View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5623_low_1 (Length: 515)

Name: NF5623_low_1
Description: NF5623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5623_low_1
NF5623_low_1
[»] chr8 (25 HSPs)
chr8 (20-507)||(4630161-4630646)
chr8 (331-507)||(19176659-19176841)
chr8 (341-507)||(13224645-13224816)
chr8 (340-507)||(12571866-12572040)
chr8 (340-504)||(41681137-41681306)
chr8 (338-507)||(33328159-33328334)
chr8 (340-507)||(9930026-9930199)
chr8 (340-507)||(31133223-31133396)
chr8 (340-507)||(44831614-44831787)
chr8 (340-505)||(11656458-11656630)
chr8 (340-507)||(9178005-9178177)
chr8 (427-505)||(33743290-33743368)
chr8 (340-491)||(13225023-13225181)
chr8 (340-491)||(44831250-44831408)
chr8 (340-490)||(31133605-31133762)
chr8 (340-427)||(9928912-9928999)
chr8 (340-427)||(11336977-11337064)
chr8 (340-427)||(19176293-19176380)
chr8 (338-457)||(12572270-12572395)
chr8 (340-457)||(11656876-11656999)
chr8 (340-457)||(34540967-34541090)
chr8 (333-469)||(10918122-10918264)
chr8 (340-427)||(41681589-41681676)
chr8 (340-491)||(33742925-33743082)
chr8 (427-469)||(43958281-43958323)
[»] chr7 (26 HSPs)
chr7 (340-507)||(19590528-19590701)
chr7 (338-507)||(19830421-19830596)
chr7 (340-507)||(37786770-37786943)
chr7 (338-507)||(29100220-29100395)
chr7 (338-507)||(4641441-4641616)
chr7 (340-505)||(35289272-35289443)
chr7 (340-507)||(38858646-38858819)
chr7 (340-505)||(2659211-2659382)
chr7 (338-500)||(4478076-4478244)
chr7 (340-505)||(32004985-32005156)
chr7 (340-505)||(34534162-34534333)
chr7 (343-500)||(23953105-23953268)
chr7 (340-473)||(28583442-28583581)
chr7 (340-491)||(19590909-19591067)
chr7 (340-491)||(38859025-38859183)
chr7 (340-490)||(32004617-32004774)
chr7 (331-469)||(38160945-38161089)
chr7 (340-469)||(28584329-28584464)
chr7 (340-491)||(34533794-34533952)
chr7 (340-427)||(35288906-35288993)
chr7 (340-489)||(37787153-37787309)
chr7 (340-491)||(2658842-2659000)
chr7 (340-427)||(19830874-19830961)
chr7 (340-427)||(4641899-4641983)
chr7 (340-427)||(23952733-23952821)
chr7 (350-457)||(29099863-29099976)
[»] chr3 (47 HSPs)
chr3 (338-507)||(5136981-5137156)
chr3 (340-507)||(23644465-23644638)
chr3 (340-507)||(24300925-24301098)
chr3 (340-507)||(25853596-25853769)
chr3 (340-507)||(39555946-39556119)
chr3 (340-505)||(20840563-20840734)
chr3 (338-507)||(41046701-41046876)
chr3 (340-507)||(27393946-27394119)
chr3 (340-507)||(31779021-31779194)
chr3 (340-507)||(30104485-30104657)
chr3 (340-507)||(37726932-37727105)
chr3 (343-486)||(48452995-48453144)
chr3 (340-500)||(43973444-43973610)
chr3 (340-505)||(32535330-32535505)
chr3 (331-507)||(26274936-26275117)
chr3 (340-507)||(26837725-26837897)
chr3 (341-507)||(22425182-22425354)
chr3 (340-507)||(17464860-17465034)
chr3 (338-469)||(25612384-25612521)
chr3 (338-457)||(32534960-32535085)
chr3 (340-491)||(20840945-20841103)
chr3 (340-491)||(37727314-37727472)
chr3 (340-475)||(25420542-25420683)
chr3 (340-491)||(27393664-27393822)
chr3 (340-491)||(39555581-39555739)
chr3 (340-491)||(43973824-43973982)
chr3 (331-493)||(29801798-29801967)
chr3 (340-457)||(23644884-23645007)
chr3 (340-491)||(4275748-4275906)
chr3 (340-491)||(22424817-22424975)
chr3 (340-427)||(25853237-25853324)
chr3 (340-491)||(31778656-31778814)
chr3 (338-427)||(26274568-26274657)
chr3 (338-491)||(41047083-41047241)
chr3 (447-507)||(29801532-29801592)
chr3 (340-423)||(29801359-29801442)
chr3 (340-407)||(51473431-51473498)
chr3 (338-427)||(24300558-24300646)
chr3 (338-491)||(26837361-26837521)
chr3 (340-457)||(17464494-17464617)
chr3 (340-469)||(50116816-50116951)
chr3 (340-407)||(37222046-37222113)
chr3 (461-508)||(49407925-49407972)
chr3 (461-507)||(55192247-55192293)
chr3 (340-457)||(30098182-30098305)
chr3 (340-427)||(5137436-5137523)
chr3 (461-507)||(37075818-37075864)
[»] chr1 (38 HSPs)
chr1 (340-500)||(5540194-5540360)
chr1 (340-500)||(29306956-29307122)
chr1 (340-507)||(50970647-50970820)
chr1 (340-507)||(18984122-18984295)
chr1 (338-507)||(5962947-5963122)
chr1 (340-507)||(29869623-29869796)
chr1 (338-507)||(15173097-15173272)
chr1 (340-507)||(21856412-21856585)
chr1 (340-507)||(33144288-33144461)
chr1 (168-277)||(48513199-48513303)
chr1 (340-500)||(15646571-15646737)
chr1 (340-507)||(8678911-8679083)
chr1 (340-507)||(17433219-17433392)
chr1 (340-505)||(26859431-26859601)
chr1 (340-507)||(9018976-9019149)
chr1 (340-507)||(39154022-39154195)
chr1 (340-500)||(29307317-29307484)
chr1 (427-505)||(4636068-4636146)
chr1 (335-427)||(5539814-5539906)
chr1 (340-491)||(21856045-21856203)
chr1 (340-457)||(18984538-18984661)
chr1 (105-166)||(48513114-48513173)
chr1 (340-493)||(17433597-17433757)
chr1 (340-489)||(50970281-50970437)
chr1 (335-427)||(8678539-8678631)
chr1 (340-457)||(29870038-29870161)
chr1 (340-469)||(52268293-52268428)
chr1 (345-427)||(33143925-33144007)
chr1 (340-457)||(39154439-39154562)
chr1 (340-427)||(4636426-4636513)
chr1 (340-491)||(15173478-15173635)
chr1 (340-491)||(15646195-15646353)
chr1 (340-427)||(26859062-26859149)
chr1 (340-500)||(9019338-9019505)
chr1 (20-96)||(48513001-48513080)
chr1 (340-388)||(47826967-47827015)
chr1 (340-423)||(2733416-2733499)
chr1 (467-507)||(17088286-17088326)
[»] chr2 (35 HSPs)
chr2 (340-507)||(239356-239528)
chr2 (338-505)||(11090522-11090695)
chr2 (340-507)||(18451200-18451373)
chr2 (340-507)||(40027143-40027316)
chr2 (340-507)||(43058336-43058509)
chr2 (333-507)||(40815714-40815894)
chr2 (340-507)||(22374323-22374496)
chr2 (339-500)||(8425736-8425903)
chr2 (340-507)||(1978111-1978284)
chr2 (338-504)||(14432143-14432315)
chr2 (338-507)||(3025467-3025641)
chr2 (340-507)||(26538100-26538273)
chr2 (340-505)||(28616616-28616788)
chr2 (340-500)||(26538454-26538621)
chr2 (340-505)||(7446345-7446519)
chr2 (340-469)||(35781070-35781205)
chr2 (340-491)||(22374709-22374867)
chr2 (331-491)||(43058717-43058883)
chr2 (340-469)||(20444752-20444887)
chr2 (340-427)||(1978564-1978651)
chr2 (340-491)||(7446730-7446888)
chr2 (338-457)||(40027559-40027684)
chr2 (340-469)||(35779711-35779846)
chr2 (339-490)||(8425357-8425514)
chr2 (344-427)||(239807-239890)
chr2 (340-427)||(11090975-11091062)
chr2 (340-427)||(18450833-18450920)
chr2 (340-427)||(28617069-28617156)
chr2 (340-491)||(40815348-40815506)
chr2 (340-469)||(15551502-15551637)
chr2 (340-491)||(14432525-14432683)
chr2 (340-427)||(28847150-28847237)
chr2 (340-490)||(3025848-3026003)
chr2 (340-469)||(20440439-20440573)
chr2 (461-507)||(28143400-28143446)
[»] scaffold0295 (2 HSPs)
scaffold0295 (340-507)||(4796-4969)
scaffold0295 (340-427)||(5246-5333)
[»] chr6 (32 HSPs)
chr6 (340-507)||(10900299-10900472)
chr6 (340-507)||(20741103-20741276)
chr6 (340-507)||(11276951-11277124)
chr6 (340-507)||(18257140-18257313)
chr6 (340-507)||(15828010-15828183)
chr6 (340-505)||(12935528-12935699)
chr6 (340-507)||(23074002-23074164)
chr6 (331-507)||(28472631-28472812)
chr6 (331-507)||(29859820-29860001)
chr6 (340-507)||(11444990-11445163)
chr6 (333-507)||(31470685-31470865)
chr6 (338-507)||(2322588-2322762)
chr6 (340-505)||(1149802-1149974)
chr6 (340-507)||(18505288-18505461)
chr6 (339-500)||(10899941-10900109)
chr6 (340-491)||(2319675-2319832)
chr6 (340-491)||(11445371-11445529)
chr6 (340-491)||(12935160-12935318)
chr6 (340-491)||(23075512-23075670)
chr6 (340-494)||(4811375-4811535)
chr6 (340-491)||(31470318-31470476)
chr6 (338-427)||(18504920-18505009)
chr6 (340-427)||(22219808-22219895)
chr6 (340-425)||(1149468-1149553)
chr6 (340-469)||(29033437-29033573)
chr6 (340-457)||(4811675-4811798)
chr6 (338-467)||(3835135-3835270)
chr6 (340-428)||(18257591-18257679)
chr6 (340-427)||(20741559-20741646)
chr6 (340-404)||(15827641-15827705)
chr6 (427-500)||(11276686-11276760)
chr6 (461-506)||(35163557-35163602)
[»] chr5 (36 HSPs)
chr5 (340-507)||(2865124-2865297)
chr5 (340-507)||(8460933-8461106)
chr5 (340-507)||(8647441-8647614)
chr5 (340-507)||(18183338-18183511)
chr5 (340-507)||(5819298-5819471)
chr5 (340-507)||(19359139-19359312)
chr5 (340-507)||(24362205-24362378)
chr5 (340-507)||(164560-164733)
chr5 (340-507)||(15708974-15709146)
chr5 (340-507)||(29455111-29455284)
chr5 (340-507)||(16018592-16018763)
chr5 (333-507)||(15372242-15372422)
chr5 (340-503)||(14215616-14215785)
chr5 (340-507)||(24331929-24332106)
chr5 (338-491)||(18182971-18183131)
chr5 (356-507)||(25000109-25000266)
chr5 (340-469)||(7349424-7349559)
chr5 (338-491)||(5818930-5819090)
chr5 (340-493)||(25000471-25000631)
chr5 (340-496)||(14463901-14464062)
chr5 (340-427)||(19359591-19359678)
chr5 (340-491)||(24331562-24331722)
chr5 (427-491)||(24361933-24361997)
chr5 (340-491)||(2864757-2864915)
chr5 (340-427)||(4623151-4623238)
chr5 (340-427)||(8461386-8461473)
chr5 (340-427)||(8647893-8647980)
chr5 (338-493)||(16018969-16019131)
chr5 (340-473)||(4219666-4219804)
chr5 (427-491)||(24325308-24325372)
chr5 (340-427)||(15371874-15371960)
chr5 (340-427)||(29454743-29454830)
chr5 (340-490)||(164194-164350)
chr5 (340-407)||(4222197-4222264)
chr5 (448-507)||(24325580-24325639)
chr5 (371-469)||(4624632-4624736)
[»] chr4 (53 HSPs)
chr4 (340-507)||(15523603-15523776)
chr4 (340-507)||(46193774-46193947)
chr4 (340-507)||(33109687-33109860)
chr4 (340-507)||(4219560-4219733)
chr4 (340-507)||(11153516-11153689)
chr4 (340-501)||(25447611-25447778)
chr4 (340-507)||(22170306-22170478)
chr4 (332-507)||(22434547-22434726)
chr4 (340-500)||(38962195-38962361)
chr4 (340-507)||(12234332-12234505)
chr4 (340-507)||(25937673-25937846)
chr4 (340-507)||(23494446-23494619)
chr4 (340-507)||(48526199-48526371)
chr4 (340-507)||(51020800-51020973)
chr4 (338-507)||(2118665-2118839)
chr4 (338-507)||(54995437-54995611)
chr4 (427-507)||(12503805-12503885)
chr4 (338-507)||(45082433-45082606)
chr4 (340-493)||(46193408-46193568)
chr4 (442-507)||(18751971-18752036)
chr4 (340-469)||(48293597-48293732)
chr4 (340-427)||(25938126-25938213)
chr4 (340-457)||(51021215-51021337)
chr4 (340-428)||(15523238-15523326)
chr4 (340-491)||(22434182-22434340)
chr4 (340-427)||(23494898-23494985)
chr4 (340-491)||(25447250-25447408)
chr4 (338-491)||(48526565-48526725)
chr4 (338-491)||(54995070-54995230)
chr4 (340-457)||(2118296-2118419)
chr4 (340-491)||(11153149-11153307)
chr4 (340-491)||(12234713-12234871)
chr4 (340-491)||(45082808-45082966)
chr4 (333-491)||(4219943-4220108)
chr4 (359-472)||(43281195-43281313)
chr4 (340-457)||(33109883-33110006)
chr4 (340-469)||(44892555-44892690)
chr4 (340-407)||(18763995-18764062)
chr4 (338-469)||(48713753-48713890)
chr4 (338-491)||(18751600-18751760)
chr4 (340-469)||(48294949-48295085)
chr4 (338-467)||(16690937-16691072)
chr4 (340-491)||(20470895-20471053)
chr4 (340-387)||(35363096-35363143)
chr4 (340-406)||(10258363-10258429)
chr4 (340-409)||(16318249-16318318)
chr4 (471-507)||(17504329-17504365)
chr4 (340-469)||(20958268-20958401)
chr4 (471-507)||(35193447-35193483)
chr4 (477-507)||(17504119-17504149)
chr4 (477-507)||(40160239-40160269)
chr4 (427-469)||(44890613-44890655)
chr4 (427-472)||(20957285-20957330)
[»] scaffold0273 (1 HSPs)
scaffold0273 (340-507)||(4576-4749)
[»] scaffold1223 (2 HSPs)
scaffold1223 (340-507)||(756-928)
scaffold1223 (340-500)||(1116-1283)
[»] scaffold0951 (2 HSPs)
scaffold0951 (340-505)||(1670-1841)
scaffold0951 (340-491)||(2051-2209)
[»] scaffold0019 (1 HSPs)
scaffold0019 (331-507)||(134042-134224)
[»] scaffold0007 (3 HSPs)
scaffold0007 (340-507)||(64305-64478)
scaffold0007 (338-427)||(64760-64849)
scaffold0007 (461-507)||(205738-205784)
[»] scaffold0432 (1 HSPs)
scaffold0432 (340-507)||(10242-10414)
[»] scaffold0417 (2 HSPs)
scaffold0417 (359-507)||(10643-10797)
scaffold0417 (340-457)||(11042-11165)
[»] scaffold0157 (1 HSPs)
scaffold0157 (427-507)||(16592-16672)
[»] scaffold0027 (2 HSPs)
scaffold0027 (331-507)||(42528-42709)
scaffold0027 (338-500)||(42170-42339)
[»] scaffold0176 (2 HSPs)
scaffold0176 (343-498)||(18841-19001)
scaffold0176 (340-427)||(19076-19163)
[»] scaffold1585 (1 HSPs)
scaffold1585 (340-427)||(570-657)
[»] scaffold0057 (2 HSPs)
scaffold0057 (338-390)||(61950-62002)
scaffold0057 (340-391)||(61031-61082)
[»] scaffold0113 (1 HSPs)
scaffold0113 (341-457)||(28662-28784)
[»] scaffold0168 (1 HSPs)
scaffold0168 (427-469)||(7695-7737)
[»] scaffold0076 (1 HSPs)
scaffold0076 (338-427)||(8464-8553)


