View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5628_low_12 (Length: 238)

Name: NF5628_low_12
Description: NF5628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5628_low_12
NF5628_low_12
[»] chr8 (30 HSPs)
chr8 (80-204)||(36639545-36639669)
chr8 (1-81)||(3404701-3404782)
chr8 (1-80)||(6691-6771)
chr8 (1-81)||(1942161-1942241)
chr8 (1-82)||(34272385-34272468)
chr8 (1-82)||(36906063-36906140)
chr8 (1-75)||(4734624-4734694)
chr8 (1-75)||(37659659-37659734)
chr8 (1-80)||(43733248-43733328)
chr8 (1-75)||(36103018-36103093)
chr8 (6-81)||(79746-79823)
chr8 (1-73)||(25033260-25033333)
chr8 (1-53)||(34304616-34304669)
chr8 (1-52)||(13865219-13865271)
chr8 (3-82)||(26772771-26772851)
chr8 (1-52)||(31297475-31297527)
chr8 (1-75)||(2474894-2474964)
chr8 (3-81)||(21173987-21174066)
chr8 (8-75)||(34349601-34349670)
chr8 (6-75)||(31149802-31149872)
chr8 (36-81)||(34148398-34148443)
chr8 (8-75)||(3635611-3635679)
chr8 (45-81)||(13227942-13227978)
chr8 (7-60)||(12319156-12319210)
chr8 (1-75)||(31598547-31598621)
chr8 (45-82)||(1941867-1941904)
chr8 (36-81)||(36906407-36906452)
chr8 (9-52)||(1840341-1840385)
chr8 (45-81)||(4074857-4074893)
chr8 (46-82)||(39418259-39418295)
[»] chr4 (47 HSPs)
chr4 (1-82)||(7182319-7182401)
chr4 (1-82)||(41363940-41364022)
chr4 (1-83)||(38317357-38317440)
chr4 (1-81)||(38365901-38365982)
chr4 (1-81)||(32948645-32948726)
chr4 (1-75)||(16535569-16535644)
chr4 (1-75)||(52594752-52594827)
chr4 (1-74)||(31529898-31529972)
chr4 (1-82)||(50641928-50642008)
chr4 (1-81)||(904074-904150)
chr4 (1-75)||(13270401-13270471)
chr4 (1-82)||(54806346-54806428)
chr4 (1-69)||(3127139-3127208)
chr4 (9-81)||(31187230-31187303)
chr4 (6-75)||(35959076-35959144)
chr4 (1-82)||(17622591-17622669)
chr4 (6-81)||(46177060-46177136)
chr4 (1-81)||(24279786-24279867)
chr4 (1-52)||(48830943-48830995)
chr4 (1-58)||(13269848-13269906)
chr4 (29-75)||(18964885-18964931)
chr4 (1-82)||(32060560-32060642)
chr4 (3-75)||(16318495-16318568)
chr4 (45-81)||(45899263-45899299)
chr4 (35-82)||(21357979-21358026)
chr4 (1-57)||(21296233-21296290)
chr4 (1-41)||(37756841-37756882)
chr4 (3-75)||(47669691-47669759)
chr4 (6-82)||(52636632-52636709)
chr4 (6-81)||(33500392-33500468)
chr4 (8-75)||(16422797-16422864)
chr4 (1-43)||(20533837-20533880)
chr4 (35-82)||(22845049-22845096)
chr4 (35-82)||(31340658-31340705)
chr4 (2-52)||(32651392-32651443)
chr4 (36-82)||(20534145-20534191)
chr4 (47-81)||(41844314-41844348)
chr4 (1-75)||(42650521-42650593)
chr4 (6-75)||(49668236-49668306)
chr4 (5-57)||(30765598-30765651)
chr4 (36-81)||(32648822-32648867)
chr4 (45-82)||(41844662-41844699)
chr4 (7-51)||(45022853-45022898)
chr4 (6-82)||(45823426-45823503)
chr4 (47-80)||(49936726-49936759)
chr4 (6-81)||(12708967-12709043)
chr4 (45-81)||(22845383-22845419)
[»] chr7 (41 HSPs)
chr7 (1-82)||(3658639-3658721)
chr7 (1-82)||(5968171-5968252)
chr7 (1-82)||(7667292-7667375)
chr7 (1-82)||(36747167-36747250)
chr7 (1-81)||(33406760-33406841)
chr7 (1-66)||(46745714-46745780)
chr7 (1-75)||(34652179-34652254)
chr7 (1-58)||(3571887-3571945)
chr7 (1-81)||(33113769-33113845)
chr7 (1-75)||(47276130-47276206)
chr7 (1-75)||(44719971-44720045)
chr7 (3-75)||(15749079-15749152)
chr7 (1-81)||(33810340-33810421)
chr7 (6-82)||(38505467-38505544)
chr7 (1-52)||(23325729-23325781)
chr7 (17-82)||(42854119-42854184)
chr7 (1-48)||(23620921-23620969)
chr7 (1-82)||(43778704-43778791)
chr7 (6-51)||(42113090-42113136)
chr7 (8-73)||(43188755-43188816)
chr7 (6-69)||(41002383-41002445)
chr7 (2-57)||(12863744-12863800)
chr7 (1-48)||(19644206-19644254)
chr7 (5-75)||(19791565-19791641)
chr7 (30-82)||(42622201-42622253)
chr7 (13-82)||(6746706-6746776)
chr7 (6-75)||(32650513-32650583)
chr7 (45-75)||(45510574-45510604)
chr7 (1-81)||(7391535-7391616)
chr7 (36-81)||(7666982-7667027)
chr7 (36-81)||(33872218-33872263)
chr7 (45-82)||(34651870-34651907)
chr7 (36-73)||(35902075-35902112)
chr7 (36-81)||(38236010-38236055)
chr7 (36-81)||(44690081-44690126)
chr7 (45-81)||(23465818-23465854)
chr7 (1-50)||(28437670-28437721)
chr7 (45-81)||(38505162-38505198)
chr7 (50-82)||(41471675-41471707)
chr7 (50-82)||(42112775-42112807)
chr7 (6-81)||(44643657-44643733)
[»] chr6 (15 HSPs)
chr6 (1-82)||(2365725-2365807)
chr6 (1-75)||(26481255-26481330)
chr6 (6-81)||(26713735-26713811)
chr6 (1-57)||(26574523-26574580)
chr6 (1-82)||(24734758-24734835)
chr6 (3-75)||(1567159-1567232)
chr6 (2-82)||(31345499-31345580)
chr6 (7-82)||(34914498-34914574)
chr6 (1-48)||(1029198-1029246)
chr6 (1-52)||(5825234-5825286)
chr6 (1-52)||(29241961-29242013)
chr6 (36-75)||(24735100-24735139)
chr6 (1-74)||(34731298-34731372)
chr6 (45-82)||(28551724-28551761)
chr6 (45-82)||(29241650-29241687)
[»] chr5 (33 HSPs)
chr5 (1-81)||(35700932-35701013)
chr5 (1-75)||(27480298-27480373)
chr5 (1-81)||(10295354-10295436)
chr5 (1-58)||(38928830-38928888)
chr5 (3-81)||(35683603-35683682)
chr5 (1-82)||(32760633-32760710)
chr5 (3-81)||(5772849-5772928)
chr5 (6-83)||(10437856-10437934)
chr5 (1-52)||(1658078-1658130)
chr5 (1-52)||(2020882-2020934)
chr5 (1-52)||(4649115-4649167)
chr5 (45-81)||(12229636-12229672)
chr5 (1-52)||(17092799-17092851)
chr5 (1-80)||(35704583-35704663)
chr5 (1-52)||(38302481-38302533)
chr5 (1-52)||(41694878-41694930)
chr5 (9-81)||(35708888-35708962)
chr5 (1-75)||(41638233-41638308)
chr5 (2-58)||(1176061-1176118)
chr5 (8-57)||(9096213-9096262)
chr5 (6-82)||(18670904-18670981)
chr5 (1-56)||(15058575-15058631)
chr5 (47-83)||(38289539-38289575)
chr5 (8-81)||(37508527-37508598)
chr5 (5-81)||(43496379-43496457)
chr5 (6-81)||(9684913-9684990)
chr5 (36-82)||(10295704-10295750)
chr5 (5-68)||(41923062-41923127)
chr5 (48-81)||(5696702-5696735)
chr5 (45-82)||(25598586-25598623)
chr5 (45-82)||(38120012-38120049)
chr5 (8-82)||(39649441-39649517)
chr5 (7-82)||(32824534-32824610)
[»] chr3 (55 HSPs)
chr3 (1-81)||(34306019-34306100)
chr3 (1-82)||(30132014-30132095)
chr3 (1-81)||(47789574-47789655)
chr3 (1-62)||(17642481-17642543)
chr3 (1-82)||(42583399-42583476)
chr3 (1-82)||(45555508-45555586)
chr3 (6-81)||(35282961-35283036)
chr3 (1-71)||(49860718-49860789)
chr3 (1-82)||(46017099-46017181)
chr3 (1-82)||(53620160-53620242)
chr3 (1-80)||(47714800-47714885)
chr3 (1-52)||(36796324-36796376)
chr3 (1-52)||(41962103-41962155)
chr3 (6-81)||(49183564-49183640)
chr3 (8-82)||(2420536-2420611)
chr3 (1-75)||(46312549-46312619)
chr3 (1-43)||(23163435-23163477)
chr3 (1-82)||(32858700-32858784)
chr3 (1-82)||(29623107-29623191)
chr3 (15-81)||(38592852-38592916)
chr3 (1-52)||(3043246-3043298)
chr3 (1-52)||(33982847-33982899)
chr3 (1-52)||(43237192-43237244)
chr3 (1-81)||(3706977-3707059)
chr3 (11-81)||(39499067-39499138)
chr3 (6-75)||(3537086-3537156)
chr3 (3-52)||(43007626-43007676)
chr3 (36-82)||(52620652-52620698)
chr3 (1-81)||(1133052-1133135)
chr3 (36-81)||(30121340-30121385)
chr3 (45-82)||(32859066-32859103)
chr3 (1-57)||(38526049-38526106)
chr3 (1-75)||(44412282-44412353)
chr3 (1-52)||(55439485-55439537)
chr3 (1-75)||(31178374-31178448)
chr3 (1-75)||(49683129-49683199)
chr3 (3-52)||(24242222-24242272)
chr3 (3-52)||(25428571-25428621)
chr3 (3-52)||(38515152-38515202)
chr3 (36-82)||(39499416-39499462)
chr3 (36-82)||(47789263-47789309)
chr3 (45-83)||(55439812-55439850)
chr3 (45-82)||(3537433-3537470)
chr3 (45-82)||(17642441-17642478)
chr3 (45-82)||(38456486-38456523)
chr3 (6-82)||(39115090-39115169)
chr3 (36-81)||(44411972-44412017)
chr3 (1-57)||(47434446-47434503)
chr3 (36-81)||(49861054-49861099)
chr3 (50-82)||(35283319-35283351)
chr3 (6-81)||(40119020-40119093)
chr3 (6-75)||(46672363-46672434)
chr3 (35-75)||(47434118-47434158)
chr3 (50-82)||(53888718-53888750)
chr3 (35-75)||(54126161-54126201)
[»] chr2 (46 HSPs)
chr2 (1-81)||(18780254-18780335)
chr2 (2-82)||(31550378-31550459)
chr2 (1-82)||(12964100-12964182)
chr2 (1-75)||(8991091-8991164)
chr2 (1-82)||(14008455-14008538)
chr2 (1-83)||(3039076-3039159)
chr2 (1-75)||(18018724-18018799)
chr2 (6-81)||(16519221-16519297)
chr2 (1-82)||(3119978-3120060)
chr2 (6-75)||(16625914-16625984)
chr2 (1-81)||(25960738-25960819)
chr2 (5-81)||(30312537-30312609)
chr2 (1-81)||(38293761-38293837)
chr2 (1-81)||(44137029-44137105)
chr2 (5-62)||(1725800-1725859)
chr2 (3-82)||(11514915-11514995)
chr2 (1-52)||(36567406-36567457)
chr2 (6-82)||(4003299-4003376)
chr2 (1-81)||(10165287-10165368)
chr2 (1-82)||(8411058-8411136)
chr2 (1-52)||(18826360-18826412)
chr2 (1-81)||(19382758-19382831)
chr2 (3-82)||(6655989-6656069)
chr2 (1-75)||(11522294-11522369)
chr2 (35-82)||(42644862-42644909)
chr2 (3-52)||(4041865-4041915)
chr2 (1-50)||(8555904-8555954)
chr2 (6-75)||(39180958-39181027)
chr2 (3-75)||(15555475-15555548)
chr2 (1-81)||(32761402-32761483)
chr2 (1-52)||(38023573-38023625)
chr2 (29-84)||(43572705-43572760)
chr2 (47-81)||(5321903-5321937)
chr2 (1-82)||(12941928-12942010)
chr2 (6-75)||(34757483-34757553)
chr2 (47-81)||(42644537-42644571)
chr2 (1-35)||(43333465-43333499)
chr2 (1-57)||(32243371-32243428)
chr2 (45-82)||(38216350-38216387)
chr2 (45-81)||(11950227-11950263)
chr2 (1-52)||(13766066-13766118)
chr2 (45-81)||(14008147-14008183)
chr2 (45-81)||(16625632-16625668)
chr2 (8-75)||(26905682-26905750)
chr2 (50-82)||(31083030-31083062)
chr2 (11-81)||(40357339-40357411)
[»] chr1 (57 HSPs)
chr1 (1-82)||(27499855-27499937)
chr1 (1-81)||(26940478-26940559)
chr1 (1-81)||(47905817-47905898)
chr1 (3-81)||(12293682-12293761)
chr1 (1-82)||(51246691-51246773)
chr1 (1-82)||(13061528-13061610)
chr1 (1-82)||(50476422-50476499)
chr1 (1-81)||(40707326-40707407)
chr1 (1-81)||(43572079-43572160)
chr1 (3-82)||(38794841-38794921)
chr1 (5-75)||(7401659-7401730)
chr1 (1-82)||(1688344-1688421)
chr1 (17-81)||(39179250-39179315)
chr1 (8-71)||(11017481-11017545)
chr1 (1-81)||(1523465-1523547)
chr1 (1-75)||(14152583-14152653)
chr1 (1-75)||(50247473-50247548)
chr1 (1-81)||(52073575-52073657)
chr1 (5-57)||(17688234-17688287)
chr1 (3-81)||(26757285-26757360)
