View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5624-Insertion-3 (Length: 459)

Name: NF5624-Insertion-3
Description: NF5624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5624-Insertion-3
NF5624-Insertion-3
[»] chr3 (38 HSPs)
chr3 (195-459)||(20035758-20036022)
chr3 (195-440)||(19812982-19813227)
chr3 (8-195)||(20036067-20036255)
chr3 (36-194)||(19956579-19956737)
chr3 (8-193)||(19838859-19839045)
chr3 (8-193)||(19819026-19819212)
chr3 (195-457)||(19839092-19839354)
chr3 (195-459)||(19956783-19957047)
chr3 (8-193)||(19832335-19832522)
chr3 (40-193)||(26653647-26653800)
chr3 (50-195)||(20046629-20046774)
chr3 (11-193)||(20015667-20015850)
chr3 (39-193)||(24839440-24839597)
chr3 (11-195)||(26647470-26647658)
chr3 (36-193)||(19944209-19944369)
chr3 (85-193)||(19812827-19812935)
chr3 (87-195)||(19951670-19951778)
chr3 (85-193)||(19858616-19858724)
chr3 (195-291)||(20046819-20046915)
chr3 (204-439)||(20015376-20015611)
chr3 (204-457)||(20007429-20007682)
chr3 (89-193)||(19854048-19854152)
chr3 (87-193)||(19849542-19849648)
chr3 (87-193)||(20033800-20033906)
chr3 (195-290)||(19832569-19832664)
chr3 (195-457)||(26653847-26654109)
chr3 (195-286)||(19819259-19819350)
chr3 (195-458)||(19951823-19952086)
chr3 (195-291)||(20033657-20033753)
chr3 (195-457)||(26647703-26647965)
chr3 (87-193)||(19990071-19990177)
chr3 (11-139)||(17115182-17115311)
chr3 (13-139)||(26652186-26652316)
chr3 (371-453)||(19832696-19832778)
chr3 (225-366)||(19849725-19849866)
chr3 (377-456)||(20006412-20006491)
chr3 (203-296)||(19990232-19990325)
chr3 (414-457)||(20033491-20033534)
[»] chr8 (4 HSPs)
chr8 (8-194)||(22655781-22655968)
chr8 (13-193)||(11544541-11544722)
chr8 (87-193)||(22689139-22689245)
chr8 (195-411)||(22655526-22655735)
[»] chr5 (6 HSPs)
chr5 (36-193)||(26354393-26354550)
chr5 (47-193)||(9815540-9815686)
chr5 (195-439)||(9815733-9815977)
chr5 (195-291)||(38434912-38435008)
chr5 (89-193)||(38435055-38435159)
chr5 (195-439)||(26354102-26354346)
[»] chr2 (1 HSPs)
chr2 (85-193)||(39191442-39191550)
[»] chr1 (4 HSPs)
chr1 (87-193)||(1717766-1717872)
chr1 (196-447)||(1717920-1718171)
chr1 (47-191)||(38483479-38483621)
chr1 (225-292)||(38483710-38483777)
[»] chr7 (12 HSPs)
chr7 (40-188)||(12579559-12579708)
chr7 (40-188)||(12495462-12495610)
chr7 (204-291)||(12579411-12579498)
chr7 (204-291)||(12495314-12495401)
chr7 (204-291)||(12519118-12519205)
chr7 (195-304)||(12497847-12497956)
chr7 (195-304)||(12521712-12521821)
chr7 (102-191)||(12581822-12581911)
chr7 (121-191)||(12497726-12497796)
chr7 (121-191)||(12521591-12521661)
chr7 (40-181)||(12519273-12519414)
chr7 (250-304)||(12582016-12582070)
[»] chr4 (3 HSPs)
chr4 (213-329)||(6397066-6397182)
chr4 (62-188)||(6398953-6399080)
chr4 (114-154)||(6397284-6397324)


Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 195 - 459
Target Start/End: Complemental strand, 20036022 - 20035758
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  20036022 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacatgttatgtcaagtagtggaagcaatttg 20035923  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  20035922 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagacaacacagaccacatgtaggaaaattaaacaaaagtgg 20035823  T
Q  395 tattgaagtttgtgttcagcctggattttctcccaatcttgttgatactcttatttttggaaatg 459  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20035822 tattgaagtttgtgttcagcctggattttctcccaatcttgttgatactcttatttttggaaatg 20035758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 195 - 440
Target Start/End: Original strand, 19812982 - 19813227
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19812982 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcattatgtcaagtggtggaagcaatttg 19813081  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    | ||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | | ||||||    
T  19813082 ttttaggacgcgacgattttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacaccgaccacatgtaggaaaatttgacagaagtgg 19813181  T
Q  395 tattgaagtttgtgttcagcctggattttctcccaatcttgttgat 440  Q
    |||||  | |  |||||  |||| |||| |||||||||||||||||    
T  19813182 tattggtgctgctgttccacctgaatttcctcccaatcttgttgat 19813227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 8 - 195
Target Start/End: Complemental strand, 20036255 - 20036067
Alignment:
Q  8 attctgataagtttgaactgctttatccaa-tgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgag 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20036255 attctgataagtttgaactgctttatccaaatgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgag 20036156  T
Q  107 agtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttccga 195  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20036155 ggtttctgagctggttggatttgagtctatagagcaatatcttccacatagagttgctatgcaatttggaattgatcaagatgttccga 20036067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 36 - 194
Target Start/End: Original strand, 19956579 - 19956737
Alignment:
Q  36 aatgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtcta 135  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19956579 aatgatgaaattttggtaccatttaagaaggatttggatacaaaaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtcta 19956678  T
Q  136 tagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttccg 194  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19956679 tagagcaatatcttccacatagagttgctatgcaatttggaattgatcaagatgttccg 19956737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 19838859 - 19839045