Alignment Details
Target: chr8 (Bit Score: 461; Significance: 0; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 461; E-Value: 0
Query Start/End: Original strand, 20 - 507
Target Start/End: Complemental strand, 4630646 - 4630161
Alignment:
Q  20 agggtccacttgatggacaatactgagtattattaccttactgaaaatgttgacattgagcaaagtcttgtttgtgatgacatagtaagattataattgt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4630646 agggtccacttgatggacaatactgagtattattaccttactgaaaatgttgacattgagcaaagtcttgtttgtgatgacatagtgagattataattgt 4630547  T
Q  120 gtatgagcgttatttcagggggacggagataacaatgtcaatgtcaacgaagaagtgaagaatgatttcaggagcagaggtttgtgtttgatccctgttg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4630546 gtatgagcgttatttcagggggacggagataacaatgtcaatgtcaacgaagaagtgaagaatgatttcaggagcagaggtttgtgtttgatccctgttg 4630447  T
Q  220 tgttggatgcaccttacacgtggcacgtagtaacggtgctgatttttggtcacctgctgcgaacaatgtttcaccctcaactattgctaagcagtagtat 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  4630446 tgttggatgcaccttacacgtggcacgtagtaacggtgctgatttttggtcacctgct--gaacaatgtttcaccctcaactattgctaagcagtagtat 4630349  T
Q  320 aaattaatgagtatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtcct 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  4630348 aaattaatgagtatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtcct 4630249  T
Q  420 tcaattattgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4630248 tcaattattgttgcatttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 19176841 - 19176659
Alignment:
Q  331 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 427  Q
    |||||| | ||||||||||||||| || ||||||||||| ||||||||| || ||||||||   ||||||||||||| | ||| |||||||||||||       
T  19176841 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 19176742  T
Q  428 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
       ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  19176741 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 341 - 507
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  341 taattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgca 434  Q
    |||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | |||| ||||||||||||      ||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  435 tttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 12571866 - 12572040
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||| ||    ||||||||||||| | ||| ||| |||||||||      ||||||    
T  12571866 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12571965  T
Q  434 atttttcatccta-ccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  12571966 atttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 340 - 504
Target Start/End: Original strand, 41681137 - 41681306
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  41681137 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681236  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctat 504  Q
    ||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||| || ||||||||||    
T  41681237 atttttcgtcctacccc-cattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 33328159 - 33328334
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| || || ||   ||||||||||||| | ||| ||||||||| |||      ||||    
T  33328159 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 33328258  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| |||||||| | ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  33328259 gcatttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 9930199 - 9930026
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || |||| |||||| |||||||||||| ||||||||   |||||||| |||| | ||  ||||||||| |||      ||||||    
T  9930199 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgttgc 9930100  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||||    
T  9930099 atttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 31133223 - 31133396
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||  |||||||||||| |||||| |   |||||||||| || | ||||||||||||| |||      ||||||    
T  31133223 ttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttgc 31133322  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||| | ||||||    
T  31133323 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 44831787 - 44831614
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||| ||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| ||  |||||||||      ||||||    
T  44831787 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttgc 44831688  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||  ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  44831687 atttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 505
Target Start/End: Original strand, 11656458 - 11656630
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||| ||| | ||| ||||||||||||      |||||||    
T  11656458 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttgc 11656557  T
Q  434 atttttcatcctaccccccattttattctcc-aaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||| ||||    
T  11656558 atttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 9178177 - 9178005
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || || ||   | ||||||||||| | ||| ||||||||| |||      ||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 9178078  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||| ||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||| ||||||||    
T  9178077 atttttcatcttaccccc-attttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 427 - 505
Target Start/End: Complemental strand, 33743368 - 33743290
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| |||||||    
T  33743368 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 13225181 - 13225023
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  13225181 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 13225082  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  13225081 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 44831250 - 44831408
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || || |||||||| |||||||||||||||||||||   ||||||||||||| | ||| ||||||| ||||      |||||||    
T  44831250 ttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 44831349  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||| ||||||||    
T  44831350 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 490
Target Start/End: Complemental strand, 31133762 - 31133605
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 31133663  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 490  Q
    ||||||| || |||| || ||||| |  ||||| ||||||||| ||||||| ||||||    
T  31133662 atttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 9928912 - 9928999
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 9928999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 11337064 - 11336977
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || |||||||||||  |||||||||||||||||| |   ||||||||||||||| ||| ||| |||||||||    
T  11337064 ttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattat 11336977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 19176293 - 19176380
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| | ||||||   ||||||||||||| | ||| |||||||||||||    
T  19176293 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattat 19176380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 457
Target Start/End: Complemental strand, 12572395 - 12572270
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| | ||| ||   ||||||||||||| | ||| ||||||||||||      |||||    
T  12572395 gtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgtt 12572296  T
Q  432 gcatttttcatcctaccccccatttt 457  Q
    ||||||||| ||||||| || |||||    
T  12572295 gcatttttcgtcctacctcctatttt 12572270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 11656999 - 11656876
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||| |   ||||||||||||| | ||  ||||||||||||      |||||||    
T  11656999 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 11656900  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  11656899 atttttcgtcctacctcctatttt 11656876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 34541090 - 34540967
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   |||||||||| || | ||  ||||||||||||      |||||||    
T  34541090 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 34540991  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  34540990 atttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 469
Target Start/End: Original strand, 10918122 - 10918264
Alignment:
Q  333 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat----- 427  Q
    |||| ||||||||||| ||||  || ||||||||||  |||||||||||||||||| ||  |  ||||||||||  | ||  ||||||||| |||         
T  10918122 tttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcattt 10918221  T
Q  428 -tgttgcatttttcatcctaccccccattttattctccaaaaa 469  Q
     |||||||||||||||| ||||||||||||||| |||||||||    
T  10918222 ttgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 41681676 - 41681589
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| |||||||    ||||||||||||| | ||| |||||||||||||    
T  41681676 ttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattat 41681589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 33742925 - 33743082
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||| ||   ||||||||||||| | ||| ||| ||||||||      ||| |||    
T  33742925 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaaca-aacggtctttcaattatcatttttgatgc 33743023  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| || | ||| ||| ||||| |||||||||||||||    
T  33743024 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 469
Target Start/End: Original strand, 43958281 - 43958323
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaa 469  Q
    |||||||||||||| |||||||| | |||||||||||||||||    
T  43958281 ttgttgcatttttcgtcctaccctctattttattctccaaaaa 43958323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 1e-48; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 19590528 - 19590701
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590627  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  19590628 atttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 19830421 - 19830596
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||    
T  19830421 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 19830520  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  19830521 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 37786770 - 37786943
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   |||||||||| || | ||| |||||||||||||      ||||||    
T  37786770 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 37786869  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  37786870 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 507
Target Start/End: Complemental strand, 29100395 - 29100220
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||| ||||||||||||   ||||||||||||| | ||| ||| |||||||||      ||||    
T  29100395 gtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgtt 29100296  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||  |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  29100295 gcattttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 4641441 - 4641616
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || |||||||||||  ||||||||||| ||||||||   |||| ||||| || | ||| ||| |||||||||      ||||    
T  4641441 gtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgtt 4641540  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  4641541 gcatttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 340 - 505
Target Start/End: Complemental strand, 35289443 - 35289272
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      | |||||    
T  35289443 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgc 35289344  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||| || ||||||||||||||||||| ||||| ||||| |||| | ||||||||||||||||||||||    
T  35289343 atttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 38858646 - 38858819
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||| ||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  38858646 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 38858745  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  38858746 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 340 - 505
Target Start/End: Complemental strand, 2659382 - 2659211
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || ||| ||||||| ||| ||| |||| ||||| ||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  2659382 ttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2659283  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  2659282 atttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 338 - 500
Target Start/End: Complemental strand, 4478244 - 4478076
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||   |||||||||||||||  |  |||||||||||||      ||||    
T  4478244 gtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgtt 4478145  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||||| || || ||| |||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  4478144 gcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 340 - 505
Target Start/End: Complemental strand, 32005156 - 32004985
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || || ||||||||  ||||||||||| ||||| ||   |||||||| |||| | ||| |||||| ||||||      ||||||    
T  32005156 ttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgc 32005057  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  32005056 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 340 - 505
Target Start/End: Complemental strand, 34534333 - 34534162
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||| ||||||| |  ||||||||||| |||||||||||| || |||||    |||||||||||| | ||| |||||||||||||      ||||||    
T  34534333 ttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttgc 34534234  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||| ||||||    
T  34534233 atttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 343 - 500
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  343 attacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgcatt 436  Q
    |||||| ||||| || ||||||||||  |||||||||||| |||||| |   ||| ||||||||| | ||| |||||||||||||      |||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  437 tttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    |||| || ||||||||||||||||||||||||| ||||| |||| |||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 340 - 473
Target Start/End: Original strand, 28583442 - 28583581
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||||| || |||||| |||   |||||||||| |||| ||| ||||||||||||      || ||||    
T  28583442 ttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattgc 28583541  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgca 473  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  28583542 atttttcgtcctaccccccattttatcctccaaaaatgca 28583581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 19591067 - 19590909
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| |  ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  19591067 ttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590968  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  19590967 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 38859183 - 38859025
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||| ||||||| ||||      |||||||    
T  38859183 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 38859084  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||| ||||||||    
T  38859083 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 490
Target Start/End: Original strand, 32004617 - 32004774
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||| |||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  32004617 ttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 32004716  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 490  Q
    |||||||  |||||| || ||||| |  ||||| ||| ||||| ||||||||||||||    
T  32004717 atttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 331 - 469
Target Start/End: Original strand, 38160945 - 38161089
Alignment:
Q  331 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta---- 426  Q
    |||||| | ||||||||||||||| || ||| ||||||| |||||||||||| |  |||||   ||||||||||||| | ||  ||||||||||||        
T  38160945 tatttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattat 38161044  T
Q  427 --ttgttgcatttttcatcctaccccccattttattctccaaaaa 469  Q
      |||||||||||||| |||||| ||||||||||| |||||||||    
T  38161045 ttttgttgcatttttcgtcctactccccattttatcctccaaaaa 38161089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 469
Target Start/End: Complemental strand, 28584464 - 28584329
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||  || ||||| ||||| ||| |||||||||||||| |||  ||||||||||||| | ||  ||||||||||||      ||||||     
T  28584464 ttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttgt 28584365  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    ||||||| || ||||||||||||||| |||||||||    
T  28584364 atttttcgtcttaccccccattttatcctccaaaaa 28584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 34533794 - 34533952
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||||| ||  ||| ||||||||      |||||||    
T  34533794 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttgc 34533893  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||| | ||||||| || ||||| |  ||||||||| ||||| |||||||| ||||||    
T  34533894 attttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 35288906 - 35288993
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| ||||||| |||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||||    
T  35288906 ttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattat 35288993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 489
Target Start/End: Complemental strand, 37787309 - 37787153
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||| ||||||| || ||||||||||| |||||||||||| ||||||||   ||||||| ||||| | ||| || |||||||||      |||||||    
T  37787309 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttgc 37787210  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttt 489  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||    
T  37787209 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 2658842 - 2659000
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||  || ||||||||||| |||||||||||| ||||||||   |||||||| |||| | ||  ||||||||||||      |||||||    
T  2658842 ttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 2658941  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| || |||| || ||||| |  ||||||||| ||||| ||||| |||||||||    
T  2658942 atttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 19830961 - 19830874
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||| ||| |||||||||  |||||||||| || | ||| || ||||||||||    
T  19830961 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattat 19830874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 4641983 - 4641899
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| ||||||||   | |||||||||  ||||||||||||| | ||| |||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattat 4641899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 23952733 - 23952821
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggc-tactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||  | ||||||||||||||||| ||   ||||||||||||| | ||| |||||||||||||    
T  23952733 ttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattat 23952821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 457
Target Start/End: Original strand, 29099863 - 29099976
Alignment:
Q  350 ttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgcatttttcatc 443  Q
    ||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| ||||||||||||      |||||||||||||| ||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  444 ctaccccccatttt 457  Q
    ||||| || |||||    
T  29099963 ctacctcctatttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 5136981 - 5137156
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| | |||||||||||||||| ||   ||||||||||||| | ||| |||||||||||||      ||||    
T  5136981 gtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5137080  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  5137081 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 23644465 - 23644638
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || |||| |||||| |||||||||||||||||||||   ||||||||||||| | |||||||||||||||||      ||||||    
T  23644465 ttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgttgc 23644564  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| | ||||||||||||||||||||||||    
T  23644565 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 24301098 - 24300925
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   |||||||||| || | ||| ||||||| | |||      ||||||    
T  24301098 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttgc 24300999  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  24300998 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 25853769 - 25853596
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    |||||||||||||||||| ||||||||||  |||||||||||| ||||| |||  ||||||||||||| | ||  |||||||||||||      ||||||    
T  25853769 ttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 25853670  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  25853669 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 39556119 - 39555946
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt------gttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||||       |||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgc 39556020  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  39556019 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 340 - 505
Target Start/End: Original strand, 20840563 - 20840734
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||  ||||||||| |||| | ||| |||||||||||||      ||||||    
T  20840563 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 20840662  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||| |||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||    
