View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5625-Insertion-9 (Length: 518)

Name: NF5625-Insertion-9
Description: NF5625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5625-Insertion-9
NF5625-Insertion-9
[»] chr7 (31 HSPs)
chr7 (338-518)||(19590892-19591073)
chr7 (338-515)||(38859011-38859189)
chr7 (338-518)||(37787134-37787315)
chr7 (339-518)||(32004612-32004792)
chr7 (340-518)||(19830787-19830965)
chr7 (334-518)||(35288896-35289081)
chr7 (339-517)||(2658837-2659016)
chr7 (333-518)||(29099840-29100028)
chr7 (339-518)||(34533789-34533969)
chr7 (340-501)||(38858642-38858803)
chr7 (344-518)||(4641811-4641983)
chr7 (334-518)||(23952723-23952909)
chr7 (339-501)||(19830418-19830580)
chr7 (340-501)||(37786766-37786927)
chr7 (341-501)||(19590525-19590685)
chr7 (339-501)||(34534176-34534338)
chr7 (339-501)||(35289286-35289448)
chr7 (341-501)||(32004999-32005159)
chr7 (344-501)||(4641443-4641600)
chr7 (337-501)||(2659225-2659389)
chr7 (344-501)||(29100236-29100393)
chr7 (350-501)||(4478085-4478236)
chr7 (362-501)||(23953114-23953253)
chr7 (339-466)||(28583437-28583565)
chr7 (338-466)||(38160948-38161077)
chr7 (342-466)||(28584341-28584466)
chr7 (445-518)||(4477806-4477879)
chr7 (445-518)||(9393840-9393912)
chr7 (451-501)||(35579009-35579058)
chr7 (432-501)||(9181623-9181692)
chr7 (445-501)||(32427406-32427461)
[»] chr4 (64 HSPs)
chr4 (341-518)||(22434179-22434357)
chr4 (329-518)||(45082791-45082979)
chr4 (338-518)||(20470878-20471059)
chr4 (339-518)||(15523233-15523413)
chr4 (341-518)||(25447247-25447425)
chr4 (341-518)||(46193405-46193583)
chr4 (338-518)||(23494810-23494991)
chr4 (339-518)||(51021163-51021342)
chr4 (339-518)||(54995067-54995247)
chr4 (341-518)||(12234696-12234874)
chr4 (8-211)||(49707161-49707357)
chr4 (340-518)||(11153145-11153324)
chr4 (352-518)||(48526548-48526715)
chr4 (338-514)||(4219930-4220107)
chr4 (340-518)||(25938038-25938217)
chr4 (343-517)||(2118295-2118470)
chr4 (344-518)||(18751602-18751777)
chr4 (343-501)||(33109686-33109844)
chr4 (362-518)||(12503457-12503614)
chr4 (331-500)||(12234319-12234488)
chr4 (341-501)||(11153532-11153692)
chr4 (338-501)||(22434563-22434724)
chr4 (339-501)||(25447621-25447783)
chr4 (340-501)||(48526195-48526355)
chr4 (338-501)||(25937667-25937830)
chr4 (343-501)||(46193790-46193948)
chr4 (343-500)||(4219559-4219716)
chr4 (338-501)||(51020794-51020957)
chr4 (343-501)||(23494445-23494603)
chr4 (343-501)||(38962204-38962362)
chr4 (340-501)||(15523619-15523780)
chr4 (340-501)||(22170322-22170482)
chr4 (339-466)||(33109883-33110011)
chr4 (334-457)||(35363028-35363153)
chr4 (333-501)||(45082424-45082590)
chr4 (344-501)||(2118681-2118837)
chr4 (338-454)||(18763951-18764068)
chr4 (339-501)||(54995453-54995614)
chr4 (339-454)||(48713777-48713893)
chr4 (408-501)||(12503821-12503913)
chr4 (341-466)||(16691491-16691616)
chr4 (337-466)||(44892567-44892697)
chr4 (342-466)||(20958280-20958403)
chr4 (362-466)||(43243700-43243804)
chr4 (362-466)||(43281210-43281314)
chr4 (398-466)||(43242328-43242396)
chr4 (339-454)||(48293592-48293708)
chr4 (243-302)||(49707067-49707126)
chr4 (376-466)||(16690971-16691062)
chr4 (339-446)||(48708293-48708401)
chr4 (341-466)||(48294961-48295088)
chr4 (340-468)||(10258304-10258433)
chr4 (362-466)||(20957210-20957315)
chr4 (401-457)||(44220805-44220861)
chr4 (428-501)||(17504061-17504133)
chr4 (340-410)||(16318251-16318322)
chr4 (342-466)||(44890518-44890643)
chr4 (482-518)||(10795694-10795730)
chr4 (445-501)||(35193412-35193467)
chr4 (408-501)||(17504345-17504437)
chr4 (428-513)||(40160465-40160549)
chr4 (445-501)||(14439932-14439988)
chr4 (445-501)||(26974388-26974444)
chr4 (396-448)||(55189584-55189636)
[»] chr3 (68 HSPs)
chr3 (341-518)||(37727297-37727475)
chr3 (340-518)||(39555577-39555756)
chr3 (338-518)||(22424811-22424992)
chr3 (340-512)||(20840934-20841107)
chr3 (338-518)||(29801783-29801964)
chr3 (338-518)||(43973807-43973988)
chr3 (339-518)||(4275731-4275911)
chr3 (340-518)||(31778652-31778831)
chr3 (337-518)||(5137348-5137530)
chr3 (335-518)||(17464485-17464669)
chr3 (340-518)||(27393660-27393839)
chr3 (340-512)||(30098136-30098309)
chr3 (341-516)||(25853234-25853410)
chr3 (344-515)||(32534962-32535134)
chr3 (8-211)||(34548278-34548474)
chr3 (361-518)||(24300576-24300734)
chr3 (366-518)||(41047066-41047218)
chr3 (341-516)||(23644834-23645010)
chr3 (339-518)||(26837358-26837538)
chr3 (344-517)||(26274570-26274744)
chr3 (333-501)||(20840552-20840720)
chr3 (339-501)||(31779037-31779199)
chr3 (341-501)||(39555962-39556122)
chr3 (337-496)||(48452985-48453144)
chr3 (338-501)||(24300941-24301104)
chr3 (339-501)||(5136978-5137140)
chr3 (340-501)||(37726928-37727089)
chr3 (344-501)||(41046703-41046860)
chr3 (338-501)||(26837741-26837903)
chr3 (340-501)||(23644461-23644622)
chr3 (343-501)||(25853612-25853770)
chr3 (341-501)||(32535344-32535508)
chr3 (341-501)||(43973441-43973601)
chr3 (340-501)||(27393962-27394123)
chr3 (338-501)||(30104479-30104641)
chr3 (341-457)||(29801356-29801473)
chr3 (345-490)||(22425209-22425354)
chr3 (340-501)||(17464876-17465038)
chr3 (333-466)||(51474753-51474887)
chr3 (365-501)||(26274952-26275087)
chr3 (335-466)||(25612396-25612528)
chr3 (341-466)||(50116828-50116954)
chr3 (341-466)||(23228427-23228552)
chr3 (243-302)||(34548184-34548243)
chr3 (339-467)||(45965936-45966065)
chr3 (362-466)||(32697120-32697224)
chr3 (342-454)||(51473429-51473542)
chr3 (343-466)||(25420560-25420684)
chr3 (339-466)||(37220555-37220683)
chr3 (339-426)||(37222030-37222118)
chr3 (445-501)||(55192222-55192277)
chr3 (376-454)||(18010176-18010255)
chr3 (445-518)||(8873795-8873867)
chr3 (445-518)||(50900637-50900709)
chr3 (428-516)||(2323466-2323553)
chr3 (363-437)||(25419166-25419242)
chr3 (428-501)||(27200078-27200150)
chr3 (445-501)||(37075793-37075848)
chr3 (451-501)||(32730775-32730825)
chr3 (428-513)||(37076048-37076133)
chr3 (445-501)||(50662798-50662854)
chr3 (445-501)||(40839038-40839094)
chr3 (445-501)||(47431801-47431857)
chr3 (445-501)||(49407900-49407955)
chr3 (442-501)||(51828058-51828117)
chr3 (445-501)||(51828343-51828399)
chr3 (445-501)||(55389709-55389765)
chr3 (445-501)||(55389983-55390039)
[»] chr6 (41 HSPs)
chr6 (338-514)||(11445358-11445535)
chr6 (338-518)||(22219720-22219901)
chr6 (338-512)||(12935154-12935329)
chr6 (336-518)||(2319667-2319849)
chr6 (344-518)||(18504922-18505097)
chr6 (340-518)||(31470314-31470493)
chr6 (340-518)||(20741468-20741650)
chr6 (339-518)||(23075495-23075675)
chr6 (344-501)||(10899942-10900100)
chr6 (339-501)||(18257135-18257297)
chr6 (341-518)||(18257504-18257682)
chr6 (342-518)||(15827639-15827817)
chr6 (339-501)||(12935542-12935704)
chr6 (339-501)||(20741098-20741260)
chr6 (341-501)||(10900315-10900475)
chr6 (341-501)||(11276967-11277127)
chr6 (342-501)||(31470701-31470860)
chr6 (340-501)||(15828026-15828187)
chr6 (364-503)||(11276613-11276753)
chr6 (338-501)||(28472634-28472796)
chr6 (338-501)||(29859823-29859985)
chr6 (341-518)||(4811624-4811801)
chr6 (338-501)||(11444984-11445147)
chr6 (341-501)||(1149816-1149977)
chr6 (342-500)||(18505305-18505463)
chr6 (344-501)||(2322604-2322760)
chr6 (340-437)||(23073998-23074096)
chr6 (341-501)||(4811372-4811532)
chr6 (339-428)||(1149463-1149553)
chr6 (343-466)||(29033436-29033560)
chr6 (344-466)||(3835145-3835268)
chr6 (333-466)||(18296137-18296270)
chr6 (343-466)||(29035056-29035180)
chr6 (445-503)||(35163570-35163627)
chr6 (453-518)||(32836114-32836178)
chr6 (441-501)||(23074089-23074148)
chr6 (445-501)||(25472398-25472454)
chr6 (471-518)||(1149559-1149606)
chr6 (482-518)||(28473005-28473041)
chr6 (445-501)||(31073528-31073584)
chr6 (445-501)||(31573829-31573885)
[»] chr2 (42 HSPs)
chr2 (338-517)||(7446714-7446894)
chr2 (338-518)||(43058700-43058880)
chr2 (340-518)||(18450829-18451008)
chr2 (339-515)||(22374695-22374872)
chr2 (343-518)||(40815347-40815523)
chr2 (340-518)||(28616981-28617160)
chr2 (339-518)||(11090887-11091067)
chr2 (338-501)||(26538463-26538627)
chr2 (344-518)||(40027507-40027682)
chr2 (335-501)||(239347-239512)
chr2 (350-516)||(239721-239888)
chr2 (329-518)||(3025830-3026018)
chr2 (339-518)||(1978476-1978656)
chr2 (333-518)||(8425347-8425532)
chr2 (334-501)||(11090514-11090681)
chr2 (338-501)||(40815730-40815893)
chr2 (339-501)||(22374318-22374480)
chr2 (340-501)||(26538096-26538257)
chr2 (338-518)||(14432508-14432689)
chr2 (341-501)||(43058333-43058493)
chr2 (340-501)||(40027139-40027300)
chr2 (338-501)||(18451216-18451379)
chr2 (339-501)||(1978106-1978268)
chr2 (341-466)||(28616613-28616739)
chr2 (337-501)||(3025462-3025625)
chr2 (340-466)||(20444748-20444875)
chr2 (340-497)||(7446341-7446497)
chr2 (344-501)||(8425745-8425902)
chr2 (344-501)||(14432145-14432302)
chr2 (339-458)||(28847122-28847242)
chr2 (341-466)||(35779708-35779834)
chr2 (342-466)||(35781082-35781207)
chr2 (338-465)||(20440451-20440579)
chr2 (343-466)||(8972239-8972363)
chr2 (343-466)||(15551501-15551625)
chr2 (366-466)||(15552473-15552573)
chr2 (331-501)||(28143416-28143585)
chr2 (445-499)||(31797166-31797219)
chr2 (445-501)||(33920716-33920772)
chr2 (408-501)||(44219712-44219804)
chr2 (445-501)||(5560936-5560992)
chr2 (445-501)||(13399526-13399582)
[»] chr8 (32 HSPs)
chr8 (340-518)||(13225006-13225185)
chr8 (336-518)||(19176285-19176468)
chr8 (344-518)||(9928912-9929087)
chr8 (341-518)||(41681501-41681679)
chr8 (328-515)||(44831236-44831422)
chr8 (340-518)||(11656824-11657003)
chr8 (344-518)||(12572218-12572393)
chr8 (342-516)||(31133589-31133764)
chr8 (343-518)||(33328507-33328683)
chr8 (338-518)||(33742919-33743099)
chr8 (338-499)||(34540934-34541096)
chr8 (339-500)||(41681132-41681292)
chr8 (337-501)||(44831630-44831794)
chr8 (338-501)||(19176675-19176838)
chr8 (339-495)||(4629795-4629952)
chr8 (338-501)||(12571860-12572024)
chr8 (338-501)||(11656452-11656616)
chr8 (339-501)||(31133218-31133380)
chr8 (340-501)||(9930042-9930203)
chr8 (345-501)||(13224645-13224800)
chr8 (344-501)||(33328161-33328318)
chr8 (341-501)||(9178021-9178180)
chr8 (432-518)||(9177724-9177810)
chr8 (398-501)||(33743304-33743406)
chr8 (339-448)||(11336959-11337069)
chr8 (344-501)||(4630177-4630328)
chr8 (362-466)||(10918147-10918252)
chr8 (419-457)||(43958264-43958302)
chr8 (352-436)||(8074000-8074085)
chr8 (445-501)||(18805267-18805322)
chr8 (336-501)||(35427198-35427363)
chr8 (445-501)||(28254812-28254868)
[»] chr1 (46 HSPs)
chr1 (339-518)||(15173461-15173640)
chr1 (339-518)||(50970276-50970456)
chr1 (341-518)||(29869986-29870164)
chr1 (340-518)||(39154387-39154566)
chr1 (338-518)||(21856039-21856220)
chr1 (350-518)||(33143926-33144095)
chr1 (343-518)||(17433582-17433758)
chr1 (333-518)||(5539808-5539994)
chr1 (342-518)||(8678542-8678719)
chr1 (340-515)||(18984489-18984665)
chr1 (342-518)||(4636338-4636515)
chr1 (341-501)||(29307326-29307487)
chr1 (339-518)||(15646190-15646370)
chr1 (341-513)||(26859059-26859232)
chr1 (341-501)||(29306953-29307113)
chr1 (338-501)||(9019347-9019511)
chr1 (340-501)||(5540203-5540364)
chr1 (340-501)||(50970663-50970824)
chr1 (8-211)||(45883139-45883335)
chr1 (339-501)||(18984117-18984279)
chr1 (340-501)||(29869619-29869780)
chr1 (340-501)||(15646580-15646741)
chr1 (341-518)||(17112282-17112459)
chr1 (343-501)||(33144304-33144462)
chr1 (342-510)||(5962579-5962748)
chr1 (334-501)||(15173089-15173256)
chr1 (341-501)||(8678927-8679086)
chr1 (338-490)||(9018970-9019122)
chr1 (341-501)||(21856428-21856588)
chr1 (339-501)||(26859445-26859606)
chr1 (344-501)||(5962963-5963120)
chr1 (343-501)||(39154021-39154179)
chr1 (341-501)||(17433216-17433376)
chr1 (340-466)||(52268289-52268416)
chr1 (243-302)||(45883045-45883104)
chr1 (400-501)||(4636033-4636132)
chr1 (343-456)||(52269177-52269291)
chr1 (338-426)||(2733416-2733505)
chr1 (341-440)||(47827033-47827132)
chr1 (428-490)||(45048533-45048594)
chr1 (445-501)||(8229744-8229800)
chr1 (445-501)||(17088255-17088310)
chr1 (453-501)||(17088526-17088573)
chr1 (445-501)||(17641750-17641806)
chr1 (445-501)||(44954612-44954668)
chr1 (445-501)||(45048259-45048314)
[»] scaffold0951 (2 HSPs)
scaffold0951 (338-518)||(2034-2215)
scaffold0951 (339-501)||(1665-1827)
[»] chr5 (52 HSPs)
chr5 (334-518)||(5818922-5819107)
chr5 (339-518)||(19359503-19359683)
chr5 (338-518)||(8647805-8647986)
chr5 (340-518)||(8461298-8461477)
chr5 (343-518)||(14215243-14215419)
chr5 (338-518)||(24331556-24331739)
chr5 (343-518)||(2864756-2864932)
chr5 (339-518)||(18182968-18183148)
chr5 (339-501)||(2865140-2865302)
chr5 (340-518)||(29454739-29454918)
chr5 (341-518)||(164191-164368)
chr5 (341-501)||(8647438-8647598)
chr5 (341-518)||(15709336-15709513)
chr5 (339-518)||(16018954-16019134)
chr5 (338-501)||(18183354-18183517)
chr5 (341-501)||(5819314-5819474)
chr5 (339-501)||(24362221-24362383)
chr5 (340-518)||(25000456-25000635)
chr5 (341-497)||(19359136-19359292)
chr5 (338-501)||(15708968-15709130)
chr5 (340-501)||(29455127-29455288)
chr5 (338-501)||(15372258-15372421)
chr5 (343-518)||(15371873-15372052)
chr5 (339-501)||(8460928-8461090)
chr5 (333-501)||(14215628-14215796)
chr5 (366-518)||(24361862-24362014)
chr5 (338-501)||(164576-164739)
chr5 (366-518)||(24325237-24325389)
chr5 (339-501)||(14463906-14464067)
chr5 (366-501)||(24331945-24332083)
chr5 (341-466)||(7349436-7349562)
chr5 (363-501)||(25000112-25000250)
chr5 (341-457)||(4623148-4623265)
chr5 (422-502)||(14462686-14462770)
chr5 (366-466)||(6019189-6019290)
chr5 (428-518)||(10721873-10721962)
chr5 (342-466)||(4222142-4222266)
chr5 (332-466)||(7348550-7348685)
chr5 (340-466)||(16018588-16018713)
chr5 (341-466)||(4219663-4219788)
chr5 (428-518)||(27307148-27307237)
chr5 (342-457)||(6018315-6018430)
chr5 (428-518)||(28494931-28495020)
chr5 (362-466)||(4624644-4624749)
chr5 (445-516)||(41834430-41834500)
chr5 (445-501)||(27307444-27307499)
chr5 (445-501)||(28495227-28495282)
chr5 (445-501)||(32305922-32305977)
chr5 (452-518)||(16752939-16753003)
chr5 (422-466)||(13814147-13814190)
chr5 (445-501)||(28289788-28289844)
chr5 (445-501)||(28290030-28290086)
[»] scaffold0417 (2 HSPs)
scaffold0417 (341-518)||(10990-11168)
scaffold0417 (362-501)||(10642-10781)
[»] scaffold0007 (3 HSPs)
scaffold0007 (344-518)||(64672-64847)
scaffold0007 (340-501)||(64301-64462)
scaffold0007 (377-501)||(205754-205877)
[»] scaffold1223 (2 HSPs)
scaffold1223 (341-501)||(1125-1286)
scaffold1223 (343-501)||(755-912)
[»] scaffold0295 (2 HSPs)
scaffold0295 (337-501)||(4789-4953)
scaffold0295 (343-518)||(5162-5334)
[»] scaffold0157 (2 HSPs)
scaffold0157 (362-518)||(16863-17020)
scaffold0157 (408-501)||(16564-16656)
[»] scaffold0273 (2 HSPs)
scaffold0273 (339-501)||(4592-4754)
scaffold0273 (380-518)||(4242-4381)
[»] scaffold0027 (2 HSPs)
scaffold0027 (344-501)||(42172-42330)
scaffold0027 (338-501)||(42544-42706)
[»] scaffold0019 (1 HSPs)
scaffold0019 (338-501)||(134058-134221)
[»] scaffold0432 (2 HSPs)
scaffold0432 (344-500)||(10259-10414)
scaffold0432 (344-510)||(9935-10100)
[»] scaffold0176 (2 HSPs)
scaffold0176 (340-501)||(18834-18994)
scaffold0176 (341-437)||(19069-19166)
[»] scaffold1585 (1 HSPs)
scaffold1585 (342-465)||(568-692)
[»] scaffold0113 (1 HSPs)
scaffold0113 (340-466)||(28662-28789)
[»] scaffold0057 (2 HSPs)
scaffold0057 (344-466)||(61877-62000)
scaffold0057 (339-414)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (363-456)||(471-565)
[»] scaffold0168 (1 HSPs)
scaffold0168 (396-466)||(7707-7777)
[»] scaffold0076 (1 HSPs)
scaffold0076 (344-440)||(8454-8551)


Alignment Details
Target: chr7 (Bit Score: 142; Significance: 3e-74; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 19591073 - 19590892
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  19591073 ttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19590974  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590973 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 19590892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 338 - 515
Target Start/End: Complemental strand, 38859189 - 38859011
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||||||||    
T  38859189 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttt 38859090  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacct 515  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  38859089 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacct 38859011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 37787315 - 37787134
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| | ||||||| | ||||||||||||| |||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||||||    
T  37787315 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttt 37787216  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37787215 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttttggcagttttagacctacc 37787134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 32004612 - 32004792
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||||||| || | ||||| |||||||||||||||||| |||||||||||||||||||||    
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagttttaagcggttttagacctacc 32004792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 340 - 518
Target Start/End: Complemental strand, 19830965 - 19830787
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| ||||||| |||||||| ||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttaggcggttttagacctacc 19830787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 334 - 518
Target Start/End: Original strand, 35288896 - 35289081
Alignment:
Q  334 tttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatca 432  Q
    |||||| |||||||| ||||||||| |  |||| ||||||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  35288896 tttatttggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatca 35288995  T
Q  433 tttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||| ||||||||||||||| ||  |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  35288996 tttttgttgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagttttaagcggttttagacctacc 35289081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 339 - 517
Target Start/End: Original strand, 2658837 - 2659016
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||  | ||||||||||||| |||||||||||||||| ||||| |||||||| ||||||||| |||||||||||||||||||||    
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctac 517  Q
    ||| ||||||||||| ||||||| |||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttaggccgttttagacctac 2659016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 333 - 518
Target Start/End: Original strand, 29099840 - 29100028
Alignment:
Q  333 ttttattaggcttaataacac--ttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaatta 429  Q
    ||||| |||||||| ||||||  ||||| | ||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  29099840 ttttactaggcttattaacacctttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaatta 29099939  T
Q  430 tcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||||| ||||||||||||||||||| |||||||| | ||||||||| ||| ||||||||||||||||  ||||||||||||||    
T  29099940 tcatttttgttgcatttttcgtcctacctcctattttcaaaccccagaaacgtagataaatgacagttttaggaagttttagacctacc 29100028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 34533789 - 34533969
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||||||||||||  ||| |||||||||||||| |||| |||| ||||||||||||||||    
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| |||||| |||||||||||| |||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttaggcagttttagacctacc 34533969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 38858642 - 38858803
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || ||||||| |||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  38858742 ttgcatttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 38858803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 344 - 518
Target Start/End: Complemental strand, 4641983 - 4641811
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||| |||||||   |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||| ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacatacc 4641811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 334 - 518
Target Start/End: Original strand, 23952723 - 23952909
Alignment:
Q  334 tttattaggcttaataacacttttgattctcgtgttttggca-tactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatc 431  Q
    ||||||||||||||| ||||||||| | ||||||||||| |  ||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||    
T  23952723 tttattaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatc 23952822  T
Q  432 atttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||| ||| ||||||||||||||||| | |||||||| | |||||||||||||||||||| |||||||||| |||||| |||||||    
T  23952823 attttggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttaggcagttttaaacctacc 23952909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 19830418 - 19830580
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||| ||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 19830580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 37786766 - 37786927
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||| ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  37786866 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 37786927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 341 - 501
Target Start/End: Original strand, 19590525 - 19590685
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||| ||||||| |||||||| |  ||||| |||| ||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccatttt-attctccaaaaacccagagaaatgacagttttag 19590685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 34534338 - 34534176
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| | ||||||| ||||||||||||||| |||||||||||||| | |||||  |||||||||||||||||||||||||||||||||||||||    
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||  ||||||||||||||||||||    
