | |||||   |||||||||||||||||||||||    
T  16631143 cttcaacaatcgtggcacgttgcttctgaatcgtggcacgatttttccagaac-ctgattttaagttaactctcaca 16631068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 21554916 - 21554824
Alignment:
Q  24 ttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtctt-gtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||| ||||||||||  |||||||| ||||  |||||||||||| |||| |||| |  |||||||||||| |||||||||| | ||||||    
T  21554916 ttttctttgtgatttcgttgtctgagtgaggtgacgtgttgttcgtcatcttagtgccgcattgtttgatttctcgtcttgttgtgatgttca 21554824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 94
Target Start/End: Complemental strand, 47320496 - 47320460
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgattt 94  Q
    |||||||||||||||||||||||| ||||||||||||    
T  47320496 tgtgttgttcgtcgtcttgtgcggcgttgtttgattt 47320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 192
Target Start/End: Complemental strand, 11853371 - 11853336
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatc 192  Q
    ||||||||||||||||||||| ||||||||||||||    
T  11853371 aaaatacgttttatttttatcttcagcgcgaccatc 11853336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 271 - 305
Target Start/End: Complemental strand, 4569757 - 4569723
Alignment:
Q  271 ttctccagatttctgattttaagttaactctcaca 305  Q
    ||||||||||| |||||||||||||||||||||||    
T  4569757 ttctccagattcctgattttaagttaactctcaca 4569723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 5989287 - 5989237
Alignment:
Q  329 acaacttatcaaattcattaaatgaatcatatagccctctattgtaggaca 379  Q
    |||| |||| ||||| ||||||||| |||||||||||||||||||| ||||    
T  5989287 acaatttatgaaatttattaaatgagtcatatagccctctattgtatgaca 5989237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 7941181 - 7941131
Alignment:
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcacagg 307  Q
    |||||||| ||||||||| ||||   |||||||||||||||||||||||||    
T  7941181 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcacagg 7941131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 31891425 - 31891359
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | |||||||||||||||||||||  | |||||||||||||    
T  31891425 ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgtagcgttgtttgatttc 31891359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 35348279 - 35348337
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||| || ||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  35348279 tttttttttgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 35348337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 36161690 - 36161771
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||| || |||||||| || | ||| |||||||| ||||||||||  ||||||||||||  ||| ||||||||||||||    
T  36161690 gtgatttcttcgtctgagtgcgg-gttgttttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcggtgttc 36161771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 37089866 - 37089916
Alignment:
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcacagg 307  Q
    |||||||| ||||||||| ||||  |||||||||||||||||||| |||||    
T  37089866 ccatcgtgccacgattctgcagaaatctgattttaagttaactcttacagg 37089916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 42032615 - 42032577
Alignment:
Q  69 tcgtcttgtgcggtgttgtttgatttcccgtcttgttgc 107  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  42032615 tcgtcttgtgcgatgttgtttgatttcgcgtcttgttgc 42032577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 9145991 - 9145954
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  9145991 tgtgttgttcgtcgtcttgtgcggcattgtttgatttc 9145954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 15312200 - 15312155
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  15312200 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 15312155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 15831019 - 15830974
Alignment:
Q  114 caaggcttctatttatagtg-aaagtaaacccttaaataactgaaa 158  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||    
T  15831019 caaggcttatatttatagtggaaagtaaacccttaaaaaactgaaa 15830974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 22038907 - 22038854
Alignment:
Q  58 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtg 111  Q
    ||||||||||||| | ||||| || ||||||||||||| |||||||||| ||||    
T  22038907 tgtgttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtg 22038854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 22611164 - 22611213
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  22611164 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 22611213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 26633799 - 26633750
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 81  Q
    ||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  26633799 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgg 26633750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 35395798 - 35395741
Alignment:
Q  35 atttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgat 92  Q
    |||||||| |||||||| || | |||||||||||||||||||| ||  ||||||||||    
T  35395798 atttcgtcgtctgagtgcggcgttgtgttgttcgtcgtcttgttcgacgttgtttgat 35395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 37030242 - 37030287
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgt 77  Q
    |||||||||||||||||||  || | ||||||||||||||||||||    