T  20840663 atttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 41046701 - 41046876
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| ||| | |||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||    
T  41046701 gtttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 41046800  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  41046801 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 27394119 - 27393946
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||||||||||| |||||||  |||||||||||||| | |||  ||||||||||||      ||||||    
T  27394119 ttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 27394020  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||| |||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||| ||||||    
T  27394019 attttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 31779194 - 31779021
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  31779194 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31779095  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||| |||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||    
T  31779094 atttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 30104485 - 30104657
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||  |||||||||||||||||||||   |||||||||| |||| ||| |||||||||||||      ||||||    
T  30104485 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttgc 30104584  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||||||||| ||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||    
T  30104585 atttttcgtcctacccc-cattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 37726932 - 37727105
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| || || |||||| |||| |||   |||||||||| || | ||| |||||||||||||      ||||||    
T  37726932 ttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 37727031  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  37727032 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 343 - 486
Target Start/End: Original strand, 48452995 - 48453144
Alignment:
Q  343 attacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgcatt 436  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      ||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  437 tttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagt 486  Q
    |||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  48453095 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 340 - 500
Target Start/End: Original strand, 43973444 - 43973610
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||  |||||||||||| || |  ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  43973444 ttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43973543  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  43973544 atttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 340 - 505
Target Start/End: Complemental strand, 32535505 - 32535330
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat-----------t 428  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||           |    
T  32535505 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaattttt 32535406  T
Q  429 gttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  32535405 gttgcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 26275117 - 26274936
Alignment:
Q  331 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 427  Q
    |||||| ||||||||| | |||||  | | ||||||||  |||||||||||| |||||||    ||||||||||||||| ||| |||| ||||||||       
T  26275117 tatttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcat 26275018  T
Q  428 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
       |||||| |||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  26275017 ttttgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 26837897 - 26837725
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| |||| |||   ||| |||| |||| | ||| ||| ||||| |||      ||||||    
T  26837897 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttgc 26837799  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  26837798 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 341 - 507
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  341 taattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgca 434  Q
    |||||||||||||| || |||||||| || |||||||||||  ||||| ||   || |||||||||| | ||| || ||||||||||      |||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  435 tttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||| | | ||||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 17465034 - 17464860
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || ||||||||||| |||| || |||| |||||      |||||||| |||| | ||| |||||||||||||      ||||||    
T  17465034 ttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 17464935  T
Q  434 atttttca-tcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||   |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  17464934 atttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 338 - 469
Target Start/End: Complemental strand, 25612521 - 25612384
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||| || ||||||||||  |||||||||||||||||||||   |||||||| |||| | ||| ||| || |||||      |||||    
T  25612521 gtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgtt 25612422  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaa 469  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  25612421 gcatttttcgtcctaccccccattttatcctccaaaaa 25612384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 338 - 457
Target Start/End: Original strand, 32534960 - 32535085
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||| || |||||||||||  ||||||||||||||||||||  |||||||||||||| | ||| ||||||||||||      |||||    
T  32534960 gtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 32535059  T
Q  432 gcatttttcatcctaccccccatttt 457  Q
    ||||||||| ||||||| || |||||    
T  32535060 gcatttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 20841103 - 20840945
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| |  ||||||||||| |||||||||||| ||||||||  |||||||||||||| | ||| ||||||||||||      |||||||    
T  20841103 ttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 20841004  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  20841003 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 37727472 - 37727314
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || || |||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  37727472 ttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 37727373  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  37727372 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 475
Target Start/End: Complemental strand, 25420683 - 25420542
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||| ||  |   |||||||| |||||| ||  ||||||||||||      |||||||    
T  25420683 ttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttgc 25420584  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcaga 475  Q
    ||||||| || ||||||||||||||| || ||||||||||||    
T  25420583 atttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 27393664 - 27393822
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||  |||||||| ||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  27393664 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 27393763  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| |||||||||| ||||| |  | ||| ||| ||||| |||||||||||||||    
T  27393764 atttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 39555581 - 39555739
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  39555581 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 39555680  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| | ||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  39555681 atttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 43973982 - 43973824
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||| |||   ||||||||||||| | ||| ||| ||||||||      |||||||    
T  43973982 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 43973883  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| || | ||| ||| ||||| |||||||||||||||    
T  43973882 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 493
Target Start/End: Complemental strand, 29801967 - 29801798
Alignment:
Q  331 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta---- 426  Q
    |||||| | |||||||||||||||||| |||| |||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| ||||||||        
T  29801967 tatttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcat 29801868  T
Q  427 --ttgttgcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagac 493  Q
      |||||||||||||| ||| ||| || ||||| |  ||||| ||| ||||| |||||||| ||||||||    
T  29801867 ttttgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 23645007 - 23644884
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||| ||||||| || ||||||||||| ||||||||||||||||||||    ||||||||||||| | ||| ||| ||||||||      |||||||    
T  23645007 ttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 23644908  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||||||||||| || |||||    
T  23644907 atttttcatcctacctcctatttt 23644884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 4275906 - 4275748
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||| |||||      |||||||    
T  4275906 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4275807  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  4275806 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 22424817 - 22424975
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| |  ||||||||  | ||||| |||||| |||| ||||  ||||||||||||| | ||| ||||||||||||      |||||||    
T  22424817 ttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22424916  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||||||||| |||||||||||||||    
T  22424917 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 25853237 - 25853324
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||| ||   |||||||| |||| | ||| |||||||||||||    
T  25853237 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattat 25853324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 31778656 - 31778814
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttc------aattattgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| ||||||||   ||||||||||||| | ||| |||||||       ||| |||||||    
T  31778656 ttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgttgc 31778755  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  31778756 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 427
Target Start/End: Original strand, 26274568 - 26274657
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||| |||||||| | || |||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  26274568 gtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 26274657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 491
Target Start/End: Complemental strand, 41047241 - 41047083
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||| | || || |||||||| |||||||||||| |||| ||||  ||||||||||||||| ||| ||||||||||||      |||||    
T  41047241 gtttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatcatttttgtt 41047144  T
Q  432 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  41047143 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 447 - 507
Target Start/End: Original strand, 29801532 - 29801592
Alignment:
Q  447 ccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||| |||| | ||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 423
Target Start/End: Original strand, 29801359 - 29801442
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaa 423  Q
    ||||||||||||||| ||||||||||||||  ||||||| ||| ||||||||   ||||||||||||| | ||| |||||||||    
T  29801359 ttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 29801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 407
Target Start/End: Original strand, 51473431 - 51473498
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaa 407  Q
    ||||||||||||||| || ||||||||||| ||| |||||||||||||||||   |||||||||||||    
T  51473431 ttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaa 51473498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 427
Target Start/End: Original strand, 24300558 - 24300646
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||| ||||| || |||||||||||  || |||||||| |||||||||  ||||||||||||||| ||| || ||||||||||    
T  24300558 gtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattat 24300646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 491
Target Start/End: Original strand, 26837361 - 26837521
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||| ||||| || | || |||||| |||||||||||||||||||||   ||||| |||| ||   ||| ||||||||||||      |||||    
T  26837361 gtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgtt 26837460  T
Q  432 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  26837461 gcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 17464494 - 17464617
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||| || ||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  17464494 ttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17464593  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  17464594 atttttcgtcctacctcctatttt 17464617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 469
Target Start/End: Complemental strand, 50116951 - 50116816
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 433  Q
    |||||||||||||||||| ||||||||||   ||||||||||||||||| ||   |||| ||| |||| | ||| ||| ||||      ||| |||||||    
T  50116951 ttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgc 50116852  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    | ||||| |||||||||||||||| | |||||||||    
T  50116851 aattttcgtcctaccccccattttttcctccaaaaa 50116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 37222113 - 37222046
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaa 407  Q
    ||||||||||||||| || ||||||||||  |||||||| ||||||||||||   |||||||||||||    
T  37222113 ttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaa 37222046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 461 - 508
Target Start/End: Original strand, 49407925 - 49407972
Alignment:
Q  461 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgcta 508  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  49407925 ctccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 507
Target Start/End: Original strand, 55192247 - 55192293
Alignment:
Q  461 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  55192247 ctccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 30098305 - 30098182
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||   ||||||||||| ||||| ||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  30098305 ttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 30098206  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  30098205 atttttcgtcctacctcctatttt 30098182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 5137523 - 5137436
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| |||| |||   |||||||| |||| | ||  |||||||||||||    
T  5137523 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattat 5137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 507
Target Start/End: Original strand, 37075818 - 37075864
Alignment:
Q  461 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||| ||| ||||| ||||||| |||||||||||||||||||||||    
T  37075818 ctccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 7e-47; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 340 - 500
Target Start/End: Complemental strand, 5540360 - 5540194
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||||||  ||||||||||||| | ||| |||||||||||||      ||||||    
T  5540360 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgttgc 5540261  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  5540260 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 340 - 500
Target Start/End: Original strand, 29306956 - 29307122
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| |||  ||||||||||||| | ||| |||||||||||||      ||||||    
T  29306956 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307055  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  29307056 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 50970820 - 50970647
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  50970820 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 50970721  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  50970720 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 18984122 - 18984295
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  18984122 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984221  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||||||||    
T  18984222 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 507
Target Start/End: Complemental strand, 5963122 - 5962947
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| || || ||   |||||||| |||| | ||||||| |||||||||      ||||    
T  5963122 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgtt 5963023  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  5963022 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 29869623 - 29869796
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt------gttgc 433  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||||      |||||    
T  29869623 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 29869722  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  29869723 atttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 15173097 - 15173272
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| | ||||||   ||||||||  ||| | ||| || ||||||||||      ||||    
T  15173097 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgtt 15173196  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  15173197 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 21856585 - 21856412
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| || |||||  |||||||||||||| | ||| ||||||||| |||      || |||    
T  21856585 ttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgc 21856486  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  21856485 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 33144461 - 33144288
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  | ||||||| |||      ||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgc 33144362  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  33144361 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 48513199 - 48513303
Alignment:
Q  168 gaagaagtgaagaatgatttcaggagcagaggtttgtgtttgatccctgttgtgttggatgcaccttacacgtggcacgtagtaacggtgctgatttttg 267  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||     ||||||||||||||||||||| ||||||||||||||||||||||    
T  48513199 gaagaagtgaagaatgatttgaggagcagaggtttgtgtttgatccctgtt-----ggatgcaccttacacgtggcaagtagtaacggtgctgatttttg 48513293  T
Q  268 gtcacctgct 277  Q
    ||||||||||    
T  48513294 gtcacctgct 48513303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 340 - 500
Target Start/End: Complemental strand, 15646737 - 15646571
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || ||||    ||||||||||||| | ||| |||||||||||||      ||||||    
T  15646737 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15646638  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  15646637 atttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 8679083 - 8678911
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||||||| || ||||||||   ||||||||||||| | ||  ||| |||||||||      ||||||    
T  8679083 ttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttgc 8678984  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8678983 atttttcgtcctacctcc-attttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 17433219 - 17433392
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || || |||||||| ||||||| |||| ||  | ||   ||||||||||||| | ||| ||||||||| |||      ||||||    
T  17433219 ttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 17433318  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  17433319 atttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 340 - 505
Target Start/End: Complemental strand, 26859601 - 26859431
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    |||||||||||||||||| |||||||||||||||||||||||| |  |||||   ||||||||||||| |  || |||||||||||||      ||||||    
T  26859601 ttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttgc 26859502  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||| ||||||||||||||| |||||||||||| ||||| |||| | ||||||||||||||| ||||||    
T  26859501 atttttcgtcctaccccccattt-attctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 9018976 - 9019149
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| |||| |||   ||||||||||||| | ||| ||| ||||| |||      ||||||    
T  9018976 ttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttgc 9019075  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| | | ||||||| ||||||||||||||    
T  9019076 atttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 39154022 - 39154195
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| ||||| ||||||||  ||||||||||| || || ||   ||||||||||||| | ||| ||||| |||||||      ||||||    
T  39154022 ttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgc 39154121  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||| ||||||||||||| ||| | |||||||||||||||||| | ||||||||||    
T  39154122 atttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 340 - 500
Target Start/End: Complemental strand, 29307484 - 29307317
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    |||||| |||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  29307484 ttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307385  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||||||||||||||||||||||    
T  29307384 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 427 - 505
Target Start/End: Original strand, 4636068 - 4636146
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    |||||||||||||  | ||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  4636068 ttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctaccccctatg 4636146  T