T  34534238 gttgcatttttcgtcctaccccccatttt-attctccaaaaaaacagagaaatgacagttttag 34534176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 35289448 - 35289286
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| ||||||||||| |||| |||||||| |  ||| | |||||||||||||| | ||||||||    
T  35289348 gttgcatttttcgtcataccccccatttt-attctctaaaaacgcagagaaataatagttttag 35289286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 32005159 - 32004999
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||| |||||||||||||||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||  |||||||| |  ||||| |||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttag 32004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 344 - 501
Target Start/End: Original strand, 4641443 - 4641600
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||| |||||||||||||||| |||| ||||| ||||| |||||||||||| ||||||||||||||||||| |    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||||| |||||||| |  ||||| ||| |||||||||||| ||||||||    
T  4641543 atttttcgtcctaccccccatttt-attctccaaaaatgcagagaaatgatagttttag 4641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 337 - 501
Target Start/End: Complemental strand, 2659389 - 2659225
Alignment:
Q  337 attaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattt 435  Q
    |||||||||||| ||| ||||| | |||| |||||||| || ||| |||||||||  |||| ||||||||||||||||||||||| ||||||||||||||    
T  2659389 attaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcattt 2659290  T
Q  436 ttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||| |||||||| ||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  2659289 ttgttgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 2659225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 344 - 501
Target Start/End: Complemental strand, 29100393 - 29100236
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||  ||||||| ||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| |||||||| |||||||| |  ||||| |||||||||||||| ||||||||||    
T  29100293 attttttgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 29100236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 501
Target Start/End: Complemental strand, 4478236 - 4478085
Alignment:
Q  350 acacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcattttt 448  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||||| || |  ||||||||||||||||||||||| |||||||    
T  4478236 acacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgcattttt 4478137  T
Q  449 cgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| || | | |||||| |  ||||| |||||||||||||| ||||||||||    
T  4478136 cgtcttatccctcatttt-attctccaaaaacgcagagaaataacagttttag 4478085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 362 - 501
Target Start/End: Complemental strand, 23953253 - 23953114
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    |||||||||||   |||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||    
T  23953253 ctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtcataccccc 23953154  T
Q  461 cattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| |  ||||| |||||||||||||| ||||||||||    
T  23953153 catttt-attctccaaaaacgcagagaaataacagttttag 23953114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 28583437 - 28583565
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| |||||| || | |||| ||||| |||||||||| || ||||| ||||||||||||||||||||    
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  438 gtttcatttttcgtcctacctcccatttt 466  Q
     || |||||||||||||||| ||||||||    
T  28583537 attgcatttttcgtcctaccccccatttt 28583565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 338 - 466
Target Start/End: Original strand, 38160948 - 38161077
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | |||| |||||||| ||||||||||| |  | ||||| ||||||||||||||||||  ||||||||||||| |||||    
T  38160948 ttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttt 38161047  T
Q  437 tgtttcatttttcgtcctacctcccatttt 466  Q
    |||| |||||||||||||||  ||||||||    
T  38161048 tgttgcatttttcgtcctactccccatttt 38161077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 342 - 466
Target Start/End: Complemental strand, 28584466 - 28584341
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||  | |||||| |||||| || |||||||| ||||  || ||||||||||||||||||||  |||||||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  441 tcatttttcgtcctacctcccatttt 466  Q
      |||||||||| |||| ||||||||    
T  28584366 gtatttttcgtcttaccccccatttt 28584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 445 - 518
Target Start/End: Original strand, 4477806 - 4477879
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||| |||||||| |||||||||||||| |||||||||||||| ||  ||||||||||||||    
T  4477806 ttttagtcctacctcctattttcaaactccagaaacgcagggaaatgacagtttttggtagttttagacctacc 4477879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 518
Target Start/End: Original strand, 9393840 - 9393912
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||| |||||||| |||||||||| ||| ||||||||||||||| ||  || ||||||||||    
T  9393840 ttttagtcctacctcctattttcaa-ctccagaaacacagtgaaatgacagttttaagcaattatagacctacc 9393912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 501
Target Start/End: Original strand, 35579009 - 35579058
Alignment:
Q  451 tcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| ||| |||||||| |||||||||||||||||||||||| ||||||    
T  35579009 tcctacatcctattttcaa-ctccagaaacgcagagaaatgacatttttag 35579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 501
Target Start/End: Original strand, 9181623 - 9181692
Alignment:
Q  432 atttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| || || |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  9181623 attttttttgcagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 9181692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 32427461 - 32427406
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||| ||||| |||||||| ||| | |||||||||||||||||||||||||    
T  32427461 ttttagtccttcctcctattttcaa-ctctaaaaacgcagagaaatgacagttttag 32427406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 2e-72; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 341 - 518
Target Start/End: Original strand, 22434179 - 22434357
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |  |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 22434357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 329 - 518
Target Start/End: Complemental strand, 45082979 - 45082791
Alignment:
Q  329 ataattttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaat 427  Q
    ||||||||||  |||||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||    
T  45082979 ataattttat--ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaat 45082882  T
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45082881 tatcatttttgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacc 45082791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 20471059 - 20470878
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggt-actgccttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||| ||||||||||| | | ||||||||||||||||||||||||| |||||||||||||||    
T  20471059 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttt 20470960  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  20470959 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacc 20470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 15523233 - 15523413
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     || ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttatgcggttttagacctacc 15523413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 341 - 518
Target Start/End: Original strand, 25447247 - 25447425
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttaggcagttttagacctacc 25447425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 341 - 518
Target Start/End: Original strand, 46193405 - 46193583
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacggttttagatctacc 46193583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 23494991 - 23494810
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||||||| ||| ||| |||| ||||||||||| | ||||||| || |||||||||||||||||||||||    
T  23494891 tgttgcatttttcgtcctacatcctattctcaaactccagaaacgtaaagaaatggcaattttaggcggttttagacctacc 23494810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 51021342 - 51021163
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||||| |||| ||||| |||||||||| ||||||||||||||| ||||||||||||     
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt- 51021244  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttaggcggttttagacctacc 51021163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 54995067 - 54995247
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||| ||||| ||||||||| | ||||||| ||||| ||||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||    
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||||||||||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttaggcggttttagacctacc 54995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 341 - 518
Target Start/End: Complemental strand, 12234874 - 12234696
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| | ||||||| | ||||||||||||| |||||||||||||| |  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttaggcagttttagacctacc 12234696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 49707357 - 49707161
Alignment:
Q  8 agatggtgaaggaagagagagtgagcagcaataagagggagacgacggccatgacaagcatgtggaaggaggtcgaacaacggcgacgaaaacgaagaca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  49707357 agatggtgaaggaagagagagtgagcagcaataagagggagacgacggcgatgacaagcatgtggaaggaggtcgaacaacggcga-ggaaacggagaca 49707259  T
Q  108 ttggggaacgacgacggcggagatggcgaggagggccgagaacagtggtgtnnnnnnnnnnnncggatatgattttgtttagagatagaaaataaaatta 207  Q
     ||||||||| |||||||      |||||||||||||||||||||||||||            ||||| |||||||||||||||||||||||||||||||    
T  49707258 ctggggaacggcgacggc------ggcgaggagggccgagaacagtggtgtgagagagagagacggatctgattttgtttagagatagaaaataaaatta 49707165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 340 - 518
Target Start/End: Original strand, 11153145 - 11153324
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| | ||||||| | ||||||||||||| ||||||| ||| ||||  |||| |||||||| |||| |||||||||||||||||||||||||||    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttaggcggttttagacctacc 11153324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 352 - 518
Target Start/End: Complemental strand, 48526715 - 48526548
Alignment:
Q  352 acttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcg 450  Q
    ||||||| | ||||||||||||  ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  48526715 acttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgcatttttcg 48526616  T
Q  451 tcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||    
T  48526615 tcctacctcctattttcaaactccataaacacagagaaatgacagttttaggcggttttagacctacc 48526548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 338 - 514
Target Start/End: Complemental strand, 4220107 - 4219930
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||| ||||| ||||||||| | ||||||||||||| |||||||||||||| | |||| ||||||||||||||||||| |||| |||||||||||||||    
T  4220107 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttt 4220008  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacc 514  Q
    |||| ||||||||||||||||||| |||||||| || || |||||||||||||| |||||||||||||||||||||||    
T  4220007 tgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttaggcggttttagacc 4219930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 340 - 518
Target Start/End: Complemental strand, 25938217 - 25938038
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | || |||||||||| ||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||| ||||||||||| |||||||| |||||||||| || ||||||| |||||||| |||||||||||||||||    
T  25938117 ttgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagttttatgcggttttagacctacc 25938038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 517
Target Start/End: Original strand, 2118295 - 2118470
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | || |||||||||| ||||||||||| |||| ||||| |||||||||| |||||||  |||||||||||||||||||||||     
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctac 517  Q
    ||||||||||||||||||| |||||||| || |||||||||||||||||  |||||||||||||||||||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttaggcggttttagacctac 2118470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 344 - 518
Target Start/End: Original strand, 18751602 - 18751777
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||| ||||||  ||||||||  |||| ||||||||||||||||||||||||||||| ||||||||||||| |    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||||| |||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttaggcggttttagacttacc 18751777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 343 - 501
Target Start/End: Original strand, 33109686 - 33109844
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||| ||||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||     
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  33109786 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 33109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 362 - 518
Target Start/End: Original strand, 12503457 - 12503614
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    ||||||||||| | |||||||||||||| | | ||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  12503457 ctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcc 12503556  T
Q  461 cattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  12503557 tattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacc 12503614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 331 - 500
Target Start/End: Original strand, 12234319 - 12234488
Alignment:
Q  331 aattttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaatta 429  Q
    ||||| |||||||||||| ||||||||| | ||| ||||||||| || ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  12234319 aatttaattaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatta 12234418  T
Q  430 tcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtttta 500  Q
    ||||||||||| |||||||||||||||| |||||||| |  ||||| |||||||||||||| |||||||||    
T  12234419 tcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtttta 12234488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 11153692 - 11153532
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | ||||||||||||||||  ||||||| |  ||||| |||||||||||||| ||||||||||    
T  11153592 tgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaataacagttttag 11153532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 22434724 - 22434563
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgccttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    ||||| ||||| ||| ||||| | ||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||||    
T  22434724 ttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaacagaacaaaacggtcattcaattatcattttt 22434625  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  22434624 gttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 22434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 25447783 - 25447621
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| |  |||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| ||||||||||||||||  ||||||| |  ||||| |||||||||||||| ||||||||||    
T  25447683 gttgcatttttcgtcctaccctccatttt-attctccaaaaacgcagagaaattacagttttag 25447621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 48526195 - 48526355
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| ||||||||||||| | |||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| ||| |||||||||||||||||||||    
T  48526295 ttgcatttttcgtcctacc-cccatttt-attctccaaaaatgcagagaaatgacagttttag 48526355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 25937667 - 25937830
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||| ||||| | |||||||||| || |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  25937667 ttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 25937766  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||| |||||  | |||||||| |  ||||| |||||||||||||||||||||||||    
T  25937767 tgttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 25937830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 343 - 501
Target Start/End: Complemental strand, 46193948 - 46193790
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | ||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||| ||     
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||| |||||||| |  ||||| ||||| |||||| ||||||||||||    
T  46193848 catttttcgtcctaccccccatttt-attctccaaaaacgtagagaattgacagttttag 46193790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 343 - 500
Target Start/End: Original strand, 4219559 - 4219716
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||| ||||| | ||||||||||||| |||||||||||||||| ||||| |||||||| | |||||||| |||||||||||||||||||||||     
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtttta 500  Q
    |||||||||||||||| |||||||| |  ||||| ||||||||||||||||||||||||    
T  4219659 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 4219716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 51020794 - 51020957
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||||| ||| |||||||||  | |||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  51020794 ttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttt 51020893  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| |||||||| |  || || ||||| |||||||||||||||||||    
T  51020894 tgttgcatttttcgtcctaccccccatttt-attcttcaaaaacgtagagaaatgacagttttag 51020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 343 - 501
Target Start/End: Original strand, 23494445 - 23494603
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||| ||||| | ||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| |||||||||||||||||||||| ||     
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||| |||||||| |  ||||| | |||||||||||||||||||||||    
T  23494545 catttttcgtcctaccccccatttt-attctccaaacacgcagagaaatgacagttttag 23494603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 343 - 501
Target Start/End: Complemental strand, 38962362 - 38962204
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||| ||||| | ||||||||||||  || ||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||     
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||| |||||||| |  || || |||||||||||||||||||||||||    
T  38962262 catttttcgtcctaccccccatttt-attcttcaaaaacgcagagaaatgacagttttag 38962204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 15523780 - 15523619
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| |  |||||||||||  |||||||||||||||| ||||| |||||||||| ||||||| |||||||||| |||||||||||    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| ||||||| |||||||||||||||||    
T  15523680 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttag 15523619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 22170482 - 22170322
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||| | |||| |||||| || | ||||||||| |||||| |||||||||||| |||||||||||||||||    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  22170383 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 22170322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 466
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||| ||||||||| | ||||||||| |||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  438 gtttcatttttcgtcctacctcccatttt 466  Q
    ||| ||||||||||||||||||| |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 334 - 457
Target Start/End: Complemental strand, 35363153 - 35363028
Alignment:
Q  334 tttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-ctttt-aaaacagaacaaaacggtccttcaattatc 431  Q
    |||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||| |||| ||||| |||| | |||||||||||| ||||||||||    
T  35363153 tttatttggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatc 35363054  T
Q  432 atttttgtttcatttttcgtcctacc 457  Q
    ||||||||| |||||||||| |||||    
T  35363053 atttttgttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 333 - 501
Target Start/End: Original strand, 45082424 - 45082590
Alignment:
Q  333 ttttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatc 431  Q
    |||||||||| ||||| || |||||| |  |||||||||||  |||||||||| |||||  |||| |||||||| |||||||||||||||||||||||||    
T  45082424 ttttattaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatc 45082522  T
Q  432 atttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||| |||||||||||||||| |||||||| |  ||||| |||| ||||||||||||| ||||||    
T  45082523 atttttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacacagagaaatgacaattttag 45082590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 344 - 501
Target Start/End: Complemental strand, 2118837 - 2118681
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| |  |||||||||||| | |||| ||||||||| ||  |||||||||||| |||||||||||| ||||||||||||||||||| |    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||||| |||||||| |  ||||| |||||||||||||| | ||||||||    
T  2118737 atttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaataatagttttag 2118681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    |||| |||||| ||||||||| | ||||||||||||| ||||||||||||||||  || |||||||||||||||||||| |||| ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  437 tgtttcatttttcgtcct 454  Q
    |||| |||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 54995614 - 54995453
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||| ||||| ||||||||| | ||||||||||||| |||||||||||||| |  |||| |||||||| |||||||||||||||||||| ||||| ||||    
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-tttt 54995516  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||| | |||||||| |  ||| | ||||||| |||||||| ||||||||    