T  37030242 gtgatttcgtcatctgagtacggcgttgtgttgttcgtcgtcttgt 37030287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 100; Significance: 5e-49; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 157 - 288
Target Start/End: Complemental strand, 224641 - 224510
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| ||| ||||| |||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  224641 aaaatacgttttatttttatcttcaacgcgatcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttct 224542  T
Q  257 ccatcgtggcacgattctccagatttctgatt 288  Q
    ||||||||||||||| ||||||||||||||||    
T  224541 ccatcgtggcacgatactccagatttctgatt 224510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 97; Significance: 3e-47; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 157 - 305
Target Start/End: Original strand, 188605 - 188753
Alignment:
Q  157 aaaatacgttttatttttatcgtcagcgcgaccatcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttct 256  Q
    ||||||||||||||||||||| ||||||   ||||| |||||||||||||| ||||| ||||    ||||||||||||||||||||||||||||||||||    
T  188605 aaaatacgttttatttttatcttcagcgatgccatcgtggcacgaaatttctagtagtttcctcataatcttgcttcaacaatcgtggcgcgatgcttct 188704  T
Q  257 ccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  188705 ccatcgtagcacgattctccagatttctaattttaagttaactctcaca 188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 92; Significance: 3e-44; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 396 - 645
Target Start/End: Original strand, 4281 - 4526
Alignment:
Q  396 agatgaaaattttgtagctaaatcatggatgaagttatgcatttcaaattttactttctcatcaccaatagatctttgatgtatcaacgaccttgacaca 495  Q
    ||||||||  ||| |||||||||||||||  | ||||||||||||||| ||| ||| | ||||||||||||||| | |||||||||| |||||||||||     
T  4281 agatgaaacctttatagctaaatcatggaccaggttatgcatttcaaagtttgcttccccatcaccaatagatcgtcgatgtatcaatgaccttgacact 4380  T
Q  496 agtacatcaattaaagtatgcttctccaactttttcctgatctgtggacgattctactaagccttctgcaatccacaactgaactaccatcnnnnnnnct 595  Q
    | |||| |    ||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||  ||         ||    
T  4381 aatacagc----aaagtattcttctccaactttttcctggtttgtggacgattttactaagccttctgcaatccacaactgaactgtcaaatttttttct 4476  T
Q  596 aatatggacttcttcggaaaaattgaacaataatcaaaacaccgttttaa 645  Q
    |  ||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  4477 atgatggacttctttggaaaaattgaacaatactcaaagcatcgttttaa 4526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 721 - 800
Target Start/End: Original strand, 4605 - 4684
Alignment:
Q  721 tagcacataattccagtcattttgggaccatttggagcgaagaaaagccccaagtgctactgcagctaatggtaatccat 800  Q
    ||||||||||||||||| || | ||||| |||| | || ||||| | ||||||||||||||||||| |||||| ||||||    
T  4605 tagcacataattccagtaatctagggacaatttagtgcaaagaatatccccaagtgctactgcagcaaatggtgatccat 4684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 91; Significance: 1e-43; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 30909 - 30795
Alignment:
Q  189 catcatggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgatt 288  Q
    |||| ||||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  30909 catcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcctggcgcgatgcttctccatcgtggcacgatgctccagatttctgatt 30810  T
Q  289 ttaagttaactctca 303  Q
    |||||||||||||||    
T  30809 ttaagttaactctca 30795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 30969 - 30918
Alignment:
Q  150 taactgaaaaatacgttttatttttatcgtcagcgcgaccatcatggcacga 201  Q
    |||||||||||||| ||||||||||||| ||| |||||||||| ||||||||    
T  30969 taactgaaaaatacattttatttttatcttcaacgcgaccatcgtggcacga 30918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 1266 - 1349
Alignment:
Q  222 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcaca 305  Q
    |||| ||||||||||||||||||| ||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  1266 gaattttgcttcaacaatcgtggcacgaagcttctacatcgtggcacgattctccagaattctgattttaagttaactctcaca 1349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 453901 - 453993
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||||||||||| || ||| |||| |||||||||||||||||||||| |||| |||||||||||| | ||||||||||||||||||    
T  453901 tttttcttcgtgatttcgttatttgattgtgatggtgtgttgttcgtcgtcttgggcggcgttgtttgattttcagtcttgttgcggtgttca 453993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 41944 - 42023
Alignment:
Q  227 ttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcacag 306  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  41944 ttgctccaacaatcgtggcacgaagcttctccatcgtggcacgattcttcagaattctgattttaagttaactctcacag 42023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 5367 - 5459
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||| | |||||| |||| |||||||||||||||||||||| |||||||| ||||||||||| ||| ||||||||    
T  5367 tttttctttgtgatttcatcatttaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttca 5459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 5988 - 6071
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||| ||||||||   || |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  5988 gtgatttcgtcgtctgagtgcaatgatgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttca 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 6293 - 6366
Alignment:
Q  42 catctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||| ||||||||||| |||||||||||||||||| |||  ||||||||||||||||||| ||||||||||||    
T  6293 catcttagtgtggtggtttgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttca 6366  T