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Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 5539814 - 5539906
Alignment:
Q  335 tatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    |||| ||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||| |||||||||||||    
T  5539814 tatgcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattat 5539906  T

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Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 21856045 - 21856203
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  21856045 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 21856144  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||||||| | || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  21856145 atttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

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Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 18984661 - 18984538
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || | ||||||||| |||||||||||||||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  18984661 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984562  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  18984561 atttttcgtcctacctcctatttt 18984538  T

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Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 48513114 - 48513173
Alignment:
Q  105 taagattataattgtgtatgagcgttatttcagggggacggagataacaatgtcaatgtcaa 166  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  48513114 taagattataattgtgtatg--cgttatttcagggggacggagataacaatgtcaatatcaa 48513173  T

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Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 493
Target Start/End: Complemental strand, 17433757 - 17433597
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||| ||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  17433757 ttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17433658  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagac 493  Q
    ||||||| ||||||| || ||||| |  || || ||| ||||| |||||||||||||||||    
T  17433657 atttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

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Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 489
Target Start/End: Original strand, 50970281 - 50970437
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||| ||||| | ||| ||||||||||||      |||||||    
T  50970281 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttgc 50970380  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttt 489  Q
    ||||||| |||||||  | ||||| |  ||||| ||| ||||| |||||||||||||    
T  50970381 atttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

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Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 427
Target Start/End: Original strand, 8678539 - 8678631
Alignment:
Q  335 tatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    |||| ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   |||||||||| || | ||| |||||||||||||    
T  8678539 tatgcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattat 8678631  T

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Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 29870161 - 29870038
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29870062  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  29870061 atttttcgtcctacctcctatttt 29870038  T

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Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 469
Target Start/End: Original strand, 52268293 - 52268428
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 433  Q
    ||||||||||||||| || |||| |||||| || ||||||||||||||||||   ||||||||||||| | ||| ||| ||||      ||| |||||||    
T  52268293 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttgttgc 52268392  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    | ||||| |||||||||||||||| | |||||||||    
T  52268393 acttttcgtcctaccccccattttttcctccaaaaa 52268428  T

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Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 33143925 - 33144007
Alignment:
Q  345 tacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    |||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 33144007  T

