View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5628-Insertion-16 (Length: 233)
Name: NF5628-Insertion-16
Description: NF5628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5628-Insertion-16 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 233
Target Start/End: Complemental strand, 54543171 - 54542953
Alignment:
| Q |
15 |
tctggaaatgttctcacataacattgaaacattgctatcgtatcactgcttgactggtatacatctcatattttctttgctcgaaatacatctctgtaat |
114 |
Q |
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| T |
54543171 |
tctggaaatgttcacacataacattgaaacattgctatcgtatcactgcttgactggtatacatctcatattttctttgctccaaatacatctatgtaat |
54543072 |
T |
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| Q |
115 |
agcaagaccttagtaacttttctgcttttgttgttttaataggtcctttgatgaataattcggatgaagtacaggtcatacataacaaaggaggtgttaa |
214 |
Q |
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| T |
54543071 |
agcaagaccttagtaacttttctgcttttgttgttttaataggtcctttgataaataattcggatgaagtacatgtcatacataacaaaggaggtgttaa |
54542972 |
T |
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| Q |
215 |
gaggtcttctaccaccaag |
233 |
Q |
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| T |
54542971 |
gaggtcttctaccaccaag |
54542953 |
T |
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