View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5627_low_4 (Length: 231)
Name: NF5627_low_4
Description: NF5627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5627_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 44033478 - 44033271
Alignment:
| Q |
1 |
taccgctaaatgacacttcataaacataagcattatttgtatttagcttaacgtataacaatgtattgagaaaaattaaatctcacattcaacaaatatg |
100 |
Q |
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| T |
44033478 |
taccgctaaacgacacctcataaacataagcattacttgtatttagcttaacgtataacaatgtattgagaaaaattaaatctcacattgaacaaatatg |
44033379 |
T |
|
| Q |
101 |
tggtctaaaaatatatcaataaaatattaactttataaagttagctcaacccaaaggtaaagttttaacaaataaataaaaagattaatatatgacgcaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
44033378 |
tggtctaaaaatatatcaataaaatattaactttataaagttagctcaacccaaaggtaaagttttaacaaataaataaaaagattaatatatgatgcaa |
44033279 |
T |
|
| Q |
201 |
taatgagg |
208 |
Q |
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|||||||| |
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| T |
44033278 |
taatgagg |
44033271 |
T |
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