T  54995515 gttgcatttttcgtcctaacccccatttt-attctctaaaaacgcaaagaaatgatagttttag 54995453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 339 - 454
Target Start/End: Complemental strand, 48713893 - 48713777
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||| ||||| |||||||| ||||||||||||| || |||||| |||| ||||  ||| |||||||||||||||||||  ||||||||||||||||||||    
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  438 gtttcatttttcgtcct 454  Q
    ||| |||||||||||||    
T  48713793 gttgcatttttcgtcct 48713777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 408 - 501
Target Start/End: Complemental strand, 12503913 - 12503821
Alignment:
Q  408 gaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 12503821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 341 - 466
Target Start/End: Complemental strand, 16691616 - 16691491
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    |||||||| ||||||||||| |  |||||||| | ||||||||||| |||| |||||| || ||||| |||||||  |||||| |||||| |||||||||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaacataacaaaattgtcctttaattattatttttgtt 16691517  T
Q  441 tcatttttcgtcctacctcccatttt 466  Q
     ||||||||||| |||||||||||||    
T  16691516 gcatttttcgtcatacctcccatttt 16691491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 466
Target Start/End: Complemental strand, 44892697 - 44892567
Alignment:
Q  337 attaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattt 435  Q
    |||| ||||||| | | ||||| | ||||||||||| | ||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  |||    
T  44892697 attaagcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatatttt 44892598  T
Q  436 ttgtttcatttttcgtcctacctcccatttt 466  Q
    ||||| ||||||||||||||||  |||||||    
T  44892597 ttgttgcatttttcgtcctaccctccatttt 44892567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 342 - 466
Target Start/End: Complemental strand, 20958403 - 20958280
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||  | ||||| ||||||| ||||||||||| |||| ||||| |||||||||||||||||   |||||||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  441 tcatttttcgtcctacctcccatttt 466  Q
     ||||||| |||||||| ||||||||    
T  20958303 gcattttt-gtcctacc-cccatttt 20958280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 43243804 - 43243700
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    ||||||||||||| ||||||||||| ||||  |||| ||||||||||||||||||  || |||||||||||||||||||| ||||||| |||||||| ||    
T  43243804 ctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc-cc 43243706  T
Q  461 catttt 466  Q
    ||||||    
T  43243705 catttt 43243700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 43281314 - 43281210
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    ||||||||||||| ||||||||||| ||||  |||| ||||||||||||||||||  || |||||||||| ||||||||| |||||||||||||||| ||    
T  43281314 ctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctaccccc 43281216  T
Q  461 catttt 466  Q
    ||||||    
T  43281215 catttt 43281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 398 - 466
Target Start/End: Original strand, 43242328 - 43242396
Alignment:
Q  398 ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccatttt 466  Q
    ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||| |||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaatttt 43242396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 339 - 454
Target Start/End: Original strand, 48293592 - 48293708
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||||||| || | ||| || ||||||||| |||||||  || |||||||||||||||||    
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  438 gtttcatttttcgtcct 454  Q
    ||| |||||||| ||||    
T  48293692 gttgcatttttcatcct 48293708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 49707126 - 49707067
Alignment:
Q  243 ggcatgactggactcatgttttaattataaaatatgtcatccaaagtggtataagggtgt 302  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49707126 ggcatgactgaactcatgttttaattataaaatatgtcatccaaaatggtataagggtgt 49707067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 376 - 466
Target Start/End: Original strand, 16690971 - 16691062
Alignment:
Q  376 tactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccatttt 466  Q
    ||||||||||| |||| |||||| ||||||||| |||||||   |||||||||||||||||||||| |||||||||||||||| || |||||    
T  16690971 tactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgcatttttcgtcctacccccgatttt 16691062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 446
Target Start/End: Original strand, 48708293 - 48708401
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | |  |||||||||| ||  ||||||| || | ||||| |||||||||| |||||||| ||||||||||||||||||||    
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  438 gtttcattt 446  Q
    ||| |||||    
T  48708393 gttgcattt 48708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 341 - 466
Target Start/End: Complemental strand, 48295088 - 48294961
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||| ||||| |  ||||||||||   ||||||||||| ||||  ||||| ||||||||| |||||||  ||| ||||||||||||||||||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  440 ttcattttt-cgtcctacctcccatttt 466  Q
    | ||||||| ||||||||| ||||||||    
T  48294988 tgcatttttccgtcctaccccccatttt 48294961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 468
Target Start/End: Complemental strand, 10258433 - 10258304
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | |||||||| |||| |||||| |||| |||| ||||| ||||||||||||  ||||  ||  |||||||||||||||||    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  439 tttcatttttcgtcctacctcccattttca 468  Q
    || || |||| ||| |||| || |||||||    
T  10258333 ttgcagttttagtcttaccccctattttca 10258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 466
Target Start/End: Original strand, 20957210 - 20957315
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    |||| |||||||| ||||||||||| ||||  | | ||||||||||| |||||||  ||||||||||||||| ||||||| ||||||||||| |||  ||    
T  20957210 ctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcatttttcgtcatactccc 20957309  T
Q  461 catttt 466  Q
    ||||||    
T  20957310 catttt 20957315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 401 - 457
Target Start/End: Complemental strand, 44220861 - 44220805
Alignment:
Q  401 taaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacc 457  Q
    |||||||||||||||  |||||||| ||||||||||||||||||||||||| |||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacc 44220805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 428 - 501
Target Start/End: Original strand, 17504061 - 17504133
Alignment:
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| ||| || || |||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  17504061 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttag 17504133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaa 410  Q
    ||||||||| ||||||||| | ||||||||||||| ||||||| |||||| | ||| |||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 466
Target Start/End: Original strand, 44890518 - 44890643
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||| ||||| | || |||||||| | || |||||||| ||||  |||| ||||||||||||||||||   ||||| ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  441 tcatttttcgtcctacctcccatttt 466  Q
     |||||||| || |||| ||||||||    
T  44890618 gcatttttcatcataccccccatttt 44890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 482 - 518
Target Start/End: Complemental strand, 10795730 - 10795694
Alignment:
Q  482 cagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||||||||||||||| ||||||||||||||    
T  10795730 cagagaaatgacagttttaggcagttttagacctacc 10795694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 35193412 - 35193467
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||| |||||||| || ||||||||||||||||||||||||||||    
T  35193412 ttttagtcctatctcctattttcaa-cttcagaaacgcagagaaatgacagttttag 35193467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 501
Target Start/End: Complemental strand, 17504437 - 17504345
Alignment:
Q  408 gaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||| |||||| || ||| || ||| || || |||| || |||||||| |||||  | ||| |||||||||||||||||||||||||||    
T  17504437 gaacaaaaccgtccttaaactat-atgttttttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagttttag 17504345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 513
Target Start/End: Complemental strand, 40160549 - 40160465
Alignment:
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagac 513  Q
    |||||| ||| || || |||| ||| ||||||| |||||||| ||||||||||| |||||||   ||||||||||| |||||||||    
T  40160549 tatcatgttttttgcagttttagtcttacctcctattttcaa-ctccagaaacgtagagaaaatgcagttttaggcagttttagac 40160465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 14439932 - 14439988
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  14439932 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 14439988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 26974388 - 26974444
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  26974388 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 26974444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 55189584 - 55189636
Alignment:
Q  396 ccttttaaaacagaacaaaacggtccttcaattatcatttttgtttcattttt 448  Q
    |||||||||| |||||||||  ||| ||||||||||||||||| | |||||||    
T  55189584 ccttttaaaatagaacaaaattgtctttcaattatcatttttgctacattttt 55189636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 4e-70; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 341 - 518
Target Start/End: Complemental strand, 37727475 - 37727297
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 37727297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 340 - 518
Target Start/End: Original strand, 39555577 - 39555756
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 39555756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 338 - 518
Target Start/End: Original strand, 22424811 - 22424992
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| |||||||||||  || |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  22424811 ttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttt 22424910  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22424911 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaggcggttttagacctacc 22424992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 340 - 512
Target Start/End: Complemental strand, 20841107 - 20840934
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttaga 512  Q
    || ||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttaga 20840934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 29801964 - 29801783
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||||| ||||| ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  29801964 ttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 29801865  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  29801864 tgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagacggttttagacctacc 29801783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 43973988 - 43973807
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  43973988 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 43973889  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43973888 tgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacc 43973807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 4275911 - 4275731
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||||||||||    
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttaggcggttttagacctacc 4275731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 340 - 518
Target Start/End: Original strand, 31778652 - 31778831
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||  |||||| ||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 31778831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 337 - 518
Target Start/End: Complemental strand, 5137530 - 5137348
Alignment:
Q  337 attaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattt 435  Q
    |||||||||||| ||||||||| | ||||||||||||| |||||| ||||||||| ||||| |||||||| ||||||||| |||||||||||||||||||    
T  5137530 attaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcattt 5137431  T
Q  436 ttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||| ||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5137430 ttgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 5137348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 335 - 518
Target Start/End: Original strand, 17464485 - 17464669
Alignment:
Q  335 ttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcat 433  Q
    |||||||||||||| ||||||||| | ||||||||||||| || || ||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  17464485 ttattaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 17464584  T
Q  434 ttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||| | |||||||||||||||||||||| |||||||||||    
T  17464585 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttaggcggtgttagacctacc 17464669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 340 - 518
Target Start/End: Original strand, 27393660 - 27393839
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||| | ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || |||||||||||||||| || |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttaggcagttttagacctacc 27393839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 340 - 512
Target Start/End: Complemental strand, 30098309 - 30098136
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||| ||||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttaga 512  Q
    || ||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttaggcggttttaga 30098136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 341 - 516
Target Start/End: Original strand, 25853234 - 25853410
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| ||||||||||| ||||  |||| |||||||| |||||||||||||||||||||||||||||||||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagaccta 516  Q
    | |||||||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttaggcggttttagaccta 25853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 344 - 515
Target Start/End: Original strand, 32534962 - 32535134
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacct 515  Q
    |||||||||||||||||| |||||||| ||| |||| | ||||||||||||||||||||||||||||| ||||    
T  32535062 atttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttaggcggttttatacct 32535134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 34548474 - 34548278
Alignment:
Q  8 agatggtgaaggaagagagagtgagcagcaataagagggagacgacggccatgacaagcatgtggaaggaggtcgaacaacggcgacgaaaacgaagaca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  34548474 agatggtgaaggaagagagagtgagcagcaataagagggagacgacggcgatgacaagcatgtggaaggaggtcgaacaacggcga-ggaaacggagaca 34548376  T
Q  108 ttggggaacgacgacggcggagatggcgaggagggccgagaacagtggtgtnnnnnnnnnnnncggatatgattttgtttagagatagaaaataaaatta 207  Q
     ||||||||| |||||||      |||||||||||||||||||||||||||            ||||| |||||||||||||||||||||||||||||||    
T  34548375 ctggggaacggcgacggc------ggcgaggagggccgagaacagtggtgtgagagagagagacggatctgattttgtttagagatagaaaataaaatta 34548282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 361 - 518
Target Start/End: Original strand, 24300576 - 24300734
Alignment:
Q  361 tctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctc 459  Q
    |||||||||||||| || ||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||| || ||||||||| |||||    
T  24300576 tctcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgcaattttcgtcccacctc 24300675  T
Q  460 ccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24300676 ctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 24300734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 366 - 518
Target Start/End: Complemental strand, 41047218 - 41047066
Alignment:
Q  366 tgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccatt 464  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||    
T  41047218 tgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgcatttttcgtcctacctcctatt 41047120  T
Q  465 ttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41047119 ttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacc 41047066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 341 - 516
Target Start/End: Complemental strand, 23645010 - 23644834
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| | ||||||| | ||||||||||||| ||||||||||| |||| || || ||||||||||||||||||||||| ||||||||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagaccta 516  Q
    | |||||||| |||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttaggcggttttagaccta 23644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 26837358 - 26837538
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||| ||||| ||| ||||| | || || ||||||| ||||||||||| |||| ||||| ||||| |||| ||| |||||||||||||||||||||||||    
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 26837538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 344 - 517
Target Start/End: Original strand, 26274570 - 26274744
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||| ||||||| || || ||||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctac 517  Q
    |||||||||| ||||||| |||||||| ||||||||||||||  ||||||||||||||||| |||||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttaggcagttttagacctac 26274744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 333 - 501
Target Start/End: Original strand, 20840552 - 20840720
Alignment:
Q  333 ttttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatc 431  Q
    |||| ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  20840552 ttttcttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatc 20840651  T
Q  432 atttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||| |||||||||||||||| |||||||| |  ||||  |||||||||||||||||||||||||    
T  20840652 atttttgttgcatttttcgtcctaccccccatttt-attctccttaaacgcagagaaatgacagttttag 20840720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 31779199 - 31779037
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||| ||| |||||||| |  ||||| ||||||||||||||| |||||||||    
T  31779099 gttgcatttttcgtcccaccccccatttt-attctccaaaaacgcagagaaatgtcagttttag 31779037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 39556122 - 39555962
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||| ||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 39555962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 337 - 496
Target Start/End: Original strand, 48452985 - 48453144
Alignment:
Q  337 attaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattt 435  Q
    ||||||||| || ||||||||| |  |||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  48452985 attaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattt 48453084  T
Q  436 ttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagt 496  Q
    ||||| |||||||||||||||| |||||||| |  ||||| ||||||||||||||||||||    
T  48453085 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 24301104 - 24300941
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| ||||||||||| |||| ||||| |||||||||| |||||||||||||||| | |||||||||    
T  24301104 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttt 24301005  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  24301004 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 24300941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 5136978 - 5137140
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||| ||||| ||||||||| | |||||||||||||  |||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5137140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 37726928 - 37727089
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||  | || ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  37727028 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 37727089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 344 - 501
Target Start/End: Original strand, 41046703 - 41046860
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||| || | |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 41046860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 26837903 - 26837741
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgccttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    ||||||||||| ||||||||| | ||||||||||||| |||| ||||||||||| ||||| ||||||| |||||||||||||| ||||| ||||||||||    
T  26837903 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgccctttaaaatagaacaaaacggtcattcaagtatcattttt 26837804  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| ||||||| |||||||| |||||||| |  ||||| ||| |||||||||||||||||||||    
T  26837803 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 26837741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 23644461 - 23644622
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||| ||||||| ||||||||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| |||||||||||||| | ||||||||    
T  23644561 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataatagttttag 23644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 343 - 501
Target Start/End: Complemental strand, 25853770 - 25853612
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||||| |||||||||||   ||||||||||||||||  || | |||||||||||||||||| ||||||||||||||||||||||||     
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||| |||||||| |  ||||| |||||||||||||| ||||||||||    
T  25853670 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 25853612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 32535508 - 32535344
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatc-----att 434  Q
    |||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||     |||    
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  435 tttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||| ||||||||    
