View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5625_low_5 (Length: 567)

Name: NF5625_low_5
Description: NF5625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5625_low_5
NF5625_low_5
[»] chr1 (33 HSPs)
chr1 (7-489)||(51263012-51263490)
chr1 (149-236)||(11241551-11241638)
chr1 (157-246)||(44665378-44665467)
chr1 (172-236)||(52353860-52353924)
chr1 (179-236)||(11120548-11120604)
chr1 (169-246)||(23333745-23333822)
chr1 (180-246)||(13984034-13984100)
chr1 (180-246)||(32851821-32851887)
chr1 (180-246)||(42831641-42831707)
chr1 (180-246)||(43822772-43822838)
chr1 (180-236)||(36297979-36298035)
chr1 (180-228)||(38902003-38902051)
chr1 (182-233)||(47783728-47783779)
chr1 (180-246)||(11569979-11570045)
chr1 (179-235)||(9505556-9505612)
chr1 (180-236)||(36166888-36166944)
chr1 (179-234)||(40287061-40287114)
chr1 (181-236)||(38601034-38601088)
chr1 (180-246)||(11566941-11567007)
chr1 (180-246)||(25813733-25813798)
chr1 (274-376)||(38902064-38902166)
chr1 (172-234)||(51061695-51061757)
chr1 (86-235)||(3623121-3623265)
chr1 (179-235)||(31133165-31133221)
chr1 (180-246)||(27544368-27544434)
chr1 (181-246)||(32451819-32451885)
chr1 (180-242)||(33041440-33041502)
chr1 (180-233)||(641831-641883)
chr1 (180-233)||(40634393-40634446)
chr1 (191-236)||(43506265-43506310)
chr1 (180-227)||(24555864-24555912)
chr1 (179-246)||(38118929-38118997)
chr1 (279-323)||(42831751-42831795)
[»] chr3 (15 HSPs)
chr3 (156-236)||(36902395-36902475)
chr3 (180-233)||(46006152-46006205)
chr3 (179-246)||(41211979-41212045)
chr3 (180-246)||(52995714-52995780)
chr3 (157-246)||(26085040-26085129)
chr3 (180-231)||(55272804-55272855)
chr3 (180-246)||(30595143-30595209)
chr3 (179-236)||(19900203-19900260)
chr3 (176-242)||(47075613-47075679)
chr3 (179-236)||(33832012-33832069)
chr3 (169-246)||(3973458-3973534)
chr3 (169-246)||(3996343-3996419)
chr3 (169-246)||(3993557-3993633)
chr3 (169-246)||(4009869-4009945)
chr3 (180-236)||(36277834-36277893)
[»] chr8 (48 HSPs)
chr8 (180-246)||(9134147-9134213)
chr8 (180-236)||(18806640-18806696)
chr8 (180-246)||(5139737-5139803)
chr8 (181-235)||(6427175-6427229)
chr8 (180-246)||(6519104-6519170)
chr8 (179-235)||(23982239-23982295)
chr8 (180-246)||(2603134-2603200)
chr8 (180-246)||(11777729-11777795)
chr8 (180-246)||(28567803-28567869)
chr8 (180-246)||(28575396-28575462)
chr8 (180-246)||(31226531-31226597)
chr8 (180-246)||(35468329-35468395)
chr8 (180-232)||(5535869-5535921)
chr8 (180-236)||(9604574-9604630)
chr8 (179-234)||(5569223-5569278)
chr8 (191-246)||(5978578-5978633)
chr8 (179-246)||(12734038-12734104)
chr8 (180-235)||(16531642-16531697)
chr8 (183-246)||(31128618-31128681)
chr8 (180-242)||(28540667-28540729)
chr8 (171-236)||(37673833-37673898)
chr8 (190-246)||(7288228-7288284)
chr8 (180-236)||(10954144-10954200)
chr8 (180-236)||(10962149-10962205)
chr8 (176-232)||(13629113-13629169)
chr8 (176-232)||(13729525-13729581)
chr8 (179-235)||(35973459-35973515)
chr8 (179-233)||(3628224-3628278)
chr8 (180-246)||(9133799-9133864)
chr8 (180-246)||(14426182-14426248)
chr8 (180-246)||(28562305-28562371)
chr8 (182-239)||(1737797-1737854)
chr8 (182-246)||(4797295-4797360)
chr8 (179-236)||(8673671-8673728)
chr8 (179-232)||(38937787-38937840)
chr8 (180-236)||(23036790-23036846)
chr8 (268-312)||(31128542-31128586)
chr8 (179-223)||(40453083-40453127)
chr8 (279-350)||(13079888-13079959)
chr8 (199-246)||(30714111-30714158)
chr8 (199-246)||(30721888-30721935)
chr8 (268-374)||(9135096-9135201)
chr8 (194-236)||(23812644-23812686)
chr8 (180-242)||(28557242-28557304)
chr8 (180-246)||(1155198-1155268)
chr8 (327-376)||(4326066-4326115)
chr8 (178-231)||(36316756-36316808)
chr8 (268-312)||(1155122-1155166)
[»] chr4 (34 HSPs)
chr4 (157-233)||(16461108-16461184)
chr4 (179-246)||(30865886-30865953)
chr4 (183-246)||(35309047-35309110)
chr4 (179-246)||(39055157-39055224)
chr4 (180-246)||(35382425-35382491)
chr4 (180-236)||(35332055-35332111)
chr4 (180-236)||(43968777-43968833)
chr4 (169-233)||(53779428-53779492)
chr4 (180-246)||(49211023-49211089)
chr4 (157-232)||(10180689-10180764)
chr4 (180-246)||(822441-822507)
chr4 (173-235)||(24030614-24030676)
chr4 (161-246)||(23359079-23359164)
chr4 (107-246)||(11346902-11347042)
chr4 (190-246)||(22628474-22628530)
chr4 (157-236)||(2574121-2574200)
chr4 (180-235)||(8824960-8825014)
chr4 (188-246)||(12447422-12447480)
chr4 (180-246)||(39629255-39629321)
chr4 (180-246)||(52199799-52199865)
chr4 (179-236)||(2322503-2322560)
chr4 (179-236)||(2396293-2396350)
chr4 (180-232)||(41916063-41916115)
chr4 (174-246)||(54018511-54018583)
chr4 (107-236)||(44500415-44500545)
chr4 (268-312)||(52199897-52199941)
chr4 (187-246)||(26699009-26699068)
chr4 (179-233)||(28509468-28509522)
chr4 (180-245)||(31262477-31262545)
chr4 (171-225)||(53847302-53847355)
chr4 (180-233)||(45832565-45832617)
chr4 (341-377)||(2066115-2066151)
chr4 (180-220)||(5036047-5036087)
chr4 (180-236)||(23607349-23607405)
[»] chr7 (37 HSPs)
chr7 (180-246)||(36901099-36901165)
chr7 (180-246)||(43302180-43302246)
chr7 (179-246)||(46282192-46282259)
chr7 (151-233)||(19594016-19594098)
chr7 (180-246)||(23156302-23156368)
chr7 (180-246)||(36482068-36482134)
chr7 (180-246)||(44441349-44441415)
chr7 (179-246)||(48767219-48767286)
chr7 (179-233)||(4874941-4874995)
chr7 (173-235)||(36039044-36039106)
chr7 (180-246)||(36657950-36658016)
chr7 (184-246)||(39853769-39853831)
chr7 (157-246)||(31330367-31330456)
chr7 (114-246)||(38223904-38224037)
chr7 (158-246)||(4958212-4958300)
chr7 (180-246)||(37698484-37698550)
chr7 (173-233)||(2008578-2008638)
chr7 (179-235)||(15018374-15018430)
chr7 (151-227)||(19753042-19753118)
chr7 (157-236)||(25324573-25324651)
chr7 (183-234)||(29914477-29914528)
chr7 (179-246)||(36656670-36656737)
chr7 (179-246)||(47841484-47841551)
chr7 (177-219)||(2888137-2888179)
chr7 (180-246)||(5513909-5513975)
chr7 (180-246)||(44441587-44441653)
chr7 (179-236)||(6068092-6068149)
chr7 (179-235)||(13057864-13057921)
chr7 (179-236)||(43095504-43095561)
chr7 (181-221)||(3373275-3373315)
chr7 (179-219)||(21122071-21122111)
chr7 (177-236)||(31027263-31027322)
chr7 (199-246)||(41172572-41172619)
chr7 (179-233)||(27334367-27334421)
chr7 (179-225)||(32724226-32724272)
chr7 (180-234)||(46748101-46748155)
chr7 (333-378)||(32724394-32724439)
[»] chr5 (26 HSPs)
chr5 (180-246)||(2375544-2375610)
chr5 (180-246)||(13420770-13420836)
chr5 (180-237)||(1309833-1309890)
chr5 (180-236)||(13486580-13486636)
chr5 (179-233)||(14642291-14642344)
chr5 (179-236)||(6761440-6761497)
chr5 (178-246)||(42951794-42951862)
chr5 (180-246)||(12593121-12593188)
chr5 (178-235)||(20420163-20420220)
chr5 (180-236)||(7293042-7293098)
chr5 (179-226)||(22579668-22579715)
chr5 (180-246)||(18396580-18396646)
chr5 (180-246)||(26675541-26675607)
chr5 (180-246)||(26947149-26947215)
chr5 (179-233)||(34382547-34382601)
chr5 (182-232)||(35463304-35463354)
chr5 (178-227)||(35982138-35982187)
chr5 (180-236)||(15468194-15468250)
chr5 (179-246)||(3558767-3558834)
chr5 (180-231)||(11200732-11200783)
chr5 (187-233)||(1666847-1666893)
chr5 (191-233)||(29558344-29558386)
chr5 (285-358)||(26675419-26675492)
chr5 (285-358)||(26947027-26947100)
chr5 (180-241)||(28998064-28998125)
chr5 (157-246)||(41520924-41521013)
[»] chr6 (11 HSPs)
chr6 (180-236)||(32658497-32658553)
chr6 (181-235)||(25099074-25099128)
chr6 (157-246)||(387697-387787)
chr6 (180-246)||(5002432-5002498)
chr6 (179-227)||(9491836-9491884)
chr6 (180-236)||(21941003-21941059)
chr6 (180-236)||(22281839-22281895)
chr6 (157-236)||(7693995-7694074)
chr6 (180-235)||(6988172-6988227)
chr6 (180-246)||(32977434-32977500)
chr6 (179-235)||(18804249-18804305)
[»] chr2 (28 HSPs)
chr2 (179-246)||(6459074-6459141)
chr2 (180-236)||(5038707-5038763)
chr2 (179-246)||(34234879-34234946)
chr2 (180-246)||(44887302-44887368)
chr2 (85-235)||(11921843-11921995)
chr2 (180-236)||(32887674-32887730)
chr2 (176-232)||(34820955-34821011)
chr2 (179-246)||(13022786-13022853)
chr2 (181-236)||(40999675-40999730)
chr2 (180-246)||(36887631-36887697)
chr2 (99-232)||(41068866-41068998)
chr2 (183-236)||(26312470-26312523)
chr2 (268-376)||(15269291-15269399)
chr2 (180-232)||(45135758-45135810)
chr2 (190-233)||(6710946-6710989)
chr2 (266-376)||(11922036-11922146)
chr2 (176-233)||(37648364-37648422)
chr2 (179-232)||(16117988-16118041)
chr2 (181-233)||(26297112-26297164)
chr2 (179-246)||(65455-65522)
chr2 (179-246)||(34375045-34375111)
chr2 (179-229)||(6562937-6562986)
chr2 (266-312)||(26312563-26312609)
chr2 (183-236)||(3668837-3668890)
chr2 (179-244)||(3949044-3949109)
chr2 (179-232)||(16341932-16341985)
chr2 (180-236)||(9583138-9583194)
chr2 (179-235)||(44583437-44583493)
[»] scaffold0991 (1 HSPs)
scaffold0991 (179-240)||(2951-3012)
[»] scaffold0712 (1 HSPs)
scaffold0712 (179-235)||(6133-6189)
[»] scaffold0709 (1 HSPs)
scaffold0709 (179-235)||(6151-6207)
[»] scaffold0017 (1 HSPs)
scaffold0017 (180-233)||(31877-31929)


Alignment Details
Target: chr1 (Bit Score: 281; Significance: 1e-157; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 7 - 489
Target Start/End: Original strand, 51263012 - 51263490
Alignment:
Q  7 aaaaagagtccttacaccatctttaatgagagaattttaaacatttaagatttattgcatattagatgctccattggcacctattagatactccattgaa 106  Q
    ||||| |||||||||||||||||||||| |||| ||||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||   |||||||    
T  51263012 aaaaaaagtccttacaccatctttaatgggagagttttaaatatttaagattcattgcctattagatgctccattgacacctattagatatctcattgaa 51263111  T
Q  107 gagaaacttttttggggtcttataagatacgcaatttcacttaa-actctaaatcttaagagagatccatacatttttaatattaaaaaattaaaatata 205  Q
    || ||||||||| ||||| |||||| |||| || ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51263112 gataaactttttcggggttttataaaatacacagttttacttaagactctaaatcttaagagagatccatacatttttaatattaaaaaattaaaatata 51263211  T