Alignment:
Q  8 attctgataagtttgaactgctttatccaa-tgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgag 106  Q
    |||||||||||| ||||||| ||||||||| |||||||| |||||||||||||| || | |||| |||||||||||||||||||||||||||||| | ||    
T  19838859 attctgataagtgtgaactgttttatccaaatgatgaaattttggtaccatttaagagggatttagatacaaaaattatctcatttgttatatgccttag 19838958  T
Q  107 agtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  19838959 agtttccgagcttgttggatttgagtctatagagcaatatcttccacatagagttgctatgcaattcggaatggatcaagatgttcc 19839045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 19819026 - 19819212
Alignment:
Q  8 attctgataagtttgaactgctttatcc-aatgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgag 106  Q
    |||||||||||| ||| ||| ||||||| ||||||| || |||||||||||||| || | ||||||||||||||||| |||||||||||||||| |||||    
T  19819026 attctgataagtgtgagctgttttatccgaatgatggaattttggtaccatttaagatggatttggatacaaaaattctctcatttgttatatgtttgag 19819125  T
Q  107 agtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
    |||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  19819126 agtttctgagcttgttggttttgagtccatagagcaatatcttccacatagagttgctatgcagtttggaattgatcaagatgttcc 19819212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 195 - 457
Target Start/End: Original strand, 19839092 - 19839354
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    ||||| ||||| | ||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||  |||||||  | ||||||||  ||||  |    
T  19839092 aactattgcagacccatatatgataaaaacttgtattttccaccaagattatttgaggcagatgttaccatacgttatgcaaggtggtggatacaatcag 19839191  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    ||||   |||||||| |||||  || |||||||||||| |||| |||||||| |||||||| || |  ||||| ||||||||||| || || | ||||||    
T  19839192 tatttcctcacgacgattttgagaagaatattgtgcgttggaagagaagttcaagttcaaggaagcgtagacctcatgtaggaaagtttaacataagtgg 19839291  T
Q  395 tattgaagtttgtgttcagcctggattttctcccaatcttgttgatactcttatttttggaaa 457  Q
    |||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||    
T  19839292 tattgaggtttgtgttcaacctggattttctcccaatctggttgatactcttacttttggaaa 19839354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 195 - 459
Target Start/End: Original strand, 19956783 - 19957047
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    ||||||||||| | ||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||| |||||||  | |||||||  |||||  |    
T  19956783 aactactgcagacccatatatgataaaaacttgtattttccaccaagattatttgaggcagatgttaccacacgttatgcaaggtggtgggtgcaatcag 19956882  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    ||||   |||||||  |||||  || || |||||||||||||| |||||||| |||||||| || |  ||||| || |||||||| || || | ||||||    
T  19956883 tatttcctcacgacaattttgggaagaaaattgtgcgtcggaagagaagttcaagttcaaggaagcgtagacctcacgtaggaaagtttaacagaagtgg 19956982  T
Q  395 tattgaagtttgtgttcagcctggattttctcccaatcttgttgatactcttatttttggaaatg 459  Q
    ||| || ||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||    
T  19956983 tatggaggtttgtgttcaacctggattttctcccaatcttgttgatactcttacttttgaaaatg 19957047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 193
Target Start/End: Original strand, 19832335 - 19832522
Alignment:
Q  8 attctgataagtttgaactgctttatcc-aatgatgaaactttggtaccatttacgaagtatttggatacaaaaa-ttatctcatttgttatatgcttga 105  Q
    |||||||||||| ||| ||| ||||||| ||||||| || |||||||||||||| || | ||||||||||||||| || |||||||||||||||| ||||    
T  19832335 attctgataagtgtgagctgttttatccgaatgatggaattttggtaccatttaagatggatttggatacaaaaaattctctcatttgttatatgtttga 19832434  T
Q  106 gagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
    ||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  19832435 gagtttctgagcttgttggttttgagtccatagagcaatatcttccacatagagttgctatgcagattggaattgatcaagatgttcc 19832522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 26653647 - 26653800
Alignment:
Q  40 atgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtctataga 139  Q
    |||||| || ||||||||||| |||| ||||||||||||| ||  |||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||    
T  26653647 atgaaatttgggtaccatttaagaaggatttggatacaaacatgctctcatttgttatatgcttgagagttgctgagctagttggatttgagtctattga 26653746  T
Q  140 gcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  26653747 gcaatatcttccacatagagttgctatgcaatttggaattgaccaagatgttcc 26653800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 50 - 195
Target Start/End: Original strand, 20046629 - 20046774
Alignment:
Q  50 ggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatctt 149  Q
    ||||||||||| |||| ||||||||| ||||||  | ||||||  ||||||| |||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  20046629 ggtaccatttaagaaggatttggataaaaaaatactttcattttctatatgcctgagagtttctgagcttgttggatttgagtctatagagcagtatctt 20046728  T
Q  150 ccacatagagttactatgcaatttggaattgatcaagatgttccga 195  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||    
T  20046729 ccacatagagtttctatgcaatttggacttgaccaagatgttccga 20046774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 20015850 - 20015667
Alignment:
Q  11 ctgataagtttgaactgctttatccaa-tgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagt 109  Q
    ||||||||| |||  || ||||||||| ||||| |  ||| |||||||||| |||  ||||||||| | ||||  ||||||||||||||||||| |||||    