T  32535408 tttgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgatagttttag 32535344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 341 - 501
Target Start/End: Original strand, 43973441 - 43973601
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||| | ||||||||||| || |  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||| |||||||| |  ||||| ||||||||| |||| ||||||||||    
T  43973541 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagataaataacagttttag 43973601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 27394123 - 27393962
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||  ||| ||||||||| |||||||||||||||| ||||||||||||||||||||    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||| | ||||||| |||| ||| |  ||||| |||||||||||||| ||||||||||    
T  27394023 ttgcattttccatcctacc-cccaattttattctccaaaaacgcagagaaataacagttttag 27393962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 30104479 - 30104641
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||| | ||||||||||| |||| ||||| |||||||||| || | |||||||||||||||||||||||    
T  30104479 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttt 30104578  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| |||||||| |   || | |||||||||||||||||||||||||    
T  30104579 tgttgcatttttcgtcctacc-cccatttt-attatctaaaaacgcagagaaatgacagttttag 30104641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 341 - 457
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| |  |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  440 ttcatttttcgtcctacc 457  Q
    | ||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 345 - 490
Target Start/End: Complemental strand, 22425354 - 22425209
Alignment:
Q  345 taataacacttttgattctcgtgttttggcatactcacgaaactggtactgccttt-taaaacagaacaaaacggtccttcaattatcatttttgtttca 443  Q
    |||| ||||||||| | ||||||||| ||| |||||||||| |||||  |||| || ||||||||||||||||||| |||||||||||||||||||| ||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  444 tttttcgtcctacctcccattttcaagctccagaaacgcagagaaat 490  Q
    |||||||||||||| |||||||| |  ||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 22425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 17465038 - 17464876
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg--ccttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    ||||||||| ||| ||||| | ||||||||||||| ||| || ||||||||| |||  |||||||||| |||||||||||||||||||||||||||||||    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggt-ctgacccttttaaaatagaacaaaacggtccttcaattatcattttt 17464940  T
Q  438 gtttca-tttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| || ||||| |||||||| |||||||| |  ||||| ||| |||||||||||||||||||||    
T  17464939 gttgcatttttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 17464876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 333 - 466
Target Start/End: Complemental strand, 51474887 - 51474753
Alignment:
Q  333 ttttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatc 431  Q
    |||| ||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||  |||| |||||||||| |||||||  |||||| | |||||    
T  51474887 tttttttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatc 51474788  T
Q  432 atttttgtttcatttttcgtcctacctcccatttt 466  Q
    ||||||||| |||||||||||||||| || |||||    
T  51474787 atttttgttgcatttttcgtcctacccccaatttt 51474753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 365 - 501
Target Start/End: Complemental strand, 26275087 - 26274952
Alignment:
Q  365 gtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccat 463  Q
    |||||||| | |||||||||||||||| || || ||||||||||||| |||||||||| |||||||||||||||||| | |||||||||||||| |||||    
T  26275087 gtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc-tttttcgtcctaccccccat 26274989  T
Q  464 tttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |  ||||| || ||||||||||||||||||||||    
T  26274988 ttt-attctccaaaaccgcagagaaatgacagttttag 26274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 335 - 466
Target Start/End: Complemental strand, 25612528 - 25612396
Alignment:
Q  335 ttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcat 433  Q
    ||||| || ||||| ||||||||| | ||||||||||| | ||||||||||| |||| ||||| |||||||| |||||||||| ||| || |||||||||    
T  25612528 ttattgggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcat 25612429  T
Q  434 ttttgtttcatttttcgtcctacctcccatttt 466  Q
    ||||||| |||||||||||||||| ||||||||    
T  25612428 ttttgttgcatttttcgtcctaccccccatttt 25612396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 341 - 466
Target Start/End: Complemental strand, 50116954 - 50116828
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||||| ||||||||||| | ||||||||||| ||||  |||| |||| ||| |||||||||||||| |||| |||||||||||||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  440 ttcatttttcgtcctacctcccatttt 466  Q
    | || ||||||||||||| ||||||||    
T  50116854 tgcaattttcgtcctaccccccatttt 50116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 341 - 466
Target Start/End: Complemental strand, 23228552 - 23228427
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | | ||||||||||| ||||||||||| || |  |||| ||||||||| ||||||||  |||||||||||||||||||| |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  440 ttcatttttcgtcctacctcccatttt 466  Q
    | |||||||||||||||||||||||||    
T  23228453 tgcatttttcgtcctacctcccatttt 23228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 34548243 - 34548184
Alignment:
Q  243 ggcatgactggactcatgttttaattataaaatatgtcatccaaagtggtataagggtgt 302  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34548243 ggcatgactgaactcatgttttaattataaaatatgtcatccaaagtggtataagggtgt 34548184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 339 - 467
Target Start/End: Original strand, 45965936 - 45966065
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||  |  | |||| ||||||||||| |||||||  ||||||| |||||||||| |    
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  438 gtttcatttttcgtcctacctcccattttc 467  Q
    ||| |||||||||| ||| | |||||||||    
T  45966036 gttgcatttttcgttctaacccccattttc 45966065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 32697224 - 32697120
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggt-actgccttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    |||||||||| || ||||||||||| | || ||  ||||||||||||||||||||  || |||||||||||||||||||| |||||||||||||||| ||    
T  32697224 ctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttgcatttttcgtcctacc-cc 32697126  T
Q  461 catttt 466  Q
    ||||||    
T  32697125 catttt 32697120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 342 - 454
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||| | ||||||||||||  || |||||||| |||| ||||| ||||||||||||||||||  |||||||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  441 tcatttttcgtcct 454  Q
     || |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 466
Target Start/End: Complemental strand, 25420684 - 25420560
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggt-actgccttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| |||||||||||  |||| ||||| | ||||||||||| || | ||  |||||||||| |||| ||||  ||||||||||||| |||||||||     
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  442 catttttcgtcctacctcccatttt 466  Q
    ||||||||||| |||| ||||||||    
T  25420584 catttttcgtcataccccccatttt 25420560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 466
Target Start/End: Original strand, 37220555 - 37220683
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||| ||||||| ||||||| | |  | |  ||| |||||||||||||| ||||  |||||||| |||||||||||    
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  438 gtttcatttttcgtcctacctcccatttt 466  Q
    ||| || |||||||||||||  |||||||    
T  37220655 gttgcacttttcgtcctaccctccatttt 37220683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 426
Target Start/End: Complemental strand, 37222118 - 37222030
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaa 426  Q
    |||||||||| ||||||||| | ||||||||||| | ||||||| ||| |||| ||||| |||||||||||||||||||  ||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 55192222 - 55192277
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaa-ctccagaaacgcagagaaatgacagttttag 55192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 454
Target Start/End: Complemental strand, 18010255 - 18010176
Alignment:
Q  376 tactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcct 454  Q
    ||||||||||| |||| | ||| ||||||||||||||||||  ||  ||||||||||||||||||| |||||||||||||    
T  18010255 tactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcct 18010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 518
Target Start/End: Original strand, 8873795 - 8873867
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||| ||||||| |||||||| || ||||||||||||||||||||||||||||||  |||| ||||||||    
T  8873795 ttttagtcttacctcctattttcaa-cttcagaaacgcagagaaatgacagttttaggcaattttggacctacc 8873867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 518
Target Start/End: Original strand, 50900637 - 50900709
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||| | |||||||| ||| ||||||  ||||||||||||||||||||| ||||||||||||||    
T  50900637 ttttagtcctaccttctattttcaa-ctctagaaacatagagaaatgacagttttaggcagttttagacctacc 50900709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 428 - 516
Target Start/End: Original strand, 2323466 - 2323553
Alignment:
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagaccta 516  Q
    |||||| ||| || || |||| ||||||||||| |||||||| |||||||||| | || |||||||||||||||||  |||||||||||    
T  2323466 tatcatgttttttgcaattttagtcctacctcctattttcaa-ctccagaaacacggataaatgacagttttaggcaattttagaccta 2323553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 437
Target Start/End: Original strand, 25419166 - 25419242
Alignment:
Q  363 tcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtcc-ttcaattatcattttt 437  Q
    ||||||||| || ||||||||||| | || ||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  25419166 tcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttt 25419242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 428 - 501
Target Start/End: Complemental strand, 27200150 - 27200078
Alignment:
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| ||| || || |||| ||| ||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  27200150 tatcatgttttttgcagttttagtcatacctcctattttcaa-ctccagaaacgcagagaaatgacaggtttag 27200078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 37075793 - 37075848
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||  |||||||| ||||||||||||||||||||||| |||||||    
T  37075793 ttttagtcctacctcttattttcaa-ctccagaaacgcagagaaatgaccgttttag 37075848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 501
Target Start/End: Complemental strand, 32730825 - 32730775
Alignment:
Q  451 tcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||| |||||  |||||| ||||||||||||| |||||||||||||||||    
T  32730825 tcctatctccctatttcaaactccagaaacgcacagaaatgacagttttag 32730775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 513
Target Start/End: Complemental strand, 37076133 - 37076048
Alignment:
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagac 513  Q
    |||||| ||| || ||||||| ||| ||||| | |||||  | ||| ||||||| ||||||||| ||||||||||| |||||||||    
T  37076133 tatcatgttttttacatttttagtcttaccttctattttttaactctagaaacgtagagaaatggcagttttaggcagttttagac 37076048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 50662854 - 50662798
Alignment:
Q  445 ttttcgtcctacctccc-attttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| ||||| |||||||| ||||||||||||| |||||||||||||||||    
T  50662854 ttttagtcctagctccctattttcaa-ctccagaaacgcacagaaatgacagttttag 50662798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 40839094 - 40839038
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  40839094 ttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 40839038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 47431801 - 47431857
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  47431801 ttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 47431857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 49407900 - 49407955
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||| ||||||| |||||||| ||||| |||||||||||||||||| ||||||    
T  49407900 ttttagtcatacctcctattttcaa-ctccaaaaacgcagagaaatgacaattttag 49407955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 501
Target Start/End: Original strand, 51828058 - 51828117
Alignment:
Q  442 catttttcgtcctacctccc-attttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||| |||||| ||||| |||||||| ||||||||||||| | |||||||||||||||    
T  51828058 catttttagtcctatctccctattttcaa-ctccagaaacgcacataaatgacagttttag 51828117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 51828399 - 51828343
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  51828399 ttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttag 51828343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 55389709 - 55389765
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  55389709 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 55389765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 55390039 - 55389983
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||||  |||| | ||||| ||||||| |||||||||||||||||    
T  55390039 ttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttag 55389983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 2e-69; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 338 - 514
Target Start/End: Complemental strand, 11445535 - 11445358
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  11445535 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 11445436  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacc 514  Q
    |||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  11445435 tgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacc 11445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 22219901 - 22219720
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  22219901 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 22219802  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| |||||||||| |||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  22219801 tgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttaggcggttttagacctacc 22219720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 338 - 512
Target Start/End: Original strand, 12935154 - 12935329
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttaga 512  Q
    |||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttaga 12935329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 336 - 518
Target Start/End: Original strand, 2319667 - 2319849
Alignment:
Q  336 tattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatt 434  Q
    ||||||||||||| ||| ||||| | ||||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  2319667 tattaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatt 2319766  T
Q  435 tttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||| |||||||||||||||| |||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  2319767 tttgttgcatttttcgtcctaccccccatttt-attctccagaaacgcagagaaatgatagttttaggcggttttagacctacc 2319849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 344 - 518
Target Start/End: Original strand, 18504922 - 18505097
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||||||||||| |||||||| ||| ||||| | |||||||||||||||||||||| |||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttaggcgattttagacctacc 18505097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 340 - 518
Target Start/End: Original strand, 31470314 - 31470493
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||  ||| |||||||||||||||||||| ||| ||||||||| |||||||    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcgattttagacctacc 31470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 340 - 518
Target Start/End: Complemental strand, 20741650 - 20741468
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||| ||| | ||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||     
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  439 ttt---catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||   ||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacc 20741468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 23075675 - 23075495
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| |||||||||| |||||||| ||||| || ||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttaggcagttttagacctacc 23075495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 344 - 501
Target Start/End: Original strand, 10899942 - 10900100
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| |  |||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 10900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 18257135 - 18257297
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| ||||||||||| |||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  18257235 gttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 18257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 341 - 518
Target Start/End: Complemental strand, 18257682 - 18257504
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| | ||||||| | ||||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||||  |||||| | ||||| | ||| ||||||||||||||||||||||||||||||||||||    
T  18257582 tacatttttcgtcctacctcatattttccaactccatacacgtagagaaatgacagttttaggcggttttagacctacc 18257504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 342 - 518
Target Start/End: Original strand, 15827639 - 15827817
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaa--acggtccttcaattatcatttttg 438  Q
    ||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||  |||||||||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||||||||||| |||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca-ttttaggcggttttagacttacc 15827817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 12935704 - 12935542
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgccttt-taaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||| ||||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccatttt-attctccataaacacagagaaatgacagttttag 12935542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 20741098 - 20741260
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||    
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 20741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 10900475 - 10900315
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||| ||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 10900315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 11277127 - 11276967
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccatttt-attctccaaaaacgaagagaaatgacagttttag 11276967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 342 - 501
Target Start/End: Complemental strand, 31470860 - 31470701
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||| | || ||||||| || |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  441 tcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
     |||||||||||||||| |||||||| |  ||||| |||||||||||||||||| ||||||    
T  31470760 gcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacaattttag 31470701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 15828187 - 15828026
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| ||||||||||||||||  | || |||||||||| ||||||||||||||||||||||||||||||    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| |||||||||||||| ||||||||||    
T  15828087 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 15828026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 364 - 503
Target Start/End: Original strand, 11276613 - 11276753
Alignment:
Q  364 cgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctccca 462  Q
    ||||||||||  |||||| ||||||| | || || |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |    
T  11276613 cgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgtttcatttttcgtcctacctccta 11276712  T
Q  463 ttttcaagctccagaaacgcagagaaatgacagttttaggc 503  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  11276713 ttttcaaactccaaaaacgcagagaaatgacagttttaggc 11276753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 28472634 - 28472796
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | |||||||||||||  |||||||||| |||| ||||| |||||||||||||||||| |||| |||||||||||||||    
T  28472634 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 28472733  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  28472734 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 28472796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 29859823 - 29859985
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | |||||||||||||  |||||||||| |||| ||||| |||||||||||||||||| |||| |||||||||||||||    
T  29859823 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 29859922  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  29859923 tgttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 29859985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 341 - 518
Target Start/End: Complemental strand, 4811801 - 4811624
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| | ||||||||| ||||||||||||| |||||| ||||||| |  ||| |||| ||||||||||||||||||||||||||||||||||||||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | |||||||| || ||||||| |||||||| | ||| ||||||||| ||||| || |||||||  ||||||||||||||    
T  4811701 tgcatttttcatcatacctcctattttcaaaccccataaacgcaga-aaatggcaattttaggtagttttagacctacc 4811624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 11444984 - 11445147
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||| ||||| |||||  |||||||||||| |||| ||||||||||||||||||||    
T  11444984 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttt 11445083  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||||||||  ||||||| |  ||| | |||| ||||||||||||||||||||    