Q  206 atgacataaagttattgatagttgattagtgtgtctcatttnnnnnnnntttgagatgctgaattgaa---------tgctcattaggtactactattga 296  Q
    |||||||||||||||||||||||||||||||||| ||||||        | |||||||||||||||||         |||||||||||||||| ||||||    
T  51263212 atgacataaagttattgatagttgattagtgtgtttcatttaagaaatttgtgagatgctgaattgaaatgattgagtgctcattaggtactattattga 51263311  T
Q  297 aaatttataaatgagtaacatgcacatataagactcatttaagtatccaaaaatatgtgtcttctttgtggatgctcttattgtcttattttacatcatt 396  Q
    |||||||||||||||||||||||||||||||||| ||      |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51263312 aaatttataaatgagtaacatgcacatataagaccca------tatccaaaaatatgtgtcttctttgtagatgctcttattgtcttattttacatcatt 51263405  T
Q  397 taatctttaaacttgaaaaaatagtattttgttttgtttgtaacattgattagagggagaggccgagagggagtctataaacttgaaaaatag 489  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  51263406 tagtctataaacttgaaaaaatagtattttgttttgtttgtaacattgattagagg--------gagagggagtctataaacttgaaaaatag 51263490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 11241638 - 11241551
Alignment:
Q  149 aaactctaaatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||| | ||||||| | |||||| || |||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  11241638 aaactctcattcttaagtgggatccacacttttttaatattataaaattgaaatataatgatataaagttattgatagttgattagtg 11241551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 44665467 - 44665378
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||| ||||  |||||  |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| | ||||||    
T  44665467 aatcttaagcgagactcatactcttttaatattaaaaaattgaaatataatgatataaaattattgatagttgattagtgtatttcattt 44665378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 52353924 - 52353860
Alignment:
Q  172 ccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  52353924 ccatacttttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtg 52353860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 11120548 - 11120604
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  11120548 tttttaatattaaaa-attaaaatataatgatataaagttattgatagttgattagtg 11120604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 23333745 - 23333822
Alignment:
Q  169 gatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||| ||| ||||||||||||||||||| ||||||||| | ||||||||||||||| ||||| |||| |||||||||    
T  23333745 gatccgtacttttttaatattaaaaaattgaaatataataatataaagttattgatatttgatcagtgagtctcattt 23333822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 13984034 - 13984100
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||  |||||||||    
T  13984034 ttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtaggtctcattt 13984100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 32851887 - 32851821
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| |||| || ||| ||||| |||||||||||||||||||||||| |||||    
T  32851887 ttttaatattaaaaaattgaaatgtagtgatataaaattattgatagttgattagtgtgtcccattt 32851821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 42831641 - 42831707
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||  ||||||||    
T  42831641 ttttaatattaaaaaattaaaatgtaatgatataaaattattgatagttgattaatggatctcattt 42831707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 43822772 - 43822838
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| |||| || ||| |||||||||||||||||||||||||| ||| |||||    
T  43822772 ttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtgggtcccattt 43822838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 36297979 - 36298035
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| |||| |||||| ||||| ||||||||||||||||||||    
T  36297979 ttttaatattaaaaaattgaaatgtaatgatataaaattattgatagttgattagtg 36298035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 38902003 - 38902051
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagtt 228  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  38902003 ttttaatattaaaaaattaaaatataatgatataaagttattaatagtt 38902051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 47783779 - 47783728
Alignment:
Q  182 ttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  47783779 ttaatattaaaaaattgaaatataatgatataaaattattgatagttgatta 47783728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 11570045 - 11569979
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||| ||||||||||||| |||| |||||| ||||||||||||||||||||||| |  |||||||||    
T  11570045 tttttatattaaaaaattgaaatgtaatgatataaagttattgatagttgattaataagtctcattt 11569979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 9505612 - 9505556
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||||||| | || |||| | |||||||||||||||||||||||||    
T  9505612 tttttaatattaaaaaatttatatgtaataatataaagttattgatagttgattagt 9505556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 36166888 - 36166944
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||| ||||||||||||| || ||| |||||||||||||||||| |||||||    
T  36166888 ttttaatatgaaaaaattaaaatgtagtgatataaagttattgatagtttattagtg 36166944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 40287114 - 40287061
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattag 234  Q
    |||||||||||||||||||||||| |||||  ||||| ||||||||||||||||||    
T  40287114 tttttaatattaaaaaattaaaatgtaatg--ataaaattattgatagttgattag 40287061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 38601088 - 38601034
Alignment:
Q  181 tttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||| ||||||| |||||| ||||||||||||||| ||||||||||    
T  38601088 tttaatattaaaaa-ttaaaatgtaatgatataaagttattgataattgattagtg 38601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 11567007 - 11566941
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||| ||||||||||| | |||| |||||| ||||||||||||||||||||||| |  |||||||||    
T  11567007 tttttatattaaaaaaatgaaatgtaatgatataaagttattgatagttgattaataagtctcattt 11566941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 25813733 - 25813798
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||| ||||| | || ||| ||||| |||||||||||||||||||| |||||||||    
T  25813733 ttttaatattaaaaatttaaa-tgtagtgatataaaattattgatagttgattagtgggtctcattt 25813798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 376
Target Start/End: Original strand, 38902064 - 38902166
Alignment:
Q  274 tgctcattaggtactactattgaaaatttataaatgagtaacatgcacatataagactcatttaagtatccaaaaatatgtgtcttctttgtggatgctc 373  Q
    |||| |||||||||||||||| |||| |||||||||||| | ||| |||  | |||| |||||||| | ||||||||  |||||| | |||||| |||||    
T  38902064 tgcttattaggtactactattaaaaaattataaatgagtgatatgtacacgtgagacccatttaagaacccaaaaatgagtgtctccattgtgggtgctc 38902163  T
Q  374 tta 376  Q
    |||    
T  38902164 tta 38902166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Complemental strand, 51061757 - 51061695
Alignment:
Q  172 ccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattag 234  Q
    |||||| ||||||| ||||||||||| |||| |||||| | ||||||||||||||| ||||||    
T  51061757 ccatacttttttaaaattaaaaaattgaaatgtaatgatagaaagttattgatagtagattag 51061695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 3623265 - 3623121
Alignment:
Q  86 cctattagatactccattgaagagaaacttttttggggtcttataagatacgcaatttcacttaaactctaaatcttaagagagatccatacatttttaa 185  Q
    |||||||||||| |||||  ||| ||||||||||||| ||||||||||  ||   | ||||||||   | |||||||||| |  |||   || |||||||    
T  3623265 cctattagataccccattagagacaaacttttttgggttcttataagacccgatgtctcacttaagaccaaaatcttaagtggaatcttcacttttttaa 3623166  T
Q  186 tattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||     |||||||||  ||||||||||||||||||||||||    
T  3623165 tattaaaaaa-----atataatgatctaaagttattgatagttgattagt 3623121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 31133221 - 31133165
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    |||||||||||||| |||| |||| |||||| || || |||||||||||||||||||    
T  31133221 tttttaatattaaataatttaaatgtaatgatatgaaattattgatagttgattagt 31133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 27544368 - 27544434
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||| || |||| ||||||| |||||||| ||||| ||| ||| || |||||||||    
T  27544368 ttttaatattaaaaagttgaaatgtaatgacttaaagttagtgataattgtttaatgggtctcattt 27544434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 32451885 - 32451819
Alignment:
Q  181 tttaatattaaaaaat-taaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||  | ||||| ||||| ||||||||||||||| || ||||||| |||||||||    
T  32451885 tttaatattaaaaaaaatgaaatacaatgatataaagttattgataatttattagtgggtctcattt 32451819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 33041440 - 33041502
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctc 242  Q
    |||||||||||||| ||| | || |||||| ||||| |||||||||||| ||||||| |||||    
T  33041440 ttttaatattaaaatattgatatgtaatgatataaaattattgatagttaattagtgagtctc 33041502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 641883 - 641831
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||||||| || | || |||||| |||||||||||||||||||||||    
T  641883 ttttaatattaaaaa-ttgatatgtaatgatataaagttattgatagttgatta 641831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 40634446 - 40634393
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||| || ||||||||  ||||| |||||||||||||||| ||||||    
T  40634446 ttttaatattagaatattaaaatgcaatgatataaagttattgatagatgatta 40634393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 43506265 - 43506310
Alignment:
Q  191 aaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||| |||| |||| | ||||||||||||||||||||||||||    
T  43506265 aaaaattgaaatgtaataatataaagttattgatagttgattagtg 43506310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 24555912 - 24555864
Alignment:
Q  180 ttttaatattaaaaaa-ttaaaatataatgacataaagttattgatagt 227  Q
    |||||||||||||||| || ||||||||||| ||||| |||||||||||    
T  24555912 ttttaatattaaaaaaattgaaatataatgatataaaattattgatagt 24555864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 38118997 - 38118929