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Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 39154562 - 39154439
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   |||||||||| || | ||  ||||||||||||      |||||||    
T  39154562 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 39154463  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  39154462 atttttcgtcctacctcctatttt 39154439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 4636513 - 4636426
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | |||  ||||||||||||    
T  4636513 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattat 4636426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 15173635 - 15173478
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||| ||| ||||||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  15173635 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctg-ccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 15173537  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||| | ||| ||||| |||||||||||||||    
T  15173536 atttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 15646195 - 15646353
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||| ||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||  || |||||||||      |||||||    
T  15646195 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttgc 15646294  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| |  ||||| |  ||||| ||||||||| |||||||||||||||    
T  15646295 atttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 26859062 - 26859149
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || | ||||||||| ||||| |||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  26859062 ttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattat 26859149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 500
Target Start/End: Complemental strand, 9019505 - 9019338
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||  |||||||| ||| |||| |||   ||||||||||||| | ||| ||| ||||||||      |||||||    
T  9019505 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 9019406  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||| ||||||| || ||||| |  | ||| ||| ||||| |||| |||||||||||||| ||||    
T  9019405 atttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 48513001 - 48513080
Alignment:
Q  20 agggtccacttgatgg--acaatactgagt-attattaccttactgaaaatgttgacattgagcaaagtcttgtttgtga 96  Q
    ||||||||||||||||  |||||||||||| |  ||  ||||||| |||||||| |||||||||||||||||||||||||    
T  48513001 agggtccacttgatggggacaatactgagtgagcatagccttacttaaaatgttcacattgagcaaagtcttgtttgtga 48513080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 47826967 - 47827015
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtc 388  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||    
T  47826967 ttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtc 47827015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 2733499 - 2733416
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaa 423  Q
    ||||||| ||||||| || | ||||||||| ||| || ||||||||||||||   ||||||||||||| | ||| |||||||||    
T  2733499 ttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 467 - 507
Target Start/End: Original strand, 17088286 - 17088326
Alignment:
Q  467 aaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| ||||| |||||||||||||||| ||||||||    
T  17088286 aaatgcagagaaatggcagttttagacctacctcctatgct 17088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 3e-46; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 239356 - 239528
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||||  |||| ||||||||| | ||| |||||||||||||      ||||||    
T  239356 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgttgc 239454  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  239455 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 338 - 505
Target Start/End: Original strand, 11090522 - 11090695
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| | ||||||   ||||||||||||| | ||| |||||||||||||      ||||    
T  11090522 gtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 11090621  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  11090622 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 18451373 - 18451200
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   ||||||||||||| | || |||||||||| |||      ||||||    
T  18451373 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttgc 18451274  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  18451273 atttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 40027143 - 40027316
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  40027143 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 40027242  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||  |||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  40027243 attttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 43058336 - 43058509
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    |||||||||||||||||| ||||||||||| | |||||| ||| ||||||||  |||||||||||||| | ||| |||||||||||||      ||||||    
T  43058336 ttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43058435  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| | |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  43058436 atttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 333 - 507
Target Start/End: Complemental strand, 40815894 - 40815714
Alignment:
Q  333 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat----- 427  Q
    |||| ||||||||||||||||| || ||||||||||| |||||||||||| ||||  ||   ||||||||||||| | ||| | |||||||||||         
T  40815894 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcattt 40815795  T
Q  428 -tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
     ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  40815794 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 22374323 - 22374496
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  22374323 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374422  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||| | |||||| ||||||||||||| || |||||||    
T  22374423 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 500
Target Start/End: Complemental strand, 8425903 - 8425736
Alignment:
Q  339 tttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttg 432  Q
    |||||||||||||||| |  | ||||||||| |||||||||||||||||||||   |||||||| |||| | ||| |||||||||||||      |||||    
T  8425903 tttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttg 8425804  T
Q  433 catttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    |||||||| || ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  8425803 catttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 1978111 - 1978284
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || | ||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  1978111 ttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1978210  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||  ||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  1978211 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 338 - 504
Target Start/End: Original strand, 14432143 - 14432315
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| ||||||| |||| ||||| ||   |||||||| | || | ||| ||||||||| |||      ||||    
T  14432143 gtttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgtt 14432242  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctat 504  Q
    ||||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  14432243 gcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 3025467 - 3025641
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    |||| |||||| ||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||| |||      ||||    
T  3025467 gtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgtt 3025566  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| ||||||||| |||||||||||| ||||| ||| | |||||||||||||||||||||||||||||||    
T  3025567 gcatttttcgtcctacccc-cattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 26538100 - 26538273
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || |||||||||||  ||||||||||| |||| |||   ||||||||||||| | | | |||||||||||||      ||||||    
T  26538100 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttgttgc 26538199  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||| ||||||||||||||| || |||||||    
T  26538200 atttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 340 - 505
Target Start/End: Original strand, 28616616 - 28616788
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 28616715  T
Q  434 atttttcatcctaccccccattttattctcc-aaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    | ||||| ||||||||||||||||||| ||| ||||| ||||| ||||  |||||||||||||||||||||||    
T  28616716 aattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 340 - 500
Target Start/End: Complemental strand, 26538621 - 26538454
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   | ||||||||||| | ||| ||||||||||||      |||||||    
T  26538621 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26538522  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||| |||||||||||||||| |  | ||| ||| ||||| ||||||||||||||||||||||||    
T  26538521 atttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 340 - 505
Target Start/End: Original strand, 7446345 - 7446519
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    |||||||||||||||||| ||||||||||| ||||||| |||||||||||||   ||||||||||||| | ||| ||| ||||||||      || ||||    
T  7446345 ttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttattgc 7446444  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacag----ttttagacctaccccctatg 505  Q
    ||||||| || || |||||||||||||||||||||| ||||| |||||||||    |||||||| |||||||||||    
T  7446445 atttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagttaattttagacataccccctatg 7446519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 340 - 469
Target Start/End: Complemental strand, 35781205 - 35781070
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | |||  |||||||||||      |||||||    
T  35781205 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgc 35781106  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    ||||||| ||||| |||||||||||| |||||||||    
T  35781105 atttttcgtcctaacccccattttatcctccaaaaa 35781070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 22374867 - 22374709
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  22374867 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374768  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||| | ||||||||| |||||||||||||||    
T  22374767 atttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 491
Target Start/End: Complemental strand, 43058883 - 43058717
Alignment:
Q  331 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta---- 426  Q
    |||||| | |||||||||||||||||| ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  ||||||||||||        
T  43058883 tatttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcat 43058784  T
Q  427 -ttgttgcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
     |||||||||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  43058783 tttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 469
Target Start/End: Original strand, 20444752 - 20444887
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 433  Q
    ||||||||||||||| || ||||||||||| | |||||||||| ||||||||   ||||||||||||| | ||| ||||||||      ||| |||||||    
T  20444752 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgttgc 20444851  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    | ||||| |||||||||||||||||| |||||||||    
T  20444852 agttttcgtcctaccccccattttatcctccaaaaa 20444887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 1978651 - 1978564
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || | ||||||||| |||||||||||||||||||||   ||||||||||||| | |||||||||||||||||    
T  1978651 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattat 1978564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 7446888 - 7446730
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||| |||||||| ||||||||||   ||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  7446888 ttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 7446789  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||||||| ||||| |||||||||||||||    
T  7446788 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 457
Target Start/End: Complemental strand, 40027684 - 40027559
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||| ||| ||||||||      |||||    
T  40027684 gtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgtt 40027585  T
Q  432 gcatttttcatcctaccccccatttt 457  Q
    ||||||||| ||||||| || |||||    
T  40027584 gcatttttcgtcctacctcctatttt 40027559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 469
Target Start/End: Original strand, 35779711 - 35779846
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||   ||||||||||| ||||||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  35779711 ttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgc 35779810  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    ||||||  |||||||||||||||||| |||||||||    
T  35779811 attttttgtcctaccccccattttatcctccaaaaa 35779846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 490
Target Start/End: Original strand, 8425357 - 8425514
Alignment:
Q  339 tttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttg 432  Q
    |||||||||||||||| || | ||||||||| |||||||||||||||||| |   |||||||||||||| | ||| || ||||||||||      |||||    
T  8425357 tttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttg 8425455  T
Q  433 catttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 490  Q
    |||||||| ||||||| || ||||| |  ||||| ||||||||| ||||||||||||||    
T  8425456 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 344 - 427
Target Start/End: Complemental strand, 239890 - 239807
Alignment:
Q  344 ttacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||  |||||||||||||    
T  239890 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattat 239807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 11091062 - 11090975
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||    
T  11091062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattat 11090975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 18450833 - 18450920
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||| |   ||||||||||||| | ||| |||||||||||||    
T  18450833 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattat 18450920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 28617156 - 28617069
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||| ||||  ||||||||||||| | ||  |||||||||||||    
T  28617156 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattat 28617069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 40815348 - 40815506
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   |||||||||| || | ||| || |||||||||      |||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgc 40815447  T
Q  434 atttttcatcctacccccca-ttttattctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || | |||||  ||||| ||| ||||| |||||||||||||||    
T  40815448 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 469
Target Start/End: Original strand, 15551502 - 15551637
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 433  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||| ||  ||||||||||| || | ||  ||||||||      ||| |||||||    
T  15551502 ttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgc 15551601  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    ||||||| ||| |||| ||||||||| |||||||||    
T  15551602 atttttcgtccaaccctccattttatcctccaaaaa 15551637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 14432683 - 14432525
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||| ||||| || ||||||||||| ||||||| |||| ||||| ||   ||||||||||||||| ||  || |||||||||      |||||||    
T  14432683 ttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgc 14432584  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||||||||| || ||||| |  ||| | ||| ||||| |||||||||||||||    
T  14432583 atttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 28847237 - 28847150
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||| ||||| || ||||||||||| |||||||||||| ||||||||   |||||||||| || | ||| |||||||||||||    
T  28847237 ttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattat 28847150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 340 - 490
Target Start/End: Complemental strand, 3026003 - 3025848
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt------gttgc 433  Q
    ||||||||| ||||| || |||||||||||  |||||||||||||||| |||   |||||||||| || | ||| ||||||||||||||      |||||    
T  3026003 ttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgc 3025906  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 490  Q
    ||||||| ||||||| || ||||| |  ||||| ||||||||| ||||||||||||||    
T  3025905 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 469
Target Start/End: Complemental strand, 20440573 - 20440439
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 433  Q
    ||||||||||||||| || ||||||||||| | |||||||||| ||||||||   ||||||||||||| | ||| ||| ||||      ||| |||||||    
T  20440573 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttgc 20440474  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    | ||||| ||||| |||||| ||||| |||||||||    
T  20440473 agttttcgtcctatccccca-tttatcctccaaaaa 20440439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 507
Target Start/End: Complemental strand, 28143446 - 28143400
Alignment:
Q  461 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  28143446 ctccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 91; Significance: 7e-44; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 4796 - 4969
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  4796 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4895  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  4896 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 5333 - 5246
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| ||| |||||||| ||||| |||  ||||||||||||||| ||| ||  |||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattat 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 7e-44; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 10900472 - 10900299
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || |||| |||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  10900472 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900373  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  10900372 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 20741103 - 20741276
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  ||||||||| |||      ||||||    
T  20741103 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttgc 20741202  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  20741203 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 11277124 - 11276951
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| || ||||||||||      ||||||    
T  11277124 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 11277025  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  11277024 atttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 18257140 - 18257313
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  18257140 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18257239  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  18257240 atttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 15828183 - 15828010
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| |    |||||||||| || | ||| |||||||||||||      ||||||    
T  15828183 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 15828084  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  15828083 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 340 - 505
Target Start/End: Complemental strand, 12935699 - 12935528
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||  ||| |||||||||| | ||| |||||||||||||      |||| |    
T  12935699 ttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgttac 12935600  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||| |||||||||||||||||||||||| |||  |||| |||||||||||||||||||||||||||||    
T  12935599 atttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 23074002 - 23074164
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattattgttgcattttt 439  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   |||||||| |||| | ||| |||||||||||||     |||||||    
T  23074002 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-----cattttt 23074096  T
Q  440 catcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    | |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||  |||||||    
T  23074097 cgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 331 - 507
Target Start/End: Original strand, 28472631 - 28472812
Alignment:
Q  331 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 427  Q
    |||||| | ||||||||||||||| || ||||||||||| | |||||||||| ||||||||   ||||||||||||| | ||  ||| |||||||||       
T  28472631 tatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcat 28472730  T
Q  428 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
       ||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  28472731 ttttgttgcatttttcgtcctacccc-cattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 331 - 507
Target Start/End: Original strand, 29859820 - 29860001
Alignment:
Q  331 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 427  Q
    |||||| | ||||||||||||||| || ||||||||||| | |||||||||| ||||||||   ||||||||||||| | ||  ||| |||||||||       
T  29859820 tatttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcat 29859919  T
Q  428 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
       ||||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  29859920 ttttgttgcatttttcgtcctacccc-cattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 11444990 - 11445163
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||  ||||||||    |||||||||||||| ||  |||||||||||||      ||||||    
T  11444990 ttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttgc 11445089  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||| ||||||||||||| |||||  |||| |||||||||||||||||||||||||||||||    
T  11445090 atttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 333 - 507
Target Start/End: Complemental strand, 31470865 - 31470685
Alignment:
Q  333 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat----- 427  Q
    |||||| ||||||||||||||| || | ||||||| | |||||||||||| |||| |||   ||||||||||||| | ||| |||||||||||||         
T  31470865 tttatgcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcattt 31470766  T
Q  428 -tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
     ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||| ||||||    
T  31470765 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 507
Target Start/End: Complemental strand, 2322762 - 2322588
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| | ||| ||  |||||||||||||| | ||| |||||||||||||      ||||    
