View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5625_low_13 (Length: 353)
Name: NF5625_low_13
Description: NF5625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5625_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 40810167 - 40810503
Alignment:
| Q |
1 |
cacagactccattatggtaattgggcagccacatgataactgtagcacttgaactttcggtcaaacatagatttaaaaagtattttgtatacatttgcat |
100 |
Q |
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| T |
40810167 |
cacagactccattatggtaattgggcagccacatgataactgtagtacttgaactttcggtcaaacatagatttaaaaagtattttgtatacatttgcaa |
40810266 |
T |
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| Q |
101 |
acgaaaacaaattttttgaagaagggtgacaaacttatatttacattctttaaatctccatgttttacaaaagttaaaattatgcatggtggtatattag |
200 |
Q |
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| T |
40810267 |
acgaaaacaatttttttgaagaagggtgacaaacttatatttacattctttaaatctccatgttttacaaaagttaaaattatgcatggtggtatattag |
40810366 |
T |
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| Q |
201 |
atgttgtgtaatactattttcttaatggtactacattaataccaggacttaattaagcagttccatgttctatgtatttgttcaaaggttaactatcgac |
300 |
Q |
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| T |
40810367 |
atgttgtgtaatactattttcttaatggtactacattaataccagtacttaattaagcagttccatgttctatgtatttgttcaaaggttaactatcgac |
40810466 |
T |
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| Q |
301 |
tatgattgctgttgacatattgaagagggctaagaca |
337 |
Q |
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| T |
40810467 |
gaggattgctgttgacatattgaagagggctaagaca |
40810503 |
T |
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