Alignment:
Q  179 tttttaatattaaaaaat-taaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||  | |||| |||| | ||||| ||||||||||||||||| || |||||||||    
T  38118997 tttttaatattaaaaaacctgaaatgtaataatataaaattattgatagttgattaatgagtctcattt 38118929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 42831751 - 42831795
Alignment:
Q  279 attaggtactactattgaaaatttataaatgagtaacatgcacat 323  Q
    |||||||||||||||| |||| |||||||||||||| ||| ||||    
T  42831751 attaggtactactattaaaaaattataaatgagtaatatgtacat 42831795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 36902475 - 36902395
Alignment:
Q  156 aaatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||| ||||| |||||||| ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36902475 aaattttaagtgagatccaaaccgttttaatattaaaaaattaaaatataatgatataaagttattgatagttgattagtg 36902395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 46006205 - 46006152
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46006205 ttttaatattaaaaaattaaaatataatgatataaagttattgatagttgatta 46006152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 41211979 - 41212045
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  41211979 tttttaatattaaaa-attaaaatgtaatgatataaagttattgatagttgattagtatgtctcattt 41212045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 52995780 - 52995714
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  52995780 ttttaatattaaaaaaattaaagataatgatataaagttattgatagttgattagtatgtctcattt 52995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 26085040 - 26085129
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||| | |||||| |  ||||||||||||||||||| ||||||||||  |||||||||||||| |||||| |||||||| |||||    
T  26085040 aatcttaagtgggatccacatttttttaatattaaaaaattgaaatataatggtataaagttattgatggttgataagtgtgtcccattt 26085129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 55272804 - 55272855
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgat 231  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  55272804 ttttaatattaaaaaattgaaatataatgatataaagttattgatagttgat 55272855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 30595209 - 30595143
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||| |||||||||||| |||| |||||| ||||| |||||||||||||||||||| |||||||||    
T  30595209 ttttagtattaaaaaatttaaatgtaatgatataaaattattgatagttgattagtgagtctcattt 30595143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 19900260 - 19900203
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||    
T  19900260 tttttaatattaaaaaattaaaatgtaatgatataaaattatttatagttgattagtg 19900203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 47075679 - 47075613
Alignment:
Q  176 acatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctc 242  Q
    |||||||||||||||||||||| | || |||||| ||||| |||| ||||||||||||||| |||||    
T  47075679 acatttttaatattaaaaaattgatatgtaatgatataaaattatagatagttgattagtgagtctc 47075613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 33832069 - 33832012
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||||||| | |||||| || || ||||||||||||||||||||    
T  33832069 tttttaatattaaaaaattaaattgtaatgatatgaaattattgatagttgattagtg 33832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 3973534 - 3973458
Alignment:
Q  169 gatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||  |||||||||||||||| ||||||| |||||| ||||| |||||||| ||||||||  | |||||||||    
T  3973534 gatccatatttttttaatattaaaaa-ttaaaatgtaatgatataaatttattgatggttgattaacgagtctcattt 3973458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 3996343 - 3996419
Alignment:
Q  169 gatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||  ||||||||||||||| |||||||| |||||| ||||| |||||||| ||||||||  | |||||||||    
T  3996343 gatccatatttttttaatattaaaa-attaaaatgtaatgatataaatttattgatggttgattaacgagtctcattt 3996419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 3993557 - 3993633
Alignment:
Q  169 gatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||  ||||||||||| ||||||| |||| |||||| ||||| |||||||| ||||||||  | |||||||||    
T  3993557 gatccatatttttttaatatt-aaaaattgaaatgtaatgatataaatttattgatggttgattaacgagtctcattt 3993633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 4009869 - 4009945
Alignment:
Q  169 gatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||  ||||||||||| ||||||| |||| |||||| ||||| |||||||| ||||||||  | |||||||||    
T  4009869 gatccatatttttttaatatt-aaaaatttaaatgtaatgatataaatttattgatggttgattaacgagtctcattt 4009945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 36277893 - 36277834
Alignment:
Q  180 ttttaatattaaaaaattaaaat---ataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| ||||   ||||||| ||||||||||||||| || |||||||    
T  36277893 ttttaatattaaaaaattgaaatgtaataatgatataaagttattgatattttattagtg 36277834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 9134147 - 9134213
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9134147 ttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgagtctcattt 9134213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 18806696 - 18806640
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18806696 ttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtg 18806640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 5139803 - 5139737
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| || ||||||    
T  5139803 ttttaatattaaaaaatgaaaatataatgatataaaattattgatagttgattagtgagtttcattt 5139737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 6427229 - 6427175
Alignment:
Q  181 tttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  6427229 tttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagt 6427175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 6519170 - 6519104
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||| |||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||||    
T  6519170 ttttagtattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcattt 6519104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 23982239 - 23982295
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  23982239 tttttaatattaaaaaattgaaatataatgatataaagttattgatagttggttagt 23982295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 2603200 - 2603134
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||  ||||||||    
T  2603200 ttttaatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtggatctcattt 2603134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 11777795 - 11777729
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||| || |||| |||||| |||||||||||||||||||||||||  |||||||||    
T  11777795 ttttaatattaaaaagttgaaatgtaatgatataaagttattgatagttgattagtaggtctcattt 11777729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 28567803 - 28567869
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||  ||| |||||||    
T  28567803 ttttaatattaaaaaattgaaatataatgatataaagttattgatagttgcttatcgtggctcattt 28567869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 28575396 - 28575462
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||  ||| |||||||    
T  28575396 ttttaatattaaaaaattgaaatataatgatataaagttattgatagttgcttatcgtggctcattt 28575462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 31226597 - 31226531
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| |||||    
T  31226597 ttttaatattaaaaaattgaaatataatgatataaaattattgatagttgagtagtgggtcccattt 31226531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 35468329 - 35468395
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| |||| || || ||||||||||||||||||| ||||||| |||||||||    
T  35468329 ttttaatattaaaaaattcaaatgtagtggcataaagttattgatagttaattagtgagtctcattt 35468395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 5535921 - 5535869
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  5535921 ttttaatattaaaaaattgaaatataatgatataaagttattgaaagttgatt 5535869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 9604630 - 9604574
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||| |||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  9604630 ttttaatgttaaaaaattgaaatctaatgatataaagttattgatagttgattagtg 9604574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 5569223 - 5569278
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattag 234  Q
    ||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||    
T  5569223 tttttaatattaaaaaattcaaatgtaatgatataatgttattgatagttgattag 5569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 5978633 - 5978578
Alignment:
Q  191 aaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  5978633 aaaaattgaaatataatgatataaagttattgatagttgattagtgggtcccattt 5978578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 12734038 - 12734104
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||||||||| |||||| ||||||||   ||||||||||||||| |||||||||    
T  12734038 tttttaatattaaaaaattaaaatgtaatgatataaagttgaggatagttgattagtg-gtctcattt 12734104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 16531697 - 16531642
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    |||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||    
T  16531697 ttttaatattaaaaaattgaaatataatgatataaagttatgaatagttgattagt 16531642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 31128681 - 31128618
Alignment:
Q  183 taatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||| ||||||  |||||||||    
T  31128681 taatattaacaaattgaaatataatgatataaagttattgatagtttattagtaggtctcattt 31128618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 28540667 - 28540729
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctc 242  Q
    |||||||||||||||||| |||| |||||| |||||  ||||||||||||||||||| |||||    
T  28540667 ttttaatattaaaaaattgaaatgtaatgatataaaactattgatagttgattagtgagtctc 28540729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 37673898 - 37673833
Alignment:
Q  171 tccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||  ||||||||||||||||||| ||| || ||| ||||| ||||||||||||||||||||    
T  37673898 tccatacgcttttaatattaaaaaattagaatgtagtgatataaaattattgatagttgattagtg 37673833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 7288228 - 7288284
Alignment:
Q  190 aaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||  |||||||||    
T  7288228 aaaaaattaatatataatgatataaagttatcgatagttgattagtaagtctcattt 7288284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 10954200 - 10954144
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| |||| |||||| ||||| | ||||||||||||||||||    
T  10954200 ttttaatattaaaaaattgaaatgtaatgatataaaataattgatagttgattagtg 10954144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 10962205 - 10962149
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| |||| |||||| ||||| | ||||||||||||||||||    
T  10962205 ttttaatattaaaaaattgaaatgtaatgatataaaataattgatagttgattagtg 10962149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 13629169 - 13629113
Alignment:
Q  176 acatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    |||||||||||||||||||||| | || |||||  ||||||||||||||||||||||    
T  13629169 acatttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatt 13629113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 13729581 - 13729525
Alignment:
Q  176 acatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    |||||||||||||||||||||| | || |||||  ||||||||||||||||||||||    
T  13729581 acatttttaatattaaaaaattgatatgtaatggtataaagttattgatagttgatt 13729525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 35973515 - 35973459
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||||||| | ||||||||| |||| |||||||||| |||||||||    
T  35973515 tttttaatattaaaaaattgatatataatgatataatgttattgataattgattagt 35973459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 3628224 - 3628278
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||||||||||| | || |||||| |||||||||||| ||||||||||    
T  3628224 tttttaatattaaaaaattgagatgtaatgatataaagttattgctagttgatta 3628278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 9133799 - 9133864
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||| |||||| ||||||||||| || ||||| ||| ||||||||||||| |||||||||    
T  9133799 ttttaatattagaaaattgaaatataatgatat-aagtttttggtagttgattagtgagtctcattt 9133864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 14426248 - 14426182
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||||||||  ||||| ||||| ||||||||| |||| ||||| ||| |||||    
T  14426248 ttttaatattaaaaaattaaaattaaatgatataaaattattgataattgagtagtgagtcccattt 14426182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 28562305 - 28562371
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||| | |||||||||||||| |||| |||  ||| |||||||    
T  28562305 ttttaatattaaaaaattgaaatataataatataaagttattgattgttgcttatcgtgactcattt 28562371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 1737854 - 1737797
Alignment:
Q  182 ttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgt 239  Q
    ||||||| |||||||| |||| |||| | ||||||||||||||||||||||| |||||    
T  1737854 ttaatataaaaaaattgaaatgtaataatataaagttattgatagttgattaatgtgt 1737797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 4797360 - 4797295
Alignment:
Q  182 ttaatattaaaaaattaaaatataatgacat-aaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||||| | |||| || ||||||||||||||||||||| || ||| |||||    
T  4797360 ttaatattaaaaaattaaaatgtgatgatattaaagttattgatagttgattaatgagtcacattt 4797295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 8673728 - 8673671
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| ||||| || ||| |||||||| |||||| ||||||||||    
T  8673728 tttttaatattaaaaaatgaaaatgtagtgatataaagtttttgataattgattagtg 8673671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 38937787 - 38937840
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    ||||||||||||||||||||| || | |||| |||||||| |||||||||||||    
T  38937787 tttttaatattaaaaaattaatatgtgatgatataaagttgttgatagttgatt 38937840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 23036790 - 23036846
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| | || |||||| ||||| ||||||||||||||| ||||    
T  23036790 ttttaatattaaaaaattgatatgtaatgatataaaattattgatagttgatcagtg 23036846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 31128586 - 31128542
Alignment:
Q  268 attgaatgctcattaggtactactattgaaaatttataaatgagt 312  Q
    |||||||||| |||||||||||||||| |||| ||||||||||||    
T  31128586 attgaatgcttattaggtactactattaaaaaattataaatgagt 31128542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 40453083 - 40453127
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattga 223  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||    
T  40453083 tttttaatattaaaaaattaaaataaaatgatacaaagttattga 40453127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 350
Target Start/End: Original strand, 13079888 - 13079959
Alignment:
Q  279 attaggtactactattgaaaatttataaatgagtaacatgcacatataagactcatttaagtatccaaaaat 350  Q
    |||||||||||||||| |||| |||||||||||| | ||| |||  | ||||| ||||||||||| ||||||    
T  13079888 attaggtactactattcaaaaattataaatgagtgaaatgtacacgtgagacttatttaagtatcaaaaaat 13079959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 30714158 - 30714111
Alignment:
Q  199 aaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||| |||||| |||||||||||||||||||||||||| ||| |||||    
T  30714158 aaatgtaatgatataaagttattgatagttgattagtgagtcccattt 30714111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 30721935 - 30721888
Alignment:
Q  199 aaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||| |||||| |||||||||||||||||||||||||| ||| |||||    
T  30721935 aaatgtaatgatataaagttattgatagttgattagtgagtcccattt 30721888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 374
Target Start/End: Original strand, 9135096 - 9135201
Alignment:
Q  268 attgaatgctcattaggtactactattgaaaatttataaatgagtaacatgcacatataagactcatttaagtatccaaaaatatgtgtcttctttgtgg 367  Q
    ||||| |||| |||||||||||||||| |||| || ||||||||| | ||| |||  | |||| |||||||| ||||||||||  |||||| | |||||     
T  9135096 attgagtgcttattaggtactactatt-aaaaattgtaaatgagtgatatgtacacgtgagacccatttaagaatccaaaaatgagtgtctccattgtga 9135194  T
Q  368 atgctct 374  Q
    |||||||    
T  9135195 atgctct 9135201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 23812686 - 23812644
Alignment:
Q  194 aattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||| ||||||||| | ||||||||||||||||||||||||||    
T  23812686 aattgaaatataattatataaagttattgatagttgattagtg 23812644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 28557242 - 28557304
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctc 242  Q
    |||||||||||||||||| |||| |||| | |||||  | ||||||||||||||||| |||||    
T  28557242 ttttaatattaaaaaattgaaatgtaataatataaaagtgttgatagttgattagtgagtctc 28557304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 1155268 - 1155198
Alignment:
Q  180 ttttaatattaaaaaattaaaat----ataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||     |||||| |||||||||||| |||||||||| | ||||||||||    
T  1155268 ttttaatattaaaaaattgaaatgtaattaatgatataaagttattggtagttgattaatatgtctcattt 1155198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 376
Target Start/End: Original strand, 4326066 - 4326115
Alignment:
Q  327 agactcatttaagtatccaaaaatatgtgtcttctttgtggatgctctta 376  Q
    |||| |||||||||||||||||||| ||||||   |||||||||||||||    
T  4326066 agacccatttaagtatccaaaaataggtgtctcaattgtggatgctctta 4326115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 36316756 - 36316808
Alignment:
Q  178 atttttaatattaaaaaattaaaatataatgacataaagttattgatagttgat 231  Q
    ||||||||||||||||| || |||| |||||| ||||| |||||||||||||||    
T  36316756 atttttaatattaaaaa-ttgaaatgtaatgatataaaattattgatagttgat 36316808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 1155166 - 1155122
Alignment:
Q  268 attgaatgctcattaggtactactattgaaaatttataaatgagt 312  Q
    |||||||||| ||||| |||||||||| |||| ||||||||||||    
T  1155166 attgaatgcttattagatactactattaaaaaattataaatgagt 1155122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 4e-21; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 16461108 - 16461184
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||| |||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  16461108 aatcttaagtgagatccacatatttttaatattaaaaacttaaaatataatgatataaagttattgataattgatta 16461184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 30865886 - 30865953
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||||    
T  30865886 tttttaatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcattt 30865953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 35309110 - 35309047
Alignment:
Q  183 taatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  35309110 taatattaaaaaattaaaatataatgatataaagttattgatagttgattagtgagtcccattt 35309047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 39055157 - 39055224
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || ||||||    
T  39055157 tttttaatattaaaaaattaaaatgtaatgatataaagttattgatagttgattagtgggtttcattt 39055224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 35382491 - 35382425
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||| ||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  35382491 ttttaatatttaaaaattgaaatataatgatataaagttagtgatagttgattagtgtgtctcattt 35382425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 35332111 - 35332055
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  35332111 ttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtg 35332055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 43968777 - 43968833
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  43968777 ttttaatattaaaaaattaaaatatagtgatataaagttattgatagttgattagtg 43968833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 53779492 - 53779428