chr1 (1-53)||(33991441-33991494)
chr1 (6-82)||(36886741-36886818)
chr1 (1-73)||(39889786-39889859)
chr1 (1-81)||(42488755-42488831)
chr1 (1-52)||(23871591-23871643)
chr1 (1-56)||(32295541-32295597)
chr1 (1-82)||(49103079-49103161)
chr1 (1-81)||(17556540-17556621)
chr1 (6-82)||(36269614-36269691)
chr1 (6-75)||(28718924-28718995)
chr1 (3-75)||(938368-938441)
chr1 (1-43)||(13255254-13255297)
chr1 (1-67)||(50586934-50587001)
chr1 (5-82)||(8156471-8156544)
chr1 (35-81)||(9595778-9595824)
chr1 (6-82)||(29091958-29092035)
chr1 (14-81)||(896636-896699)
chr1 (1-48)||(2926062-2926110)
chr1 (1-52)||(42162181-42162233)
chr1 (1-75)||(28773507-28773577)
chr1 (13-52)||(47206538-47206577)
chr1 (36-82)||(15464029-15464075)
chr1 (1-42)||(30538877-30538919)
chr1 (36-82)||(33991760-33991806)
chr1 (36-82)||(50247814-50247860)
chr1 (6-75)||(50599094-50599164)
chr1 (49-82)||(1278350-1278383)
chr1 (36-81)||(32300273-32300318)
chr1 (6-82)||(34154461-34154538)
chr1 (45-82)||(39125263-39125300)
chr1 (3-58)||(2175222-2175278)
chr1 (48-80)||(9173920-9173952)
chr1 (6-75)||(17760608-17760679)
chr1 (45-81)||(32299330-32299366)
chr1 (45-81)||(38795192-38795228)
chr1 (45-81)||(39508995-39509031)
chr1 (37-81)||(45565348-45565392)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-81)||(35582-35663)
scaffold0028 (36-82)||(35272-35318)
[»] scaffold0952 (1 HSPs)
scaffold0952 (1-52)||(3800-3852)
[»] scaffold0036 (1 HSPs)
scaffold0036 (6-82)||(82666-82744)
[»] scaffold1562 (1 HSPs)
scaffold1562 (5-62)||(29-87)
[»] scaffold1163 (1 HSPs)
scaffold1163 (3-80)||(1931-2009)
[»] scaffold1158 (1 HSPs)
scaffold1158 (5-62)||(2506-2564)
[»] scaffold0136 (1 HSPs)
scaffold0136 (3-81)||(2152-2231)
[»] scaffold0006 (1 HSPs)
scaffold0006 (45-82)||(59671-59708)
[»] scaffold0717 (1 HSPs)
scaffold0717 (30-81)||(1483-1534)
[»] scaffold0245 (1 HSPs)
scaffold0245 (49-82)||(4027-4060)
[»] scaffold0229 (1 HSPs)
scaffold0229 (49-82)||(4358-4391)
[»] scaffold0248 (1 HSPs)
scaffold0248 (6-75)||(328-399)
[»] scaffold0013 (1 HSPs)
scaffold0013 (3-55)||(107809-107861)


Alignment Details
Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 36639545 - 36639669
Alignment:
Q  80 ctagttaaattggaagagatcccttaccatctcatcaaaattttcttagattataacaaaagtagttagtaaaattaatattatgaaccctaaaaatact 179  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  36639545 ctagttaaattggaagagatctcttaccatctcatcaaaattttcttagattataacaaaagtagttagtaaaattaatactatgaaccctaaaaatagt 36639644  T
Q  180 aaaaagttatactatttgtttaatt 204  Q
     ||||||||||||||||||||||||    
T  36639645 gaaaagttatactatttgtttaatt 36639669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 3404701 - 3404782
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  3404701 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagcct 3404782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6771 - 6691
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcc 80  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||| ||||    
T  6771 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctatcctccaaactcccaaacaaagcc 6691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1942161 - 1942241
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||||||||||||||| ||||| |||||    
T  1942161 tgtcttctatttcttccacttgatccttccttttttcaaaaccctcccctcccttcccctccaaactcctaaacaaagcct 1942241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 34272468 - 34272385
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||||||  |||||||||||| | ||||||||| |||||| |||||||||||||| ||||||    
T  34272468 tgtcttctatttcttccacttgctccttcctttttttccaaaatcctcccctcccttccccttcaaactcccaaacaaagccta 34272385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36906140 - 36906063
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| ||||||||||||||     ||||||||||||||||||||||||||| ||||||    
T  36906140 tgtcttctatttcttccacttgctccttccttttttccaaaacc-----ctcccctcccctccaaactcccaaacaaagccta 36906063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4734624 - 4734694
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||||||||| |||||||||||||     |||||||||||||||||||||||||||||    
T  4734624 tgtcttctatttcttccacttgctccttccttttttccaaaa-----ccctcccctcccctccaaactcccaaaca 4734694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37659659 - 37659734
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||||  ||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||    
T  37659659 tgtcttctatttcttccactcactccttccttttttccaaaaccctcccctcccttccccttcaaactcccaaaca 37659734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 43733248 - 43733328
Alignment:
Q  1 tgtcttctatttcttccacttgctccttct-tttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcc 80  Q
    ||||||||||||||||| ||||||| |||  ||||||||||||| ||||||  ||||||||||||||||||||||| ||||    
T  43733248 tgtcttctatttcttcctcttgctcattccctttttccaaaaccctcccctttcctcccctccaaactcccaaacaaagcc 43733328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36103018 - 36103093
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||| | ||||||| |||||| ||||| | |||||||||||| |||||||||| |||||||    
T  36103018 tgtcttctatttcttccacctactccttcctttttttcaaaatcctcccctcccctctcctccaaacttccaaaca 36103093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 79746 - 79823
Alignment:
Q  6 tctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||| |||  |||||||| || || ||||||||| |||||||||||||| |||||| |||||    
T  79746 tctatttcttccacttgctcgttcctttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagcct 79823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25033333 - 25033260
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaa 73  Q
    ||||||||||||||||||||| |||||| |||||||| |||| | |||||||||||||  |||||||| |||||    
T  25033333 tgtcttctatttcttccacttactccttccttttttctaaaatcctcccctcccctccattccaaacttccaaa 25033260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34304669 - 34304616
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctccc 53  Q
    |||||||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  34304669 tgtcttctatttcttccacttgctccttccttttttccaaaatcttcccctccc 34304616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13865219 - 13865271
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcc 52  Q
    ||||||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  13865219 tgtcttctatttcttccacttgctccttcattttttccaaaatcctcccctcc 13865271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 26772771 - 26772851
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||| || ||||||||| || || ||| ||||| | |||||||||||| |||||| ||||||    
T  26772771 tcttctatttcttccacttgctcattccttttttcctaagccttcctctccctttccctccaaactcgcaaacaaagccta 26772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31297475 - 31297527
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcc 52  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  31297475 tgtcttctatttcttccacttgctccttcattttttccaaaaccctcctctcc 31297527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2474894 - 2474964
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||||| |||||| ||||||| |||||      ||||||||||||||||||||||||||||    
T  2474894 tgtcttctatttcttccacttactccttcctttttttcaaaa-----tcctcccctcccctccaaactcccaaaca 2474964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 21173987 - 21174066
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||| || ||||||||| || |  ||||||||| ||| |||||||||| |||||| |||||    
T  21173987 tcttctatttcttccacttgctcattccttttttcctaagcattcccctcccttccactccaaactcgcaaacaaagcct 21174066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 34349670 - 34349601
Alignment:
Q  8 tatttcttccacttgctccttcttttttc-caaaaccgtcccctcccc--tcccctccaaactcccaaaca 75  Q
    ||||||||| ||||||||||||||||||  ||||||| ||||||||||  |||||||||||||||||||||    
T  34349670 tatttcttc-acttgctccttcttttttttcaaaaccctcccctcccccctcccctccaaactcccaaaca 34349601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 31149872 - 31149802
Alignment:
Q  6 tctatttcttccacttgctccttctt-ttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||| ||| | |||||||||||  ||| ||||| |||||||||||||| ||||||    
T  31149872 tctatttcttccacttgctcattcatgttttccaaaacactccactcccttcccctccaaactcgcaaaca 31149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 34148443 - 34148398
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||    
T  34148443 ccaaaaccctcccctcccttcccctccaaactcccaaacaaagcct 34148398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 3635611 - 3635679
Alignment:
Q  8 tatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||| ||||||||| || ||||||||||||||| || | |||| |||||||||||||| ||||||    
T  3635611 tatttctttcacttgctcatttcttttttccaaaaccctctcatcccttcccctccaaactcgcaaaca 3635679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 13227942 - 13227978
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||| ||||||||||||    
T  13227942 tcccctcccctcccctccaaactctcaaacagagcct 13227978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 12319210 - 12319156
Alignment:
Q  7 ctatttcttccacttgctccttctttttt-ccaaaaccgtcccctcccctcccct 60  Q
    ||||||||| ||||||||| ||||||||| |||||||| ||||||||| ||||||    
T  12319210 ctatttctttcacttgctcattcttttttcccaaaaccttcccctcccttcccct 12319156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31598547 - 31598621
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||| |||||||||||||||| ||||| ||||||| | ||||| ||| || || | |||||||||||| ||||||    
T  31598547 tgtcctctatttcttccacttactcctcctttttttccaaaccctcctctaccttaccctccaaactcacaaaca 31598621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 1941904 - 1941867
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  1941904 tcccctcccttcccctccaaactcccaaacaaagccta 1941867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 36906407 - 36906452
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||| || ||||||||| ||||||||||||||||||||| |||||    
