View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5624_low_1 (Length: 504)
Name: NF5624_low_1
Description: NF5624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5624_low_1 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 451; Significance: 0; HSPs: 24)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 13 - 486
Target Start/End: Complemental strand, 20036725 - 20036251
Alignment:
| Q |
13 |
atactggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactat |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20036725 |
atactggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactat |
20036626 |
T |
|
| Q |
113 |
ttggtgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaa |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20036625 |
ttggtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaa |
20036526 |
T |
|
| Q |
213 |
ctttgtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttca |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20036525 |
ctttgtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagacttcctttagaagttactcttgaatcacccttttacttggttca |
20036426 |
T |
|
| Q |
313 |
aattt-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttg |
411 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20036425 |
aatttgggtgtgggagaggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttg |
20036326 |
T |
|
| Q |
412 |
atgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatattct |
486 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
20036325 |
atgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgtccatatgttcgatattct |
20036251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 13 - 475
Target Start/End: Original strand, 19848986 - 19849455
Alignment:
| Q |
13 |
atactggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactat |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19848986 |
atactggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactat |
19849085 |
T |
|
| Q |
113 |
ttggtgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaa |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19849086 |
ttggtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaa |
19849185 |
T |
|
| Q |
213 |
ctttgtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttca |
312 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | || || |||||||| ||||||||||||| |||||||| |
|
|
| T |
19849186 |
ctttgtttaagaaaacaatcactgatttgtcaaaatgtcatgttggtggtgatagatttcccttggagattactcttaaatcacccttttatttggttca |
19849285 |
T |
|
| Q |
313 |
aattt-ggtgtgggaggggttcaaaaattt------acaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaag |
405 |
Q |
| |
|
||||| |||||||||| ||||||||||||| ||| |||||| |||||||| ||||||||||| ||||| |||||||| |||||||||||| || |
|
|
| T |
19849286 |
aatttgggtgtgggagaggttcaaaaatttgcaaccacagccacaaaccatgttgaccaaccatggggatcctttattgtttagatggcataaggttcag |
19849385 |
T |
|
| Q |
406 |
cccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatg |
475 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
19849386 |
gccttgaaaattgacaatgttaggttggcattagactcggctatggatgattttctttggcgtccatatg |
19849455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 17 - 486
Target Start/End: Original strand, 19956084 - 19956554
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||| | | || | |
|
|
| T |
19956084 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcttttcttgctacttggttgtcaatttttgttttccctcataaatattcttccg |
19956183 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
19956184 |
tgaaaagttatttgtttcctattgttgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagcatatataaggatttaacttt |
19956283 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatt |
316 |
Q |
| |
|
||| ||||||| || |||||||||||||||| || ||| |||||||||||| | ||| |||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
19956284 |
gttaaagaaaaaaacagttgatttgtcaaaatatcctgtgggtggtgatagatatccttcagaacttactcttcaatcacccttttacttggttcaaatt |
19956383 |
T |
|
| Q |
317 |
t-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatga |
415 |
Q |
| |
|
| ||||||||| |||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19956384 |
tgggtgtgggaaaggttcaaaaatttacagccacaacccatgttgttgaaccataggaacccttttttgtttaggtggcataaggttaagcccttgatag |
19956483 |
T |
|
| Q |
416 |
ttgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatattct |
486 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19956484 |
ttgacaatgttaggatggcattagactcggctatggatgactttctttggcgtccatatgttcgatattct |
19956554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 17 - 486
Target Start/End: Original strand, 19838393 - 19838863
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||| || || ||| || | |
|
|
| T |
19838393 |
tggatggatattttcatcgataaaggtagcgaaattgaacatgaagcttttctagctacttggttgtcaatttttgtttttcctaatcaacactcttgcg |
19838492 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
||||||| | ||||||||| |||| ||| |||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||| ||||||||||| |
|
|
| T |
19838493 |
tgaaaagctttttgtttccaattgttgttcatcttgctagaggaaattctattgctttggcaccagctgttttagctagcatatataatgatttaacttt |
19838592 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatt |
316 |
Q |
| |
|
||| ||||||| || ||||||||||||||| || ||||||| |||||| | | ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
19838593 |
gttaaagaaaaaaacagttgatttgtcaaaacatcctgttggttgtgatacatatcctttagaagttactcttcaatcacccttttacttggttcaaatt |
19838692 |
T |
|
| Q |
317 |
t-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatga |
415 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| | |
|
|
| T |
19838693 |
tgggtgtgggagaggttcaaaaatttacaaccacaaccaatgttgttgaaccagggggacccttttttgtttaggtggcataaagttaaggccttgataa |
19838792 |
T |
|
| Q |
416 |
ttgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatattct |
486 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19838793 |
ttgacaatattaggatggctttagactcggctatggatgactttctttggcgtccatatgttcgatattct |
19838863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 17 - 474
Target Start/End: Complemental strand, 20016319 - 20015861
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||| ||| || | |
|
|
| T |
20016319 |
tggatggatatgttcgctgataaaggtagtgaaattgaacatgaagcatttcttgctacttggctgtcaatttttgttttccctcataaatactcttccg |
20016220 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
||||||||| ||||||||| |||||| | |||||||||||| |||||| ||||||||| ||||| ||||| || ||||| ||||||| ||||||| ||| |
|
|
| T |
20016219 |
tgaaaagttgtttgtttccgattgctattcatcttgctagacgaaatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagttt |
20016120 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatt |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||||||| ||| |||||||| |||| |||||||||||| |
|
|
| T |
20016119 |
gtttaagaaaacaattgttgatttgtcaaaatatcatgtgggtggtgataggtatcctttagaagttacacttcaatcacccatttatttggttcaaatt |
20016020 |
T |
|
| Q |
317 |
t-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatga |
415 |
Q |
| |
|
| |||||||||| ||||||||| |||||||||||||||||||||| | || |||| |||||||| ||||||||||||||||||||| || | |||| | |
|
|
| T |
20016019 |
tgggtgtgggagaggttcaaaattttacaaccacaacccatgttgatcaatcatgaagaccctttattgtttaggtggcataaggttcaggctttgaaaa |
20015920 |
T |
|
| Q |
416 |
ttgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatat |
474 |
Q |
| |
|
|||||||||||| | ||||||||||||| ||||| ||||| |||||||||||| ||||| |
|
|
| T |
20015919 |
ttgacaatgttatggtggcattagactcagctattgatgattttctttggcgtccatat |
20015861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 17 - 483
Target Start/End: Original strand, 19951124 - 19951588
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| |||| || | ||| |
|
|
| T |
19951124 |
tggatggatattttcactgataaaggtagtgaaattgaacatgaagccttccttgttacttggttgtcactttttgtttttcctaataataaat---tgg |
19951220 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
||| |||| || | | ||||||||| | ||||||||||||||||||| ||||||||| || || |||||||||||||| ||||||||||||||||||| |
|
|
| T |
19951221 |
tgaggagttattcgctacctattgctattcatcttgctagaggaaatcctattgctttggctccagctgttttagctagcatatataaggatttaacttt |
19951320 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatt |
316 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||| |||||| |||||||||||| | |||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
19951321 |
gtttaaaaaagcaattgttgatttgtcaaaatatcatgtgggtggtgatagatatcctttagaacttactcttcaatcacccttttacttggttcaaatt |
19951420 |
T |
|
| Q |
317 |
tgg-tgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatga |
415 |
Q |
| |
|
||| | |||||| |||| |||||||||||||||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19951421 |
tggatttgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttaggtggcataaggttaagcccttgagaa |
19951520 |
T |
|
| Q |
416 |
ttgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
| || |||||||| | ||||||||| | ||||||| ||| ||| |||||||| |||||||| ||||| |
|
|
| T |
19951521 |
tccacgatgttaggttagcattagacgcagctatgggtgattttatttggcgtccatatgttagatat |
19951588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 17 - 486
Target Start/End: Original strand, 19818557 - 19819030
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
|||||||| ||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| || ||||| |
|
|
| T |
19818557 |
tggatggaaatttttattggtaaaggtaccgaaattgaacatgaagcttttcttgctacttggttatcaatttttgtttttcctcataagaa---tttgg |
19818653 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
|||||| || | |||||||| ||||||| ||||||||||||| |||| ||||||||| ||||| |||||||| |||| | ||||| ||||||| ||| |
|
|
| T |
19818654 |
tgaaaaattatctgtttcctgttgctgttaatcttgctagagggaatcctattgctttggcaccggctgttttggctaacatttataaagatttaagttt |
19818753 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaat- |
315 |
Q |
| |
|
||||||||||| ||| |||||||||||||||| | |||||||||||||||| || |||||||| |||||||| ||||||||||||| ||||||||||| |
|
|
| T |
19818754 |
gtttaagaaaaaaatagttgatttgtcaaaatattctgttggtggtgatagatttcctttagaacttactcttcaatcacccttttatttggttcaaata |
19818853 |
T |
|
| Q |
316 |
ttggtgtgggaggggttcaaaaatttacaa------ccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagccct |
409 |
Q |
| |
|
| |||||||||| ||||||||||| | ||| |||||| |||||||| | |||||||| |||||||||||||||||||||||| | ||| || ||| |
|
|
| T |
19818854 |
tgggtgtgggagaggttcaaaaatatgcaaccactgccacaaaccatgttgataaaccatggagacccttttttgtttaggtggcatgatgttcaggcct |
19818953 |
T |
|
| Q |
410 |
tgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatattct |
486 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19818954 |
tggaaattgacaatgttaggatggcattagactcggctaaggatgactttctttggcgtccatatgttcgatattct |
19819030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 24 - 483
Target Start/End: Original strand, 19812287 - 19812750
Alignment:
| Q |
24 |
atattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaag |
123 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
19812287 |
atattttcgttggtaaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaa---tatttggtgaaaaa |
19812383 |
T |
|
| Q |
124 |
ttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtttaag |
223 |
Q |
| |
|
||||||||||| || ||| | | |||||||||||| ||| ||||||||| ||||| ||||| || ||||| ||||||| ||||||| |||||||||| |
|
|
| T |
19812384 |
gtctttgtttccgatcgctattcttcttgctagagggtatcctattgctttggcaccagctgtcttggctagcatatataaagatttaagtttgtttaag |
19812483 |
T |
|
| Q |
224 |
aaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaattt-ggtgt |
322 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||||||||| || | || || |||||||| ||||||||||||||||||||||||||| ||| | |
|
|
| T |
19812484 |
aaaacaattgttgatttgtcaaaatatcctgttggtggtgatagatttcccttggagattactcttcaatcacccttttacttggttcaaatttgggttt |