T  20015850 ctgataagtgtgatttgttttatccaaatgatgcattttttgtaccatttaagaaagatttggataaacaaatgctctcatttgttatatgcttaagagt 20015751  T
Q  110 ttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
    ||||||||| ||||||||||| ||||||||||| ||| | ||||| |||||| |||||||||||||||| ||||||||||||||    
T  20015750 ttccgagcttgttggatttgactctatagagcagtatttgccacacagagttgctatgcaatttggaatggatcaagatgttcc 20015667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 39 - 193
Target Start/End: Complemental strand, 24839597 - 24839440
Alignment:
Q  39 gatgaaactttggtaccatttacgaagtatttgga--tacaa-aaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtcta 135  Q
    |||||||||||||||||||||| |||  ||||||   || || ||||  ||||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  24839597 gatgaaactttggtaccatttaagaaagatttggtagtagaacaaatgctctcatttgttatattcttgagagtttctgagctagttggatttgagtcta 24839498  T
Q  136 tagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
    |||| |||||||| |||||||||||| |||||||||| ||| ||||||||||||||||    
T  24839497 tagaacaatatctaccacatagagttgctatgcaattcggatttgatcaagatgttcc 24839440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 26647470 - 26647658
Alignment:
Q  11 ctgataagtttgaactgctttatccaa-tgatgaaactttggtaccatttacgaagtatttgg---atacaaaaattatctcatttgttatatgcttgag 106  Q
    ||||||||| |||| || ||||||||| |||||||| || ||||||||||| |||  ||||||   ||  | ||||  ||||||||||||||||||||||    
T  26647470 ctgataagtgtgaattgttttatccaaatgatgaaatttcggtaccatttaagaaagatttggttgatgaacaaatgctctcatttgttatatgcttgag 26647569  T
Q  107 agtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttccga 195  Q
    |||||| ||||| |||||||| || |||||||| || ||||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  26647570 agtttctgagcttgttggattcgactctatagaacagtatctgccacatagagttgctatgcaatttggaatggatcaagatgttccga 26647658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 19944209 - 19944369
Alignment:
Q  36 aatgatgaaactttggtaccatttacgaagtatttgga--tacaa-aaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagt 132  Q
    |||||||||||||||||||||||||  ||  ||||||   || || ||||  ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  19944209 aatgatgaaactttggtaccatttaaaaaagatttggtagtagaacaaatgctctcatttgttatattcttgagagtttccgagctagttggatttgagt 19944308  T
Q  133 ctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
    ||||||| |||||||| ||| |||||||| |||||||||| ||| ||||||||||||||||    
T  19944309 ctatagaacaatatctaccatatagagttgctatgcaattcggatttgatcaagatgttcc 19944369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 19812827 - 19812935
Alignment:
Q  85 tctcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatca 184  Q
    |||||||||||||||||||||||  ||| ||||| |||||  | || |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19812827 tctcatttgttatatgcttgagatgttctgagctagttggtatcgactctatagagcaatatcttccacatagagttgctatgcaatttggaattgatca 19812926  T
Q  185 agatgttcc 193  Q
    |||||||||    
T  19812927 agatgttcc 19812935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 19951670 - 19951778
Alignment:
Q  87 tcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaag 186  Q
    |||||||||||||||||||||||||| ||||| |||||  | || |||||||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  19951670 tcatttgttatatgcttgagagtttctgagctagttggtatcgactctatagagcaatatcttccacatagagttgctatgcaatttgcaatggatcaag 19951769  T
Q  187 atgttccga 195  Q
    |||||||||    
T  19951770 atgttccga 19951778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 19858616 - 19858724
Alignment:
Q  85 tctcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatca 184  Q
    |||||||| ||||||| ||||||||||| ||||| ||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||| | |||||||    
T  19858616 tctcatttattatatgtttgagagtttctgagctagttgggtttgagtttatagagcaatatctaccacatagagttgctatgcaatttgaatttgatca 19858715  T
Q  185 agatgttcc 193  Q
    |||||||||    
T  19858716 agatgttcc 19858724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 20046819 - 20046915
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaat 291  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  20046819 aactactgcaggcccatgtctgataaaaatttgtattttccaccaagattgtttgaggcagatgttaccatgcgttatgtaaagtggtggaagcaat 20046915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 204 - 439
Target Start/End: Complemental strand, 20015611 - 20015376
Alignment:
Q  204 aggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttgtattaggtc 303  Q
    ||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||  |||| |||||||  | ||||||||||||||  ||||| ||||    
T  20015611 aggcttatatctgataaaaacttgtattttccaccaagactctttgaggcagatgtagccacacgttatgcaatgtggtggaagcaatcggtattgggtc 20015512  T
Q  304 acgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtggtattgaagt 403  Q
    ||   | ||||||||| || ||||||   ||||| ||||||   |||||||| ||||| ||||| ||| ||||||||   || | |||  ||| ||| ||    
T  20015511 acagagattttgttaagaacattgtgaagcggaagagaagtgaaagttcaaggaaacatagacctcatctaggaaaaactaacagaagcagtaatgatgt 20015412  T
Q  404 ttgtgttcagcctggattttctcccaatcttgttga 439  Q
    | ||||||  |||||||||| |||||||||||||||    
T  20015411 tggtgttccacctggattttgtcccaatcttgttga 20015376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 204 - 457
Target Start/End: Complemental strand, 20007682 - 20007429
Alignment:
Q  204 aggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttgtattaggtc 303  Q