T  36906407 ccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 36906452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 1840341 - 1840385
Alignment:
Q  9 atttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||| |||||||||||| || ||||||||    
T  1840341 atttcttccacttgctccttccttttttccaaacccctcccctcc 1840385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 4074857 - 4074893
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||| |||||| |||||    
T  4074857 tcccctcccctcccctccaaactctcaaacaaagcct 4074893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 39418259 - 39418295
Alignment:
Q  46 cccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  39418259 ccccttccctcccctccaaactcgcaaacagagccta 39418295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7182319 - 7182401
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  7182319 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagccta 7182401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41363940 - 41364022
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  41363940 tgtcttctatttcttccacttgctccttccttttttccaaaaccgttccctcccctcccctccaaactcccaaacaaagccta 41364022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38317357 - 38317440
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcctag 83  Q
    ||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||||| |||||||    
T  38317357 tgtcttctatttcttccacttgctccttccttttttccaaaaccctctcctcccctcccctcccaactcccaaacaaagcctag 38317440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38365982 - 38365901
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||||| |||||    
T  38365982 tgtcttctatttcttccacttgctccttccttttttctaaaactctcccctcccctcccctccaaactcccaaacaaagcct 38365901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32948645 - 32948726
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||| |||||    
T  32948645 tgtcttctatttctttcacttgctccttccttttttccgaaaccctcccctcccctcccttccaaactcccaaacaaagcct 32948726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16535644 - 16535569
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||| |||||||||||||    
T  16535644 tgtcttctatttcttccacttgctccttccttttttcccaaaccctcccctcctctcccctctaaactcccaaaca 16535569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 52594752 - 52594827
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||| |||| |||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  52594752 tgtcttctatttcttcaacttactcctttcttttttccaaaaccctcccctccccttccctccaaactcccaaaca 52594827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31529972 - 31529898
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttt-tccaaaaccgtcccctcccctcccctccaaactcccaaac 74  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||||||||||| |||||    
T  31529972 tgtcttctatttcttccacttgctccttccttttctccaaaaccttcccctcctctcccctccaaactctcaaac 31529898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 50642008 - 50641928
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||| ||| |||| |||||||  ||||||||||||| ||||||||||||||||| ||||||    
T  50642008 tgtcttctatttcttccacttgctctttcatttt-ccaaaactctcccctcccctcctctccaaactcccaaacaaagccta 50641928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 904150 - 904074
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||||||||||||| | ||| |    |||||||||||||||||||||||||||| |||||    
T  904150 tgtcttctatttcttccacttgctccttctttttttctaaaac----cctcccctcccctccaaactcccaaacaaagcct 904074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13270401 - 13270471
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||||||||| |||||||||||||     |||||||||||||||||||||||||||||    
T  13270401 tgtcttctatttcttccacttgctccttccttttttccaaaa-----ccctcccctcccctccaaactcccaaaca 13270471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 54806428 - 54806346
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||| |||| |||||||||||||| || |||||||||||||| ||||||||| ||| ||||||||||||||||| ||||||    
T  54806428 tgtcttttattccttccacttgctccatcattttttccaaaaccctcccctcccttcctctccaaactcccaaacaaagccta 54806346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3127139 - 3127208
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcc 69  Q
    ||||||||||||||| || |||||||||| |||||||||||| | |||||||||||||||||||||||||    
T  3127139 tgtcttctatttctttcatttgctccttccttttttccaaaatcctcccctcccctcccctccaaactcc 3127208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 31187230 - 31187303
Alignment:
Q  9 atttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||| ||||| |||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  31187230 atttcttccagttgcttcttccttttttccaaaaccatcccctcccgtcccctccaaactcccaaacaaagcct 31187303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 35959144 - 35959076
Alignment:
Q  6 tctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||||||| ||||||    
T  35959144 tctatttcttccacttgctccttcctctttccaaaacc-tcccctcccttcccctccaaactcgcaaaca 35959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 17622591 - 17622669
Alignment:
Q  1 tgtcttctatttcttccacttgctccttctttttt--ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||||||||||||  ||||||||     |||||||||||||||| |||||||||| ||||||    
T  17622591 tgtcttctatttcttccacttgctccttcttttttttccaaaacc-----ctcccctcccctccaacctcccaaacaaagccta 17622669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 46177060 - 46177136
Alignment:
Q  6 tctatttcttccacttgctccttctttt-ttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||| |||||||||| |||||||||| ||||||||| | |||||||||||| |||||| |||||    
T  46177060 tctatttcttccacttgttccttctttttttccaaaaccctcccctccctttccctccaaactcacaaacaaagcct 46177136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24279867 - 24279786
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||| |||| ||||||||||||||||| |||||||||||||| ||| ||||| ||||||| |||||||||| || |||||    
T  24279867 tgtcttttattccttccacttgctccttccttttttccaaaaccctccactcccttcccctctaaactcccaatcaaagcct 24279786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 48830943 - 48830995
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  48830943 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 48830995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13269906 - 13269848
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctccc 58  Q
    |||||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||    
T  13269906 tgtcttctatttcttccacttgctccttcctttttcccaaaaccctccccttccctccc 13269848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 18964885 - 18964931
Alignment:
Q  29 cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  18964885 cttttttccaaaaccctcctctcccctcccctccaaactcccaaaca 18964931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32060642 - 32060560
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||| ||| |||| ||||||| |||||| ||||||  |||| || ||||||||||||||||||||||| ||||||    
T  32060642 tgtcttctatttattctacttactccttcctttttttcaaaactctcccatctcctcccctccaaactcccaaacaaagccta 32060560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 16318568 - 16318495
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||||||| || ||||||||| || || ||||||||| ||||||| |||||| ||||||    
T  16318568 tcttctatttcttccacttgctcattccttttttcctaagccttcccctcccttcccctcaaaactcgcaaaca 16318495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 45899299 - 45899263
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||||||||||||||||    
T  45899299 tcccctcccctcccctccaaactcccaaacagagcct 45899263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 21358026 - 21357979
Alignment:
Q  35 tccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  21358026 tccaaaaccctcccctcccttcccctccaaactctcaaacagagccta 21357979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21296233 - 21296290
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcc 57  Q
    ||||||||||||||||||||| |||||| | ||||||||||||| |||| ||||||||    
T  21296233 tgtcttctatttcttccacttactccttccctttttccaaaaccctcccttcccctcc 21296290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37756841 - 37756882
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaa 41  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  37756841 tgtcttctatttcttccacttgctccttccttttttccaaaa 37756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 47669759 - 47669691
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||| ||||||||||||||| ||||||| |||||||     |||||||||||| ||||||||||||||    
T  47669759 tcttctattttttccacttgctcctttctttttttcaaaacc-----ctcccctccccttcaaactcccaaaca 47669691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 52636709 - 52636632
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||  || ||||||||||||   |||| |||| |||||||||||||| |||||| ||||||    
T  52636709 tctatttcttccacttgctcagtccttttttccaaaattctcccatcccttcccctccaaactcgcaaacaaagccta 52636632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 33500468 - 33500392
Alignment:
Q  6 tctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||| || ||||||||  || || ||||||||| |||| ||||||||| |||||| |||||    
T  33500468 tctatttcttccacttgctcattccttttttctcaagccttcccctcccttcccttccaaactcgcaaacaaagcct 33500392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 16422864 - 16422797
Alignment:
Q  8 tatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||| |||||| ||||||||| | || |  ||||||||| |||||||||||||| ||||||    
T  16422864 tatttcttccagttgctcattctttttttccaagctttcccctcccttcccctccaaactcacaaaca 16422797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20533880 - 20533837
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaacc 43  Q
    ||||||||||||||||||||| |||||| |||||||||||||||    
T  20533880 tgtcttctatttcttccacttactccttccttttttccaaaacc 20533837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 22845096 - 22845049
Alignment:
Q  35 tccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  22845096 tccaaagccctcccctcccttcccctccaaactcccaaacaaagccta 22845049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 82