19812583 |
T |
|
| Q |
323 |
gggaggggttcaaaaatttacaaccacaac------ccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatgat |
416 |
Q |
| |
|
||||| ||||||||||||| |||||||||| | |||||| | |||||||| ||||||||||||||||||||||||||||||| | ||| || |
|
|
| T |
19812584 |
gggagaggttcaaaaatttgcaaccacaacaacaaactatgttgatcaaccatggcgacccttttttgtttaggtggcataaggttacggacttatcaat |
19812683 |
T |
|
| Q |
417 |
tgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
||||||||||||| | || |||||||||||| ||||||| |||||||||||| |||||||| ||||| |
|
|
| T |
19812684 |
tgacaatgttaggttagcgttagactcggctgtggatgattttctttggcgtccatatgttagatat |
19812750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 17 - 483
Target Start/End: Original strand, 26647004 - 26647468
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||| |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||||||| ||| ||||| |
|
|
| T |
26647004 |
tggatcgatagtttcatggataaaggtagtgaaattgaacatgaagcattcctttctacttggttgtcagtttatgtttttcctcatctaaa---tttgg |
26647100 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||||||| |||| |||||||| ||||| |||||||||||||| ||||||||||||||| ||| |
|
|
| T |
26647101 |
tgaaaagttgtttgtttcctattgctgttcatcttgctagagggaatccaattgctttggcaccggctgttttagctagcttatataaggatttaagttt |
26647200 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatt |
316 |
Q |
| |
|
||||||||||||| ||||||||||| |||| | || ||||||||||||| | |||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26647201 |
gtttaagaaaacacttgttgatttgaaaaaaatttctgatggtggtgatagatatcctttggaagttactcttcaatcacccttttacttggttcaaatt |
26647300 |
T |
|
| Q |
317 |
t-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatga |
415 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||||||||| ||| | ||||| || |||||||| |||||||||||||||||||||||| ||||| | |
|
|
| T |
26647301 |
tgggtgtgggaaaggttcaaaaatttacaaccacaacccaatttgatcaaccaaggagaccctttgttgtttaggtggcataaggttaagatcttgaaaa |
26647400 |
T |
|
| Q |
416 |
ttgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
|||||| ||||| | |||| |||| |||||| | ||||| |||||||||||| | |||||| ||||| |
|
|
| T |
26647401 |
ttgacagtgttaagtgggcactagattcggctgttgatgattttctttggcgtccttatgttagatat |
26647468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 20 - 483
Target Start/End: Original strand, 26653155 - 26653615
Alignment:
| Q |
20 |
atggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtga |
119 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||| | | | | |||| |
|
|
| T |
26653155 |
atggatattttcattgactaaggtagtgaaattgaacatgatgcattccttgcagcttggttgtcaatttttgtttttcctcatatagaat---tagtga |
26653251 |
T |
|
| Q |
120 |
aaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtt |
219 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||||| |||||||||| || |||||||| |
|
|
| T |
26653252 |
aaagttctttgttttctattgctgttcatcttgctagaggaaatcctattgctttggcaccagctgttttagctagtatatataaggacttgactttgtt |
26653351 |
T |
|
| Q |
220 |
taagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaattt-g |
318 |
Q |
| |
|
||||||||||||||||| ||||||||||| | ||||||||||||||||| || |||| ||||||| ||| |||||||||||||||||||||||||| | |
|
|
| T |
26653352 |
taagaaaacaattgttggtttgtcaaaatattatgttggtggtgatagatttcctttggaagttaatctacgatcacccttttacttggttcaaatttgg |
26653451 |
T |
|
| Q |
319 |
gtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatgattg |
418 |
Q |
| |
|
||||||||| |||||| |||||| ||||||||||||| |||| | || || |||| || ||||| |||||||||||||||| |||||| || ||| |
|
|
| T |
26653452 |
gtgtgggagaggttcacaaatttgcaaccacaacccaagttgatcaatagtgaagaccattcattgttgaggtggcataaggttatgccctt-ataattt |
26653550 |
T |
|
| Q |
419 |
acaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
||||||| ||| ||||||||||||| || || ||||| |||||||||||| |||||||| ||||| |
|
|
| T |
26653551 |
acaatgtgaggttggcattagactcagcaattgatgattttctttggcgtccatatgttagatat |
26653615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 17 - 483
Target Start/End: Original strand, 20046123 - 20046587
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||| ||||| || ||| |||||||||||||| |||||||||||||||||||||| | ||| |
|
|
| T |
20046123 |
tggatggatatgttcatcgataaaggtagtgaaattgaacacgaagccttccttactacttggttgtcaatttttgtttttcctcataaaaa---tatgg |
20046219 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
|||||| || ||||||| |||||||| | |||||||||||||||||| |||||||| |||||||||||||| | ||| ||||||||||||||| ||| |
|
|
| T |
20046220 |
tgaaaaattgtttgttttctattgctattaatcttgctagaggaaatccaattgctttggcacctgctgttttgggtagcatatataaggatttaagttt |
20046319 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatt |
316 |
Q |
| |
|
|||||||| |||||| ||||| ||| ||||| || ||||||||||||||| || || | ||| ||||| || |||||||||||| ||||||||| || |
|
|
| T |
20046320 |
atttaagaacacaattattgatctgttaaaatatccggttggtggtgatagatttcctgttgaatttactattctatcacccttttatttggttcaagtt |
20046419 |
T |
|
| Q |
317 |
t-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatga |
415 |
Q |
| |
|
| |||||||||| ||||| ||| |||| |||||||||||||||| | || | | |||||||| ||||||||||||||||||||| | | |||| | |
|
|
| T |
20046420 |
tgggtgtgggagaggttcgcaaaattaccaccacaacccatgttgatcaatcccagcgaccctttattgtttaggtggcataaggttcacgcattgaaaa |
20046519 |
T |
|
| Q |
416 |
ttgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
|||| ||||||| | ||||||||||||| || | ||||| |||||||||||| |||||||| ||||| |
|
|
| T |
20046520 |
ttgataatgttaagttggcattagactcaactgtcgatgattttctttggcgtccatatgttagatat |
20046587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 17 - 398
Target Start/End: Original strand, 19989522 - 19989904
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||| |||| |||||| | | | |
|
|
| T |
19989522 |
tggatggatgttttcattgataaaggtaatgaacttgaacatgaagcatttcttgctacttggttgtcaatttttgttcatccttataaaagtcgtgttg |
19989621 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