    ||||| |||||||||||||| ||||||||||||||||||  ||||||||||| |||   ||| || ||||  ||||||||||||||| | ||||| ||||    
T  20007682 aggcttatatctgataaaaatttgtattttccaccaagatattttgaggcagctgtacgcacacgatatgcaaagtggtggaagcaagtggtattgggtc 20007583  T
Q  304 acgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtggtattgaagt 403  Q
    | | || ||||||||| ||  |||||   ||||| |||||| | | |||||| | ||| ||| | ||||||||| |||  || | |||| | ||||| ||    
T  20007582 atggcgattttgttaagaacgttgtgaagcggaagagaagtgcaatttcaaggagacatagatctcatgtaggacaatctaacagaagttggattgatgt 20007483  T
Q  404 ttgtgttcagcctggattttctcccaatcttgttgatactcttatttttggaaa 457  Q
    | ||||||  ||||||||| ||||||||||||||||| ||||| ||||||||||    
T  20007482 tggtgttccacctggatttcctcccaatcttgttgatgctcttgtttttggaaa 20007429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 19854048 - 19854152
Alignment:
Q  89 atttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagat 188  Q
    |||||| | ||||||||||||||| ||||| ||||| ||||||| ||||||||||||||| |||||||||||| ||| |||||||||| |||||||||||    
T  19854048 atttgtcacatgcttgagagtttctgagctagttgggtttgagtttatagagcaatatctaccacatagagttgctaggcaatttggatttgatcaagat 19854147  T
Q  189 gttcc 193  Q
    |||||    
T  19854148 gttcc 19854152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 19849542 - 19849648
Alignment:
Q  87 tcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaag 186  Q
    |||||||||| ||| ||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||  || ||||||| ||||| |||||||    
T  19849542 tcatttgttacatgtttgagagtttctgagctcattggatttgagtctatagagcaatatctcccacatagagtctctttgcaattcggaatggatcaag 19849641  T
Q  187 atgttcc 193  Q
    |||||||    
T  19849642 atgttcc 19849648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 20033906 - 20033800
Alignment:
Q  87 tcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaag 186  Q
    ||||||||||||||| ||||||| || ||||  |||||  | || |||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  20033906 tcatttgttatatgcatgagagtgtctgagcaagttggtatcgactctatagagcaatatcttccacatagagttgctatgcaatttggaatggatcaag 20033807  T
Q  187 atgttcc 193  Q
    |||||||    
T  20033806 atgttcc 20033800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 290
Target Start/End: Original strand, 19832569 - 19832664
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaa 290  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||| | |||||||||||||||||||| |||||||  | |||||||||||||    
T  19832569 aactactgcaggccaatatctgataaaaacttgtattttccaccaagattatttgaggcagatgttaccacacgttatgcaaggtggtggaagcaa 19832664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 195 - 457
Target Start/End: Original strand, 26653847 - 26654109
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    |||||||||||||  || ||| ||||||| |||||||||||||||||  | |||||||||||||| | || ||||||||  ||||||||||||||| | |    
T  26653847 aactactgcaggcctatttcttataaaaatttgtattttccaccaaggttgtttgaggcagatgtcatcatgcgttatgcaaagtggtggaagcaactgg 26653946  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    |||| ||||| |  | ||||||||| || ||||||   ||||| ||||||   |||||||| ||||  ||| | |||||||| |||   |  ||||||||    
T  26653947 tattgggtcatggagattttgttaagaacattgtgaaacggaagagaagtgtgagttcaaggaaacctagagctcatgtagggaaagctagcaaaagtgg 26654046  T
Q  395 tattgaagtttgtgttcagcctggattttctcccaatcttgttgatactcttatttttggaaa 457  Q
    | | ||  || ||||||  ||||||||| |||||||||||||||| |||| ||||| ||||||    
T  26654047 tgtcgattttagtgttccacctggatttcctcccaatcttgttgacactcatatttatggaaa 26654109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 19819259 - 19819350
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaa 286  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||| | |||||||||||||||||||| |||||||  | |||||||||    
T  19819259 aactactgcaggccaatatctgataaaaacttgtattttccaccaagattatttgaggcagatgttaccacacgttatgcaaggtggtggaa 19819350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 195 - 458
Target Start/End: Original strand, 19951823 - 19952086
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||| | |||||||||| |||| || || ||||||||  ||||||||| ||||||  |    
T  19951823 aactactgcaggcccatatctgataaaaatttgtattttccatcaaaaatttttgaggctgatgctagcatgcgttatgcaaagtggtgggagcaatcag 19951922  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    |||| | |  |     ||||||||| ||||||||||  | |||||||| | | ||| |||||||| | ||||| ||||||||||||   || | ||||||    
T  19951923 tattggattgcagaaattttgttaagaatattgtgcagcagaaaagaactccaagtccaagaaaagatagacctcatgtaggaaaagctaacataagtgg 19952022  T
Q  395 tattgaagtttgtgttcagcctggattttctcccaatcttgttgatactcttatttttggaaat 458  Q
    || ||  ||| ||||||  ||||||||| || |||||  |||||| |||||| | |||||||||    
T  19952023 taatgttgttggtgttccacctggatttcctaccaattgtgttgaaactcttgtctttggaaat 19952086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 20033753 - 20033657
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaat 291  Q
    ||||||||  ||| ||| |||||| |||| |||||||||||||||||| | ||||||||||||||||||||||||||||  || |||||||||||||    
T  20033753 aactactgtcggcccatctctgatgaaaatttgtattttccaccaagattatttgaggcagatgttaccacgcgttatgcaaactggtggaagcaat 20033657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 457
Target Start/End: Original strand, 26647703 - 26647965
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    |||||||| || | |||||||||||  |  |||||||| ||| | ||| ||||||||||||||||||| || |||||||  | ||||||||| ||||  |    