Target Start/End: Complemental strand, 31340705 - 31340658
Alignment:
Q  35 tccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| |||| |||| ||||||||||||||||||||| ||||||    
T  31340705 tccaaaaccctcccatcccttcccctccaaactcccaaacaaagccta 31340658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 32651392 - 32651443
Alignment:
Q  2 gtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcc 52  Q
    |||||||| ||||||||||| ||||||| |||||||||||||| ||||||||    
T  32651392 gtcttctaattcttccacttactccttctttttttccaaaaccctcccctcc 32651443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 20534145 - 20534191
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  20534145 ccaaagccctcccctcccttcccctccaaactcccaaacaaagccta 20534191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 41844348 - 41844314
Alignment:
Q  47 ccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||||||| |||||    
T  41844348 ccctcccctcccctccaaactcccaaacaaagcct 41844314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42650593 - 42650521
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||| |||||||||||||||| |||| | ||||||||||| || ||||||| | |||||||||||||| ||||||    
T  42650593 tgtcctctatttcttccacttactccat-ttttttccaaa-ccttcccctcgcttcccctccaaactcgcaaaca 42650521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 49668236 - 49668306
Alignment:
Q  6 tctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||| || ||||||||  ||||| ||||||| | ||| |||||||||| ||||||    
T  49668236 tctatttcttccacttgctcattccttttttctcaaaccttcccctcacttcctctccaaactcgcaaaca 49668306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30765651 - 30765598
Alignment:
Q  5 ttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcc 57  Q
    |||||||||||||||||||||||| |||||||| |||||  || ||||||||||    
T  30765651 ttctatttcttccacttgctccttccttttttctaaaactctctcctcccctcc 30765598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 32648867 - 32648822
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||| ||||||||| |||||||||||| |||||||| |||||    
T  32648867 ccaaaaccctcccctcccttcccctccaaacccccaaacaaagcct 32648822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 41844662 - 41844699
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  41844662 tcccctcccttcccctccaaactcccaaacaaagccta 41844699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 45022853 - 45022898
Alignment:
Q  7 ctatttcttccacttgctccttc-ttttttccaaaaccgtcccctc 51  Q
    |||||| |||||||||||||||| |||||||||||||| |||||||    
T  45022853 ctattttttccacttgctccttctttttttccaaaaccctcccctc 45022898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 45823503 - 45823426
Alignment:
Q  6 tctatttcttccacttgctc-cttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||| || ||||||||| || |  ||||||||| || | ||||||||| |||||| ||||||    
T  45823503 tctatttcttccacttgctcactccttttttcccaagcattcccctcccttctcttccaaactcgcaaacaaagccta 45823426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 49936726 - 49936759
Alignment:
Q  47 ccctcccctcccctccaaactcccaaacagagcc 80  Q
    ||||||||||||||||||||||||||||| ||||    
T  49936726 ccctcccctcccctccaaactcccaaacaaagcc 49936759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 12708967 - 12709043
Alignment:
Q  6 tctatttcttccacttgctccttctttttt-ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||| ||  ||||||||| || || || ||||||||  |||||||||||||| |||||| |||||    
T  12708967 tctatttcttccacttacttattctttttttcccaagccttcccctccaatcccctccaaactcgcaaacaaagcct 12709043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 22845383 - 22845419
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  22845383 tcccttccccacccctccaaactcccaaacagagcct 22845419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3658639 - 3658721
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttt-tttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  3658639 tgtcttctatttcttccacttgctccttccttctttccaaaaccctcccctcccctcccctccaaactcccaaacaaagccta 3658721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5968171 - 5968252
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | |||||||||||||| ||||||    
T  5968171 tgtcttctatttcttccacttgctccttcctttttccaaaaccctcccctcccctccctttcaaactcccaaacaaagccta 5968252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7667292 - 7667375
Alignment:
Q  1 tgtcttctatttcttccacttgctccttct--tttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  7667292 tgtcttctatttcttccacttgctcattctattttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagccta 7667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36747250 - 36747167
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| |||||| ||||||    
T  36747250 tgtcttctatttcttccacttgctccttcatttttttccaaaaccctcccctcccctcccctccaaactctcaaacaaagccta 36747167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33406760 - 33406841
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| ||||||||||||||||||||||||||||||| |||||    
T  33406760 tgtcttctatttcttccacttgctccttccttttttttaaaaccctcccctcccctcccctccaaactcccaaacaaagcct 33406841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 46745714 - 46745780
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaac 66  Q
    |||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  46745714 tgtcttctattttttccacttgctccttccttttttccaaaaccctcccctcccctcccctccaaac 46745780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34652179 - 34652254
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||||||||| |||||| |||||||| |||||  |||||||||||||||| |||||||    
T  34652179 tgtcttctatttcttccacttgctccttcctttttcccaaaaccctccccctccctcccctccaaacttccaaaca 34652254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3571887 - 3571945
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctccc 58  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  3571887 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctccc 3571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33113769 - 33113845
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||||||| |||||||| ||||     ||||||||||||||||||||||||||||| |||||    
T  33113769 tgtcttctatttcttccacttgctccttccttttttctaaaa-----ccctcccctcccctccaaactcccaaacaaagcct 33113845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 47276130 - 47276206
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||| |||||||| |  ||||||| |||||| |||||||||||||| ||||||||||||||||    
T  47276130 tgtcttctatttcttccatttgctcctccctttttttcaaaaaccctcccctcccctcccatccaaactcccaaaca 47276206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44720045 - 44719971
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||| |||| |||||| ||||||  |||||| ||| ||||||||||||||||||| |||||||    
T  44720045 tgtcttctatttcttctacttactccttattttttttaaaaccctcctctcccctcccctccaaacttccaaaca 44719971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 15749079 - 15749152
Alignment:
Q  3 tcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||||||| ||| |||||||| || || ||||||||| |||||||||||||| ||||||    
T  15749079 tcttctatttcttccacttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaaca 15749152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33810340 - 33810421
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||| || |||| |||||||||||||  |||| |||||| | ||||||||||||||||| |||||    
T  33810340 tgtcttctatttcttccacttacttcttccttttttccaaaactctcccatccccttcgctccaaactcccaaacaaagcct 33810421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 38505467 - 38505544
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||| ||| |||||||| || || ||||||||| |||||||||||||| |||||| ||||||    
T  38505467 tctatttcttccacttgctcattccttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagccta 38505544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23325729 - 23325781
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  23325729 tgtcttctatttcttccacttactccttccttttttccaaaaccgtcccctcc 23325781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 42854184 - 42854119
Alignment:
Q  17 cacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||| |||||||||| || ||||||||| ||||||||||| || |||||| ||||||    
T  42854184 cacttgctccttcctttttccaaagccctcccctcccttcccctccaaattcacaaacaaagccta 42854119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 23620921 - 23620969
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtccc 48  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  23620921 tgtcttctatttcttccacttgctccttccttttttccaaaaccctccc 23620969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43778704 - 43778791
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttt--tttccaaaa----ccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||  || |||  |||||||||    || ||||||||||||||||||||||| ||||||| ||||||    
T  43778704 tgtcttctatttcttccacttgcttttttttttctttccaaaaccctccctcccctcccctcccctccaaacttccaaacaaagccta 43778791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 42113090 - 42113136
Alignment:
Q  6 tctatttcttccacttgctcctt-cttttttccaaaaccgtcccctc 51  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  42113090 tctatttcttccacttgctccttccttttttccaaaaccctcccctc 42113136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 43188816 - 43188755
Alignment:
Q  8 tatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaa 73  Q
    |||||||||| ||||||||||| ||||||||||||||     |||||||||||||||||||||||||    
T  43188816 tatttcttccccttgctccttccttttttccaaaacc-----ctcccctcccctccaaactcccaaa 43188755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 41002383 - 41002445
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcc 69  Q
    |||||||||||||||||||||||| |||||||||||||| ||||  || |||||||||| |||||    
T  41002383 tctatttcttccacttgctccttcattttttccaaaaccctccc--cctctcccctccagactcc 41002445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 12863744 - 12863800
Alignment:
Q  2 gtcttctatttcttccacttgctccttctt-ttttccaaaaccgtcccctcccctcc 57  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||| ||| |||||    