T  11445084 tgttgcatttttcgtcctaccctccatttt-attctctaaaaacacagagaaatgacagttttag 11445147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 1149977 - 1149816
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | |||||||||| || |||||| |||||||||  |||| |||||||| ||||||||||||||||||||||| |||||||||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  440 ttcatttttcgtcctacctcccattttcaagctcc-agaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||| |||||||| |  |||| | |||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatgacagttttag 1149816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 342 - 500
Target Start/End: Complemental strand, 18505463 - 18505305
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| | ||||||| | ||||||||||||  |||||||||||||| | ||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  441 tcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtttta 500  Q
     |||||||||||||||| |||||||| |  |||||  |||| ||||||||||||||||||    
T  18505363 gcatttttcgtcctaccccccatttt-attctccaacaacgaagagaaatgacagtttta 18505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 344 - 501
Target Start/End: Complemental strand, 2322760 - 2322604
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| |  |||||||||||  ||||||||||||| ||  |||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||||| | |||||| |  ||||| |||| ||||||||||||||||||||    
T  2322660 atttttcgtcctacccctcatttt-attctcca-aaacacagagaaatgacagttttag 2322604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 437
Target Start/End: Original strand, 23073998 - 23074096
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcattttt 23074096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 341 - 501
Target Start/End: Original strand, 4811372 - 4811532
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | |  || ||||||  ||||||||||||||||  |||| |||||||| |||| ||||||||||||||||||||||||||||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||| |||| |||||||| |  || || ||||||||| |||| ||||||||||    
T  4811472 ttcatttttcgtcttaccccccatttt-attcttcaaaaacgcagataaataacagttttag 4811532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 339 - 428
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaatt 428  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 466
Target Start/End: Original strand, 29033436 - 29033560
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | ||||| ||||||| | ||||||||| |||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||     
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  442 catttttcgtcctacctcccatttt 466  Q
    ||  |||| ||||||| ||||||||    
T  29033536 cacatttcatcctaccccccatttt 29033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 344 - 466
Target Start/End: Complemental strand, 3835268 - 3835145
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | |  |||||||| | ||||||||||| |||| |||||| |||||||||||||||||  |||||| |||||||||||||||  |    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  443 atttttcgtcctacctcccatttt 466  Q
    ||||||||||||||| ||||||||    
T  3835168 atttttcgtcctaccccccatttt 3835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 466
Target Start/End: Original strand, 18296137 - 18296270
Alignment:
Q  333 ttttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatc 431  Q
    |||| ||||||||||| | | ||||  | ||||||||||| | ||||||| ||| || || |||| ||||||||||||||||||| |||||||| |||||    
T  18296137 tttttttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatc 18296236  T
Q  432 atttttgtttcatttttcgtcctacctcccatttt 466  Q
    ||||||||| |||||||||||||||| ||||||||    
T  18296237 atttttgttgcatttttcgtcctacc-cccatttt 18296270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 466
Target Start/End: Complemental strand, 29035180 - 29035056
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||  | |||||||||| || ||||||||||| ||||  |||| ||||||||||||||||||  |||||| | ||||||||||||||     
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  442 catttttcgtcctacctcccatttt 466  Q
    |||||||||||| |||  |||||||    
T  29035080 catttttcgtcccaccctccatttt 29035056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 503
Target Start/End: Complemental strand, 35163627 - 35163570
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggc 503  Q
    |||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||    
T  35163627 ttttagtcctacctcctattttcaa-ctccaaaaacacagagaaatgacagttttaggc 35163570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 453 - 518
Target Start/End: Original strand, 32836114 - 32836178
Alignment:
Q  453 ctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||| |||||||| |||| ||||| |||||||||||||||||||| |  |||||||||||||    
T  32836114 ctacctcctattttcaa-ctcctgaaacacagagaaatgacagttttagacaattttagacctacc 32836178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 441 - 501
Target Start/End: Original strand, 23074089 - 23074148
Alignment:
Q  441 tcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||||||| |||||||| |  ||||| |||||||||||||| ||||||||||    
T  23074089 tcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 23074148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 25472454 - 25472398
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| ||||||||||||||| |||||||||||||||||    
T  25472454 ttttagtcctatctccctatttccagctccagaaacgcacagaaatgacagttttag 25472398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 518
Target Start/End: Original strand, 1149559 - 1149606
Alignment:
Q  471 ctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||| |||||||||  |||||||||||| |||||||||||||    
T  1149559 ctccagaaacacagagaaatagcagttttaggcgattttagacctacc 1149606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 482 - 518
Target Start/End: Complemental strand, 28473041 - 28473005
Alignment:
Q  482 cagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| |||||||||||||||| |||||||||||||||    
T  28473041 cagaaaaatgacagttttagggggttttagacctacc 28473005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 31073584 - 31073528
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  31073584 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 31073528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 31573829 - 31573885
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  31573829 ttttagtcctatctccctatttccaactccagaaacgcatagaaatgacagttttag 31573885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 6e-69; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 338 - 517
Target Start/End: Complemental strand, 7446894 - 7446714
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||| ||||||| ||||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  7446894 ttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 7446795  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctac 517  Q
    |||| ||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  7446794 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcggttttagacctac 7446714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 43058880 - 43058700
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||    
T  43058880 ttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcatttt 43058781  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43058780 -gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacc 43058700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 340 - 518
Target Start/End: Original strand, 18450829 - 18451008
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||     
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 18451008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 339 - 515
Target Start/End: Complemental strand, 22374872 - 22374695
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacct 515  Q
    ||| ||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttaggcggttttagacct 22374695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 40815347 - 40815523
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| |||||||||| ||||||||||| ||||||||||||||||||||     
T  40815347 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttg 40815446  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40815447 catttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 40815523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 340 - 518
Target Start/End: Complemental strand, 28617160 - 28616981
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||| ||||||| |||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattttagacctacc 28616981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 11091067 - 11090887
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||    
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||  ||||||||||||| |||| |||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttaggcggttttagacctacc 11090887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 26538627 - 26538463
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctt-ttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||    
T  26538627 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttt 26538528  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||    
T  26538527 tgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttag 26538463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 344 - 518
Target Start/End: Complemental strand, 40027682 - 40027507
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| |    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||||||||||| |||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttaggcggttttagacctacc 40027507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 335 - 501
Target Start/End: Original strand, 239347 - 239512
Alignment:
Q  335 ttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgccttttaaaacagaacaaaacggtccttcaattatcatt 434  Q
    |||||||||||||| ||||||||| |  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  239347 ttattaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccttttaaaacagaacaaaacggtccttcaattatcatt 239446  T
Q  435 tttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  239447 tttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 239512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 350 - 516
Target Start/End: Complemental strand, 239888 - 239721
Alignment:
Q  350 acacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcattttt 448  Q
    ||||||||| | ||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||    
T  239888 acacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgttttt 239789  T
Q  449 cgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagaccta 516  Q
    |||| ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  239788 cgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagaccta 239721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 329 - 518
Target Start/End: Complemental strand, 3026018 - 3025830
Alignment:
Q  329 ataattttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaat 427  Q
    |||||||| || |||||||| ||| ||||| | ||||||||||||| ||||||||||| |||| ||||| |||||||||| |||||||||||||||||||    
T  3026018 ataattttttttggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaat 3025921  T
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||||| ||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||    
T  3025920 tattatttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcgggtttagacctacc 3025830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 1978656 - 1978476
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | || |||||||||| ||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||| ||||||||||| |||||||| ||| |||||| || ||||||| |||||||| |||||||||||||||||    
T  1978556 gttgcattttttgtcctacctcctattttcaaactctagaaacacaaagaaatggcagttttatgcggttttagacctacc 1978476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 333 - 518
Target Start/End: Original strand, 8425347 - 8425532
Alignment:
Q  333 ttttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatc 431  Q
    |||||||||  ||||| ||||||||| | || |||||||||| ||||||||||| ||||  | |||||| ||||||||||||||||||| ||||||||||    
T  8425347 ttttattagatttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatc 8425445  T
Q  432 atttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| |||| ||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  8425446 atttgtgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttaagcggttttagacctacc 8425532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 334 - 501
Target Start/End: Original strand, 11090514 - 11090681
Alignment:
Q  334 tttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatca 432  Q
    |||| |||| ||||| ||||||||| | ||||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  11090514 tttaataggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatca 11090613  T
Q  433 tttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  11090614 tttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 11090681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 40815893 - 40815730
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||| ||||| ||||||||| | ||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  40815893 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttt 40815794  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  40815793 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 40815730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 22374318 - 22374480
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| ||||||| |||||||| ||||||||    
T  22374418 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgatagttttag 22374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 26538096 - 26538257
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| |||| ||||||||| ||||||||||    
T  26538196 ttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaataacagttttag 26538257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 14432689 - 14432508
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    |||| |||||| ||| ||||| | ||||||||||||| |||||| |||||||||  |||| ||||||||||||| |||| ||| |||||||||| |||||    
T  14432689 ttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttt 14432590  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| |||||||| |||||||||| |||||||| ||| ||||||||||||||||||||||||||||||  ||||||||||||    
T  14432589 tgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcgaatttagacctacc 14432508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 501
Target Start/End: Original strand, 43058333 - 43058493
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||||| |||||||||||||  |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||| ||||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 43058493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 40027139 - 40027300
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| |  |||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || ||||||| ||||||||  ||||||| |  ||||| |||||||||||||||||||||||||    
T  40027239 ttgcattttttgtcctaccctccatttt-attctccaaaaacgcagagaaatgacagttttag 40027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 18451379 - 18451216
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||  ||||||||| |||||||||    
T  18451379 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttt 18451280  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||| ||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  18451279 tgttgcatttttcttcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 18451216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 1978106 - 1978268
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||| ||||| | || |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| ||||||| |||||  | |||||||| |  ||||| |||||||||||||||||||||||||    
T  1978206 gttgcattttttgtcctgtcccccatttt-attctccaaaaacgcagagaaatgacagttttag 1978268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 341 - 466
Target Start/End: Original strand, 28616613 - 28616739
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  440 ttcatttttcgtcctacctcccatttt 466  Q
    | || ||||||||||||| ||||||||    
T  28616713 tgcaattttcgtcctaccccccatttt 28616739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 337 - 501
Target Start/End: Original strand, 3025462 - 3025625
Alignment:
Q  337 attaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattt 435  Q
    |||||| || || ||| ||||| | ||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||    
T  3025462 attaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcattt 3025561  T
Q  436 ttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||| |||||||||||||||| |||||||| |  ||| | ||||||| |||||||||||||||||    
T  3025562 ttgttgcatttttcgtcctacc-cccatttt-attctcaaaaaacgcaaagaaatgacagttttag 3025625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 340 - 466
Target Start/End: Original strand, 20444748 - 20444875
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | |||||||||||||  ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  439 tttcatttttcgtcctacctcccatttt 466  Q
    || || ||||||||||||| ||||||||    
T  20444848 ttgcagttttcgtcctaccccccatttt 20444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 340 - 497
Target Start/End: Original strand, 7446341 - 7446497
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||||| ||||||||||||  |||||| |||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||     
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtt 497  Q
    || ||||||||||| |||| |||||||| |  ||||| |||||||||||||||||||||    
T  7446441 ttgcatttttcgtcatacc-cccatttt-attctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 344 - 501
Target Start/End: Complemental strand, 8425902 - 8425745
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| |||| |||||||||  ||||||||||| |||| ||||| |||||||| |||||||||| ||||||||||||||||||||||| |    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||| |||| |||| ||| |  ||||| |||||||||||||||||||||||||    
T  8425802 atttttcgtcttacc-cccaattttattctccaaaaacgcagagaaatgacagttttag 8425745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 344 - 501
Target Start/End: Original strand, 14432145 - 14432302
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||| |||||| |||||||||  |||| |||||||| | |||||||||||||||||| ||||||||||||| |    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| |||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 14432302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 458
Target Start/End: Complemental strand, 28847242 - 28847122
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||| ||||| | ||||||||||||  |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||    
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  438 gtttcatttttcgtcctacct 458  Q
    ||| |||||||||||||||||    
T  28847142 gttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 341 - 466
Target Start/End: Original strand, 35779708 - 35779834
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  440 ttcatttttcgtcctacctcccatttt 466  Q
    | ||||||| |||||||| ||||||||    
T  35779808 tgcattttttgtcctaccccccatttt 35779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 342 - 466
Target Start/End: Complemental strand, 35781207 - 35781082
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||| ||||  |||| |||||||||||||||||||  ||||||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  441 tcatttttcgtcctacctcccatttt 466  Q
     |||||||||||||| | ||||||||    
T  35781107 gcatttttcgtcctaacccccatttt 35781082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 338 - 465
Target Start/End: Complemental strand, 20440579 - 20440451
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | |||||||||||||  ||||||||||||||| ||||| ||||||||||||||||||||||| |||| ||||||||||    
T  20440579 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttt 20440480  T
Q  437 tgtttcatttttcgtcctacctcccattt 465  Q
    |||| || ||||||||||| | |||||||    
T  20440479 tgttgcagttttcgtcctatcccccattt 20440451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 343 - 466
Target Start/End: Original strand, 8972239 - 8972363
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | ||||||||||||||| ||||||||| ||||  |||| ||| ||||||||||||||  ||| |||||||||||||||||||     
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  442 catttttcgtcctacctcccatttt 466  Q
    |||||||||| ||||| || |||||    
T  8972339 catttttcgttctaccccctatttt 8972363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 466
Target Start/End: Original strand, 15551501 - 15551625
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | ||||||||||||  ||||||||||| ||||  |||||||| |||||| |||||||  |||||||| ||||||||||||||     
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  442 catttttcgtcctacctcccatttt 466  Q
    |||||||||||| |||  |||||||    
T  15551601 catttttcgtccaaccctccatttt 15551625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 366 - 466
Target Start/End: Complemental strand, 15552573 - 15552473
Alignment:
Q  366 tgttttggcatactcacgaaactggtactgccttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccattt 465  Q
    ||||||||| ||||||||||| || | |  ||||||||||||||||||||  ||| |||||||||||||||||||  |||||||||||||||  ||||||    
T  15552573 tgttttggcctactcacgaaaatgatccgcccttttaaaacagaacaaaattgtcattcaattatcatttttgttgtatttttcgtcctaccctccattt 15552474  T
Q  466 t 466  Q
    |    
T  15552473 t 15552473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 331 - 501
Target Start/End: Complemental strand, 28143585 - 28143416
Alignment:
Q  331 aattttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaatta 429  Q
    ||||||||||||||||||  |||||||| | ||||  ||||| |   ||||||||| |||| |||||| ||| |||  ||||||||  |||| | || ||    
T  28143585 aattttattaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaacta 28143486  T