T  26647703 aactactgtagacgcatatctgataggagtttgtatttcccatcgagattttttgaggcagatgttactacccgttatgcaaggtggtggaaacaatcag 26647802  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    |||| ||||  || | ||||||||  || |||||||    |||| ||||| | |||||||| ||||| |||     ||||||||||   || | ||||||    
T  26647803 tattgggtcgtgatgattttgttatgaaaattgtgcagaagaaacgaagtgcaagttcaaggaaacatagagtttgtgtaggaaaagataacataagtgg 26647902  T
Q  395 tattgaagtttgtgttcagcctggattttctcccaatcttgttgatactcttatttttggaaa 457  Q
    || ||| ||| ||||||  ||||| ||| |||||||||||||||| |||||||||||||||||    
T  26647903 taatgatgttggtgttccccctggttttcctcccaatcttgttgacactcttatttttggaaa 26647965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 19990071 - 19990177
Alignment:
Q  87 tcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaag 186  Q
    |||||||||| |||  |||||||||| ||||| |||||| |||| | | |||  |||||||| |||||||||||| || ||||||||||||| |||||||    
T  19990071 tcatttgttagatgtatgagagtttctgagcttgttggaattgactttgtagttcaatatctcccacatagagttgctttgcaatttggaatggatcaag 19990170  T
Q  187 atgttcc 193  Q
    || ||||    
T  19990171 atattcc 19990177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 17115182 - 17115311
Alignment:
Q  11 ctgataagtttgaactgctttatccaa-tgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagt 109  Q
    ||||||||| || | || ||||||||| |||||||| |||||||||||| |  ||  ||||||||| ||||||  | |||||||||||||| || |||||    
T  17115182 ctgataagtgtggaatgttttatccaaatgatgaaattttggtaccattcaaaaaagatttggataaaaaaatgttgtcatttgttatatgtttcagagt 17115281  T
Q  110 ttccgagctggttggatttgagtctataga 139  Q
    ||||||||| ||||| |||||  |||||||    
T  17115282 ttccgagcttgttgggtttgacactataga 17115311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 26652186 - 26652316
Alignment:
Q  13 gataagtttgaactgctttatccaa-tgatgaaactttggtaccatttacgaagtatttgg---atacaaaaattatctcatttgttatatgcttgagag 108  Q
    ||||||| |||| || ||||||||| ||| | ||||||||||||||||| |||  ||||||   ||| | ||||  |||||||||||| |||||  ||||    
T  26652186 gataagtgtgaagtgttttatccaaatgacggaactttggtaccatttaagaaagatttggtggatatacaaatgctctcatttgttaaatgctaaagag 26652285  T
Q  109 tttccgagctggttggatttgagtctataga 139  Q
    |||| ||||| ||||||||||||||||||||    
T  26652286 tttctgagctagttggatttgagtctataga 26652316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 453
Target Start/End: Original strand, 19832696 - 19832778
Alignment:
Q  371 tgtaggaaaattaaataaaagtggtattgaagtttgtgttcagcctggattttctcccaatcttgttgatactcttatttttg 453  Q
    ||||||||| || |||  |||||||||||||| |  || ||  ||||||||||||||||||||||||||||||| ||||||||    
T  19832696 tgtaggaaattttaatgcaagtggtattgaagctgatgctctacctggattttctcccaatcttgttgatactcctatttttg 19832778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 366
Target Start/End: Original strand, 19849725 - 19849866
Alignment:
Q  225 ttgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttgtattaggtcacgacgtttttgttaacaata 324  Q
    |||||||||||||| || ||||| ||||| |||||||||   |||||||  |||||||||||||| |  ||||| |||  | | | ||||||||| ||      
T  19849725 ttgtattttccaccgaggcttttcgaggctgatgttaccgtacgttatgcaaagtggtggaagcactcggtattgggttgcaatgattttgttaagaaag 19849824  T
Q  325 ttgtgcgtcggaaaagaagttccagttcaagaaaacacagac 366  Q
    |||||||||| || |||||| | |||||||||||||| ||||    
T  19849825 ttgtgcgtcgaaagagaagtgcaagttcaagaaaacaaagac 19849866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 377 - 456
Target Start/End: Complemental strand, 20006491 - 20006412
Alignment:
Q  377 aaaattaaataaaagtggtattgaagtttgtgttcagcctggattttctcccaatcttgttgatactcttatttttggaa 456  Q
    |||||| |||| |||||||||||| ||| ||||||    ||||||| |||||||||||||||  ||||||||||||||||    
T  20006491 aaaattgaatagaagtggtattgatgttggtgttccagatggatttcctcccaatcttgttggcactcttatttttggaa 20006412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 296
Target Start/End: Original strand, 19990232 - 19990325
Alignment:
Q  203 caggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttgta 296  Q
    ||||| |||||||||| || |  ||||||||||| | ||  | |||||||||||||||||||| |||||||   ||||||||||| ||||||||    
T  19990232 caggcccatatctgatgaacatgtgtattttccatcgaggttgtttgaggcagatgttaccactcgttatgcagagtggtggaagaaatttgta 19990325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 457
Target Start/End: Complemental strand, 20033534 - 20033491
Alignment:
Q  414 cctggattttctcccaatcttgttgatactcttatttttggaaa 457  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||    
T  20033534 cctggatttcctcccaatcttgttgacactcttatgtttggaaa 20033491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 2e-56; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 8 - 194
Target Start/End: Complemental strand, 22655968 - 22655781
Alignment:
Q  8 attctgataagtttgaactgctttatcc-aatgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgag 106  Q
    ||||||||||||  || ||| ||||||| |||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||| |||| |||||    
T  22655968 attctgataagtgcgagctgttttatcctaatgatgaaattttggtaccatttaagaaggatttggatacaaaaattctctcatttgttgtatgtttgag 22655869  T
Q  107 agtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttccg 194  Q
     ||||| ||||| ||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  22655868 ggtttctgagcttgttggatttgagtctatagaaaaatatcttccacgtagagtttctatgcaatttggaattgatcaagatgttccg 22655781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 13 - 193