|||| |||||||| |||| | ||||| | ||||||||||||||||||| |||||| ||||||||||| ||||| |||||| | |||||||||||| ||| |
|
|
| T |
19989622 |
tgaatagttctttctttcgtgttgctattcatcttgctagaggaaatcctattgcattagcacctgcagttttggctagtttgtataaggatttaggttt |
19989721 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatt |
316 |
Q |
| |
|
||||||| | | | ||| ||||||||||| || ||||||||||||||||||| | | || | || |||| ||||||||||||||||||||||| || |
|
|
| T |
19989722 |
acttaagaacatattagttaatttgtcaaaacttcctgttggtggtgatagacttcccatggaggctattcttcaatcacccttttacttggttcaagtt |
19989821 |
T |
|
| Q |
317 |
t-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataa |
398 |
Q |
| |
|
| ||| |||||| ||||||||||||||||||||||||||||| || | ||| ||| |||||||||||||||||||||||||| |
|
|
| T |
19989822 |
tgggtttgggagaggttcaaaaatttacaaccacaacccatgctgatcaactatgaagacccttttttgtttaggtggcataa |
19989904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 268 - 486
Target Start/End: Original strand, 19832120 - 19832339
Alignment:
| Q |
268 |
actttctttagaagttactcttgaatcacccttttacttggttcaaatttgg-tgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaac |
366 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
19832120 |
acttcctttagaagttactcttcaatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacatccacaacccatgttgttgaac |
19832219 |
T |
|
| Q |
367 |
catggggacccttttttgtttaggtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggc |
466 |
Q |
| |
|
| ||||| || ||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
19832220 |
aaaggggaaccatttttgtttaggtggcataaggttaaggccttggtaattgacaatgttaggatggcattagacttggctaaggatgactttctttggc |
19832319 |
T |
|
| Q |
467 |
gttcatatgttcgatattct |
486 |
Q |
| |
|
|| ||||||||||||||||| |
|
|
| T |
19832320 |
gtccatatgttcgatattct |
19832339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 19943720 - 19943950
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || || ||| |
|
|
| T |
19943720 |
tggatggatattttcatcgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtca--atttgtttttcctcatagatacaatgtgg |
19943817 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||| | || ||| ||||| |||||||||||||| ||||| ||||||||||||| | ||| |
|
|
| T |
19943818 |
tgaaaagttc--tgtttcctattgctgttcatcttgctagagggattcctatggctttggcacctgctgttttggctagcttatataaggatttgagttt |
19943915 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtc |
251 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||| |
|
|
| T |
19943916 |
gtttaagaaacaaattgttgatttgaaaaaatgtc |
19943950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 24840092 - 24839869
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| | | | |
|
|
| T |
24840092 |
tggatggatattttcatcgataaaggtagtgaagttgagcatgaagcatttcttgctacttggttgtcaatttttgttttccctcataaatactctctag |
24839993 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
||||| |||||||||||||| ||||||| ||||| |||||||| |||| |||| |||| |||||||||||||| ||||| ||||||| ||||||| || |
|
|
| T |
24839992 |
tgaaatgttctttgtttcctgttgctgttcatctagctagagggaatcctatttctttggcacctgctgttttggctagcttatataacgatttaaggtt |
24839893 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgattt |
240 |
Q |
| |
|
||||||||| |||||||||||||| |
|
|
| T |
24839892 |
gtttaagaacacaattgttgattt |
24839869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 27 - 240
Target Start/End: Original strand, 19853522 - 19853735
Alignment:
| Q |
27 |
ttttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttc |
126 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| | | |||||||| || |
|
|
| T |
19853522 |
ttttctttggtaaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtctatttttgtttttcctcatagatactttattgtgaaaagatc |
19853621 |
T |
|
| Q |
127 |
tttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtttaagaaa |
226 |
Q |
| |
|
|||||||||||||||| | | |||||||||||| ||| ||||||||| |||||||||||||| ||||| ||||||| ||||| | ||||||||||||| |
|
|
| T |
19853622 |
tttgtttcctattgctattcgtcttgctagaggtaatactattgctttggcacctgctgttttggctagcttatataacgatttgagtttgtttaagaaa |
19853721 |
T |
|
| Q |
227 |
acaattgttgattt |
240 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
19853722 |
aaaattgttgattt |
19853735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 19858072 - 19858306
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| | ||| | | |
|
|
| T |
19858072 |
tggatggatattttcatcgataaaggtagtgaaattgagcatgaagcatttcttgctacttggttgtcaatttttgtttttcctaatagatactttaatg |
19858171 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
||||||| |||||||||||||||||| | |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||||||| ||||| | ||| |
|
|
| T |
19858172 |
tgaaaagatctttgtttcctattgctattggtcttgctagaggaaatactatcgctttggcacctgctgttttggctagcttatataacgatttgagttt |
19858271 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtc |
251 |
Q |
| |
|
|||||||||| ||||||||| ||| |||||||| |
|
|
| T |
19858272 |
gtttaagaaacaaattgttgaattgaaaaaatgtc |
19858306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 204 - 473
Target Start/End: Original strand, 17114900 - 17115170
Alignment:
| Q |
204 |
aggatttaactttgtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactctt-gaatcaccctttt |
302 |
Q |
| |
|
||||||| ||||||||||||||||| ||| |||||||||||||| || |||| |||||||||| || ||||||||||| ||| | |||| ||||||| |
|
|
| T |
17114900 |
aggatttgactttgtttaagaaaactattattgatttgtcaaaaaatcctgtttatggtgatagatttcctttagaagttgctcgtcgaatg-ccctttt |
17114998 |
T |
|
| Q |
303 |
acttggttcaaatttgg-tgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggt |
401 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| | |||||||| |||||||| |||||||||||||||| ||| |
|
|
| T |
17114999 |
acttggttcaaatttggatgtgggagaggttcaaaaatttacaaccacaatccatgttgatcaaccatggagaccctttattgtttaggtggcatagggt |
17115098 |
T |
|
| Q |
402 |
taagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcata |
473 |
Q |
| |
|