T  12863744 gtcttctatttcttccacttgcttcttcttcttttccaaaaccttccactctcctcc 12863800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19644254 - 19644206
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtccc 48  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| ||||    
T  19644254 tgtcttgtatttcttccacttgctccttccttttttccaaaaccctccc 19644206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 19791641 - 19791565
Alignment:
Q  5 ttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctccc-----ctccaaactcccaaaca 75  Q
    ||||||||||||||||||||| ||| |||||||| ||||| ||||||||||||||     |||||||||| ||||||    
T  19791641 ttctatttcttccacttgctcattccttttttcccaaaccttcccctcccctcccttcccctccaaactcgcaaaca 19791565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 42622201 - 42622253
Alignment:
Q  30 ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||  ||| ||||||||||||||||||| ||||||| ||||||    
T  42622201 ttttttccaaaactctccactcccctcccctccaaactgccaaacaaagccta 42622253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 6746706 - 6746776
Alignment:
Q  13 cttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||| ||| ||||||||||| || ||||||| | ||||||| |||||| |||||| ||||||    
T  6746706 cttccacttgctcattccttttttccaaatccctcccctcacttcccctctaaactcacaaacaaagccta 6746776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 32650513 - 32650583
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||| ||| |||||||| ||||  || |||| | |||||||||||||| ||||||    
T  32650513 tctatttcttccacttgctcattctttttttcccaaactttctcctctcttcccctccaaactcgcaaaca 32650583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 45510574 - 45510604
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||||||||||||    
T  45510574 tcccctcccctcccctccaaactcccaaaca 45510604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7391535 - 7391616
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||| | |||||| ||||||| | ||||| | ||||||  |||||||||||||| ||| || |||||    
T  7391535 tgtcttctatttcttccacctactccttcctttttttccaaacccttccctccattcccctccaaactcgcaagcaaagcct 7391616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 7667027 - 7666982
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||| || ||||||||| ||||||||||||||||||||| |||||    
T  7667027 ccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 7666982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 33872218 - 33872263
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||| || |||||||||||||||||||||||| |||||| |||||    
T  33872218 ccaaagccctcccctcccctcccctccaaactcgcaaacaaagcct 33872263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 34651907 - 34651870
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  34651907 tcccctcccttcccctccaaactcccaaacaaagccta 34651870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 35902112 - 35902075
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaa 73  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  35902112 ccaaaaccctcccctcccttcccctccaaactcccaaa 35902075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 38236010 - 38236055
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||  ||||||||| ||||||||||||||||||||| |||||    
T  38236010 ccaaaactctcccctcccttcccctccaaactcccaaacaaagcct 38236055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 44690081 - 44690126
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||| || ||||||||| ||||||||||| |||||||||||||||    
T  44690081 ccaaagccctcccctcccttcccctccaaattcccaaacagagcct 44690126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 23465854 - 23465818
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| |||||||||||||||||||||||||| |||||    
T  23465854 tcccttcccctcccctccaaactcccaaacaaagcct 23465818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28437670 - 28437721
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccct 50  Q
    |||||| ||||||||||||||||||||||  |||||| ||||||| ||||||    
T  28437670 tgtcttttatttcttccacttgctccttccttttttttcaaaaccctcccct 28437721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 38505198 - 38505162
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| |||||||||||||||||||||||||| |||||    
T  38505198 tcccttcccctcccctccaaactcccaaacaaagcct 38505162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 41471675 - 41471707
Alignment:
Q  50 tcccctcccctccaaactcccaaacagagccta 82  Q
    |||||| ||||||||||||||||||||||||||    
T  41471675 tccccttccctccaaactcccaaacagagccta 41471707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 42112807 - 42112775
Alignment:
Q  50 tcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||| ||||||    
T  42112807 tcccctcccctccaaactcccaaacaaagccta 42112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 44643733 - 44643657
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||| |||||||||  ||| || | || | |||||| ||||||| |||||| |||||    
T  44643733 tctatttcttccacttgctccttcattttttccattaccctctcatctcttccccttcaaactcgcaaacaaagcct 44643657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2365725 - 2365807
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  2365725 tgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcccctcccctccaaactcccaaacaaagccta 2365807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26481255 - 26481330
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  26481255 tgtcttctatttcttccacttgctacttcctttttttcaaaaccctcccctcccctcccctccaaactcccaaaca 26481330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 26713811 - 26713735
Alignment:
Q  6 tctatttcttccacttgctccttctttt-ttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||| |||||| |||||    
T  26713811 tctatttcttccacttgctccttcctttattccaaaaccctcccctcccttcccctccaaactcgcaaacaaagcct 26713735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26574523 - 26574580
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcc 57  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  26574523 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctcc 26574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 24734835 - 24734758
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||     ||||| ||||||||||||||||||||| ||||||    
T  24734835 tgtcttctatttcttccacttgctcgttccttttttccaaaacc-----ctcccttcccctccaaactcccaaacaaagccta 24734758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 1567232 - 1567159
Alignment:
Q  3 tcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||||||| ||| |||||||| || || ||||||||| |||||||||||||| ||||||    
T  1567232 tcttctatttcttccacttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaaca 1567159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 31345499 - 31345580
Alignment:
Q  2 gtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||| ||||||| || ||||| |||||| ||||| | ||||||| ||||||||||||||||||||||| ||||||    
T  31345499 gtcttctattttttccactcgcaccttcctttttttcaaaaacctcccctcacctcccctccaaactcccaaacaaagccta 31345580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 34914574 - 34914498
Alignment:
Q  7 ctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||| || || | |||||||||||||| |||||| |||||||||| ||||||||||||| ||||||    
T  34914574 ctatttcttccacttacttctcccttttttccaaaaccctccccttccctcccctcaaaactcccaaacaaagccta 34914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1029246 - 1029198
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtccc 48  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  1029246 tgtcttctatttcttccacttgctccttccttttttccaaaaccctccc 1029198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5825286 - 5825234
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  5825286 tgtcttctatttctttcacttgctccttccttttttccaaaaccctcccctcc 5825234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29241961 - 29242013
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  29241961 tgtcttctatttcttccatttgctccttccttttttccaaaaccctcccctcc 29242013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 24735100 - 24735139
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  24735100 ccaaaaccctcccctcccctcccctccaaactcccaaaca 24735139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34731298 - 34731372
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctccc-ctcccctccaaactcccaaac 74  Q
    ||||||||||||||| ||||| |||||| ||||||||||| ||   |||||||  |||||||||||||| |||||    
T  34731298 tgtcttctatttcttacacttactcctttttttttccaaaccctctccctccctttcccctccaaactcgcaaac 34731372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 28551761 - 28551724
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  28551761 tcccttcccctcccctccaaactcccaaacaaagccta 28551724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 29241687 - 29241650
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  29241687 tcccctcccttcccctccaaactcccaaacaaagccta 29241650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 6e-27; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35701013 - 35700932
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  35701013 tgtcttctatttctttcacttgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagcct 35700932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27480298 - 27480373
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  27480298 tgtcttctatttcttccacttgcttcttccttttttccaaaaccctcccctcctctccccttcaaactcccaaaca 27480373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 10295436 - 10295354
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcc-cctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||| | ||||||||||| ||||||||||| || |||||    
T  10295436 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcctcatcccctccccttcaaactcccaatcaaagcct 10295354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38928830 - 38928888
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctccc 58  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  38928830 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctccc 38928888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 35683603 - 35683682