T  2322762 gtttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 2322663  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| ||||||||| ||||||||||||| ||||  |||| ||||||||||||||||||| |||||||||||    
T  2322662 gcatttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 505
Target Start/End: Complemental strand, 1149974 - 1149802
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||| | ||||||| |||| ||||| ||   |||||||| |||| | ||| ||||||||||||      |||||||    
T  1149974 ttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttgc 1149875  T
Q  434 atttttcatcctaccccccattttattctcca-aaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||| |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||    
T  1149874 atttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 18505461 - 18505288
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||| ||||||| || ||||||||||| |||||||||||| || |||||   |||||||||| || | |||||||||||||||||      ||||||    
T  18505461 ttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgc 18505362  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||||||||||||||||||||||||| || | ||| |||||||||||||| | ||| ||||||||||    
T  18505361 atttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 339 - 500
Target Start/End: Original strand, 10899941 - 10900109
Alignment:
Q  339 tttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttg 432  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      ||||||    
T  10899941 tttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900040  T
Q  433 catttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    |||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||||||||||||||||||||||    
T  10900041 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 2319675 - 2319832
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  2319675 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2319774  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| |||||||||||||||||||||||| ||| ||||| |||||| ||||||||    
T  2319775 atttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 11445529 - 11445371
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||  |||||||||||||| | ||| ||||||||||||      |||||||    
T  11445529 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11445430  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||| | ||| ||||| |||||||||||||||    
T  11445429 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 12935160 - 12935318
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  12935160 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12935259  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  12935260 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 23075670 - 23075512
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  23075670 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 23075571  T
Q  434 atttttcatcctacccccca-ttttattctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| | ||||| || | |||||  ||||||||||||||| |||||||||||||||    
T  23075570 atttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 340 - 494
Target Start/End: Original strand, 4811375 - 4811535
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| ||   || |||||| |||||||||||| ||||| ||   |||||||| |||||| ||| |||||||||||||      |||| |    
T  4811375 ttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtttc 4811474  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacc 494  Q
    ||||||| || |||||||||||||||||| |||||| ||||| |||| |||||||||||||    
T  4811475 atttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 31470318 - 31470476
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||||||| ||||||||      |||||||    
T  31470318 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttgttgc 31470417  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  31470418 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 427
Target Start/End: Original strand, 18504920 - 18505009
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| ||||||||  |||||||||||||| | ||| || ||||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattat 18505009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 22219895 - 22219808
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  22219895 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 22219808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 425
Target Start/End: Original strand, 1149468 - 1149553
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatt 425  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||    
T  1149468 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 469
Target Start/End: Original strand, 29033437 - 29033573
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 433  Q
    ||||||||||||||| || |||| |||||| || ||||||||||||||||||   ||||||||||||| | ||| ||||||||      ||| |||||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgc 29033536  T
Q  434 atttttcatcctaccccccattttatt-ctccaaaaa 469  Q
    |  ||||||||||||||||||||| || |||||||||    
T  29033537 acatttcatcctaccccccatttttttcctccaaaaa 29033573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 4811798 - 4811675
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||| |||||||||| ||||||||||| ||||||| |||| || || || ||||||||||||||| | ||| ||||||||||||      |||||||    
T  4811798 ttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4811699  T
Q  434 atttttcatcctaccccccatttt 457  Q
    |||||||||| |||| || |||||    
T  4811698 atttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 467
Target Start/End: Complemental strand, 3835270 - 3835135
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||| ||   ||||||||  |||||||||||| ||||||||  | |||||||||||| | ||  |||||| |||||      ||||     
T  3835270 gtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtg 3835171  T
Q  432 gcatttttcatcctaccccccattttattctccaaa 467  Q
    ||||||||| |||||||||||||||||| |||||||    
T  3835170 gcatttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 428
Target Start/End: Complemental strand, 18257679 - 18257591
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt 428  Q
    ||||||| ||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||||    
T  18257679 ttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatt 18257591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 20741646 - 20741559
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||| ||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| |||||||||||||    
T  20741646 ttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattat 20741559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 15827641 - 15827705
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaaca 404  Q
    ||||||||||||||| || |||||||||||  ||||||||||| |||| ||||  ||||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaaca 15827705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 500
Target Start/End: Original strand, 11276686 - 11276760
Alignment:
Q  427 ttgttgcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||| |||||||| ||||||| || ||||| |  ||||||||| ||||| ||||||||||||||| ||||||||    
T  11276686 ttgtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 506
Target Start/End: Complemental strand, 35163602 - 35163557
Alignment:
Q  461 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgc 506  Q
    |||||||||  |||| ||||||||||||||| ||||||||||||||    
T  35163602 ctccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 7e-44; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 2865297 - 2865124
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      |||| |    
T  2865297 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 2865198  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  2865197 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 8460933 - 8461106
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    |||||| |||||||| ||||||| |||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  8460933 ttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 8461032  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8461033 atttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 8647441 - 8647614
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||||      ||||||    
T  8647441 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 8647540  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  8647541 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 18183511 - 18183338
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  18183511 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183412  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  18183411 atttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 5819471 - 5819298
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  5819471 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 5819372  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||||||||||    
T  5819371 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 19359139 - 19359312
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || || |||||||| |||||||||||| ||||||||   |||||||| |||| | ||| |||||||||||||      ||||||    
T  19359139 ttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 19359238  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  19359239 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 24362378 - 24362205
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || |||| |||||| |||||||||||| ||||||||   ||||||||||||||| ||| ||||||||| |||      ||||||    
T  24362378 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttgc 24362279  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||    
T  24362278 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 164733 - 164560
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||| | |||||||| || |||||||| | |||||| ||| ||||| ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  164733 ttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 164634  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||  |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  164633 attttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 15708974 - 15709146
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || | ||||||||| |||||||||||| ||||  ||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  15708974 ttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15709073  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    || |||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  15709074 atatttcgtcctacccc-cattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 29455284 - 29455111
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    |||||||||| |||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||  |||||||||||||      ||||||    
T  29455284 ttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 29455185  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||| | ||||||    
T  29455184 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 16018592 - 16018763
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat-----tgttgca 434  Q
    ||||||||||||||| || ||||||||||| ||| ||||||||||| || ||   |||||||| |||| | ||| |||||||||||||     | |||||    
T  16018592 ttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattatatttttattgca 16018691  T
Q  435 tttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||| | ||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  16018692 ttttccgtcctacccc-cattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 333 - 507
Target Start/End: Complemental strand, 15372422 - 15372242
Alignment:
Q  333 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------atta 426  Q
    |||| ||||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||      |||     
T  15372422 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 15372323  T
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||  | ||||  ||||||||||| |||||||| ||||| |||||||||||||||||||||| | ||||||    
T  15372322 ttgttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 503
Target Start/End: Complemental strand, 14215785 - 14215616
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || ||||||||||  |||||||||||| || |||||   ||||||||||||| | ||| ||||||||| |||      ||||||    
T  14215785 ttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 14215686  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccccta 503  Q
    ||||||| || || |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  14215685 atttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 24332106 - 24331929
Alignment:
Q  340 ttaattacactttt-gatcatcgtgttttgggctactcacgaaattggtcctgtattttt-aaaacagaatacaacagtccttcaattat-------tgt 430  Q
    |||||||||||||| | ||||| ||||||||  ||||||||||| || |||||  ||||| ||||||||| | ||| ||||| |||||||       |||    
T  24332106 ttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgt 24332007  T
Q  431 tgcattttt-catcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| | |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  24332006 tgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 338 - 491
Target Start/End: Original strand, 18182971 - 18183131
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||    
T  18182971 gtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 18183070  T
Q  432 gcatttttcatcctacccccca-ttttattctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||| ||||||| || | |||||| | ||| ||| ||||| |||||||||||||||    
T  18183071 gcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 356 - 507
Target Start/End: Original strand, 25000109 - 25000266
Alignment:
Q  356 tcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgcatttttcatcctaccc 449  Q
    |||||||||||||| ||||||||||| |||||| ||   | ||||||||||||| ||  |||||| ||||||      | ||||||||||  ||||||||    
T  25000109 tcatcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctaccc 25000208  T
Q  450 cccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||||||||| | ||| |||||||||||||||| ||||| | ||||||    
T  25000209 cccattttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 469
Target Start/End: Complemental strand, 7349559 - 7349424
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   |||||||||| || | |||  |||||||      ||| |||||||    
T  7349559 ttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttgc 7349460  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    | |||||||||||||||||||||| | |||||||||    
T  7349459 acttttcatcctaccccccattttttcctccaaaaa 7349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 491
Target Start/End: Original strand, 5818930 - 5819090
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| ||||||||      |||||    
T  5818930 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgtt 5819029  T
Q  432 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||| || |||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  5819030 gcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 493
Target Start/End: Complemental strand, 25000631 - 25000471
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || || |||||||| |||||||||||||||||| |||  ||||||||||||| | ||  ||| ||||||||      |||||||    
T  25000631 ttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 25000532  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagac 493  Q
    ||||||| ||| ||| || ||||| |  ||||||||| ||||| |||||||||||||||||    
T  25000531 atttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 496
Target Start/End: Complemental strand, 14464062 - 14463901
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||  || ||||||||||| |||||||||||| |  |  |||  |||||||| |||| | |||  ||||||||||||      | ||||    
T  14464062 ttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttattgc 14463963  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagaccta 496  Q
    ||||||| |||||||||  ||||||||||||||||| ||||| ||||||||||||||||||||    
T  14463962 atttttcgtcctacccca-attttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 19359678 - 19359591
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  19359678 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 19359591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 24331562 - 24331722
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta--------ttgtt 431  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||        |||||    
T  24331562 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgtt 24331661  T
Q  432 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||||||||| | || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  24331662 gcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 24361933 - 24361997
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttag 491  Q
    |||||||||||||| |||||||||||||||||||||||| ||| ||||| |||||| ||||||||    
T  24361933 ttgttgcatttttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 2864757 - 2864915
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || | ||||||||| ||||||||||||||| || ||   |||||||||| || | ||| ||||||||||||      |||||||    
T  2864757 ttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 2864856  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  2864857 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 4623151 - 4623238
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| |||||||||||||   ||||||||||||||||||||  | |||||||||||| | ||  |||||||||||||    
T  4623151 ttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattat 4623238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 8461473 - 8461386
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| |||||||||||||    
T  8461473 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattat 8461386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 8647980 - 8647893
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||| |||||||||||||    
T  8647980 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattat 8647893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 493
Target Start/End: Complemental strand, 16019131 - 16018969
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||| || || ||||||||  ||||||||||||||||||||   |||||||| |||||| ||  || |||||||||      |||||    
T  16019131 gtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgtt 16019032  T
Q  432 gcatttttcatcctacccccca-ttttattctccaaaaatgcagaaaaatgacagttttagac 493  Q
    | ||||||| ||||||| || | |||||  ||||| ||| ||||| |||||||||||||||||    
T  16019031 gtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 473
Target Start/End: Original strand, 4219666 - 4219804
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgttgc 433  Q
    |||||||||||||||||| ||||||||||||||| | || ||| ||||| ||  |||||||||||||| | |   |||||| |      ||| |||||||    
T  4219666 ttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgc 4219765  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgca 473  Q
    ||||||| ||||| |||||||||||| |||||||||||||    
T  4219766 atttttcgtccta-cccccattttatcctccaaaaatgca 4219804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 427 - 491
Target Start/End: Original strand, 24325308 - 24325372
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttag 491  Q
    |||| ||||||||| |||||||||||||||||||||||| ||| ||||| |||||| ||||||||    
T  24325308 ttgtcgcatttttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 15371874 - 15371960
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    |||||||||||||||||| |||| |||||| ||||||||| |||||||||||   ||||||||||||| | ||  |||||||||||||    
T  15371874 ttaattacacttttgatcctcgtattttggtctactcacg-aattggtcctgcccttttaaaacagaacaaaatggtccttcaattat 15371960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 29454743 - 29454830
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    |||||| |||||||| |||| ||||||||| |||||||||||||||||| ||   ||||||||||||| | ||| |||||| ||||||    
T  29454743 ttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattat 29454830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 490
Target Start/End: Original strand, 164194 - 164350
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta-----ttgttgca 434  Q
    ||||||||||||||| || ||||||||||  |||||||||||| ||||||||   ||||| |||| || | ||| ||| ||||||||     ||||||||    
T  164194 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcattttgttgca 164293  T
Q  435 tttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagtttta 490  Q
    |||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||| |||||    
T  164294 tttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 4222264 - 4222197
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaa 407  Q
    ||||||||||||||| || |||||||||||||| ||||||||| ||||| ||   |||||||||||||    
T  4222264 ttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaa 4222197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 507
Target Start/End: Complemental strand, 24325639 - 24325580
Alignment:
Q  448 cccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||||||| || | |||| ||||||||||||||||| || ||||||||||    
T  24325639 cccccattttattctccagaagtacagagaaatgacagttttagacttatcccctatgct 24325580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 469
Target Start/End: Complemental strand, 4624736 - 4624632
Alignment:
Q  371 ctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgcatttttcatcctaccccccattttattctcc 464  Q
    |||||||||||||||||| ||| | ||||||||| || | |||  || |||||||||      ||||||||||||| |||||||||||||||||| || |    
T  4624736 ctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctaccccccattttatccttc 4624637  T
Q  465 aaaaa 469  Q
    |||||    
T  4624636 aaaaa 4624632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 7e-44; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 15523776 - 15523603
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||   |||||||||| || | ||  ||||||||| |||      ||||||    
T  15523776 ttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttgttgc 15523677  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||    
T  15523676 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 46193947 - 46193774
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||| |||||||||||||      | ||||    
T  46193947 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 46193848  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| | ||| || ||||||||||||||||||||||||||||    
T  46193847 atttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 33109687 - 33109860
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  33109687 ttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 33109786  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  33109787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 4219560 - 4219733
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || ||||||||||| |||||||||||| ||||||||   |||||||| | || | |||||||||||||||||      ||||||    
T  4219560 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgc 4219659  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||||    
T  4219660 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 11153689 - 11153516
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | |||  ||||||||||||      ||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgc 11153590  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||| ||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||||    
T  11153589 atttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 25447778 - 25447611