Alignment:
Q  169 gatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    |||||| || ||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  53779492 gatccacacttttttaatattaaaaaattaaaatataatgatattaagttattgatagttgatta 53779428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 49211023 - 49211089
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||| || |||||||||    
T  49211023 ttttaatattaaaaaattaaaatgtaatgatataaagttattgataattgattaatgggtctcattt 49211089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 10180764 - 10180689
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    ||||||||| | || |||||| ||||||||||||||||||| | || |||||| ||||||||||||||||||||||    
T  10180764 aatcttaagtgggacccatacctttttaatattaaaaaattgatatgtaatgatataaagttattgatagttgatt 10180689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 822507 - 822441
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| |||| || ||| |||| |||||||||||||||||| ||||||||||||    
T  822507 ttttaatattaaaaaattgaaatgtagtgatataatgttattgatagttgattaatgtgtctcattt 822441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 24030614 - 24030676
Alignment:
Q  173 catacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||| |||||||||||||||||||||||| |||| |  ||||||||||||||||||||||||    
T  24030614 catacttttttaatattaaaaaattaaaatgtaataatgtaaagttattgatagttgattagt 24030676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 23359079 - 23359164
Alignment:
Q  161 ttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||| |||||||| ||  |||||||||||||||||| |||||| || | |||||||||||||||||||||| |||  ||||||||    
T  23359079 ttaagcgagatccacactcttttaatattaaaaaattgaaatattataatataaagttattgatagttgatttgtggatctcattt 23359164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 246
Target Start/End: Original strand, 11346902 - 11347042
Alignment:
Q  107 gagaaacttttttggggtcttataagatacgcaatttcacttaa-actctaaatcttaagagagatccatacatttttaatattaaaaaattaaaatata 205  Q
    ||||||||||||||| |||||||||||  ||   |||||||||| || || |||||||||   |  ||| ||  ||||||||||| ||||||||||||||    
T  11346902 gagaaacttttttggcgtcttataagacccggggtttcacttaagaccctcaatcttaagcagggcccacactcttttaatattataaaattaaaatata 11347001  T
Q  206 atgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||| ||||| ||||| ||| ||||||| || |||||||||    
T  11347002 atgatataaaattattaataattgattaatgcgtctcattt 11347042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 22628474 - 22628530
Alignment:
Q  190 aaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||    
T  22628474 aaaaaattaaaatgtaatgatataaagttattgatagttgattagtgagtcccattt 22628530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 2574200 - 2574121
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||| | |||||| ||  |||||| ||||||||||| |||| |||||| ||||||||||| ||||||||||||||    
T  2574200 aatcttaagcgggatccacactcttttaacattaaaaaattgaaatgtaatgatataaagttattaatagttgattagtg 2574121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 8824960 - 8825014
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  8824960 ttttaatattaaaaa-ttgaaatataatgatataaagttattgatagttgattagt 8825014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 12447422 - 12447480
Alignment:
Q  188 ttaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||||| |||| ||||    
T  12447422 ttaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggtcttattt 12447480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 39629321 - 39629255
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||| ||||||| ||||| ||||||||||||| ||||||  ||||||||    
T  39629321 ttttaatattaaaaaattgaaaaataatgatataaaattattgatagttgtttagtggatctcattt 39629255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 52199799 - 52199865
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||||| ||| | ||||||||||| |||||||| ||| |||||    
T  52199799 ttttaatattaaaaaattgaaatataatgatatataattattgatagtggattagtgggtcccattt 52199865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 2322503 - 2322560
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||||||| ||| |||||| |||||| || |||||||||||||||||||||||    
T  2322503 tttttaatattaagaaagtaaaatctaatgatattaagttattgatagttgattagtg 2322560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 2396293 - 2396350
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||| || |||| || ||| ||||||||||||||||||||||||||    
T  2396293 tttttaatattaaaaacttgaaatgtactgatataaagttattgatagttgattagtg 2396350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 41916115 - 41916063
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    |||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||    
T  41916115 ttttaatattaaaaaattaaaatataatgatataaaattatttatacttgatt 41916063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 54018583 - 54018511
Alignment:
Q  174 atacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||| |||||||||||||||||| ||||||||| | ||||| ||||||| |||| ||||||| || ||||||    
T  54018583 atacagttttaatattaaaaaattgaaatataataatataaaattattgacagtttattagtgggtttcattt 54018511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 236
Target Start/End: Original strand, 44500415 - 44500545
Alignment:
Q  107 gagaaacttttttggggtcttataagatacgcaatttcacttaa-actctaaatcttaagagagatccatacatttttaatattaaaaaattaaaatata 205  Q
    |||||||||||||||||||||||||||  |   || |||||||| ||||| ||||| ||| |  |||   ||  |||||||||||||||||| |||| ||    
T  44500415 gagaaacttttttggggtcttataagaccccggatctcacttaagactctcaatctcaagcggaatctgcactattttaatattaaaaaattgaaatgta 44500514  T
Q  206 atgacataaagttattgatagttgattagtg 236  Q
    |||  |||||  |||||||||||||||||||    
T  44500515 atgttataaaactattgatagttgattagtg 44500545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 52199897 - 52199941
Alignment:
Q  268 attgaatgctcattaggtactactattgaaaatttataaatgagt 312  Q
    |||||||||| |||||||||||||||| |||| ||||||||||||    
T  52199897 attgaatgcttattaggtactactattaaaaaattataaatgagt 52199941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 26699009 - 26699068
Alignment:
Q  187 attaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||| | ||  ||||| ||||||||||| || |||||||||||||||||||||    
T  26699009 attaaaaaattgatattcaatgatataaagttattaatcgttgattagtgtgtctcattt 26699068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 28509522 - 28509468
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    |||||||||||||||||||||||| |||  | |||||||||||||| | ||||||    
T  28509522 tttttaatattaaaaaattaaaatgtaaacatataaagttattgattgatgatta 28509468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 31262545 - 31262477
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagtta---ttgatagttgattagtgtgtctcatt 245  Q
    |||||||||||||||||| |||| |||||  |||||||||   ||||||||||||||||| ||| ||||    
T  31262545 ttttaatattaaaaaattgaaatgtaatggtataaagttattgttgatagttgattagtgggtcccatt 31262477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 53847355 - 53847302
Alignment:
Q  171 tccatacatttttaatattaaaaaattaaaatataatgacataaagttattgata 225  Q
    |||| |||||||||||| |||||| |||||||||||||| ||||| |||||||||    
T  53847355 tccacacatttttaataataaaaa-ttaaaatataatgatataaaattattgata 53847302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 45832565 - 45832617
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||||||| || ||||||||||| || |||||||||||| |||||||    
T  45832565 ttttaatattaaaaatttgaaatataatgatat-aagttattgataattgatta 45832617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 377
Target Start/End: Complemental strand, 2066151 - 2066115
Alignment:
Q  341 atccaaaaatatgtgtcttctttgtggatgctcttat 377  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  2066151 atccaaaaatatatgtcttcgttgtggatgctcttat 2066115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 5036087 - 5036047
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttat 220  Q
    |||||||||||||||||| |||| |||||| ||||||||||    
T  5036087 ttttaatattaaaaaattgaaatgtaatgatataaagttat 5036047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 23607349 - 23607405
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||| |||||||||||| ||| || | || ||||||||||| |||||||||    
T  23607349 ttttaatattgaaaaattaaaatgtaaagataaaatgttattgatagctgattagtg 23607405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 36901165 - 36901099
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||  |||||||||    
T  36901165 ttttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtctcattt 36901099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 43302246 - 43302180
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  43302246 ttttaatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgggtcccattt 43302180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 46282259 - 46282192
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||| ||||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||    
T  46282259 tttttaatattcaaaaattaaaacataatgatataaaattattgatagttgattagtgggtctcattt 46282192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 19594016 - 19594098
Alignment:
Q  151 actctaaatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||| ||||||||| |||| ||| || ||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  19594016 actctcaatcttaagtgagacccacacctttttaagattaaaaaattgaaatataatgatataaagttattgatagttaatta 19594098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 23156368 - 23156302
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||||||||| || |||||||||    
T  23156368 ttttaatattaaaaaattaaaatgtagtgatataaagttattgatagttgattaatgggtctcattt 23156302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 36482134 - 36482068
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||  ||||||||    
T  36482134 ttttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtgaatctcattt 36482068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 44441415 - 44441349
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||| ||| |||||    