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||| || ||||||||| ||||| ||||||||| |||||| ||||||| |||||| |||||    
T  35683603 tcttctatttcttccacttgctcattccttttttcctaaaccttcccctcccttccccttcaaactcgcaaacaaagcct 35683682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32760710 - 32760633
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||| |||||||||||| ||||||||| ||||||||||||||     ||||||||||||||||||||||||||| ||||||    
T  32760710 tgtcttatatttcttccacctgctccttccttttttccaaaacc-----ctcccctcccctccaaactcccaaacaaagccta 32760633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 5772849 - 5772928
Alignment:
Q  3 tcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||| ||| |||||||| || || ||||||||| ||||||||||||||  ||||| |||||    
T  5772849 tcttctatttcttccacttgctcattctttttttcctaagccttcccctcccttcccctccaaactcttaaacaaagcct 5772928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 10437934 - 10437856
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcctag 83  Q
    |||||||||||||||||||| ||| |||||||| || || ||| ||||| |||||||||||||| |||||| |||||||    
T  10437934 tctatttcttccacttgctcattccttttttcccaagccttcctctcccttcccctccaaactcgcaaacaaagcctag 10437856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 1658130 - 1658078
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  1658130 tgtcttctatttcttccacttgctccttccttttttctaaaaccctcccctcc 1658078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2020934 - 2020882
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    ||||| |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  2020934 tgtctactatttcttccacttgctccttccttttttccaaaaccctcccctcc 2020882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4649115 - 4649167
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcc 52  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  4649115 tgtcttctatttcttccacttgctcattctttttttccaaaaccctcccctcc 4649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 12229636 - 12229672
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||||||||||||||||    
T  12229636 tcccctcccctcccctccaaactcccaaacagagcct 12229672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17092851 - 17092799
Alignment:
Q  1 tgtcttctatttcttccacttgctccttctt-ttttccaaaaccgtcccctcc 52  Q
    |||||||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  17092851 tgtcttctatatcttccacttgctccttctttttttccaaaaccctcccctcc 17092799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 35704663 - 35704583
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcc 80  Q
    |||| ||||||||||||||||| ||||| |||||| |||||||| ||||||||| ||| |||||||||  |||||| ||||    
T  35704663 tgtcctctatttcttccacttgttccttcctttttcccaaaaccctcccctcccttcctctccaaacttgcaaacaaagcc 35704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38302481 - 38302533
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  38302481 tgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcc 38302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41694930 - 41694878
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  41694930 tgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcc 41694878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 35708888 - 35708962
Alignment:
Q  9 atttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||| |||||||  |||||| | ||||| ||||||||| |||||||||||||| |||||| |||||    
T  35708888 atttcttccacttactccttccttttttttccaaaccctcccctcccttcccctccaaactcacaaacaaagcct 35708962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41638308 - 41638233
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||| |||||||||||||| ||||||||||||||  | ||||||| ||||| ||||| | |||||||    
T  41638308 tgtcttctatttcatccacttgctccttccttttttccaaaactcttccctcccttccccaccaaatttccaaaca 41638233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 1176061 - 1176118
Alignment:
Q  2 gtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctccc 58  Q
    |||||||||| |||||||||||||||| |||||||||||| || ||||||||| ||||    
T  1176061 gtcttctattccttccacttgctccttccttttttccaaagccctcccctcccttccc 1176118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 9096262 - 9096213
Alignment:
Q  8 tatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcc 57  Q
    |||||||||||||||||||||| |||||||||| || |||| ||||||||    
T  9096262 tatttcttccacttgctccttcctttttccaaagccctcccttcccctcc 9096213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 18670981 - 18670904
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||| ||||| || ||| |||||||| || || ||||||||| |||||||||||||| |||||| ||||||    
T  18670981 tctatttcttcgacttgatcattccttttttccgaagccttcccctcccttcccctccaaactcacaaacaaagccta 18670904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15058575 - 15058631
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctc 56  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| ||  ||||||||    
T  15058575 tgtcttttatttcttccacttgctccttccttttttccaaaaccatcttctcccctc 15058631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 38289539 - 38289575
Alignment:
Q  47 ccctcccctcccctccaaactcccaaacagagcctag 83  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38289539 ccctcccctcccctccaaactcccaaacaaagcctag 38289575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 37508527 - 37508598
Alignment:
Q  8 tatttcttccacttgctccttctttttt--ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||| || ||||||  |||||||| ||||||||||    ||||||||||||||||| |||||    
T  37508527 tatttcttccacttgctctttattttttttccaaaaccctcccctcccc----ctccaaactcccaaacaaagcct 37508598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 43496457 - 43496379
Alignment:
Q  5 ttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||| | || |||  |||||||||||||| ||||||  | |||||||||||||| |||||| |||||    
T  43496457 ttctatttcttccactagttctttcccttttttccaaaaccctcccctttcttcccctccaaactcgcaaacaaagcct 43496379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 9684913 - 9684990
Alignment:
Q  6 tctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||| |||||||||||||  ||||||||||| || ||||||||  ||| |||| ||||| |||||| |||||    
T  9684913 tctatttctttcacttgctccttcaattttttccaaacccctcccctcctttcctctcccaactcacaaacaaagcct 9684990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 10295704 - 10295750
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  10295704 ccaaagccctcccctcccttcccctccaaactcccaaacaaagccta 10295750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 41923127 - 41923062
Alignment:
Q  5 ttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactc 68  Q
    |||||||||||||||||||||||||  |||||| ||||||| || ||| |  ||||||||||||||    
T  41923127 ttctatttcttccacttgctccttccttttttttcaaaaccctctccttctttcccctccaaactc 41923062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 5696702 - 5696735
Alignment:
Q  48 cctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||| ||||||||||||    
T  5696702 cctcccctcccctccaaactcgcaaacagagcct 5696735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 25598623 - 25598586
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  25598623 tcccctcccttcccctccaaactcccaaacaaagccta 25598586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 38120049 - 38120012
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  38120049 tcccctcccttcccctccaaactcccaaacaaagccta 38120012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 39649517 - 39649441
Alignment:
Q  8 tatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||| |||  |||||||| || || | ||||||| | |||||||||||| |||||| ||||||    
T  39649517 tatttcttccacttgctcattcctttttttcccaagcctttccctcccttgccctccaaactcgcaaacaaagccta 39649441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 32824610 - 32824534
Alignment:
Q  7 ctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||  |||||||||||| ||||| |||||| |  ||||||||| || ||||||||||| |||||| ||||||    
T  32824610 ctatttctaacacttgctcctttcttttctccaaagcactcccctcccttctcctccaaactcgcaaacaaagccta 32824534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34306100 - 34306019
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccct-cccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  34306100 tgtcttctatttcttccacttgctccttcctttttccaaaaccctcccctcccctccccctccaaactcccaaacaaagcct 34306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30132014 - 30132095
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| ||||| | ||||| ||||||||||||||||||||| ||||||||| ||||||    
T  30132014 tgtcttctatttcttccacttgctccttccttttttcgaaaccctcccctcccctcccctccaaattcccaaacaaagccta 30132095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47789574 - 47789655
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||||||| ||||||| | |||| ||||||||| ||||||||||||||||||||| |||||    
T  47789574 tgtcttctatttcttccacttgctccttccttttttctacaaccctcccctcccttcccctccaaactcccaaacaaagcct 47789655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17642543 - 17642481
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctcc 62  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  17642543 tgtcttctatttcttccacttgcttcttccttttttccaaaaccctcccctcccctcccctcc 17642481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42583399 - 42583476
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||     ||||||||||||||||||||||||||| ||||||    
T  42583399 tgtcttctatttcttccacttgctcattccttttttccaaaacc-----ctcccctcccctccaaactcccaaacaaagccta 42583476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 45555586 - 45555508
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||||||  ||||||||||||     ||||||| ||||||||||||||||||||| ||||||    
T  45555586 tgtcttctatttcttccacttgctccttccattttttccaaaa-----ccctcccatcccctccaaactcccaaacaaagccta 45555508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 35283036 - 35282961
Alignment:
Q  6 tctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||| ||||| | ||||| |||||| || |||||||||||||| |||||| |||||    