| || || ||| ||||||||||||| | | |||||||||| ||| | ||||| |||||||||||| |||| |
|
|
| T |
17115099 |
tcaggccgtgaaaattgacaatgttaagctagcattagacttagctgtcgatgattttctttggcgtccata |
17115170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 25 - 347
Target Start/End: Original strand, 30914651 - 30914974
Alignment:
| Q |
25 |
tattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagt |
124 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||| ||| |||||||||||||| |
|
|
| T |
30914651 |
tattttcattgataaagttagtgaaattgaacatgaagcattccttactacttggttgtcaatttttgttttccctcacaaa---gatttggtgaaaagt |
30914747 |
T |
|
| Q |
125 |
tctttgtttcctattg---ctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactttgttta |
221 |
Q |
| |
|
| |||||||||||||| || | |||||||||||||| || | |||| |||||||| || ||||| |||| || ||||||| |||||||| |
|
|
| T |
30914748 |
tttttgtttcctattgcgcctattcatcttgctagagggaacattgttgcattagcaccaaaaaaattggctagcatatacaaagatttaagtttgttta |
30914847 |
T |
|
| Q |
222 |
agaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaattt-ggt |
320 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||| ||||||||||||||| | || | || ||||||||| | ||||||||| ||||||| ||||||| ||| |
|
|
| T |
30914848 |
agaaaacaatagttggtttgtcaaaatatcaagttggtggtgatagatgtcctatggaggttactcttcactcaccctttgacttggtacaaatttgggt |
30914947 |
T |
|
| Q |
321 |
gtgggaggggttcaaaaatttacaacc |
347 |
Q |
| |
|
|||||| |||| |||||||| ||||| |
|
|
| T |
30914948 |
ttgggagaggttaaaaaatttgcaacc |
30914974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 291 - 468
Target Start/End: Original strand, 19858343 - 19858521
Alignment:
| Q |
291 |
aatcacccttttacttggttcaaatttgg-tgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttag |
389 |
Q |
| |
|
||||||||||||||||| ||||| ||||| | ||||| |||||||||||||| | ||||||||||||||| | || ||||| || ||||| |||||||| |
|
|
| T |
19858343 |
aatcacccttttacttgcttcaagtttgggtttgggaaaggttcaaaaatttagagccacaacccatgttgatcaagcatggagaacctttattgtttag |
19858442 |
T |
|
| Q |
390 |
gtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgt |
468 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||||| | ||||||||||||||||||| ||||| ||| |||||||| |
|
|
| T |
19858443 |
gtggcataaggttaaggccttgaaagttgacaatgttaagttggcattagactcggctattgatgattttatttggcgt |
19858521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 87 - 241
Target Start/End: Original strand, 19971681 - 19971835
Alignment:
| Q |
87 |
tttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgt |
186 |
Q |
| |
|
||||||||||| |||||| | ||| | | ||||||||||||||||||||||||||| | ||| | | |||||| ||| ||||||||| ||||| |||| |
|
|
| T |
19971681 |
tttttgttttttctcatagatactttatagtgaaaagttctttgtttcctattgctattcatttggttagaggcaatactattgctttggcaccaactgt |
19971780 |
T |
|
| Q |
187 |
tttagctagtctatataaggatttaactttgtttaagaaaacaattgttgatttg |
241 |
Q |
| |
|
||| ||||| |||||||||||| |||| ||||||||||| ||||||||||||| |
|
|
| T |
19971781 |
tttggctagcttatataaggattgaactctgtttaagaaacaaattgttgatttg |
19971835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 483
Target Start/End: Complemental strand, 24839821 - 24839628
Alignment:
| Q |
291 |
aatcacccttttacttggttcaaatttgg-tgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttag |
389 |
Q |
| |
|
|||||||||||||| |||||||| ||||| | ||||| ||||||||||||| || |||||||||| |||| || || | |||| | | ||||| || |
|
|
| T |
24839821 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgggcaataatcgagaccatgtattgttgag |
24839722 |
T |
|
| Q |
390 |
gtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
||||||||| |||||| |||||| ||||||||||| ||| ||||||||||||| | || ||||| ||| |||||||| | ||||||| |||| |
|
|
| T |
24839721 |
gtggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagtcatcgatgattttatttggcgtccttatgttcaatat |
24839628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 483
Target Start/End: Original strand, 19943988 - 19944181
Alignment:
| Q |
291 |
aatcacccttttacttggttcaaatttgg-tgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttag |
389 |
Q |
| |
|
|||||||||||||| |||||||| ||||| | ||||| ||||||||||||| || |||||||| | |||| | || |||| |||| | | ||||| || |
|
|
| T |
19943988 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaaccaaagttgatcaataatggagaccatgtattgttgag |
19944087 |
T |
|
| Q |
390 |
gtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
||||||||| |||||| |||||| ||||||||||| || |||||||||| || ||||| |||| ||| |||| ||| | ||||||| |||| |
|
|
| T |
19944088 |
gtggcataatgttaaggccttgaaaattgacaatgtggggttggcattagattcagctatcaatgattttatttgccgtccttatgttcaatat |
19944181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 19853765 - 19853877
Alignment:
| Q |
291 |
aatcacccttttacttggttcaaatttgg-tgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttag |
389 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||| | |||| |||||| || |||||||| | |||| | ||| |||| |||| | | ||||| || |
|
|
| T |
19853765 |
aatcacccttttacttggtacaagcttgggtgtgggagagattcataaatttgcagccacaaccgaagttgatcaacaatggagaccatgtattgttgag |
19853864 |
T |
|
| Q |
390 |
gtggcataaggtt |
402 |
Q |
| |
|
||||||||||||| |
|
|
| T |
19853865 |
gtggcataaggtt |
19853877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 17 - 483
Target Start/End: Original strand, 9815037 - 9815501
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||| ||||||| || ||||||||||||||||| |||||||| || ||||||| ||||||||| | |||||||| |||||||| | ||||| |
|
|
| T |
9815037 |
tggatggattttttcatcgacaaaggtagtgaaattgagcatgaagcgttcattgctacgtggttgtcaatctttgttttaactcataaa---tctttgg |
9815133 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
||||||||||||||||| |||||||| | |||||||||||||||||| ||||||||| ||||| ||||||||||||||| | ||||| ||||||| ||| |
|
|
| T |
9815134 |
tgaaaagttctttgttttctattgctattcatcttgctagaggaaattctattgctttggcaccagctgttttagctagtatttataacgatttaagttt |
9815233 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatt |
316 |
Q |
| |
|
||||||||||||||| ||| |||||||||||| |||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9815234 |
gtttaagaaaacaatagttaatttgtcaaaattatctgttggtggtgatagatatcctttagaagttactcttcaatcacccttttacttggttcaaatt |
9815333 |
T |
|
| Q |
317 |
t-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatga |
415 |
Q |
| |
|
| |||||||||| ||||| |||||||||| ||| ||||||||||| | || || || |||||||| ||||||||||| ||||||||| || |||||| | |
|
|
| T |
9815334 |
tgggtgtgggagaggttccaaaatttacagccagaacccatgttgatcaatcacggagaccctttattgtttaggtgacataaggttcaggccttgaaaa |
9815433 |
T |
|
| Q |
416 |
ttgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||||||| |||||||||||| ||||| || ||||| |
|
|
| T |
9815434 |
ttgacaatgttaagctggcattagactcggctatggatgattttctttggcgtccatattttagatat |
9815501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 483
Target Start/End: Complemental strand, 26355045 - 26354578
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactat-ttg |
115 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| |||||||||||||||| ||| | ||||||| ||| |||||||||||||| | |||| || ||| |
|
|
| T |
26355045 |
tggatggatgttttcatggataaaggtagtgaagttgaacatgaagcattcattgttgcttggttatcaatttttgtttttcct-agaaaatgcatgttg |
26354947 |
T |
|
| Q |
116 |
gtgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactt |
215 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
26354946 |
gtgaaaagttctttgtttcctattgctattcatcttgctagaggaaattctattgctttggcaccggctgttttagctagcatatataaggatttaagcg |
26354847 |
T |
|
| Q |
216 |
tgtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaat |
315 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
26354846 |
tgtttaagaaaaccattgttgatttgtcaaaattatctgttggtggtgatagatatcctttagaagttactcttcaatcaccgttttacttggttcaaat |
26354747 |
T |
|
| Q |
316 |
tt-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatg |
414 |
Q |
| |
|
|| |||||||||| |||||||||| |||||||| |||||||||||| | |||| ||| |||||||| |||||||| ||||||| ||| | |||||| |
|
|
| T |
26354746 |
ttgggtgtgggagaggttcaaaaaattacaaccgcaacccatgttgatcaaccgtggagaccctttattgtttagatggcatagggtacaagccttgaaa |
26354647 |
T |
|
| Q |
415 |
attgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
||||||||||||| | ||| |||||||| |||||| |||| |||||||||||| ||||| || ||||| |
|
|
| T |
26354646 |
attgacaatgttaagctggaattagacttggctatcaatgattttctttggcgtccatattttagatat |
26354578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 483
Target Start/End: Original strand, 1717214 - 1717684
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |
|
|
| T |
1717214 |
tggatggatgtttttgttgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcggtttatgtttttcctcataaagc---tttgg |
1717310 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaacttt |
216 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
1717311 |
tgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaacttt |
1717410 |
T |
|
| Q |
217 |
gtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatt |
316 |
Q |
| |
|
||||||||||||||| |||| ||||||||||| || ||||||||| |||||| ||||| || |||| |||| |||||||||||||||||||||||||| |
|
|
| T |
1717411 |
gtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatt |
1717510 |
T |
|
| Q |
317 |
t-ggtgtgggaggggttcaaaaatttacaaccacaac------ccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagccct |
409 |
Q |
| |
|
| ||||| || ||||||||| ||||||| |||||| ||| | || ||||| || |||||||||| ||||||||||| || | ||| || |
|
|
| T |
1717511 |
tgggtgttgggaaggttcaaaagtttacaatcacaactaaaaaccacgatgaccaaccacggagaccctttttggtttaggtggcgtatgagtaaagact |
1717610 |
T |
|
| Q |
410 |
tgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
||| ||||| |||||||| || |||||||||| ||||| ||||| ||| |||||||| |||||||| ||||| |
|
|
| T |
1717611 |
tgaaaattgaagatgttaggttgacattagactcagctattgatgattttatttggcgtccatatgttagatat |
1717684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 114; Significance: 1e-57; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 22689773 - 22689533
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactat-ttg |
115 |
Q |
| |
|
||||||||| ||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | | |
|
|
| T |
22689773 |
tggatggatgttttcatcgataatggtaatgaatttgaacatgaagcatttcttgctacttggttgtcaatttttgtttttcctcataaaaa-tatgtcg |
22689675 |
T |
|
| Q |
116 |
gtgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactt |
215 |
Q |
| |
|
|| ||||||||||||||| ||||| || | ||||| |||||||| ||| ||||||||| |||||||||||||| ||||| ||||||||||||| | || |
|
|
| T |
22689674 |
gtcaaaagttctttgtttactatttctattcatctggctagaggcaatactattgctttggcacctgctgttttggctagcatatataaggatttgagtt |
22689575 |
T |
|
| Q |
216 |
tgtttaagaaaacaattgttgatttgtcaaaatgtcatgttg |
257 |
Q |
| |
|
||||||||||| |||||||||||| |||||||| ||||| |
|
|
| T |
22689574 |
tgtttaagaaacaaattgttgatttcaaaaaatgtcctgttg |
22689533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 22651912 - 22651781
Alignment:
| Q |
116 |
gtgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactt |
215 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||| |||||||| ||||| | |||||||||||||||| |
|
|
| T |
22651912 |
gtgaaaagttgtttgtttcctattgctgttcatcttgctagaggaaatcctattgcttttgcaccagctgttttggctagcatgtataaggatttaactt |
22651813 |
T |
|
| Q |
216 |
tgtttaagaaaacaattgttgatttgtcaaaa |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
22651812 |
tgtttaagaaaacaattgttgatttgtcaaaa |
22651781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 37 - 174
Target Start/End: Complemental strand, 22685778 - 22685644
Alignment:
| Q |
37 |
taaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcct |
136 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
22685778 |
taaaggtagtgaaattgagcatgaagcatttcttgctgcttggttgtcactttttgtttttcctcataaaa---ttttggtgaaaacttctatgtttccg |
22685682 |
T |
|
| Q |
137 |
attgctgtacatcttgctagaggaaatcgtattgcttt |