T  44441415 ttttaatattaaaaaattaaaatgtagtgatataaagttattgatagttgattagtgggtcccattt 44441349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 48767286 - 48767219
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||| ||||||||| ||||  ||||| |||||||||||||||||||||||||| |||||||||    
T  48767286 tttttaataataaaaaattgaaatgcaatgatataaagttattgatagttgattagtgggtctcattt 48767219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 4874995 - 4874941
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||    
T  4874995 tttttaatatttaaaaattaaaatgtaatgatataaagttattgatagttgatta 4874941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 36039044 - 36039106
Alignment:
Q  173 catacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    |||| |||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||    
T  36039044 catatatttttaatattaaaaaaatgaaatataatgatataaagttatcgatagttgattagt 36039106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 36658016 - 36657950
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||| ||||||||||||||  ||||| |||||||||||||||||||| ||| |||||    
T  36658016 ttttaatattaaaatattaaaatataatggtataaaattattgatagttgattagtgggtcccattt 36657950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 39853769 - 39853831
Alignment:
Q  184 aatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||| ||||||||||  |||||||||||||||||||||||||| ||| |||||    
T  39853769 aatattaaaaaattgaaatataatggtataaagttattgatagttgattagtgggtcccattt 39853831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 31330367 - 31330456
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||| ||||  |||||  |||||||||||||||||| |||| |||||| ||| | |||||||||||||||||||  |||||||||    
T  31330367 aatcttaagtgagacacatactattttaatattaaaaaattgaaatgtaatgatatatacttattgatagttgattagtacgtctcattt 31330456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 114 - 246
Target Start/End: Original strand, 38223904 - 38224037
Alignment:
Q  114 ttttttggggtcttataagatacgcaatttcacttaa-actctaaatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacat 212  Q
    ||||| ||||||||||||||  |  | | |||||||| ||||| ||||||||| | || ||| || ||||||||||||||||||| | || |||||| ||    
T  38223904 tttttgggggtcttataagacccagagtctcacttaagactctcaatcttaagtgggacccacacctttttaatattaaaaaatttatatgtaatgatat 38224003  T
Q  213 aaagttattgatagttgattagtgtgtctcattt 246  Q
    || |||||||||||||||||  || |||||||||    
T  38224004 aatgttattgatagttgatttttgagtctcattt 38224037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 4958212 - 4958300
Alignment:
Q  158 atcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||| | |||||| || ||||||||||||||||||| | || |||||| |||||||| ||||||||||||| ||| || ||||||    
T  4958212 atcttaagtgggatccacacctttttaatattaaaaaattgatatgtaatgatataaagttgttgatagttgatttgtgggtttcattt 4958300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 37698484 - 37698550
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||||||| || ||| |||||||| ||||||||| ||||||| || ||||||    
T  37698484 ttttaatattaaaaaattaaaatgtagtgatataaagttgttgatagtttattagtgggtttcattt 37698550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 2008578 - 2008638
Alignment:
Q  173 catacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||| ||||||||||||||||||| |||| |||||  ||||| |||||||||||||||||    
T  2008578 catacttttttaatattaaaaaattgaaatgtaatggtataaaattattgatagttgatta 2008638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 15018374 - 15018430
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||| |||||||||||| |||| | ||||||||||||||| |||||||||    
T  15018374 tttttaatattcaaaaattaaaatgtaataatataaagttattgataattgattagt 15018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 19753118 - 19753042
Alignment:
Q  151 actctaaatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagt 227  Q
    ||||| ||||||||| |||| ||| || ||||||| ||||||||||| |||| |||||| ||||| |||||||||||    
T  19753118 actctcaatcttaagtgagacccacacctttttaagattaaaaaattgaaatgtaatgatataaaattattgatagt 19753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 25324651 - 25324573
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||| |||| ||| || |||||||||||||||||||   ||||||||| ||||| |||||||||| |||||||||    
T  25324651 aatcttaagtgagacccacac-tttttaatattaaaaaattgttatataatgatataaaattattgatagctgattagtg 25324573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 29914528 - 29914477
Alignment:
Q  183 taatattaaaaaattaaaatataatgacataaagttattgatagttgattag 234  Q
    ||||||||||||||| |||| |||| | ||||||||||||||||||||||||    
T  29914528 taatattaaaaaattgaaatgtaataatataaagttattgatagttgattag 29914477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 36656737 - 36656670
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||| | || |||||| ||||||||||| ||||||||||  || |||||||||    
T  36656737 tttttaatattaaaaaattgatatgtaatgatataaagttattaatagttgatttatgggtctcattt 36656670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 47841551 - 47841484
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||| | || | |||  |||||||||||||||||||||| ||| |||||||||    
T  47841551 tttttaatattaaaaaattgatatgtgatggtataaagttattgatagttgatttgtgagtctcattt 47841484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 2888137 - 2888179
Alignment:
Q  177 catttttaatattaaaaaattaaaatataatgacataaagtta 219  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  2888137 catttttaatattaaaaaattgaaatataatgatataaagtta 2888179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 5513975 - 5513909
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||| |||||||| |||| |||| | |||||||||||||| || |||||||| |||||||||    
T  5513975 ttttaatataaaaaaattgaaatgtaattatataaagttattgatggtcgattagtgagtctcattt 5513909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 44441587 - 44441653
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| || | |||||| ||  |||| ||||||||||||||||| |||||||||    
T  44441587 ttttaatattaaaaaattgaagtgtaatgatatccagttgttgatagttgattagtgggtctcattt 44441653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 6068092 - 6068149
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||||||||||||| |||| |||||| | ||| |||||| |||||||||||||    
T  6068092 tttttaatattaaaaaattgaaatgtaatgatagaaaattattggtagttgattagtg 6068149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 13057864 - 13057921
Alignment:
Q  179 tttttaatattaaaaaatta-aaatataatgacataaagttattgatagttgattagt 235  Q
    |||||||||||||||||||  |||| | |||| |||||||||||||||||||||||||    
T  13057864 tttttaatattaaaaaatttgaaatgttatgatataaagttattgatagttgattagt 13057921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 43095504 - 43095561
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||||||||||||| ||||||||||| || ||||||| |||| || |||||||    
T  43095504 tttttaatattaaaaaattgaaatataatgatatgaagttatcgataattaattagtg 43095561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 3373315 - 3373275
Alignment:
Q  181 tttaatattaaaaaattaaaatataatgacataaagttatt 221  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  3373315 tttaatattaaaaaattaaaatataataatataaagttatt 3373275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 21122111 - 21122071
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagtta 219  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  21122111 tttttaatattaaaaaattaaaatataataatataaagtta 21122071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 31027263 - 31027322
Alignment:
Q  177 catttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||| || ||||||| || ||||||| |||| |||||||||||||||| |||||||||    
T  31027263 cattttaaagattaaaatataaaaatattatgatataaagttattgatagatgattagtg 31027322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 41172619 - 41172572
Alignment:
Q  199 aaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||| |||||| ||||||||| ||||| ||||||||||||||||||||    
T  41172619 aaatgtaatgatataaagttaatgataattgattagtgtgtctcattt 41172572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 27334367 - 27334421
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||||||| ||| |||| |||||| ||| |||||||||||| ||||||    
T  27334367 tttttaatattaaaatattgaaatgtaatgatatagagttattgatagatgatta 27334421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 32724226 - 32724272
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgata 225  Q
    ||||||||||||||||||| | || |||||| |||||||||||||||    
T  32724226 tttttaatattaaaaaattgatatgtaatgatataaagttattgata 32724272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 46748155 - 46748101
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattag 234  Q
    ||||||||||||| |||| | || |||||| ||||||||||||| ||||||||||    
T  46748155 ttttaatattaaataattgatatgtaatgatataaagttattgacagttgattag 46748101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 378
Target Start/End: Original strand, 32724394 - 32724439
Alignment:
Q  333 atttaagtatccaaaaatatgtgtcttctttgtggatgctcttatt 378  Q
    ||||||||| ||||||||| |||||| | |||||||||||||||||    
T  32724394 atttaagtacccaaaaataggtgtctccattgtggatgctcttatt 32724439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 2375544 - 2375610
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||    
T  2375544 ttttaatattaaaaaattaaaatataattatataaagttattgatagttgattagtgggtcccattt 2375610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 13420836 - 13420770
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| ||| |||||    
T  13420836 ttttaatattaaaaaattgaaatataattatataaagttattgatagttgattagtgagtcccattt 13420770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 1309890 - 1309833
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgt 237  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  1309890 ttttaatattaaaaaattaaaatataatgatataaaattattgataattgattagtgt 1309833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 13486580 - 13486636
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||    