Target Start/End: Original strand, 11544541 - 11544722
Alignment:
Q  13 gataagtttgaactgctttatccaa-tgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagttt 111  Q
    |||||||||||| || ||||||||| ||||||||||||||||||  ||| |||| ||||||||| ||||| | ||||||||||||| |  ||||||||||    
T  11544541 gataagtttgaaatgttttatccaaatgatgaaactttggtaccgcttaagaaggatttggataaaaaaaatctctcatttgttatgtcattgagagttt 11544640  T
Q  112 ccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  11544641 ccgagctagttggttttgagtctattgagcaatatcttccacatagagttgctatgcaatttggaatggatcaagatgttcc 11544722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 22689245 - 22689139
Alignment:
Q  87 tcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaag 186  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||| ||| |||||||| |||||||    
T  22689245 tcatttgttatatgcttgagagtttctgagctagttggatttgagtctatagagcaatatctaccacatagagttgctaggcagtttggaatggatcaag 22689146  T
Q  187 atgttcc 193  Q
    |||||||    
T  22689145 atgttcc 22689139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 411
Target Start/End: Complemental strand, 22655735 - 22655526
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||||| | ||||||  |||||||||||| | |||||  | ||||||||||||| | |    
T  22655735 aactactgcagacccatatctgataaaaacttgtattttccaccaagattatttgagatagatgttaccacacattatgcaaggtggtggaagcaactgg 22655636  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    ||||   ||||||||   |||  || || |||||||||| ||| |||      |||||||| ||||| ||||| |||||||| ||||| || | ||||||    
T  22655635 tattgaatcacgacg-aattgaaaagaaaattgtgcgtcagaagaga------agttcaaggaaacatagacctcatgtagggaaatttaacagaagtgg 22655543  T
Q  395 tattgaagtttgtgttc 411  Q
    || ||||||| ||||||    
T  22655542 tactgaagttggtgttc 22655526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 36 - 193
Target Start/End: Complemental strand, 26354550 - 26354393
Alignment:
Q  36 aatgatgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtcta 135  Q
    ||||||| || || ||||||||||| |||  ||||||||| | ||||  ||||||||||||||||| |||||||||| ||||| ||||||||||| ||||    
T  26354550 aatgatgcaatttcggtaccatttaagaaagatttggataaacaaatgctctcatttgttatatgcctgagagtttctgagcttgttggatttgactcta 26354451  T
Q  136 tagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
    ||||||| ||| | |||||||||||| |||||||||||||||| ||||||||||||||    
T  26354450 tagagcagtatttgccacatagagttgctatgcaatttggaatggatcaagatgttcc 26354393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 47 - 193
Target Start/End: Original strand, 9815540 - 9815686
Alignment:
Q  47 tttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatat 146  Q
    |||||||||||||| |||  |||||||||    |||  |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| |||    
T  9815540 tttggtaccatttaagaaagatttggataagctaatgctctcatttgttatatgcttgagagtttccgagcttgttggattcgactctatagagcagtat 9815639  T
Q  147 cttccacatagagttactatgcaatttggaattgatcaagatgttcc 193  Q
     | |||||||||||| |||||||||||| ||| ||||||||||||||    
T  9815640 ttgccacatagagttgctatgcaatttgaaatggatcaagatgttcc 9815686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 195 - 439
Target Start/End: Original strand, 9815733 - 9815977
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    ||||| || ||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| || |||   | ||||||||||||||  |    
T  9815733 aactattgtaggcttatatctgatcaaaatttgtattttccaccaagactttttgaggcagatgttaccacacgatatacaatgtggtggaagcaatcgg 9815832  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    |||| ||||| | || ||||||| | || ||||||   ||||| ||||||   |||||||| ||  ||||| | |||||||||||| |  | | |||| |    
T  9815833 tattgggtcatgtcgattttgttcagaacattgtgaagcggaagagaagtcaaagttcaaggaagtacagatctcatgtaggaaaaattgacagaagttg 9815932  T
Q  395 tattgaagtttgtgttcagcctggattttctcccaatcttgttga 439  Q
    || ||| ||| || |||  |||| |||| ||||||||||||||||    
T  9815933 taatgatgttggttttccacctgaatttcctcccaatcttgttga 9815977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 38435008 - 38434912
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaat 291  Q
    |||||| |||| ||||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||| ||||||||  | ||||||||||||||    
T  38435008 aactaccgcagtctcatatttgataaaaatttgtattttccaccaagattatttgaggcagatgttaccaagcgttatgcaaggtggtggaagcaat 38434912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 38435159 - 38435055
Alignment:
Q  89 atttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagat 188  Q
    |||||||| |||||||||||||||| ||||  |||||||||| ||||| || |||||||| |||||||||| | ||||| ||||| ||||||||||||||    
T  38435159 atttgttacatgcttgagagtttcctagctaattggatttgactctattgaacaatatctaccacatagagatgctatgtaatttagaattgatcaagat 38435060  T
Q  189 gttcc 193  Q
    |||||    
T  38435059 gttcc 38435055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 195 - 439
Target Start/End: Complemental strand, 26354346 - 26354102
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    ||||| || ||||| |||| ||||| | | |||||||| ||||||||||||| |||||||||||| ||||| |||||||  | |||||||| |||||       
T  26354346 aactattgtaggcttatatttgatacagatttgtatttcccaccaagactttatgaggcagatgtaaccacacgttatgcaatgtggtggaggcaatcaa 26354247  T
Q  295 tattaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtgg 394  Q
    |||| ||||| | || ||||||||| || ||||||   ||||| ||||||   || ||||| ||||||||| | ||||| ||||||   || | ||||      