Q  430 tcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||| || || |||| ||||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  28143485 tcatgttt-ttgcagttttagtcctacgtcctattttcaa-ctccagaaacgcagagaaatgacagttttag 28143416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 499
Target Start/End: Complemental strand, 31797219 - 31797166
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtttt 499  Q
    |||| ||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  31797219 ttttagtcctacctcctattttcaa-ctctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 33920716 - 33920772
Alignment:
Q  445 ttttcgtcctacctccc-attttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| ||||| |||||||| ||||||||||||| |||||||||||||||||    
T  33920716 ttttagtcctatctccctattttcaa-ctccagaaacgcatagaaatgacagttttag 33920772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 501
Target Start/End: Original strand, 44219712 - 44219804
Alignment:
Q  408 gaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||  |||||| |||||| || ||| || || |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  44219712 gaacaaaattgtccttaaattat-atgttttttgcagttttagtcctatctccctgtttccaactccagaaacgcacagaaatgacagttttag 44219804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 5560992 - 5560936
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  5560992 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 5560936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 13399526 - 13399582
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  13399526 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 13399582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 340 - 518
Target Start/End: Complemental strand, 13225185 - 13225006
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttaggcggttttagacctacc 13225006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 336 - 518
Target Start/End: Original strand, 19176285 - 19176468
Alignment:
Q  336 tattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatt 434  Q
    ||||||||||||| ||||||||| | ||||||||||||| ||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||    
T  19176285 tattaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt 19176384  T
Q  435 tttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  19176385 tttgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacc 19176468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 344 - 518
Target Start/End: Original strand, 9928912 - 9929087
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | |||||||||||   |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttaggcggttttagacctacc 9929087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 341 - 518
Target Start/End: Complemental strand, 41681679 - 41681501
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| || ||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||| | |||||||| |||||||||||||||||||||  |||||||||||||||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttaggcggttttagacctacc 41681501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 328 - 515
Target Start/End: Original strand, 44831236 - 44831422
Alignment:
Q  328 cataattttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaa 426  Q
    ||||||||||  ||||||||| ||||||||| | ||| ||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||| |    
T  44831236 cataatttta--aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcca 44831333  T
Q  427 ttatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacct 515  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  44831334 ttatcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttaggcggttttagacct 44831422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 340 - 518
Target Start/End: Complemental strand, 11657003 - 11656824
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||||||    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||||||||||| |||||||| ||||||||||||||||||||  |||||||||||| || ||||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttaggcgattgtagacctacc 11656824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 344 - 518
Target Start/End: Complemental strand, 12572393 - 12572218
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||  ||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttaggcggttttagatctacc 12572218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 342 - 516
Target Start/End: Complemental strand, 31133764 - 31133589
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||| | ||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  441 tcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagaccta 516  Q
     ||||||||||| ||||||| |||||||| ||||||||| ||||||||||||| |||||| |||||||||||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggttttatgcggttttagaccta 31133589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 33328683 - 33328507
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| | ||||||| | |||||||||| || ||||||||||||| ||  ||| ||||||||||| ||||||||||||||||||||||||||||||||     
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttaggcggttttaaacctacc 33328507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 338 - 518
Target Start/End: Original strand, 33742919 - 33743099
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||| | ||||||||||||||||  |||| ||||||||||||||||| ||||| |||||||||||||||    
T  33742919 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaacaaa-cggtctttcaattatcatttt 33743017  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || | ||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||    
T  33743018 tgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttaggcagttttagacctacc 33743099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 338 - 499
Target Start/End: Complemental strand, 34541096 - 34540934
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||    
T  34541096 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttt 34540997  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtttt 499  Q
    |||| ||||||||||||||||||| |||||||| ||  |||||||||||||||||| ||||||    
T  34540996 tgttgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 339 - 500
Target Start/End: Original strand, 41681132 - 41681292
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtttta 500  Q
    ||| |||||||||||||||| |||||||| |  ||||| ||||||||||||||||||||||||    
T  41681232 gttgcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 337 - 501
Target Start/End: Complemental strand, 44831794 - 44831630
Alignment:
Q  337 attaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattt 435  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||  ||||||||||||||    
T  44831794 attaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcattt 44831695  T
Q  436 ttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||| ||||||| |||||||| |||||||| |  ||||| |||| ||||||||||||||||||||    
T  44831694 ttgttgcatttttggtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 44831630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 19176838 - 19176675
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  19176838 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176739  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| |||||||| |  ||||| ||||||||| |||||||||||||||    
T  19176738 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagacaaatgacagttttag 19176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 339 - 495
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    ||||||||||  ||||||| ||||||||||||||||||| ||||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||    
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacag 495  Q
     || ||||||||||| ||||||| |||||||| ||||||||||||| |||||||||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 12571860 - 12572024
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||    
T  12571860 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttt 12571959  T
Q  437 tgtttcatttttcgtcct-acctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||||| ||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  12571960 tgttgcatttttcgtcctaaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 12572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 11656452 - 11656616
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| ||||||||| |||||||||||||||||||||| ||||||    
T  11656452 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttt 11656551  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctcc-agaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| |||||||| |  |||| | ||||||||||||||| |||||||||    
T  11656552 tgttgcatttttcgtcctaccccccatttt-attctccaaaaaacgcagagaaatggcagttttag 11656616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 31133218 - 31133380
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||| | |||||||||||||||| | ||| |||||||||| |||||||| ||||||||| ||||||||||    
T  31133218 taggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcattttt 31133317  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  31133318 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 31133380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 9930203 - 9930042
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||| ||||||| |||||||||||||||| ||||| |||||||| ||||||||| |||||||||| |||||||||||    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| || ||||||||||||| ||||||||    
T  9930103 ttgcatttttcgtcctaccccccatttt-attctccaaaagcgcagagaaatgatagttttag 9930042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 345 - 501
Target Start/End: Original strand, 13224645 - 13224800
Alignment:
Q  345 taataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttca 443  Q
    |||| ||||||||| |  |||||||||||| |||||||||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||  |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggt-ctgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  444 tttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 13224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 344 - 501
Target Start/End: Original strand, 33328161 - 33328318
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||| |||||||||||||| |  |||| ||||||||||||||||||||||||||||| ||||||||||||| |    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||  | ||||| |  ||||| ||||||| |||||||||||||||||    
T  33328261 atttttcgtcctaccctcgatttt-attctccaaaaacgcaaagaaatgacagttttag 33328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 9178180 - 9178021
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctt-ttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||||||||||| |  |||| | ||||||||||||||||||||||||||| ||||||||||||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||| || |||| |||||||| |  ||| | |||||||||||||||||| ||||||    
T  9178080 tgcatttttcatcttacc-cccatttt-attctcaaaaaacgcagagaaatgacaattttag 9178021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 432 - 518
Target Start/End: Original strand, 9177724 - 9177810
Alignment:
Q  432 atttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||| |||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttaggcggttttagacctacc 9177810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 398 - 501
Target Start/End: Complemental strand, 33743406 - 33743304
Alignment:
Q  398 ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtt 497  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||||| |  ||||| |||||||||||||| ||||||    
T  33743406 ttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagtt 33743308  T
Q  498 ttag 501  Q
    ||||    
T  33743307 ttag 33743304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 339 - 448
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| |  |||||||||||| ||||||||||| |||| | ||| ||||||||||||| ||||||||| ||||||||||||||||    
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  438 gtttcattttt 448  Q
    ||| |||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 344 - 501
Target Start/End: Complemental strand, 4630328 - 4630177
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| |||||||||||  |||||||||||  ||||||||||| |||| ||||  ||||||||||||| | ||||||||||||||||      ||||| |    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaatta------ttgttgc 4630235  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||| ||||||| |||||||| |  ||||| ||||||||| |||||||||||||||    
T  4630234 atttttcatcctaccccccatttt-attctccaaaaacgcagaaaaatgacagttttag 4630177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 466
Target Start/End: Original strand, 10918147 - 10918252
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggtactgcctt-ttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    |||||||||||   ||||||||||| ||||  |||||  |||||||||| |||||  ||||||||| ||||||||||||| |||||||| || |||| ||    
T  10918147 ctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgcatttttcatcataccccc 10918246  T
Q  461 catttt 466  Q
    ||||||    
T  10918247 catttt 10918252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 457
Target Start/End: Original strand, 43958264 - 43958302
Alignment:
Q  419 tccttcaattatcatttttgtttcatttttcgtcctacc 457  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctacc 43958302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 8074085 - 8074000
Alignment:
Q  352 acttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||| | ||||||||||||| || |||||||| || |  || ||||||||||||||||||||   ||||||||||||||||||    
T  8074085 acttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatcatttt 8074000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 18805267 - 18805322
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||| || ||||| |||||||||| ||||||||||||||||||||    
T  18805267 ttttagtcctacctcctatcttcaa-ctccagaaacacagagaaatgacagttttag 18805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 501
Target Start/End: Complemental strand, 35427363 - 35427198
Alignment:
Q  336 tattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcatt 434  Q
    ||||||||||||| ||||||||| | ||||  ||||| |  |||||||||| |||| || ||| ||| |||| ||||||||  |||| | |||||| ||     
T  35427363 tattaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-ata 35427265  T
Q  435 tttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| || || |||| |||| | |||||  |||| | ||||| ||||||| |||||||||||||||||    
T  35427264 ttttttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttag 35427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 28254868 - 28254812
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  28254868 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28254812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 2e-68; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 15173640 - 15173461
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgccttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    |||||||||| ||||||||| | ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgccttttaaaacagaacaaaatggtccttcaattatcatttttg 15173541  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  15173540 ttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttaggcggttttagacctacc 15173461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 50970276 - 50970456
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttttggcggttttagacctacc 50970456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 341 - 518
Target Start/End: Complemental strand, 29870164 - 29869986
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttaggcggttttagacctacc 29869986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 340 - 518
Target Start/End: Complemental strand, 39154566 - 39154387
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || ||||||||||||||||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttaggcggttttagacctacc 39154387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 338 - 518
Target Start/End: Original strand, 21856039 - 21856220
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    |||| |||||| ||||||||| | |||||||||||   |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  21856039 ttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 21856138  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| |||||||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856139 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 21856220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 350 - 518
Target Start/End: Original strand, 33143926 - 33144095
Alignment:
Q  350 acacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcattttt 448  Q
    ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| || ||| |||    
T  33143926 acacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatattt 33144025  T
Q  449 cgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33144026 cgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttaggcggttttagacctacc 33144095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 17433758 - 17433582
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | |||||||| |||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||     
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||| ||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacggttttagacctacc 17433582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 333 - 518
Target Start/End: Original strand, 5539808 - 5539994
Alignment:
Q  333 ttttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatc 431  Q
    ||||| || ||||||| ||||||||| | ||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||    
T  5539808 ttttaatatgcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatc 5539907  T
Q  432 atttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||  |||||||||||||||||| |||||||| ||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  5539908 atttttgttgtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttaggcggttttagacctacc 5539994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 342 - 518
Target Start/End: Original strand, 8678542 - 8678719
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  441 tcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     ||||||||||||||||| | |||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttaggcggttttagacatacc 8678719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 340 - 515
Target Start/End: Complemental strand, 18984665 - 18984489
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | || |||||||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacct 515  Q
    || ||||||||||||||||||| |||||||| ||| |||||| |||||||||| |||||||||||||||||||||||    
T  18984565 ttgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttaggcggttttagacct 18984489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 342 - 518
Target Start/End: Complemental strand, 4636515 - 4636338
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||| | ||||||||||||| |||||||||||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  441 tcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     |||||||||||| |||||| |||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcgattttagacctacc 4636338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 29307487 - 29307326
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    ||||||||  |||||||| | ||||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 29307326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 15646190 - 15646370
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| | ||||||| | ||||||||||||| ||||||||||||||||  |||| |||||||||||||||||| ||| |||||||||||||||||    
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||||||||||||||  |||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttaggcggttttagacctacc 15646370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 341 - 513
Target Start/End: Original strand, 26859059 - 26859232
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | || |||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagac 513  Q
    | ||||||||||||||||||  |||||||| |||||||||||||||||| | | ||||||||||||||||||||    
T  26859159 tgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttaggcggttttagac 26859232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 341 - 501
Target Start/End: Original strand, 29306953 - 29307113
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 29307113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 9019511 - 9019347
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||| | ||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  9019511 ttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttt 9019412  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||||||||||| |||||||| | |||||||||||||||||| ||||||||||    
T  9019411 tgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttag 9019347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 5540364 - 5540203
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5540203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 50970824 - 50970663
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  50970724 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 50970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 45883335 - 45883139
Alignment:
Q  8 agatggtgaaggaagagagagtgagcagcaataagagggagacgacggccatgacaagcatgtggaaggaggtcgaacaacggcgacgaaaacgaagaca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||| |||||    
T  45883335 agatggtgaaggaagagagagtgagcagcaataagagggagacgacggcgatgacaagcatgtggaaggaggtcgaacaacggcga-ggaaacggagaca 45883237  T
Q  108 ttggggaacgacgacggcggagatggcgaggagggccgagaacagtggtgtnnnnnnnnnnnncggatatgattttgtttagagatagaaaataaaatta 207  Q
     ||||||| | |||||||      |||||||||||||||||||| ||||||            | ||| |||||||||||||||||||||||||||||||    
T  45883236 ctggggaatggcgacggc------ggcgaggagggccgagaacaatggtgtgagagagagagacagatctgattttgtttagagatagaaaataaaatta 45883143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 18984117 - 18984279
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||| ||||||||    