T  35283036 tctatttcttccacttgctccttcctttttaccaaaccctccccttccttcccctccaaactcgcaaacaaagcct 35282961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 49860789 - 49860718
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactccca 71  Q
    |||||||||||||||||| |||||||||| |||||||||||||| | |||||  ||||||||||||||||||    
T  49860789 tgtcttctatttcttccaattgctccttccttttttccaaaacccttccctcatctcccctccaaactccca 49860718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 46017181 - 46017099
Alignment:
Q  1 tgtcttctatttcttccacttgctccttctttttt-ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||| ||||||| ||||| ||||||||||||| |||||| | | ||||||||| ||||||||||||||||||| ||||||    
T  46017181 tgtcttccatttctttcacttactccttctttttttccaaaatccttccctccccttccctccaaactcccaaacaaagccta 46017099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 53620242 - 53620160
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||| ||||||||| |||||||||||||| ||||||||||| || || |||||| |||||||||||||| |||||| ||||||    
T  53620242 tgtcctctatttctcccacttgctccttccttttttccaaagccctcacctcccttcccctccaaactcgcaaacaaagccta 53620160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 47714800 - 47714885
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaa-----ccgtcccctcccctcccctccaaactcccaaacagagcc 80  Q
    |||||||||||||||||||||||||||| ||||||||  |||     || ||||||||||||||||||||||||||||||| ||||    
T  47714800 tgtcttctatttcttccacttgctccttccttttttctcaaactctcccctcccctcccctcccctccaaactcccaaacaaagcc 47714885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 36796376 - 36796324
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  36796376 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 36796324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 41962103 - 41962155
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41962103 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 41962155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 49183640 - 49183564
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||| ||| |||||||| ||||| ||||||||  |||||||||||||| |||||| |||||    
T  49183640 tctatttcttccacttgctcattccttttttcccaaaccttcccctccattcccctccaaactcacaaacaaagcct 49183564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 2420611 - 2420536
Alignment:
Q  8 tatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||| ||||||||||||||||| |||||| ||||||| ||||||||  ||||||| ||||||||||||| ||||||    
T  2420611 tattacttccacttgctccttcctttttttcaaaaccctcccctccattcccctctaaactcccaaacaaagccta 2420536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 46312549 - 46312619
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||  |||||| ||||||||||||||     |||||||||||||||||||||||||||    
T  46312549 tgtcttctatttcttccacttagtccttccttttttccaaaacc-----ctcccctcccctccaaactcccaaaca 46312619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23163477 - 23163435
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaacc 43  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  23163477 tgtcttctatttcttccacttgctccttcctttttccaaaacc 23163435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32858784 - 32858700
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc---ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||| |||||||||||||||||||| |||   ||||||||||| || |||||| || |||||||||||||| |||||| ||||||    
T  32858784 tgtcatctatttcttccacttgctcattccttttttttccaaacccctccccttccttcccctccaaactcgcaaacaaagccta 32858700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29623191 - 29623107
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttc-caaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||| ||||||||||||||||||||||||  ||||||| ||||||| ||||||| | ||||||| |||||| |||||| ||||||    
T  29623191 tgtcctctatttcttccacttgctccttcctttttttctcaaaaccctcccctctcttcccctctaaactcgcaaacaaagccta 29623107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 38592916 - 38592852
Alignment:
Q  15 tccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||| || |||||||||||||||   ||||||||||||||||||||||||||||| |||||    
T  38592916 tccacttgctcatttcttttttccaaaacc---ccctcccctcccctccaaactcccaaacaaagcct 38592852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3043246 - 3043298
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  3043246 tgtcttctatttcttccacttgctccttccttttttccaaaatcctcccctcc 3043298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33982847 - 33982899
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  33982847 tgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcc 33982899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 43237244 - 43237192
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||    
T  43237244 tgtcttctatttcttccacttgctccttccttttttctaaaaccctcccctcc 43237192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3707059 - 3706977
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| ||||||||||||||||||||||||  |||||| |||| || ||||||||| | ||||| |||||| |||||| |||||    
T  3707059 tgtcatctatttcttccacttgctccttccttttttttcaaacccatcccctccctttccctctaaactcgcaaacaaagcct 3706977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 39499138 - 39499067
Alignment:
Q  11 ttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||| ||||||  |||||| | |||||| ||||| |||||||||||||||| |||||    
T  39499138 ttcttccacttgctccttcctttttttaaaaacctttccctcctctcccttccaaactcccaaacaaagcct 39499067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 3537156 - 3537086
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||| ||| ||| ||||||| ||| || ||||||||| |||||||||||||| ||||||    
T  3537156 tctatttcttccacttactcattccttttttctaaagccttcccctcccttcccctccaaactcgcaaaca 3537086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 43007626 - 43007676
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  43007626 tcttctatttcttccacttgctacttccttttttccaaaaccctcccctcc 43007676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 52620698 - 52620652
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||||    
T  52620698 ccaaagccctcccctcccctcccctccaaactcccaaacaaagccta 52620652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1133052 - 1133135
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc---ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| |||||||| ||||||||||| |||   ||||||||||| || ||||||||| |||||| ||||||| |||||| |||||    
T  1133052 tgtcatctatttcgtccacttgctcattccttttttttccaaacccctcccctcccttcccctacaaactcgcaaacaaagcct 1133135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 30121385 - 30121340
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||    
T  30121385 ccaaagccctcccctcccctcccctccaaactcccaaacaaagcct 30121340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 32859066 - 32859103
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  32859066 tcccctcccctcccctccaaactcccaaacaaagccta 32859103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38526106 - 38526049
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcc 57  Q
    ||||||||||||||||||||| || ||| ||||||||||||||  |||||||||||||    
T  38526106 tgtcttctatttcttccacttacttcttccttttttccaaaactctcccctcccctcc 38526049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44412282 - 44412353
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||||||||||   ||||| |||||     |||| ||||||||||||||||||||||||    
T  44412282 tgtcttctatttcttccacttgctccttcctattttttcaaaa-----cccttccctcccctccaaactcccaaaca 44412353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 55439537 - 55439485
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||| |||||||||||||||||||| || ||||||||||||||| ||||||||    
T  55439537 tgtcctctatttcttccacttgctcattccttttttccaaaaccctcccctcc 55439485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31178374 - 31178448
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||| || || |||| |||||| ||||||| |||||| ||||  ||||||||||||||||||    
T  31178374 tgtcttctatttcttccatttacttcttcatttttttcaaaaccctcccct-ccctttcctccaaactcccaaaca 31178448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 49683129 - 49683199
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||| |||||||||||| ||| ||||||| ||||||     ||||||||| |||||||||||||||||    
T  49683129 tgtcttctattttttccacttgctcattccttttttctaaaacc-----ctcccctcctctccaaactcccaaaca 49683199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 24242222 - 24242272
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||| |||||||| |||| | ||||||||    
T  24242222 tcttctatttcttccacttgctccttccttttttctaaaatcctcccctcc 24242272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 25428621 - 25428571
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    ||||||||||||||||||| || ||| ||||||||||||||| ||||||||    
T  25428621 tcttctatttcttccacttacttctttcttttttccaaaaccctcccctcc 25428571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 38515202 - 38515152
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    ||||||||||||| |||||||||||| |||||| |||||||| ||||||||    
T  38515202 tcttctatttctttcacttgctccttcctttttaccaaaaccctcccctcc 38515152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 39499416 - 39499462
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  39499416 ccaaagccctcccctcccttcccctccaaactcccaaacaaagccta 39499462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 47789309 - 47789263
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  47789309 ccaaagccctcccctcccttcccctccaaactcccaaacaaagccta 47789263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 55439812 - 55439850
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcctag 83  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  55439812 tcccctcccttcccctccaaactcccaaacaaagcctag 55439850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 3537433 - 3537470
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  3537433 tcccctcccttcccctccaaactcccaaacaaagccta 3537470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 17642478 - 17642441