174 |
Q |
| |
|
|||||| | |||||||||||||| |||| ||||||||| |
|
|
| T |
22685681 |
attgctattcatcttgctagagggaatcctattgcttt |
22685644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 37 - 236
Target Start/End: Complemental strand, 11564232 - 11564033
Alignment:
| Q |
37 |
taaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcct |
136 |
Q |
| |
|
||||| |||| ||||||||||||||||||| || || | ||| | || ||||||||||||||||||||| || ||| | |||||||||||||||||| |
|
|
| T |
11564232 |
taaagctagtaaaattgaacatgaagcattcatttctgcatggctttccatttttgtttttcctcataaaagcttgttgatcaaaagttctttgtttcct |
11564133 |
T |
|
| Q |
137 |
attgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtttaagaaaacaattgttg |
236 |
Q |
| |
|
|||||||| ||||||||||||||||| | ||||||||||||||| | ||| | ||| | ||||||||||||| |||||||||| | |||||||||| |
|
|
| T |
11564132 |
attgctgttcatcttgctagaggaaaacctattgctttagcaccgtcggttctggcttgcttatataaggatttgcgtttgtttaaggagacaattgttg |
11564033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 22652206 - 22652119
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcata |
104 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
22652206 |
tggatggatattttcatcgataaaggtagtgaaattgaacatgaagcgttccttgctacttggttgtcaatttttgtttttgctcata |
22652119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 291 - 483
Target Start/End: Original strand, 11544344 - 11544537
Alignment:
| Q |
291 |
aatcacccttttacttggttcaaatttgg-tgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttag |
389 |
Q |
| |
|
|||||||| |||||||||||||| ||||| | |||||| ||||||||||||| |||||| |||||| |||| | ||| |||| |||| | | || | || |
|
|
| T |
11544344 |
aatcacccatttacttggttcaagtttgggtttgggagaggttcaaaaatttgcaaccaaaacccaagttgatcaacaatggagaccatgtactgatgag |
11544443 |
T |
|
| Q |
390 |
gtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
||||||| |||||| ||||||| ||||| ||||| ||| |||||||||| || |||| |||||| ||||||||||| ||||||||| |||| |
|
|
| T |
11544444 |
gtggcatttggttaaacccttgaaaattgataatgtgaggttggcattagattcagctaaggatgattttctttggcgcccatatgttcaatat |
11544537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 360
Target Start/End: Complemental strand, 22689520 - 22689450
Alignment:
| Q |
291 |
aatcacccttttacttggttcaaatttgg-tgtgggaggggttcaaaaatttacaaccacaacccatgttg |
360 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||||| ||||||||||||| ||||||| ||||||||| |
|
|
| T |
22689520 |
aatcacccttttacttggttcaagtttgggtgtgggagaggttcaaaaatttgcaaccacggcccatgttg |
22689450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 22685641 - 22685596
Alignment:
| Q |
202 |
taaggatttaactttgtttaagaaaacaattgttgatttgtcaaaa |
247 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
22685641 |
taaggatttaagtttttttaagaaaacaattgttgatttgtcaaaa |
22685596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 6398261 - 6398605
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||||| || || |||||||||||||||||||||||||||| || ||||||| |||||||| | |||||||||||||| ||||| | || || |
|
|
| T |
6398261 |
tggatggatatgtttatctataaaggtagtgaaattgaacatgaagccttccttgctaattggttgttaatttttgtttttcctagtaaaa-caat--gg |
6398357 |
T |
|
| Q |
117 |
tgaaaagttctttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctag--tctatataaggatttaact |
214 |
Q |
| |
|
||||||||| ||||||| |||||||||| |||| ||||||||||||| || | ||| ||||| |||||||||||||| | ||||||||||||||||| |
|
|
| T |
6398358 |
tgaaaagttgtttgttttctattgctgttaatctcgctagaggaaatccaatcggtttggcaccagctgttttagctagcatatatataaggatttaact |
6398457 |
T |
|
| Q |
215 |
ttgtttaag-aaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaa |
313 |
Q |
| |
|
|| |||||| |||| |||| ||||| ||||||||| |||||||| || ||||||| || || | ||| ||||||| ||||| |||||| |||||||| |
|
|
| T |
6398458 |
ttatttaagaaaaaaaattattgatatgtcaaaatatcatgttgatgatgatagatttcctgttgaatttactctgttgtcacctttttacgtggttcaa |
6398557 |
T |
|
| Q |
314 |
attt-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttg |
360 |
Q |
| |
|
||| |||||||||| |||||| ||| || |||||||||| ||||||| |
|
|
| T |
6398558 |
gtttaggtgtgggagaggttcacaaacttgcaaccacaactcatgttg |
6398605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 17 - 483
Target Start/End: Complemental strand, 6397856 - 6397390
Alignment:
| Q |
17 |
tggatggatattttcattgataaaggtagtgaaattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttgg |
116 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||| ||||||||| ||| || |||||||| |||||| ||| |
|
|
| T |
6397856 |
tggatggatatgttcatcgataaaggtagtgaaattgaacatgaagccttccttgctacctggttgtcaatttgtgcttttcctcctaaaaaaa---tgg |
6397760 |
T |
|
| Q |
117 |
tgaaaagttct--ttgtttcctattgctgtacatcttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaact |
214 |
Q |
| |
|
||||||||| | ||| || ||||| ||| |||||||||||| ||||| |||||||| ||||| ||||||| |||| |||||||||||||| || |
|
|
| T |
6397759 |
tgaaaagttttgtttgctttctattaatgttaatcttgctagagaaaatccaattgctttggcaccatctgttttggctatcatatataaggatttatct |
6397660 |
T |
|
| Q |
215 |
ttgtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaa |
314 |
Q |
| |
|
|| ||||||||||||||| |||||||||| |||| || |||||||| ||||| | || | | ||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
6397659 |
ttatttaagaaaacaattattgatttgtcgaaatatcttgttggtgatgataaatttcatgttgaatttactcttctatcacctttttacttggttcaag |
6397560 |
T |
|
| Q |
315 |
ttt-ggtgtgggaggggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgat |
413 |
Q |
| |
|
||| || |||| || |||||| | |||| | ||||||| |||||| | | ||| |||||||| || ||||||||| |||||||| || |||| | |
|
|
| T |
6397559 |
tttgggcgtggaagaggttcacacatttgcgttcacaacctatgttgattacccacatagaccctttattttttaggtggtataaggttcaggcctttaa |
6397460 |
T |
|
| Q |
414 |
gattgacaatgttaggatggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
||||||||| ||| | |||||| |||||| || | ||| | |||||||||||| |||||||| ||||| |
|
|
| T |
6397459 |
aattgacaatattaagttggcatgagactcaactgtcgataattttctttggcgtccatatgttagatat |