T  18984217 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgatagttttag 18984279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 29869619 - 29869780
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||  |||||||| |  ||||| |||||||||||||||||||||||||    
T  29869719 ttgcatttttcgtcctacaccccatttt-attctccaaaaacgcagagaaatgacagttttag 29869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 15646741 - 15646580
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||| | || || |||||||||||||||||||||||||||||||||||||||||    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||| ||| |  ||||| |||||||||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacc-cccaattttattctccaaaaacgcagagaaatgacagttttag 15646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 518
Target Start/End: Original strand, 17112282 - 17112459
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    |||||||| ||||||||| ||||| |||||||   |||||| |||| |||||   |||||||||| |||| ||||  |||||||||||||||||||| ||    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtaggcccttttaaaatagaataaaatagtccttcaattatcatttttatt 17112381  T
Q  441 tcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     ||||||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  17112382 gcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttaggcggttttagacctacc 17112459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 343 - 501
Target Start/End: Complemental strand, 33144462 - 33144304
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| || ||||||| |||||||||||||     
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  33144362 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 33144304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 342 - 510
Target Start/End: Original strand, 5962579 - 5962748
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||| ||||| | |||||||| |||  || ||||||||||||| | ||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  441 tcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggtttta 510  Q
     |||||||||| |||||||| |||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttaggcggtttta 5962748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 334 - 501
Target Start/End: Original strand, 15173089 - 15173256
Alignment:
Q  334 tttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatca 432  Q
    ||||| ||| ||||| ||||||||| | ||||||||||||| ||||||||||||| || ||||| ||||||||  |||||||||||| ||||||||||||    
T  15173089 tttatcaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatca 15173188  T
Q  433 tttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  15173189 tttttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 15173256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 8679086 - 8678927
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||||| ||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | ||||||||||||||||| ||||||| |  ||||| ||| |||||||||||||||||||||    
T  8678986 tgcatttttcgtcctacct-ccatttt-attctccaaaaatgcagagaaatgacagttttag 8678927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 338 - 490
Target Start/End: Original strand, 9018970 - 9019122
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||    
T  9018970 ttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttt 9019069  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaat 490  Q
    |||| |||||||||||||||| |||||||| |  ||||| ||||||||||||||    
T  9019070 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaat 9019122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 21856588 - 21856428
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||| ||||||| | ||||||||| ||||||||||||||||||||||||| |||||||||||     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||  |||||||| |  ||||| |||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccatttt-attctccaaaaacgcagagaaatgacagttttag 21856428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 26859606 - 26859445
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||||| ||||||||||||  |||||||||||||  | ||||| |||||||||||||||| |||||||||||||||||||||||    
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||  |  ||||| |||||||||||||| | ||||||||    
T  26859506 gttgcatttttcgtcctaccccccattt--attctccaaaaacgcagagaaataatagttttag 26859445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 344 - 501
Target Start/End: Complemental strand, 5963120 - 5962963
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||| |||||||||||||| |  |||| |||||||| |||||||||| ||| ||||||||||||||||||| |    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  5963020 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 5962963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 343 - 501
Target Start/End: Original strand, 39154021 - 39154179
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| |  || |||||||||||||||||||||||| |  |||| ||||||||||||||||||||||||| |||||||||||||||||     
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||| |||||| | |  ||||| ||||||| |||||||||||||||||    
T  39154121 catttttcgtcctaccccccattct-attctccaaaaacgcatagaaatgacagttttag 39154179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 341 - 501
Target Start/End: Original strand, 17433216 - 17433376
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||| ||||||||| |||||| |||||||    |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||| ||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  17433316 tgcatttttcatcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 17433376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 340 - 466
Target Start/End: Original strand, 52268289 - 52268416
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||| ||||||| | ||||||||| |||| ||||| ||||||||||||||||||| ||| |||| ||||||||||||    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  439 tttcatttttcgtcctacctcccatttt 466  Q
    || || ||||||||||||| ||||||||    
T  52268389 ttgcacttttcgtcctaccccccatttt 52268416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 45883104 - 45883045
Alignment:
Q  243 ggcatgactggactcatgttttaattataaaatatgtcatccaaagtggtataagggtgt 302  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45883104 ggcatgactgaactcatgttttaattataaaatatgtcatccaaagtggtataagggtgt 45883045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 400 - 501
Target Start/End: Original strand, 4636033 - 4636132
Alignment:
Q  400 ttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtttt 499  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||||| || ||||| |||||||| |  || || |||||||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccatttt-attcttcaaaaacgcagagaaatgacagtttt 4636130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 456
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | ||||||||||| | |||||| ||||  ||| ||||| ||||||||||||||||||  ||| |||| ||||||||||||||     
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  442 catttttcgtcctac 456  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 426
Target Start/End: Complemental strand, 2733505 - 2733416
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaa 426  Q
    ||||||||||| | ||||||| | || |||||||||| || || ||||| |||| ||||| |||||||||||||||||||||||||||||    
T  2733505 ttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 341 - 440
Target Start/End: Complemental strand, 47827132 - 47827033
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    ||||||||| ||||||||||   | ||||||||| ||||||||||| ||||  |||| ||||||||||||||||||  |||||| |||||||||||||||    
T  47827132 ggcttaata-cacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgt 47827034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 490
Target Start/End: Complemental strand, 45048594 - 45048533
Alignment:
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaat 490  Q
    |||||| ||| || || |||| ||||||||||| |||||||| ||||||||||||||||||||    
T  45048594 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaaat 45048533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 8229744 - 8229800
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  8229744 ttttagtcctatctccctatttctaactccagaaacgcacagaaatgacagttttag 8229800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 17088255 - 17088310
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||| |||||||| || |||||| ||||||||||| |||||||||    
T  17088255 ttttagtcctacctcctattttcaa-cttcagaaatgcagagaaatggcagttttag 17088310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 501
Target Start/End: Complemental strand, 17088573 - 17088526
Alignment:
Q  453 ctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||| ||||||||  || |||||||||||||||||||||||||||    
T  17088573 ctacctcctattttcaaa-tctagaaacgcagagaaatgacagttttag 17088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 17641806 - 17641750
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  17641806 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 17641750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 44954668 - 44954612
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  44954668 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 44954612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 45048259 - 45048314
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||  |||||||| ||||||||||||| |||||| ||||||||||    
T  45048259 ttttagtcctacctcatattttcaa-ctccagaaacgcatagaaataacagttttag 45048314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 2215 - 2034
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  2215 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2116  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  2115 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttaggcggttttagacctacc 2034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 1665 - 1827
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||| | |||||||||||||||||||    
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 4e-67; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 334 - 518
Target Start/End: Original strand, 5818922 - 5819107
Alignment:
Q  334 tttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatca 432  Q
    |||| |||| ||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  5818922 tttaataggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatca 5819021  T
Q  433 tttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||| ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819022 tttttgttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 5819107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 19359683 - 19359503
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||  |||||||||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttaggcggttttagacctacc 19359503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 338 - 518
Target Start/End: Complemental strand, 8647986 - 8647805
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||    
T  8647986 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 8647887  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| ||||||||||| ||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8647886 tgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagacctacc 8647805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 340 - 518
Target Start/End: Complemental strand, 8461477 - 8461298
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     | ||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttaggcggttttagacctacc 8461298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 14215243 - 14215419
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | ||||||||||||| ||||||||||||||||  | || |||||||||||||||||| ||||||||| ||||||||||||||     
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 14215419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 338 - 518
Target Start/End: Original strand, 24331556 - 24331739
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatca--tt 434  Q
    ||||||||||| ||||||||| | |||||||||||   |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||   ||    
T  24331556 ttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattt 24331655  T
Q  435 tttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||| |||||||| ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24331656 tttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttaggcggttttagacctacc 24331739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 2864756 - 2864932
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | || |||||||||| ||||||||||| || |  |||| |||||||||| ||||||||||||||||||||||||||||||||     
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttaggcggttttagaactacc 2864932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 18182968 - 18183148
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||| ||||| ||||||||| |  |||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||| ||||||||||||||||||| ||||| |  | ||||||||||||||||||||||||||||||| ||||||| ||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttaggcagttttaggcctacc 18183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 2865302 - 2865140
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||||||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 2865140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 340 - 518
Target Start/End: Original strand, 29454739 - 29454918
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    |||||||||  |||||||| |  | |||||||||| ||||||||||| ||||  |||| |||||||||||||||||||||||||| ||||||||||||||    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     | ||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttaggcggttttagacctacc 29454918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 341 - 518
Target Start/End: Original strand, 164191 - 164368
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||| | |||||||||||||||| ||||| ||||| |||| |||||||||||| ||||||||||||||| ||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gt 164289  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttatgcggttttagacctacc 164368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 341 - 501
Target Start/End: Original strand, 8647438 - 8647598
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  8647538 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 8647598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 341 - 518
Target Start/End: Complemental strand, 15709513 - 15709336
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    |||||||| ||||||||| |  | |||||||||| |||||| |||||| ||  |||| ||||||||||||||||||||||||| | ||||||||| ||||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgccctttaaaacagaacaaaacggtcctttagttatcatttctgtt 15709414  T
Q  441 tcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     ||||||||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||||||||||||||||    
T  15709413 gcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttaggcggttttagacctacc 15709336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 339 - 518
Target Start/End: Complemental strand, 16019134 - 16018954
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||| ||||| ||||||||| | ||| ||||||||||||||||||||| |||| |||| ||||||||| |||| |||| ||| |||||||||||||||||    
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||  |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagacggttttagatctacc 16018954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 18183517 - 18183354
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  18183517 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18183418  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| | |||||| |  ||||| |||||||||||||| ||||||||||    
T  18183417 tgttgcatttttcgtcctacccctcatttt-attctccaaaaacgcagagaaataacagttttag 18183354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 5819474 - 5819314
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | |||||||||||||||| |||||||| |  ||||| ||||||| |||||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcaaagaaatgacagttttag 5819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 24362383 - 24362221
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| | ||||| ||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  24362283 gttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 24362221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 340 - 518
Target Start/End: Complemental strand, 25000635 - 25000456
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| |  || ||||||||| ||||||||||| ||||  ||  ||||||||||||||||||| |||| |||||||||||||||||    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || |||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagacggttttagatctacc 25000456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 497
Target Start/End: Original strand, 19359136 - 19359292
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||| ||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtt 497  Q
    | |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtt 19359292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 338 - 501
Target Start/End: Original strand, 15708968 - 15709130
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | || |||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  15708968 ttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 15709067  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||| |||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  15709068 tgttgcatatttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 15709130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 340 - 501
Target Start/End: Complemental strand, 29455288 - 29455127
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| |||| |||| | ||||||||||||  |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||||||||||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  29455188 ttgcatttttcgtcctaccccccatttt-attctccaaaaacgtagagaaatgacagttttag 29455127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 15372421 - 15372258
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||| ||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  15372421 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 15372322  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||| || |||| ||||||||| |   |||| |||||||||||||||||||||||||    
T  15372321 tgttgcattttttgttctacatcccatttt-attttccaaaaacgcagagaaatgacagttttag 15372258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 15371873 - 15372052
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||||| ||||| ||||||  ||||||||||  |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||     
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtt----ttaggcggttttagacctacc 518  Q
    |||||||||||| |||||| |||| ||| ||| |||||||||||||||||| ||||    |||||||||||||||||||||    
T  15371972 catttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagttttaattaggcggttttagacctacc 15372052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 339 - 501
Target Start/End: Original strand, 8460928 - 8461090
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    ||||||||||  |||||||| |  |||| ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| ||||||||||| |||| |||||||| |  ||||| ||| |||||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccatttt-attctccaaaaatgcagagaaatgacagttttag 8461090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 333 - 501
Target Start/End: Complemental strand, 14215796 - 14215628
Alignment:
Q  333 ttttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatc 431  Q
    |||| ||||||||||| ||| ||||| | ||||||||||| | |||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||    
T  14215796 ttttcttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatc 14215697  T
Q  432 atttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||| ||||||||||| || | |||||||| |  ||||| ||||| |||||||||||||||||||    
T  14215696 atttttgttgcatttttcgtcttaacccccatttt-attctccaaaaacgtagagaaatgacagttttag 14215628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 366 - 518
Target Start/End: Original strand, 24361862 - 24362014
Alignment:
Q  366 tgttttggcatactcacgaaactggtactgccttt-taaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccatt 464  Q
    ||||||||| ||| |||||||||| |  |||| || ||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  24361862 tgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatttttcgtcctaccccccatt 24361961  T
Q  465 ttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || |  ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  24361962 tt-attctccacaaacgcagagaaatgatagttttaggcggttttagacctacc 24362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 164739 - 164576
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| | | ||||||| ||| |||||||||  |||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  164739 ttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 164640  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||| |||||||| |||||||| |  ||||| ||| | |||||||||||||||||||    
T  164639 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgtagagaaatgacagttttag 164576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 366 - 518
Target Start/End: Original strand, 24325237 - 24325389
Alignment:
Q  366 tgttttggcatactcacgaaactggtactgccttt-taaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccatt 464  Q
    ||||||||| ||| |||||||||| |  |||| || ||||||||||||||| |||||||||| ||||||||||||  |||||||||||||||| ||||||    
T  24325237 tgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatttttcgtcctaccccccatt 24325336  T
Q  465 ttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    || |  ||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  24325337 tt-attctccacaaacgcagagaaatgatagttttagccggttttagacctacc 24325389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 14464067 - 14463906
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||  | ||||||||||||| |||||||||||||  |  || |||||||||| ||||||||||| |||||||||||||||||||    