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Target: scaffold0264 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 34 - 115
Target Start/End: Complemental strand, 20493 - 20412
Alignment:
Q  34 gatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||  |||||||||||| |||| || ||||||||||||    
T  20493 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattttccgttttcttgcggtgttca 20412  T

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Target: scaffold0014 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 201480 - 201388
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| |||||| |||| |||||||||| ||||||||||| | ||||||||||| |||||| ||| ||||||||    
T  201480 tttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgtagtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttca 201388  T

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Target: scaffold0003 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 361898 - 361815
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||| | ||| ||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||    
T  361898 gtgatttcatcatttaagtatggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcctgtcttggtgcagtgttca 361815  T

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Target: scaffold0127 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 15452 - 15531
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgtt 113  Q
    ||||||||||||||| |||| |||| |||||||||||||||||||||||| ||  ||||||||| |||||||| ||||||||    
T  15452 gtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtt 15531  T

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Target: scaffold0042 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 92627 - 92545
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    ||||||||||| |||||||||| || ||||||| ||  ||||||||||| |||||||||||||| |||||||||| |||||||    
T  92627 gtgatttcgtcgtctgagtgtgttgttgtgttgctcaccgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttc 92545  T

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Target: scaffold0146 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 16428 - 16359
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgat 92  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||| |||||||||||||| ||||||||||    
T  16428 tttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgat 16359  T

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Target: scaffold0022 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 83543 - 83454
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    |||||||| |||||||| |||||| ||||||||||| ||||||   | ||||||||||| ||||||||||||| ||||||  |||||| ||||    
T  83543 tttttctttgtgatttcatcatctaagtgtggtggtttgttgt---ttgtcttgtgcggcgttgtttgatttctcgtcttcgtgcggtattca 83454  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 120609 - 120568
Alignment:
Q  265 gcacgattctccagatttctgattttaagttaactctcacag 306  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  120609 gcacgatactccagatttctgattttaagttaactctcacag 120568  T

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Target: scaffold0113 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 36795 - 36723
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    ||||||||| |||||| ||  | |||||||  || |||||||||||||||||||||||| |||||||||||||    
T  36795 tttttcttcatgatttggttgtgtgagtgtcttgttgtgttgttcgtcgtcttgtgcggagttgtttgatttc 36723  T

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Target: scaffold0267 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 816
Target Start/End: Complemental strand, 19033 - 18927
Alignment:
Q  710 atgttactgtgtagcacataattccagtcattttgggaccatttggagcgaagaaaagccccaagtgctactgcagctaatggtaatccatcacactttt 809  Q
    |||||||| | ||| |||| |||||||||||  || |||  ||||| ||| |||| | ||||||||||||| |||||||| ||||| |||||||| ||||    
T  19033 atgttactttttagtacatcattccagtcatcctgtgacagtttggtgcggagaagacccccaagtgctacagcagctaacggtaaaccatcacattttt 18934  T
Q  810 ttgcaat 816  Q
    | |||||    
T  18933 tggcaat 18927  T

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Target: scaffold0445 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 1305 - 1384
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttc 114  Q
    |||||||| || ||| |||| || | ||||||||||||||||||||| || |||   ||||||| ||||||||||||||||||    
T  1305 gtgatttcttcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgttgcggtgttc 1384  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 93055 - 93147
Alignment:
Q  23 tttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgat-ttcccgtcttgttgcggtgttc 114  Q
    |||||| || |||||||||| ||||||||  | | ||||||||| || ||||||||||| |||||||||| |||  ||||||||| |||||||    
T  93055 tttttcctcatgatttcgtcgtctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttc 93147  T

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Target: scaffold0888 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 1816 - 1750
Alignment:
Q  29 ttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttc 95  Q
    |||||||||||||| ||| |||| |  | | |||||||||||||||||| ||| |||||||||||||    
T  1816 ttcgtgatttcgtcgtcttagtgcgacgttctgttgttcgtcgtcttgtccggcgttgtttgatttc 1750  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 10170 - 10090
Alignment:
Q  32 gtgatttcgtcatctgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttgttgcggtgttca 115  Q
    ||||||||||| ||| |||| ||   ||| ||||||||||||||||||||    |||||||||| |||||||| ||||||||||    
T  10170 gtgatttcgtcgtctaagtgcggctttgttttgttcgtcgtcttgtgcgg---cgtttgatttcgcgtcttgtcgcggtgttca 10090  T

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