T  13486580 ttttaatattaaaaaattgaaatataatgatataaagttattgatagctgattagtg 13486636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 14642344 - 14642291
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  14642344 tttttaatattaaaaa-ttaaaatataatgatataaagttattgatagttgatta 14642291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 6761497 - 6761440
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  6761497 tttttaatattaaaaaattaaaatgtaatgatataaagttgttgacagttgattagtg 6761440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 42951862 - 42951794
Alignment:
Q  178 atttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||||| |||| || ||| ||||| ||||||||| |||||||||| |||||||||    
T  42951862 atttttaatattaaaaaattgaaatgtagtgatataaaattattgataattgattagtgggtctcattt 42951794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 12593121 - 12593188
Alignment:
Q  180 ttttaatattaaaaaa-ttaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||| |||||||||  |||||||||    
T  12593121 ttttaatattaaaaaagttaaaatgtaatgatataaagttattgataattgattagttggtctcattt 12593188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 20420163 - 20420220
Alignment:
Q  178 atttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    |||| ||||| ||||||||| | ||||||||| |||||||||||||||||||||||||    
T  20420163 atttctaataataaaaaattgatatataatgatataaagttattgatagttgattagt 20420220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 7293042 - 7293098
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| |||| |||||| |||| ||||||||||||| |||||||    
T  7293042 ttttaatattaaaaaattgaaatgtaatgatataatgttattgatagttaattagtg 7293098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 22579668 - 22579715
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatag 226  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||    
T  22579668 tttttaatattaaaaaattaaaatgtaattatataaagttattgatag 22579715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 18396646 - 18396580
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||  ||| ||||||||||| |||||||||| ||| ||| |||||    
T  18396646 ttttaatattaaaaaattgaaatattgtgatataaagttatttatagttgattggtgggtcccattt 18396580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 26675607 - 26675541
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| || | | |||| ||||||||||||||| |||||||||| |||| ||||    
T  26675607 ttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaattt 26675541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 26947215 - 26947149
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| || | | |||| ||||||||||||||| |||||||||| |||| ||||    
T  26947215 ttttaatattaaaaaattgaagtgtgatgatataaagttattgatatttgattagtgggtctaattt 26947149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 34382601 - 34382547
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||||||| |||||||| |||||| ||||| |||||||||| ||||||    
T  34382601 tttttaatattaaaatattaaaatgtaatgatataaaattattgatagatgatta 34382547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 35463354 - 35463304
Alignment:
Q  182 ttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    |||||||||||||||| ||| ||||||| ||||| ||||||||||||||||    
T  35463354 ttaatattaaaaaattgaaacataatgatataaaattattgatagttgatt 35463304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 35982138 - 35982187
Alignment:
Q  178 atttttaatattaaaaaattaaaatataatgacataaagttattgatagt 227  Q
    |||||||||||||||||||| ||||||||| | ||||||||||| |||||    
T  35982138 atttttaatattaaaaaattgaaatataattatataaagttatttatagt 35982187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 15468250 - 15468194
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| |||| |||||| ||||| |||||||||  |||||||||    
T  15468250 ttttaatattaaaaaattgaaatttaatgatataaaattattgataaatgattagtg 15468194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 3558767 - 3558834
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||| | || |||| |  |||||||||||||||||||||| || ||| |||||    
T  3558767 tttttaatattaaaaaattgatatctaataatttaaagttattgatagttgattaatgggtcccattt 3558834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 11200732 - 11200783
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgat 231  Q
    |||||||||||||||||||| || |||| | ||||| |||||||||||||||    
T  11200732 ttttaatattaaaaaattaatatgtaataatataaaattattgatagttgat 11200783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 1666893 - 1666847
Alignment:
Q  187 attaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||| | |||||| || |||||||||||||||||||||||    
T  1666893 attaaaaaattgagatataacgatataaagttattgatagttgatta 1666847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 29558344 - 29558386
Alignment:
Q  191 aaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    |||||||||||| |||||| ||||| |||||||||||||||||    
T  29558344 aaaaattaaaatgtaatgatataaaattattgatagttgatta 29558386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 26675492 - 26675419
Alignment:
Q  285 tactactattgaaaatttataaatgagtaacatgcacatataagactcatttaagtatccaaaaatatgtgtct 358  Q
    |||||||||| |||| |||||||||||| |  || |||||| |||| |||||| ||| |||||||| |||||||    
T  26675492 tactactattaaaaaattataaatgagtgatgtgtacatatgagacccatttaggtacccaaaaatgtgtgtct 26675419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 358
Target Start/End: Complemental strand, 26947100 - 26947027
Alignment:
Q  285 tactactattgaaaatttataaatgagtaacatgcacatataagactcatttaagtatccaaaaatatgtgtct 358  Q
    |||||||||| |||| |||||||||||| |  || |||||| |||| |||||| ||| |||||||| |||||||    
T  26947100 tactactattaaaaaattataaatgagtgatgtgtacatatgagacccatttaggtacccaaaaatgtgtgtct 26947027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 28998125 - 28998064
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtct 241  Q
    ||||||||||||| ||  ||||| |||||| ||||||||||| |||| ||||||||| ||||    
T  28998125 ttttaatattaaataaacaaaatgtaatgatataaagttatttatagatgattagtgggtct 28998064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 41521013 - 41520924
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||| | || ||| || ||||||||| ||||||||| | || |||||  |||||||||||||||||| ||| ||| ||| |||||    
T  41521013 aatcttaagtgggacccacacctttttaatagtaaaaaattgatatgtaatggtataaagttattgatagttaatttgtgggtcccattt 41520924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 9e-19; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 32658553 - 32658497
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  32658553 ttttaatattaaaaaattaaaatatactgatataaagttattgatagttgattagtg 32658497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 25099074 - 25099128
Alignment:
Q  181 tttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  25099074 tttaatattaaaaaattaaaatataatgatataaaattattgatagttgattagt 25099128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 387697 - 387787
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaa-tataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||| | |||||| |  |||| |||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||| ||||    
T  387697 aatcttaagtgggatccacattttttaaatattaaaaaattaaaaatataataatataaagttattgatagttgattagtgggtcttattt 387787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 5002498 - 5002432
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||| ||||||| ||||||||| | |||||||||||||||||||||||||| ||| |||||    
T  5002498 ttttaatatttaaaaattgaaatataataatataaagttattgatagttgattagtgggtcccattt 5002432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 9491884 - 9491836
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagt 227  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  9491884 tttttaatattaaaaaattaaaatgtaatgatataaagttattgatagt 9491836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 21941059 - 21941003
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||| |||||||    
T  21941059 ttttaatattaaaaaattgaaatatagtaacataaagttattgatagtttattagtg 21941003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 22281895 - 22281839
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  22281895 ttttaatgttaaaaaattgaaatataatgatataaagttattgatggttgattagtg 22281839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 7694074 - 7693995
Alignment:
Q  157 aatcttaagagagatccatacatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||||| || | | || ||||||||||||||||||| |||| || ||| || |||||||||||||||||||||||    
T  7694074 aatcttaagagggacctacacttttttaatattaaaaaattgaaatgtattgatatgaagttattgatagttgattagtg 7693995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 6988172 - 6988227
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||||||||||| | |||| ||||| ||||||||||||| |||||    
T  6988172 ttttaatattaaaaaattaaaatgtgatgatataaaattattgatagttgtttagt 6988227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 32977500 - 32977434
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||| |||||||||| |||| || ||  |||||||||||||||||||||||||| ||| |||||    
T  32977500 ttttaatgttaaaaaattgaaatgtagtggtataaagttattgatagttgattagtgggtcccattt 32977434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 18804305 - 18804249
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||| ||||| |||| |||| | ||||| |||||||||||||||||||    
T  18804305 tttttaatattaataaattgaaatgtaataatataaaattattgatagttgattagt 18804249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 4e-18; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 6459074 - 6459141
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||  |||||||||    
T  6459074 tttttaatattaaaaaattaaaatataatgatagaaaattattgatagttgattagtaagtctcattt 6459141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 5038707 - 5038763
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||    
T  5038707 ttttaatattaaaaaattaaaatataataatataaaattattgatagttgattagtg 5038763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 34234879 - 34234946