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
     || |||||||||||||||  |||| ||| |  ||||| |||||||||||||||||||||||||    
T  14463967 attgcatttttcgtcctac--cccaattttattctccaaaaacgcagagaaatgacagttttag 14463906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 366 - 501
Target Start/End: Complemental strand, 24332083 - 24331945
Alignment:
Q  366 tgttttggcatactcacgaaactggtactgcctttt--aaaacagaacaaaacggtccttcaattatcat-ttttgtttca-tttttcgtcctacctccc 461  Q
    |||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||| |||||||||| ||||||| || |||||||||||||| |||    
T  24332083 tgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgttgcattttttcgtcctacccccc 24331984  T
Q  462 attttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| | |  ||||| |||||||||||||||||||||||||    
T  24331983 attct-attctccaaaaacgcagagaaatgacagttttag 24331945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 341 - 466
Target Start/End: Complemental strand, 7349562 - 7349436
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||  ||||||||||| |||| |||| ||||||||||| ||||||||  ||||||| |||||||||||||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  440 ttcatttttcgtcctacctcccatttt 466  Q
    | || ||||| ||||||| ||||||||    
T  7349462 tgcacttttcatcctaccccccatttt 7349436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 501
Target Start/End: Original strand, 25000112 - 25000250
Alignment:
Q  363 tcgtgttttggcatactcacgaaactggtactgcctt-ttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctccc 461  Q
    |||||||||||| ||||||||||  ||||  |||| | ||||||||||| |||| ||||||| ||||||||||||| || ||||||| |||||||| |||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  462 attttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||| |  ||||| ||||| |||||||||||||||||||    
T  25000212 atttt-attctccaaaaacgtagagaaatgacagttttag 25000250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 341 - 457
Target Start/End: Original strand, 4623148 - 4623265
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| |  |||||||||| | ||||||||||| |||| |||||| |||||||||||||||||  |||||||||||||||||||| |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  440 ttcatttttcgtcctacc 457  Q
      |||||| |||||||||    
T  4623248 ggcattttccgtcctacc 4623265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 422 - 502
Target Start/End: Original strand, 14462686 - 14462770
Alignment:
Q  422 ttcaattatcatttttgtttcatttttcgtcctacctcccattttcaagctc----cagaaacgcagagaaatgacagttttagg 502  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||| |||    |||||||| ||||||||||||||||||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctattttcaaactccagacagaaacgtagagaaatgacagttttagg 14462770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 366 - 466
Target Start/End: Complemental strand, 6019290 - 6019189
Alignment:
Q  366 tgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtttca-tttttcgtcctacctcccat 463  Q
    ||||||||| |||||||||||||| |  ||| |||||||||||||||||||| ||| || |||||||||||||||| || ||||||||||||||||||||    
T  6019290 tgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcattttttcgtcctacctcccat 6019192  T
Q  464 ttt 466  Q
    |||    
T  6019191 ttt 6019189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 428 - 518
Target Start/End: Original strand, 10721873 - 10721962
Alignment:
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||| ||| || || |||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  10721873 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgtagagaaatgacagttttaggcagttttagacctacc 10721962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 466
Target Start/End: Complemental strand, 4222266 - 4222142
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||| | ||||||||||||  | ||||||||| ||||  |||| ||||||||||||||||||  ||| |||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  441 tcatttttcgtcctacctcccatttt 466  Q
     |||||||||||||||| ||||||||    
T  4222166 gcatttttcgtcctacc-cccatttt 4222142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 7348550 - 7348685
Alignment:
Q  332 attttattaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattat 430  Q
    |||||||  |||||||| ||| ||||| | ||| |||||| |  ||||||||||| ||||  |||| |||||||||||||||||||  ||||||  ||||    
T  7348550 attttatatggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttat 7348649  T
Q  431 catttttgtttcatttttcgtcctacctcccatttt 466  Q
    |||||||||| || ||||||||||||| ||||||||    
T  7348650 catttttgttgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 466
Target Start/End: Original strand, 16018588 - 16018713
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| |  |||||||||||| || |||||||| || |  |||| |||||||| |||||||||||||||||||||||| ||||||     
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  439 tttcatttttcgtcctacctcccatttt 466  Q
    || |||||| ||||||||| ||||||||    
T  16018687 ttgcattttccgtcctacc-cccatttt 16018713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 466
Target Start/End: Original strand, 4219663 - 4219788
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcctttt-aaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||||| ||||||||||||  || | || ||| ||||  |||||||| |||||||||||||   |||||| | |||||||||||||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  440 ttcatttttcgtcctacctcccatttt 466  Q
    | |||||||||||||||| ||||||||    
T  4219763 tgcatttttcgtcctacc-cccatttt 4219788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 428 - 518
Target Start/End: Original strand, 27307148 - 27307237
Alignment:
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||| ||| || || |||| ||| ||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  27307148 tatcatgttttttgcagttttagtcttacctcctattttcaa-ctccagaaacgcatagaaatgacagttttaggcagttttagacctacc 27307237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 457
Target Start/End: Original strand, 6018315 - 6018430
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||| ||||| |||||||||||||   ||||||||||||||||  || ||||||||||||||||||||   | ||||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  441 tcatttttcgtcctacc 457  Q
     || |||| ||||||||    
T  6018414 gcagttttagtcctacc 6018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 428 - 518
Target Start/End: Original strand, 28494931 - 28495020
Alignment:
Q  428 tatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||| ||| || || |||| ||||||||||| |||||||| |||||||||||||||||| ||||| |||||||  ||||||||||||||    
T  28494931 tatcatgttttttgcagttttagtcctacctcctattttcaa-ctccagaaacgcagagaagtgacaattttaggtagttttagacctacc 28495020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 4624749 - 4624644
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    ||||||||||  | ||||||||||| ||||  || || ||||||||| ||||||||  || |||||||||||||| |||| |||||||||||||||| ||    
T  4624749 ctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtcctaccccc 4624650  T
Q  461 catttt 466  Q
    ||||||    
T  4624649 catttt 4624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 516
Target Start/End: Complemental strand, 41834500 - 41834430
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagaccta 516  Q
    |||| ||||||||||| |||||||| |||  |||||||||||||||||||||||||| |  |||||||||||    
T  41834500 ttttagtcctacctcctattttcaa-ctcttgaaacgcagagaaatgacagttttagacaattttagaccta 41834430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 27307499 - 27307444
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||| |||||||| ||||||||| |||||||||||||| ||||||    
T  27307499 ttttagtcctacctcctattttcaa-ctccagaaatgcagagaaatgacatttttag 27307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 28495282 - 28495227
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||| |||||||| |||||||| ||||||||||||| ||||||||    
T  28495282 ttttagtcctacctcctattttcaa-ctccagaaccgcagagaaatgatagttttag 28495227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 32305922 - 32305977
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| ||||||||||  |||||||| |||||||||| ||||||||||||||||||||    
T  32305922 ttttagtcctacctcttattttcaa-ctccagaaacacagagaaatgacagttttag 32305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 518
Target Start/End: Complemental strand, 16753003 - 16752939
Alignment:
Q  452 cctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||| |||| |||||||| ||||||||||||||| ||||| ||||||||||| | ||||||||||||    
T  16753003 cctaactcctattttcaa-ctccagaaacgcagaaaaatggcagttttaggcag-tttagacctacc 16752939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 466
Target Start/End: Complemental strand, 13814190 - 13814147
Alignment:
Q  422 ttcaattatcatttttgtttcatttttcgtcctacctcccatttt 466  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||    
T  13814190 ttcaattatcatttttgttgcacttttcgtcctacc-cccatttt 13814147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 28289788 - 28289844
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  28289788 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28289844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 501
Target Start/End: Complemental strand, 28290086 - 28290030
Alignment:
Q  445 ttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||| |||||  |||| | ||||||||||||| |||||||||||||||||    
T  28290086 ttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttag 28290030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 341 - 518
Target Start/End: Complemental strand, 11168 - 10990
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||| | ||||||||||||| |||| ||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||||| |||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttaggcggttttagacctacc 10990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 362 - 501
Target Start/End: Original strand, 10642 - 10781
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    ||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||  |    
T  10642 ctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccctc 10741  T
Q  461 cattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| |  ||||| ||| |||||||||||||||||||||    
T  10742 catttt-attctccaaaaatgcagagaaatgacagttttag 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 112; Significance: 2e-56; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 344 - 518
Target Start/End: Complemental strand, 64847 - 64672
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||| |||||||||||||||| |    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    ||||||||||||| || | |||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||||    
T  64747 atttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttaggcggttttagacctacc 64672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 64301 - 64462
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    ||||||||| ||||||||| | ||||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || ||||||||||| |||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  64401 ttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 64462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 501
Target Start/End: Complemental strand, 205877 - 205754
Alignment:
Q  377 actcacgaaactggtactgcct-tttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccattttcaagctcca 475  Q
    |||||||||| |||| |||||| ||| |||  ||||||||| |||| | || |||||| ||| || || |||| ||||||| ||| |||||||| |||||    
T  205877 actcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttgcagttttagtcctacgtcctattttcaa-ctcca 205780  T
Q  476 gaaacgcagagaaatgacagttttag 501  Q
     ||||||||||||||| |||||||||    
T  205779 aaaacgcagagaaatggcagttttag 205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 341 - 501
Target Start/End: Complemental strand, 1286 - 1125
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 439  Q
    |||||||| ||||||||  | ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  440 ttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    | ||| ||||||||||||||| |||||||| | ||||||||||||| ||||| |||||||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttag 1125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 343 - 501
Target Start/End: Original strand, 755 - 912
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| |  |||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||     
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||||||||||||| |||||||| |  ||||| |||||||||||||| ||||||||||    
T  854 catttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 337 - 501
Target Start/End: Original strand, 4789 - 4953
Alignment:
Q  337 attaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattt 435  Q
    |||||||||||| ||||||||| | ||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  4789 attaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 4888  T
Q  436 ttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||| |||||||||||||||| |||||||| |  ||||| |||||||||||||| ||||||||||    
T  4889 ttgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaataacagttttag 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 5334 - 5162
Alignment:
Q  343 cttaataacacttttgattctcgtgttttggcatactcacgaaactggtactg-ccttttaaaacagaacaaaacggtccttcaattatcatttttgttt 441  Q
    |||||| ||||||||| | ||||||||||||| || |||||||||||||  || ||||||||||||||| ||||||||  |||||||||||||||||||     
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  442 catttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    |||||||||||||    || |||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  5234 catttttcgtcct----cctattttcaaactccagaaacgcagaaaaatgacagttttaggcggttttagacttacc 5162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 362 - 518
Target Start/End: Complemental strand, 17020 - 16863
Alignment:
Q  362 ctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcc 460  Q
    ||||||||||| | |||||||||||||| | | ||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  17020 ctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacctcc 16921  T
Q  461 cattttcaagctccagaaacgcagagaaatgacagttttaggcggttttagacctacc 518  Q
     |||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||    
T  16920 tattttcaaactccagaaacgcagagaaattacagttttaggcgattttagacctacc 16863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 408 - 501
Target Start/End: Original strand, 16564 - 16656
Alignment:
Q  408 gaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccatttt-attctccaaaaacgcagagaaatgacagttttag 16656  T

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Target: scaffold0273 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 339 - 501
Target Start/End: Complemental strand, 4754 - 4592
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||||| ||||||||| |  ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||    
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  438 gtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||| |||||||||||||||| |||||||| |  ||||| |||| ||||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccatttt-attctccaaaaacacagagaaatgacagttttag 4592  T

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Target: scaffold0273; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 380 - 518
Target Start/End: Original strand, 4242 - 4381
Alignment:
Q  380 cacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccattttcaagctccagaa 478  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||| | ||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  479 acgcagagaaatgacagttttaggcggttttagacctacc 518  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttaggcggttttagacctacc 4381  T

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Target: scaffold0027 (Bit Score: 91; Significance: 7e-44; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 344 - 501
Target Start/End: Original strand, 42172 - 42330
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||  ||||||||||||||  || ||||||||||| | ||||| ||||||||||||||||||||||| ||||||||||||||||||| |    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||||| ||| ||||||| |||||||| || ||||||||||||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttag 42330  T

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Target: scaffold0027; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 42706 - 42544
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| | |||||||   ||||||||||||  |||||| ||||||| | ||||| |||||||||||||||||||||||||||| ||||||||||    
T  42706 ttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 42607  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    ||||||||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  42606 tgtttcatttttcgtcctacc-cccatttt-attctccaaaaacgcagagaaatgacagttttag 42544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 338 - 501
Target Start/End: Complemental strand, 134221 - 134058
Alignment:
Q  338 ttaggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 436  Q
    ||||||||||| ||||||||| | ||||||||||||| ||||||||||||| ||  |||| |||||| ||||||||||||| ||||||||||| ||||||    
T  134221 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttt 134122  T
Q  437 tgtttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    |||| |||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||    
T  134121 tgttgcatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 134058  T

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Target: scaffold0432 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 344 - 500
Target Start/End: Complemental strand, 10414 - 10259
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||| | ||||||||||||  ||||||||||||||||  | || ||||||||||||||||||||||||||||||||||||||||||| |    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagtttta 500  Q
    ||||||||||||||| |||||||| |  ||||| |||  |||||||||||||||||||    
T  10314 atttttcgtcctacc-cccatttt-attctccaaaaattcagagaaatgacagtttta 10259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 344 - 510
Target Start/End: Original strand, 9935 - 10100
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||| ||||| | |||||||||| || || ||||||||||| |  |||| |||||| | ||||||||| |||||||||||||||| ||||||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  443 atttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttaggcggtttta 510  Q
    | ||||| |||||||||| |||||||| ||| ||||||| |||||||||||| |||||||||||||||    
T  10035 a-ttttcatcctacctcctattttcaaactcaagaaacg-agagaaatgacaattttaggcggtttta 10100  T

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Target: scaffold0176 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 340 - 501
Target Start/End: Original strand, 18834 - 18994
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    |||||| || ||||||||| | ||  ||||||||| ||||||||||||||||  |||| |||||||||| ||||||||||| ||||||||||||||||||    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  439 tttcatttttcgtcctacctcccattttcaagctccagaaacgcagagaaatgacagttttag 501  Q
    || |||||||| ||||||| |||||||| |  ||||| |||||||||||||| ||||||||||    
T  18934 ttgcatttttcatcctacc-cccatttt-attctccaaaaacgcagagaaataacagttttag 18994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 341 - 437
Target Start/End: Complemental strand, 19166 - 19069
Alignment:
Q  341 ggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcattttt 437  Q
    |||||||| ||||||||| | ||||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 342 - 465
Target Start/End: Original strand, 568 - 692
Alignment:
Q  342 gcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||| || |  |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  441 tcatttttcgtcctacctcccattt 465  Q
      ||||||||||  |||||||||||    
T  668 gtatttttcgtctcacctcccattt 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 340 - 466
Target Start/End: Complemental strand, 28789 - 28662
Alignment:
Q  340 aggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttg 438  Q
    |||| |||| ||||||||| |  |||||||||||| |||| |||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  439 tttcatttttcgtcctacctcccatttt 466  Q
    || || |||||||||| || ||||||||    
T  28689 ttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 344 - 466
Target Start/End: Complemental strand, 62000 - 61877
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 442  Q
    ||||| ||||||||||| ||||||||||||  ||||||||||| |||| || || |||||||| |||||||||   || ||||| |||||||||||||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  443 atttttcgtcctacctcccatttt 466  Q
    ||||||||||||||| ||||||||    
T  61900 atttttcgtcctaccccccatttt 61877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 414
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  339 taggcttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaa 414  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||||||| || | ||||| |||||||| ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 471 - 565
Alignment:
Q  363 tcgtgttttggcatactcacgaaactggtactgc-cttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctac 456  Q
    |||||||||||| ||||||||||| ||||  ||  ||||||||||| |||| ||  ||||||||||||||||||||||| |||||||||||||||    
T  471 tcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgcatttttcgtcctac 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 396 - 466
Target Start/End: Complemental strand, 7777 - 7707
Alignment:
Q  396 ccttttaaaacagaacaaaacggtccttcaattatcatttttgtttcatttttcgtcctacctcccatttt 466  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||| |||||||||||||||| || |||||    
T  7777 ccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctatttt 7707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 440
Target Start/End: Complemental strand, 8551 - 8454
Alignment:
Q  344 ttaataacacttttgattctcgtgttttggcatactcacgaaactggtactgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgtt 440  Q
    ||||| ||||||||| |  || ||||||||  |||| ||||||||||| || || |||||||||| | ||||||||||||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgtt 8454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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