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  25447778 ttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 25447679  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccc 501  Q
    ||||||| |||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  25447678 atttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 22170478 - 22170306
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||  ||||| ||||||||| |||||  ||||||||||| || | ||| ||| |||||||||      ||||||    
T  22170478 ttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttgttgc 22170380  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||    
T  22170379 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 332 - 507
Target Start/End: Complemental strand, 22434726 - 22434547
Alignment:
Q  332 atttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat---- 427  Q
    ||||| ||||||||||| ||||| || ||||||||||| |||||||||||| ||||||||   ||||||| ||||| | ||| ||| |||||||||        
T  22434726 atttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatt 22434628  T
Q  428 --tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
      ||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  22434627 tttgttgcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 340 - 500
Target Start/End: Complemental strand, 38962361 - 38962195
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || ||||||||||| ||| |||||||| |||||| |   ||||||||||||| | ||| |||||||||||||      ||||||    
T  38962361 ttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 38962262  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||| ||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  38962261 atttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 12234332 - 12234505
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || || ||||||||  || |||||||| ||||||||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  12234332 ttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12234431  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||    
T  12234432 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 25937673 - 25937846
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || ||||||||| | |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  25937673 ttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25937772  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||  ||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  25937773 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 23494446 - 23494619
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||| ||||| || ||||||||||| |||||||||||| | ||||||   ||||||||||||| | | | |||||||||||||      | ||||    
T  23494446 ttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgc 23494545  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| | ||||||    
T  23494546 atttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 48526199 - 48526371
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| |  ||||||||||  ||||||| |||| |||  |||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  48526199 ttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 48526298  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  48526299 atttttcgtcctacccc-cattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 51020800 - 51020973
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    |||||||||||||||||| || ||||||||   | |||| ||| ||||||||   ||||||||||||| | |||  ||||||||||||      ||||||    
T  51020800 ttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 51020899  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||||||||||||||||||||| |||||| | ||| |||||||||||||||||||||||||||||||    
T  51020900 atttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 338 - 507
Target Start/End: Complemental strand, 2118839 - 2118665
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||||||||| || ||||||||||| || |||| |||| ||||||| |  |||||||||| || | ||| ||| |||||||||      ||||    
T  2118839 gtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgtt 2118740  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||| |||| | ||||||||||||||||||||||||    
T  2118739 gcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 338 - 507
Target Start/End: Complemental strand, 54995611 - 54995437
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta-----ttgttg 432  Q
    ||||||||||||||||| || ||||||||||| |||||||||||| || || ||   |||||||| |||| | ||| ||||||||| ||     ||||||    
T  54995611 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatcattttgttg 54995512  T
Q  433 catttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||| ||||| |||||||||||||||| ||||| ||| | |||||| ||||||||||||||| ||||||||    
T  54995511 catttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 427 - 507
Target Start/End: Complemental strand, 12503885 - 12503805
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  12503885 ttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 338 - 507
Target Start/End: Original strand, 45082433 - 45082606
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    |||||||||| |||||| |||||||||||||| ||||||||||| | |||  ||   |||||||| |||| | ||| |||||||||||||      ||||    
T  45082433 gtttaattacgcttttggtcatcgtgttttggtctactcacgaact-ggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgtt 45082531  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| ||||||||| ||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||    
T  45082532 gcatttttcgtcctacccc-cattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 340 - 493
Target Start/End: Original strand, 46193408 - 46193568
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||   ||||||||||||| | ||  ||||||||||||      |||||||    
T  46193408 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttgc 46193507  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagac 493  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||||    
T  46193508 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 442 - 507
Target Start/End: Complemental strand, 18752036 - 18751971
Alignment:
Q  442 tcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  18752036 tcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 469
Target Start/End: Original strand, 48293597 - 48293732
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || |||||||||||  |||||||||||||| |||||| | ||||||||| || | ||  || |||||||||      |||||||    
T  48293597 ttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgttgc 48293696  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    |||||||||||| ||| |||||||||||||||||||    
T  48293697 atttttcatcctgccctccattttattctccaaaaa 48293732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 25938213 - 25938126
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || | ||||||||| |||||||||||||||||||||   ||||||||||||| | |||||||||||||||||    
T  25938213 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattat 25938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 51021337 - 51021215
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta-----ttgttgca 434  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||   |||||||||| || | ||| |||||| |||||     ||||||||    
T  51021337 ttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcattttgttgca 51021238  T
Q  435 tttttcatcctaccccccatttt 457  Q
    |||||| ||||||| || |||||    
T  51021237 tttttcgtcctacctcctatttt 51021215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 428
Target Start/End: Original strand, 15523238 - 15523326
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt 428  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||||    
T  15523238 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatt 15523326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 22434182 - 22434340
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      ||||||     
T  22434182 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 22434281  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||||||||||    
T  22434282 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 23494985 - 23494898
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||||||   ||||||||||||| | ||| |||||||||||||    
T  23494985 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 23494898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 25447250 - 25447408
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||||| |||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  25447250 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25447349  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||||| ||||||    
T  25447350 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 491
Target Start/End: Complemental strand, 48526725 - 48526565
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||| ||||||| || ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||    
T  48526725 gtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgtt 48526626  T
Q  432 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||| ||||||| || ||||| |  ||||| |||  |||| |||||||||||||||    
T  48526625 gcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 491
Target Start/End: Original strand, 54995070 - 54995230
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||| || |||||| |||| |||||||||||| | |||||    ||||||||||||| | ||| ||||||||||||      |||||    
T  54995070 gtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 54995169  T
Q  432 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||| ||||||| || ||||| |  ||||| ||||| ||| |||||||||||||||    
T  54995170 gcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 457
Target Start/End: Original strand, 2118296 - 2118419
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || | ||||||||| |||||||||||||||||||||   |||||||||| || | || |||||||||||||      |||||||    
T  2118296 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttgc 2118395  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  2118396 atttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 11153149 - 11153307
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||| ||||||| || ||||||||||| |||||||| ||||||||| ||   |||||||| |||||| ||| ||||||||||||      |||||||    
T  11153149 ttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgttgc 11153248  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  | ||| ||| ||||| |||||||||||||||    
T  11153249 atttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 12234871 - 12234713
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||| ||||||| || ||||||||||| |||||||||||| || || ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  12234871 ttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12234772  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  | ||| ||||||||| |||||||||||||||    
T  12234771 atttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 45082966 - 45082808
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||| ||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  45082966 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 45082867  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||| | ||| ||||| |||||||||||||||    
T  45082866 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 491
Target Start/End: Complemental strand, 4220108 - 4219943
Alignment:
Q  333 tttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ 426  Q
    |||| ||||||||||||||||| || ||||||||||| |||||||||||| || |||||   ||||||||||||| | ||  ||| ||||||||          
T  4220108 tttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcattt 4220009  T
Q  427 ttgttgcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    |||||||||||||| ||||||| || ||||| |  || |||||| ||||| |||| ||||||||||    
T  4220008 ttgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 472
Target Start/End: Complemental strand, 43281313 - 43281195
Alignment:
Q  359 tcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta-----ttgttgcatttttcatcctacccccca 453  Q
    ||||||||||| |||||||||||| ||||| ||   ||||||||||||| | ||  || |||||||||     |||||||||||||| ||||||||||||    
T  43281313 tcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattatatttttgttgcatttttcgtcctacccccca 43281214  T
Q  454 ttttattctccaaaaatgc 472  Q
    |||||| ||| ||||||||    
T  43281213 ttttatcctcaaaaaatgc 43281195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 33110006 - 33109883
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || || |||||||| || ||||||||||||||||||   |||||||||| || | ||| ||||||||||||      |||||||    
T  33110006 ttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33109907  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  33109906 atttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 469
Target Start/End: Complemental strand, 44892690 - 44892555
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||| | ||||| || ||||||||||  |||||||||||| |||| |||   ||||||||||||| | ||| ||| |||||||||      ||||||    
T  44892690 ttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgc 44892591  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    ||||||| |||||||| ||||||||| |||||||||    
T  44892590 atttttcgtcctaccctccattttatcctccaaaaa 44892555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 407
Target Start/End: Complemental strand, 18764062 - 18763995
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaa 407  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||| |||  |||||||||||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaa 18763995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 469
Target Start/End: Complemental strand, 48713890 - 48713753
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    |||||||||||||||| ||  ||||||||| | ||||||| |||| ||||| ||   ||||||||||||| | ||  ||||||||||||      |||||    
T  48713890 gtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgtt 48713791  T
Q  432 gcatttttcatcctaccccccattttattctccaaaaa 469  Q
    ||||||||| |||| ||| ||||||||| |||||||||    
T  48713790 gcatttttcgtcctcccctccattttatcctccaaaaa 48713753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 491
Target Start/End: Original strand, 18751600 - 18751760
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttca------attattgtt 431  Q
    ||||||||||||||||| || ||||||||||| |||||||  ||| ||||| ||   ||||||||||||| | ||| ||||||||      ||| |||||    
T  18751600 gtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgtt 18751699  T
Q  432 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||||| ||| ||| || ||||| |  ||||| ||| ||||||||||| |||||||||    
T  18751700 gcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 469
Target Start/End: Complemental strand, 48295085 - 48294949
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||| ||||| |||||||||||||  |||||||||||||||||| ||  | ||||||||| || | ||  ||| ||||||||      |||||||    
T  48295085 ttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttgc 48294986  T
Q  434 attttt-catcctaccccccattttattctccaaaaa 469  Q
    |||||| | ||||||||||||||||||  ||||||||    
T  48294985 atttttccgtcctaccccccattttatcttccaaaaa 48294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 467
Target Start/End: Original strand, 16690937 - 16691072
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgtt 431  Q
    ||||||||||| ||||| || | ||||||||  |||||||||||| ||||||||  | ||||||||| || | ||   ||||||||||||      ||||    
T  16690937 gtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgtt 16691036  T
Q  432 gcatttttcatcctaccccccattttattctccaaa 467  Q
    ||||||||| |||||||||| ||||||| |||||||    
T  16691037 gcatttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 20471053 - 20470895
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||| |    ||||||||||||| | ||| ||| ||||||||      |||||||    
T  20471053 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 20470954  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||| ||||||||    
T  20470953 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 35363143 - 35363096
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggt 387  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  35363143 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggt 35363096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 10258429 - 10258363
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacaga 406  Q
    ||||||||||||||| || ||||||| ||| ||||||| |||||||||||||   ||||||||||||    
T  10258429 ttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacaga 10258363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 409
Target Start/End: Complemental strand, 16318318 - 16318249
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaata 409  Q
    ||||||||||||||| || ||||||||||| |||||||| ||| || |||||   |||||||||||||||    
T  16318318 ttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaata 16318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 471 - 507
Target Start/End: Complemental strand, 17504365 - 17504329
Alignment:
Q  471 gcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||| |||||||||||||||||||||||||||||||    
T  17504365 gcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 469
Target Start/End: Complemental strand, 20958401 - 20958268
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||  || |||| |||||| |||||||||||| ||||||||   ||||||||||||| | |   ||||||||||||      |||||||    
T  20958401 ttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgc 20958302  T
Q  434 atttttcatcctaccccccattttattctccaaaaa 469  Q
    ||||||  ||||| |||||||||||| |||||||||    
T  20958301 attttt-gtccta-cccccattttatcctccaaaaa 20958268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 471 - 507
Target Start/End: Original strand, 35193447 - 35193483
Alignment:
Q  471 gcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||| |||||||||||||||||||||||||||||||    
T  35193447 gcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 507
Target Start/End: Original strand, 17504119 - 17504149
Alignment:
Q  477 aaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||||||||||||||||||||    
T  17504119 aaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 507
Target Start/End: Original strand, 40160239 - 40160269
Alignment:
Q  477 aaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||||||||||||||||||||    
T  40160239 aaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 469
Target Start/End: Original strand, 44890613 - 44890655
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaa 469  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||    
T  44890613 ttgttgcatttttcatcataccccccattttatcctcaaaaaa 44890655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 472
Target Start/End: Original strand, 20957285 - 20957330
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaatgc 472  Q
    |||||||||||||| || ||| ||||||||||||||| ||||||||    
T  20957285 ttgttgcatttttcgtcatactccccattttattctcaaaaaatgc 20957330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 4749 - 4576
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| |||||| ||||||      ||||||    
T  4749 ttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4650  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  4649 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 756 - 928
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat-----tgttgca 434  Q
    ||||||||||||||| || ||||||||||| |||||||||| | ||||||||   ||||||||||||| | ||| |||||||||||||     |||||||    
T  756 ttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttgttgca 855  T
Q  435 tttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||| ||||||    
T  856 tttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 500
Target Start/End: Complemental strand, 1283 - 1116
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||  || |||||||||||  ||||||||||| ||||||||   ||||||||||||| | ||| ||||||||||||      |||||||    
T  1283 ttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1184  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    || |||| ||||||| || ||||| |  | ||| ||| ||||||||||| |||||||||||| |||||    
T  1183 atctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccc 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 340 - 505
Target Start/End: Original strand, 1670 - 1841
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || || |||||||| |||||||||||| ||||||||   ||||||||||||| | ||   ||||||||||||      ||||||    
T  1670 ttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttgc 1769  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatg 505  Q
    ||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  1770 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 491
Target Start/End: Complemental strand, 2209 - 2051
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   ||||||||||||| | ||| ||| ||||||||      |||||||    
T  2209 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2110  T
Q  434 atttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttag 491  Q
    ||||||| ||||||| || ||||| |  ||||| ||| ||||| |||||| ||||||||    
T  2109 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 134224 - 134042
Alignment:
Q  331 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta---- 426  Q
    |||||| | ||||||||||||||| || ||||||||||| |||||||||||| | ||| ||   |||||| |||||| | |||  |||||||||||        
T  134224 tatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacat 134125  T
Q  427 --ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
      |||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  134124 ttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 83; Significance: 4e-39; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 507
Target Start/End: Original strand, 64305 - 64478
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||   ||||||||||| || |||||   ||||||||||||| | ||| |||||||||||||      ||||||    
T  64305 ttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 64404  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  64405 atttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 64849 - 64760
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||||| || |||||||||||  ||||||||||| |||||| |   ||||||||||||| | ||| |||||| ||||||    
T  64849 gtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattat 64760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 507
Target Start/End: Complemental strand, 205784 - 205738
Alignment:
Q  461 ctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  205784 ctccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 340 - 507
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgc 433  Q
    ||||||||||||||| || ||||||||||| |||||||||||| ||||  |    ||||||||||||| | ||| |||||||||||||      ||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  434 atttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  10314 atttttcgtcctaccccc-attttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 359 - 507
Target Start/End: Original strand, 10643 - 10797
Alignment:
Q  359 tcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattatt------gttgcatttttcatcctacccccc 452  Q
    ||||||||||| ||||||| |||| ||||||||   ||||||||||||| | ||| ||||||||| |||       |||||||||||| |||||||| ||    
T  10643 tcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctcc 10742  T
Q  453 attttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  10743 attttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