6397390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 49 - 260
Target Start/End: Original strand, 12581424 - 12581632
Alignment:
| Q |
49 |
aattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcctattgctgtacat |
148 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||| ||||||||||||||| || ||| |||||||||||| ||||||| |||||||| | || |
|
|
| T |
12581424 |
aattgaacatgaagccttccttgctacttggttgtcaatttttgtttttcctcgtagaaaaa---tggtgaaaagttatttgttttctattgctattaat |
12581520 |
T |
|
| Q |
149 |
cttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtttaagaaaacaattgttgatttgtcaaaat |
248 |
Q |
| |
|
||||||||| ||||||| ||| |||| | | ||||||| ||||| || |||||||||||||||| ||||||||||||||| ||||| ||||||||| |
|
|
| T |
12581521 |
cttgctagaagaaatcgaattactttgccgcaaactgttttggctagcataaataaggatttaactttatttaagaaaacaattattgatctgtcaaaat |
12581620 |
T |
|
| Q |
249 |
gtcatgttggtg |
260 |
Q |
| |
|
|| |||||||| |
|
|
| T |
12581621 |
atcttgttggtg |
12581632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 49 - 427
Target Start/End: Original strand, 12497241 - 12497616
Alignment:
| Q |
49 |
aattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcctattgctgtacat |
148 |
Q |
| |
|
||||||||||||||| || |||||||| ||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||| |||||||| | || |
|
|
| T |
12497241 |
aattgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcatagaaaaa---tggtgataagttatttgttttctattgctattaat |
12497337 |
T |
|
| Q |
149 |
cttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtttaagaaaacaattgttgatttgtcaaaat |
248 |
Q |
| |
|
||||||||| |||||| ||| |||| | || |||||||| ||||| || |||| ||||||||||| ||||||||||||||| ||||| |||||||| |
|
|
| T |
12497338 |
cttgctagaagaaatcaaattactttgccgccagctgttttggctagcataaataacgatttaactttatttaagaaaacaattattgatctgtcaaaac |
12497437 |
T |
|
| Q |
249 |
gtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatttggtgtgggaggggttcaaaaatttacaacca |
348 |
Q |
| |
|
|| | |||||| | ||| | ||||| | ||| ||||| || ||||| |||||||||||||| ||||| |||||| || || ||| || |||||| |
|
|
| T |
12497438 |
atcttattggtgataatatattttctgttgaatttacttttctctcacctttttacttggttcatgtttgggttgggagaggctcgcaaacttgcaacca |
12497537 |
T |
|
| Q |
349 |
caacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatgattgacaatgtta |
427 |
Q |
| |
|
|||| ||||||| | ||||| || | ||| ||||| ||||||||||||||| | |||||| |||| |||||||| |
|
|
| T |
12497538 |
caactcatgttgatcaaccacatagaacatttattgttgaggtggcataaggttctggccttgaaaattggcaatgtta |
12497616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 49 - 427
Target Start/End: Original strand, 12521106 - 12521481
Alignment:
| Q |
49 |
aattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcctattgctgtacat |
148 |
Q |
| |
|
||||||||||||||| || |||||||| ||||||||| |||||||||||||||||| ||| |||||| ||||| ||||||| |||||||| | || |
|
|
| T |
12521106 |
aattgaacatgaagccttccttgctacctggttgtcaatttttgtttttcctcatagaaaaa---tggtgataagttatttgttttctattgctattaat |
12521202 |
T |
|
| Q |
149 |
cttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtttaagaaaacaattgttgatttgtcaaaat |
248 |
Q |
| |
|
||||||||| |||||| ||| |||| | || |||||||| ||||| || |||| ||||||||||| ||||||||||||||| ||||| |||||||| |
|
|
| T |
12521203 |
cttgctagaagaaatcaaattactttgccgccagctgttttggctagcataaataacgatttaactttatttaagaaaacaattattgatctgtcaaaac |
12521302 |
T |
|
| Q |
249 |
gtcatgttggtggtgatagactttctttagaagttactcttgaatcacccttttacttggttcaaatttggtgtgggaggggttcaaaaatttacaacca |
348 |
Q |
| |
|
|| | |||||| | ||| | ||||| | ||| ||||| || ||||| |||||||||||||| ||||| |||||| || || ||| || |||||| |
|
|
| T |
12521303 |
atcttattggtgataatatattttctgttgaatttacttttctctcacctttttacttggttcatgtttgggttgggagaggctcgcaaacttgcaacca |
12521402 |
T |
|
| Q |
349 |
caacccatgttgttgaaccatggggacccttttttgtttaggtggcataaggttaagcccttgatgattgacaatgtta |
427 |
Q |
| |
|
|||| ||||||| | ||||| || | ||| ||||| ||||||||||||||| | |||||| |||| |||||||| |
|
|
| T |
12521403 |
caactcatgttgatcaaccacatagaacatttattgttgaggtggcataaggttctggccttgaaaattggcaatgtta |
12521481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 227
Target Start/End: Complemental strand, 12519878 - 12519704
Alignment:
| Q |
49 |
aattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcctattgctgtacat |
148 |
Q |
| |
|
||||||||||||||| || ||| |||||||||||| |||||||||||||||||||||| |||||| || || ||||||| || ||| ||| || |
|
|
| T |
12519878 |
aattgaacatgaagccttccttttaacttggttgtcaatttttgtttttcctcataaaaa----atggtgacaaattgtttgttttctgttggtgttaat |
12519783 |
T |
|
| Q |
149 |
cttgctagaggaaatcgtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtttaagaaaa |
227 |
Q |
| |
|
||||||||| |||||| |||||||| | | | |||||| ||||| || ||||||| |||||||| |||||||||| |
|
|
| T |
12519782 |
cttgctagaagaaatccaattgctttggtggcagttgttttggctagcataaataaggacttaactttatttaagaaaa |
12519704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 12580167 - 12580056
Alignment:
| Q |
49 |
aattgaacatgaagcatttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcctattgctgtacat |
148 |
Q |
| |
|
|||||||||||| || || ||| ||||||||||||| |||||||||||||||||||||| |||||| ||||| ||||||| || ||| ||| || |
|
|
| T |
12580167 |
aattgaacatgaggccttcctttttacttggttgtcaatttttgtttttcctcataaaaa----atggtgacaagttgtttgttttctgttggtgttaat |
12580072 |
T |
|
| Q |
149 |
cttgctagaggaaatc |
164 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
12580071 |
cttgctagaagaaatc |
12580056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 483
Target Start/End: Complemental strand, 39191716 - 39191664
Alignment:
| Q |
431 |
tggcattagactcggctatggatgactttctttggcgttcatatgttcgatat |
483 |
Q |
| |
|
||||||| || ||||||| |||||| |||||||||||| ||||||||| |||| |
|
|
| T |
39191716 |
tggcattggattcggctaaggatgattttctttggcgtccatatgttcaatat |
39191664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University