T  26354246 tattgggtcatgtcgattttgttaaaaacattgtgaagcggaagagaagtgaaagctcaaggaaacacagagctcatgttggaaaaactaacagaagtat 26354147  T
Q  395 tattgaagtttgtgttcagcctggattttctcccaatcttgttga 439  Q
    || ||| ||| ||||||  ||||||||| ||||||||||||||||    
T  26354146 taatgatgttggtgttccacctggatttcctcccaatcttgttga 26354102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 85 - 193
Target Start/End: Complemental strand, 39191550 - 39191442
Alignment:
Q  85 tctcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatca 184  Q
    ||||||||||||| |  ||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||    
T  39191550 tctcatttgttatgtcattgagagtttcggagctagttggttttgagtctattgagcaatatcttccacatagagttgctatgcaatttggaatggatca 39191451  T
Q  185 agatgttcc 193  Q
    |||||||||    
T  39191450 agatgttcc 39191442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 6e-32; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 1717766 - 1717872
Alignment:
Q  87 tcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaag 186  Q
    ||||||||||||||||||||||| || || || ||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||    
T  1717766 tcatttgttatatgcttgagagtatctgaacttgttggatttgactctatagagcagtatctgccacatagagttgctatgcaatttggaatggatcaag 1717865  T
Q  187 atgttcc 193  Q
    |||||||    
T  1717866 atgttcc 1717872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 196 - 447
Target Start/End: Original strand, 1717920 - 1718171
Alignment:
Q  196 actactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttgt 295  Q
    |||||||||||| |||||||||||||||| ||||||||||| | ||| ||||||||| | |||||||| | |||||||  | ||||||||||||||| ||    
T  1717920 actactgcaggcccatatctgataaaaaaatgtattttccatcgagattttttgagggaaatgttacctcacgttatgcaaggtggtggaagcaattggt 1718019  T
Q  296 attaggtcacgacgtttttgttaacaatattgtgcgtcggaaaagaagttccagttcaagaaaacacagaccacatgtaggaaaattaaataaaagtggt 395  Q
    ||  ||   | ||| ||||||||| || | |||||  | ||| ||| || |  ||||||  ||||  ||| |  |||||||||||   || |||||||||    
T  1718020 atctggcagcaacgattttgttaagaaaagtgtgcagcagaagagatgtgcatgttcaacgaaacctagagctgatgtaggaaaagctaacaaaagtggt 1718119  T
Q  396 attgaagtttgtgttcagcctggattttctcccaatcttgttgatactctta 447  Q
    | ||| ||| ||||||  ||||||||| |||||||||||||||| |||||||    
T  1718120 aatgatgttggtgttccacctggatttcctcccaatcttgttgacactctta 1718171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 47 - 191
Target Start/End: Original strand, 38483479 - 38483621
Alignment:
Q  47 tttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatat 146  Q
    ||||||||| |||| ||| |||||||||| | ||||  |||||||||||||||||||||||||||  ||||| ||| |||||||| |||||||||| ||     
T  38483479 tttggtaccgtttaagaaatatttggataaacaaatgctctcatttgttatatgcttgagagtttttgagcttgttagatttgagactatagagcagta- 38483577  T
Q  147 cttccacatagagttactatgcaatttggaattgatcaagatgtt 191  Q
     ||   ||||||||| ||||||||||||| || ||| ||||||||    
T  38483578 -tttgtcatagagttgctatgcaatttggtatggattaagatgtt 38483621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 292
Target Start/End: Original strand, 38483710 - 38483777
Alignment:
Q  225 ttgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatt 292  Q
    |||||| ||||||| | |||||||||||||||||| ||||| |||||||  | ||||||||| |||||    
T  38483710 ttgtatattccaccgatactttttgaggcagatgtaaccacacgttatgcaatgtggtggaaacaatt 38483777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 188
Target Start/End: Complemental strand, 12579708 - 12579559
Alignment:
Q  40 atgaaactttggtaccatttacgaagtatttggatacaaaaatta-tctcatttgttatatgcttgagagtttccgagctggttggatttgagtctatag 138  Q
    |||||| || ||||||||||| |||| ||||||||| ||||| || | | ||||  |||||||||||||| ||  ||||| ||||||||| || ||||||    
T  12579708 atgaaatttgggtaccatttaagaaggatttggataaaaaaaatactttgattttctatatgcttgagagattttgagcttgttggatttaagcctatag 12579609  T
Q  139 agcaatatcttccacatagagttactatgcaatttggaattgatcaagat 188  Q
    |||||||||||| |||||||||  |||| |||||||||||||| ||||||    
T  12579608 agcaatatcttcgacatagagtgtctatacaatttggaattgaccaagat 12579559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 40 - 188
Target Start/End: Complemental strand, 12495610 - 12495462
Alignment:
Q  40 atgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtctataga 139  Q
    |||||| || ||||||||||| |||| ||||||||| ||||||  | | ||||  |||||||||||||| ||  ||||| ||||||||| ||  ||||||    
T  12495610 atgaaatttgggtaccatttaagaaggatttggataaaaaaatactttgattttctatatgcttgagagattttgagcttgttggatttaagcgtataga 12495511  T
Q  140 gcaatatcttccacatagagttactatgcaatttggaattgatcaagat 188  Q
    ||||||||||| |||||||||  |||| |||||||||||||| ||||||    
T  12495510 gcaatatcttctacatagagtgtctatacaatttggaattgaccaagat 12495462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 12579498 - 12579411
Alignment:
Q  204 aggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaat 291  Q
    |||||||| ||| ||||||| ||||||||| ||||| |||| |||||||||||| |||||| ||||||||| ||||||||||||||||    
T  12579498 aggctcatgtctaataaaaatttgtattttgcaccatgactgtttgaggcagatattaccatgcgttatgtaaagtggtggaagcaat 12579411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 12495401 - 12495314
Alignment:
Q  204 aggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaat 291  Q
    |||||||| ||| ||||||| ||||||||| ||||| |||| |||||||||||| |||||| ||||||||| |||| |||||||||||    