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Target: scaffold0417; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 457
Target Start/End: Complemental strand, 11165 - 11042
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgc 433  Q
    ||||||||||||||| || ||||||||||| ||||| |||||| ||||||||   |||||||||| || | ||| ||||||||||||      |||||||    
T  11165 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 11066  T
Q  434 atttttcatcctaccccccatttt 457  Q
    ||||||| ||||||| || |||||    
T  11065 atttttcgtcctacctcctatttt 11042  T

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Target: scaffold0157 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 427 - 507
Target Start/End: Original strand, 16592 - 16672
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  16592 ttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 16672  T

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Target: scaffold0027 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 331 - 507
Target Start/End: Complemental strand, 42709 - 42528
Alignment:
Q  331 tatttatgtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat--- 427  Q
    |||||| | ||||||| |||||||  | ||||||||||| ||||||| |||| || | |||   ||||||||||||| | ||| |||||||| ||||       
T  42709 tatttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcat 42610  T
Q  428 ---tgttgcatttttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctaccccctatgct 507  Q
       |||| |||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  42609 ttttgtttcatttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

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Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 500
Target Start/End: Original strand, 42170 - 42339
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgtt 431  Q
    ||||||||||||||||  |  ||||||||||| ||| |||||||| || |||||   ||||||||||||| | ||| ||| ||||||||      |||||    
T  42170 gtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgtt 42269  T
Q  432 gcatttttcatcctaccccccatttt-attctccaaaaatgcagaaaaatgacagttttagacctacccc 500  Q
    ||||||||  || |||| || ||||| |  || || ||| ||||| ||||||||||||||||||||||||    
T  42270 gcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

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Target: scaffold0176 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 343 - 498
Target Start/End: Original strand, 18841 - 19001
Alignment:
Q  343 attacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat------tgttgcatt 436  Q
    |||||||||||| || |  |||||||| |||||||||||| ||||| ||   |||||||||| || | ||| || ||||||||||      |||||||||    
T  18841 attacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttgttgcatt 18940  T
Q  437 tttcatcctaccccccattttattctccaaaaatgcagaaaaatgacagttttagacctacc 498  Q
    |||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||| ||||    
T  18941 tttcatcctacccc-cattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

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Target: scaffold0176; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 19163 - 19076
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||| || ||||||||||| |||||||||||| | ||||||   ||||||||||||| | ||| |||||||||||||    
T  19163 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattat 19076  T

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Target: scaffold1585 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 570 - 657
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    |||||||||||||||||| ||||||||||| |||||||||||| || || ||   ||||||||||||| | ||| |||||||||||||    
T  570 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattat 657  T

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Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 390
Target Start/End: Complemental strand, 62002 - 61950
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcct 390  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  62002 gtttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcct 61950  T

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Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 61031 - 61082
Alignment:
Q  340 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctg 391  Q
    |||| ||||||||||||| ||||||||||| |||||||||||| || |||||    
T  61031 ttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctg 61082  T

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Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 457
Target Start/End: Complemental strand, 28784 - 28662
Alignment:
Q  341 taattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaatta------ttgttgca 434  Q
    |||||||||||||| |||||||||||||| ||||| |||||| ||||| ||   ||||||||||||| | ||| ||| ||||||||      ||||||||    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 28685  T
Q  435 tttttcatcctaccccccatttt 457  Q
     ||||| |||| |||||||||||    
T  28684 gttttcgtccttccccccatttt 28662  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 469
Target Start/End: Complemental strand, 7737 - 7695
Alignment:
Q  427 ttgttgcatttttcatcctaccccccattttattctccaaaaa 469  Q
    |||||||||||||| |||||||||| ||||||| |||||||||    
T  7737 ttgttgcatttttcgtcctaccccctattttatcctccaaaaa 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 8553 - 8464
Alignment:
Q  338 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgtatttttaaaacagaatacaacagtccttcaattat 427  Q
    ||||||||||||||||| || || |||||||| ||||| |||||| |||||||    |||||||||| |  | ||| |||||||||||||    
T  8553 gtttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattat 8464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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