View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5626_high_7 (Length: 374)
Name: NF5626_high_7
Description: NF5626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5626_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 10 - 355
Target Start/End: Original strand, 1104981 - 1105326
Alignment:
| Q |
10 |
aagaatatgtgattgggtttaatataaccatgtaaaatcgatttgtaagatgaggattgtgtacgtcctcatgttcagcactattgagtttaatgcatag |
109 |
Q |
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| T |
1104981 |
aagaatatgtgattgggtttaatataaccatgtaaaatcgatttgtaagatgaggattgtgtacgtcctcatgctcaacactattgagtttaatgcgtag |
1105080 |
T |
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| Q |
110 |
atataaatgttagatgacttgatagcaaaaacctaagaataagtggtccaacaaatctcagaatagactgatcttatatcattttaaaatttgcaattta |
209 |
Q |
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| T |
1105081 |
atataaatgttagatgacttgatagcagaaacctaataataagtggtccaacaaatcttagagtagactgatctgatatcattttagaatttgcaaattg |
1105180 |
T |
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| Q |
210 |
atctaacacaaccccttaaaatcgactaataaagtcaagatttgtcattataaatatttgttcgaattatctacgagactcataacatcagcaaggtgat |
309 |
Q |
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||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
1105181 |
gtctaacacaacccctaaaaatcgactaggaaagttaagatttgtcattataaatatttgttcgaatgatctacgagactcataacatcagcaaggtgat |
1105280 |
T |
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| Q |
310 |
tcatgtgtacacatctaaatggtgtcttcctcaaacatccacttgc |
355 |
Q |
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||||||||||||| ||||| |||||||||||||||||||||||||| |
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| T |
1105281 |
tcatgtgtacacacctaaaaggtgtcttcctcaaacatccacttgc |
1105326 |
T |
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