T  12495401 aggctcatgtctaataaaaatttgtattttgcaccatgactgtttgaggcagatattaccatgcgttatgtaaagttgtggaagcaat 12495314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 12519205 - 12519118
Alignment:
Q  204 aggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaat 291  Q
    |||||||| ||| ||||||| ||||||||| ||||| |||| |||||||||||  |||||| ||||||||| ||||||||||||||||    
T  12519205 aggctcatgtctaataaaaatttgtattttgcaccatgactgtttgaggcagaaattaccatgcgttatgtaaagtggtggaagcaat 12519118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 12497847 - 12497956
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    |||||||  |||| ||| ||||||||||| ||||||||||||||||| || ||  ||| |||||| |||| || |||||| ||||||||||||||||| |    
T  12497847 aactactctaggcccatgtctgataaaaatttgtattttccaccaagtctgttctaggtagatgtgaccatgcattatgtaaagtggtggaagcaattgg 12497946  T
Q  295 tattaggtca 304  Q
    | ||||||||    
T  12497947 tgttaggtca 12497956  T

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Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 12521712 - 12521821
Alignment:
Q  195 aactactgcaggctcatatctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttg 294  Q
    |||||||  |||| ||| ||||||||||| ||||||||||||||||| || ||  ||| |||||| |||| || |||||| ||||||||||||||||| |    
T  12521712 aactactctaggcccatgtctgataaaaatttgtattttccaccaagtctgttctaggtagatgtgaccatgcattatgtaaagtggtggaagcaattgg 12521811  T
Q  295 tattaggtca 304  Q
    | ||||||||    
T  12521812 tgttaggtca 12521821  T

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Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 12581822 - 12581911
Alignment:
Q  102 ttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgtt 191  Q
    |||||||||||  ||||  |||||||||||| |||||||| || ||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  12581822 ttgagagtttctaagcttattggatttgagtatatagagctatgtcttcgacatacagtttttatgcaatttggaattgatcaagatgtt 12581911  T

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Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 12497726 - 12497796
Alignment:
Q  121 ttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgtt 191  Q
    |||||||||||| ||| |||| || |||||| |||||||||  ||||||||||||||||||| ||||||||    
T  12497726 ttggatttgagtatattgagctatgtcttccgcatagagtttgtatgcaatttggaattgattaagatgtt 12497796  T

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Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 121 - 191
Target Start/End: Original strand, 12521591 - 12521661
Alignment:
Q  121 ttggatttgagtctatagagcaatatcttccacatagagttactatgcaatttggaattgatcaagatgtt 191  Q
    |||||||||||| ||| |||| || |||||| |||||||||  ||||||||||||||||||| ||||||||    
T  12521591 ttggatttgagtatattgagctatgtcttccgcatagagtttgtatgcaatttggaattgattaagatgtt 12521661  T

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Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 181
Target Start/End: Complemental strand, 12519414 - 12519273
Alignment:
Q  40 atgaaactttggtaccatttacgaagtatttggatacaaaaattatctcatttgttatatgcttgagagtttccgagctggttggatttgagtctataga 139  Q
    |||||| || ||||||||||| |||| ||||||||| ||||||  | | ||||  |||||||||||||| ||  ||| | ||||||||| ||  ||||||    
T  12519414 atgaaatttgggtaccatttaagaaggatttggataaaaaaatactttgattttctatatgcttgagagattttgaggttgttggatttaagcgtataga 12519315  T
Q  140 gcaatatcttccacatagagttactatgcaatttggaattga 181  Q
    | | | |||||||||||||||  |||| ||||||| ||||||    
T  12519314 ggattttcttccacatagagtgtctattcaatttgaaattga 12519273  T

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Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 12582016 - 12582070
Alignment:
Q  250 aggcagatgttaccacgcgttatgtcaagtggtggaagcaatttgtattaggtca 304  Q
    ||||||||||||||| || |||||  ||||||||||||||||| || ||||||||    
T  12582016 aggcagatgttaccatgcattatgcaaagtggtggaagcaattggtgttaggtca 12582070  T

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Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 6397182 - 6397066
Alignment:
Q  213 tctgataaaaaattgtattttccaccaagactttttgaggcagatgttaccacgcgttatgtcaagtggtggaagcaatttgtattaggtcacgacgttt 312  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||||||| | || |||||  ||||||| ||||||||  || |||||||| |  | ||    
T  6397182 tctgataaaaatttgtattttccaccaagactgtttgaggctgatgttactatgcattatgcaaagtggtagaagcaatcggtgttaggtcatggagatt 6397083  T
Q  313 ttgttaacaatattgtg 329  Q
    ||||||| || ||||||    
T  6397082 ttgttaagaagattgtg 6397066  T

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Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 6398953 - 6399080
Alignment:
Q  62 gaagtatttggatacaaaaatta-tctcatttgttatatgcttgagagtttccgagctggttggatttgagtctatagagcaatatcttccacatagagt 160  Q
    |||| ||||||||| ||||| || | ||||||  |||||| ||||||||||  ||||| |||||| ||||||||||| || |||||| || || ||||||    
T  6398953 gaaggatttggataaaaaaaatactttcattttctatatgtttgagagtttatgagcttgttggaattgagtctataaagaaatatcatctacgtagagt 6399052  T
Q  161 tactatgcaatttggaattgatcaagat 188  Q
    | ||||||| ||||||||||| ||||||    
T  6399053 ttctatgcagtttggaattgaccaagat 6399080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 6397324 - 6397284
Alignment:
Q  114 gagctggttggatttgagtctatagagcaatatcttccaca 154  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  6397324 gagcttgttggatttgagtctatagagcaatatcttccaca 6397284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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