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||| |||||||||| |||| ||||    
T  34234879 tttttaatattaaaaaattgaaatgtaatgatataaagttattgataattgattagtgggtctaattt 34234946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 44887368 - 44887302
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||  ||||||||    
T  44887368 ttttaatattaaaaaattgaaatataatgatataaatttattgatagttgattattggatctcattt 44887302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 11921843 - 11921995
Alignment:
Q  85 acctattagatac-tccattgaagagaaacttttttggggtcttataagatacgcaatttcacttaa-actctaaatcttaagagagatccatacatttt 182  Q
    ||||||||| ||| |||||||  ||||||||||||| |||||||||||||  ||   | | |||||| || |  ||||||||| | ||  || ||| |||    
T  11921843 acctattaggtacctccattggggagaaacttttttagggtcttataagacccggggtcttacttaagacccccaatcttaagcgggactcacacacttt 11921942  T
Q  183 taatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    |||||||||||||||| ||| |||||| |||||||||||| ||||||||||||    
T  11921943 taatattaaaaaattagaatctaatgatataaagttattggtagttgattagt 11921995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 32887730 - 32887674
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||||||||||||||||| |||| | ||||||||||| ||||||||||||||    
T  32887730 ttttaatattaaaaaattaaaatgtaataatataaagttatttatagttgattagtg 32887674  T

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Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 34821011 - 34820955
Alignment:
Q  176 acatttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    |||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||    
T  34821011 acatttgtaatattaaaaaattaaaatgtaatgatataaagttactgatagttgatt 34820955  T

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Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 13022853 - 13022786
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    ||||||||||||||||||| |||| |||| | ||||| |||||||||||||||||||| || ||||||    
T  13022853 tttttaatattaaaaaattgaaatgtaataatataaatttattgatagttgattagtgagtttcattt 13022786  T

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Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 40999675 - 40999730
Alignment:
Q  181 tttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||    
T  40999675 tttaatattaaaagattgaaatataatgatataaagttattgatggttgattagtg 40999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 36887697 - 36887631
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||||| ||||  ||||| ||||| ||||||||||||||||||||  ||||||||    
T  36887697 ttttaatattaaaaaattgaaatgcaatgatataaatttattgatagttgattagtggatctcattt 36887631  T

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Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 99 - 232
Target Start/End: Complemental strand, 41068998 - 41068866
Alignment:
Q  99 ccattgaagagaaacttttttggggtcttataagatacgcaatttcacttaa-actctaaatcttaagagagatccatacatttttaatattaaaaaatt 197  Q
    |||||| |||||||||||||||| |||||||||||  |    | |||||||| ||||| ||| ||||| | || ||| || |||||| ||| ||||||||    
T  41068998 ccattggagagaaacttttttggagtcttataagactcagggtctcacttaagactctcaattttaagtgggacccacactttttta-tat-aaaaaatt 41068901  T
Q  198 aaaatataatgacataaagttattgatagttgatt 232  Q
     ||||||||||| ||||||||||||||||||||||    
T  41068900 gaaatataatgatataaagttattgatagttgatt 41068866  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 26312470 - 26312523
Alignment:
Q  183 taatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    ||||||||||||||  |||| ||||||||||||||||||| |||||||||||||    
T  26312470 taatattaaaaaatagaaatgtaatgacataaagttattggtagttgattagtg 26312523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 376
Target Start/End: Original strand, 15269291 - 15269399
Alignment:
Q  268 attgaatgctcattaggtactactattgaaaatttataaatgagtaacatgcacatataagactcatttaagtatccaaaaatatgtgtcttctttgtgg 367  Q
    ||||||| || |||||| ||||||||| |||| ||||||||||||||  || |||| | |||| |||||||||| | ||||||  || ||| | ||||||    
T  15269291 attgaatacttattaggcactactattaaaaaattataaatgagtaatgtgtacatgtgagacccatttaagtaccgaaaaatgggtatctccattgtgg 15269390  T
Q  368 atgctctta 376  Q
    |||||||||    
T  15269391 atgctctta 15269399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 45135758 - 45135810
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    ||||||||||||| || | ||||||||||| ||||||||||||||||||||||    
T  45135758 ttttaatattaaataactgaaatataatgatataaagttattgatagttgatt 45135810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 6710989 - 6710946
Alignment:
Q  190 aaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  6710989 aaaaaattaaaatgtaatgatataaagttattgatagttgatta 6710946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 376
Target Start/End: Original strand, 11922036 - 11922146
Alignment:
Q  266 gaattgaatgctcattaggtactactattgaaaatttataaatgagtaacatgcacatataagactcatttaagtatccaaaaatatgtgtcttctttgt 365  Q
    ||||||| ||||  ||||||||||||||| |||| ||||||||||||||  || |||  | |||| ||||||||||   ||||||  |||||| | ||||    
T  11922036 gaattgagtgctttttaggtactactattaaaaaattataaatgagtaatgtgtacacgtgagacccatttaagtaattaaaaatgagtgtctccattgt 11922135  T
Q  366 ggatgctctta 376  Q
    |||||||||||    
T  11922136 ggatgctctta 11922146  T

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Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 37648422 - 37648364
Alignment:
Q  176 acatttttaatattaaaaaa-ttaaaatataatgacataaagttattgatagttgatta 233  Q
    |||||||||||||||||||| ||||||||| |||| ||||| |||||||| ||||||||    
T  37648422 acatttttaatattaaaaaaattaaaatattatgatataaaattattgatggttgatta 37648364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 16118041 - 16117988
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    ||||||||||||||||||    ||||||||| ||||||||||||||||||||||    
T  16118041 tttttaatattaaaaaatggttatataatgatataaagttattgatagttgatt 16117988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 26297112 - 26297164
Alignment:
Q  181 tttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||||||||| |||| |  ||| |||||||||||||||||||||||    
T  26297112 tttaatattaaaaaattgaaatgtggtgatataaagttattgatagttgatta 26297164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 65522 - 65455
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||| |||||||| |||| |||||| | ||| ||||||||||||||||| ||  ||||||||    
T  65522 tttttaatataaaaaaattgaaatgtaatgatacaaacttattgatagttgattaatggttctcattt 65455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 34375045 - 34375111
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcattt 246  Q
    |||||||||||||||| || |||| |||| | ||||||||||||||||||||||| || ||| |||||    
T  34375045 tttttaatattaaaaa-ttgaaatgtaataatataaagttattgatagttgattaatgggtcccattt 34375111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 6562937 - 6562986
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttg 229  Q
    |||||||||||||||| || |||| |||||| |||||||||||||||||||    
T  6562937 tttttaatattaaaaa-ttgaaatgtaatgatataaagttattgatagttg 6562986  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 312
Target Start/End: Original strand, 26312563 - 26312609
Alignment:
Q  266 gaattgaatgctcattaggtactactattgaaaatttataaatgagt 312  Q
    ||||||| |||| |||||||||||||||| |||| ||||||||||||    
T  26312563 gaattgagtgcttattaggtactactattaaaaaattataaatgagt 26312609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 3668837 - 3668890
Alignment:
Q  183 taatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||||||||||||||  |||||| ||||| |||| ||||||| |||||||    
T  3668837 taatattaaaaaattaaaacgtaatgatataaaattatcgatagttaattagtg 3668890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 3949109 - 3949044
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtctcat 244  Q
    ||||||| |||| |||||| |||| |||||| ||||||||||||||| |||| ||| | |||||||    
T  3949109 tttttaacattataaaattgaaatgtaatgatataaagttattgataattgactagagagtctcat 3949044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 16341932 - 16341985
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatt 232  Q
    |||||||||||||||||||   || ||| || ||||||||||||||||||||||    
T  16341932 tttttaatattaaaaaattgttatgtaaagatataaagttattgatagttgatt 16341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 9583138 - 9583194
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtg 236  Q
    |||||||  ||||||||| |||||||||||  |||||||||||| | ||||||||||    
T  9583138 ttttaatgataaaaaattgaaatataatgatgtaaagttattgacaattgattagtg 9583194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 44583493 - 44583437
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||||||| |||| | |||| ||||| |||| |||| |||||||||    
T  44583493 tttttaatattaaaaaattgaaatgtgatgatataaatttatggatatttgattagt 44583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 3012 - 2951
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagtgtgtc 240  Q
    ||||| ||||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||    
T  3012 ttttttatattaaaaaattgaaatataatgatataaaattattgatagtggattagtgtgtc 2951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 6189 - 6133
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||||||| | ||||||| | ||||| |||||||||||||||||||    
T  6189 tttttaatattaaaaaattgatatataataatataaaattattgatagttgattagt 6133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 6207 - 6151
Alignment:
Q  179 tttttaatattaaaaaattaaaatataatgacataaagttattgatagttgattagt 235  Q
    ||||||||||||||||||| | ||||||| | ||||| |||||||||||||||||||    
T  6207 tttttaatattaaaaaattgatatataataatataaaattattgatagttgattagt 6151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 31929 - 31877
Alignment:
Q  180 ttttaatattaaaaaattaaaatataatgacataaagttattgatagttgatta 233  Q
    ||||||||||||||| ||||| |||||| | |||||||||||| ||||||||||    
T  31929 ttttaatattaaaaatttaaa-tataatcatataaagttattgttagttgatta 31877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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