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  17642478 tccccttccctcccctccaaactcccaaacaaagccta 17642441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 38456523 - 38456486
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  38456523 tcccctcccttcccctccaaactcccaaacaaagccta 38456486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 39115090 - 39115169
Alignment:
Q  6 tctatttcttccacttgctccttctttttt---ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||  |||||||| |||||   ||||| || ||||||||| | |||||||||||| |||||| ||||||    
T  39115090 tctatttcttccacgcgctccttccttttttccccaaagccatcccctccctttccctccaaactcacaaacaaagccta 39115169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 44412017 - 44411972
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||| || ||||||||| ||||||||||||||||||||| |||||    
T  44412017 ccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 44411972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47434446 - 47434503
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcc 57  Q
    |||||||||||||||||| ||| || ||| |||||||||||| | |||||||||||||    
T  47434446 tgtcttctatttcttccatttgttcattccttttttccaaaatcttcccctcccctcc 47434503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 49861054 - 49861099
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||| || ||||||||| ||||||||||||||||||||| |||||    
T  49861054 ccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 49861099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 35283319 - 35283351
Alignment:
Q  50 tcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||| ||||||    
T  35283319 tcccctcccctccaaactcccaaacaaagccta 35283351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 40119020 - 40119093
Alignment:
Q  6 tctatttcttccacttgctccttc---ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||  |||||||   ||||||||||||||     |||||||||||||||||||| |||||| |||||    
T  40119020 tctatttcttccactcactccttccttttttttccaaaacc-----ctcccctcccctccaaactcgcaaacaaagcct 40119093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 46672363 - 46672434
Alignment:
Q  6 tctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||| ||||  |||||| |||| |  ||||||| | |||||||||||||| ||||||    
T  46672363 tctatttcttccacttgcttcttccttttttttcaaaccattcccctctcttcccctccaaactcacaaaca 46672434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 47434158 - 47434118
Alignment:
Q  35 tccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||| ||||||| | |||||||||||||||||||||    
T  47434158 tccaaaaccctcccctctcttcccctccaaactcccaaaca 47434118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 53888718 - 53888750
Alignment:
Q  50 tcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||| ||||||    
T  53888718 tcccctcccctccaaactcccaaacaaagccta 53888750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 54126201 - 54126161
Alignment:
Q  35 tccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||| ||||||||| |||||||||||||| ||||||    
T  54126201 tccaaaaccctcccctcccttcccctccaaactcacaaaca 54126161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 6e-27; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18780335 - 18780254
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  18780335 tgtcttctatttcttccacgtgctccttccttttttccaaaaccctcccctcccctcccctccaaactcccaaacaaagcct 18780254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 31550378 - 31550459
Alignment:
Q  2 gtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  31550378 gtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctccactccaaactcccaaacaaagccta 31550459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12964100 - 12964182
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||||| ||||||    
T  12964100 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctctcctcccctcccaactcccaaacaaagccta 12964182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8991091 - 8991164
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  8991091 tgtcttctatttcttccacttccttctt-ttttttccaaaaccctcccctcccctcccctccaaactcccaaaca 8991164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 14008455 - 14008538
Alignment:
Q  1 tgtcttctatttcttccacttgctccttctttt--ttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||| |||||||||||  |||||||||| ||||||||| ||||||||||||||||||| | ||||||    
T  14008455 tgtcttctatttcttccacttactccttcttttttttccaaaaccctcccctcccttcccctccaaactcccaaagaaagccta 14008538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3039076 - 3039159
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcctag 83  Q
    |||||||||||| |||||||||||||||| |||||| ||||||| || ||||| |||||||||||||||||||||| |||||||    
T  3039076 tgtcttctattttttccacttgctccttcctttttttcaaaaccctctcctcctctcccctccaaactcccaaacaaagcctag 3039159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18018724 - 18018799
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  18018724 tgtcttctatttctttcacttgcttcttccttttttccaaaaccctcccctcccctcccctcgaaactcccaaaca 18018799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 16519221 - 16519297
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||||| |||||| |||||    
T  16519221 tctatttcttccacttgctccttccttttttccaaaaccctcccctctcttcccctccaaactcgcaaacaaagcct 16519297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3119978 - 3120060
Alignment:
Q  1 tgtcttctatttcttccacttgctccttctttt-ttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||| |||||||| |||||||||||| || |||||| ||||||    
T  3119978 tgtcttctatttcttccccttgctcattctttttttccaaaaccctcccctcctctcccctccaaaatctcaaacaaagccta 3120060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 16625914 - 16625984
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||| |||||||||||||| ||||||    
T  16625914 tctatttcttccacttgctccatccttttttccaaaaccctcccctcccttcccctccaaactcgcaaaca 16625984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 25960738 - 25960819
Alignment:
Q  1 tgtcttctatttcttccacttgctcc-ttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||||| ||||||||||||||||| || | || |||||||| |||||||| ||||| |||||    
T  25960738 tgtcttctatttcttccacttgctcctttcttttttccaaaaccctctcatctcctccccttcaaactcctaaacaaagcct 25960819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 30312537 - 30312609
Alignment:
Q  5 ttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||| ||||||||||||||     ||||||||||||||||||||||||||| |||||    
T  30312537 ttctatttcttccacttgctccttccttttttccaaaacc-----ctcccctcccctccaaactcccaaacaaagcct 30312609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 38293837 - 38293761
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||     ||||||||||||||||||||||||||| |||||    
T  38293837 tgtcttctatttcttccacttgctcattccttttttccaaaacc-----ctcccctcccctccaaactcccaaacaaagcct 38293761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 44137105 - 44137029
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||| |||||||||| ||||||||||||||     ||||||||||||||||||||||||||| |||||    
T  44137105 tgtcttctatttcttccatttgctccttccttttttccaaaacc-----ctcccctcccctccaaactcccaaacaaagcct 44137029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 1725859 - 1725800
Alignment:
Q  5 ttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctcc 62  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  1725859 ttctatttcttccacttgctccttcctttttttccaaaaccctcccctcccctcccctcc 1725800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 11514995 - 11514915
Alignment:
Q  3 tcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||| ||| |||||||| || || ||||||||| |||||||||||||| |||||| ||||||    
T  11514995 tcttctatttcttccacttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaacaaagccta 11514915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36567406 - 36567457
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcc 52  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  36567406 tgtcttctatttcttccacttgctccttcttttttccaaaactctcccctcc 36567457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 4003376 - 4003299
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||| ||| ||||||||||| || ||||||||| ||| |||||||||| |||||| ||||||    
T  4003376 tctatttcttccacttgctcattccttttttccaaagccctcccctcccttccactccaaactcacaaacaaagccta 4003299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 10165368 - 10165287
Alignment:
Q  1 tgtcttctatttcttccacttgctccttctttttt-ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||| ||||||||||| |||| ||||| |||||||  |||| ||| |||||||||||||||||||||| |||||    
T  10165368 tgtcttctattttttccacttgcttcttcctttttaccaaaactctcccttcctctcccctccaaactcccaaacaaagcct 10165287  T

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Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8411058 - 8411136
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||| || ||||||||||||  ||||||||||||||     ||||||||||||||||||||||||||| ||||||    
T  8411058 tgtcttctatttcctcaacttgctccttcatttttttccaaaacc-----ctcccctcccctccaaactcccaaacaaagccta 8411136  T

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Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18826360 - 18826412
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  18826360 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 18826412  T

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Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19382831 - 19382758
Alignment:
Q  1 tgtcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||||||| ||||  |||||      |||||||||||||||||||||||||||| |||||    
T  19382831 tgtcttctatttcttccacttgctccttcctttt--caaaa-----acctcccctcccctccaaactcccaaacaaagcct 19382758  T

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Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 6656069 - 6655989
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||| || |||||||||  | || ||||||||| |||||||||||||| || ||| ||||||    
T  6656069 tcttctatttcttccacttgctcattccttttttccttagccttcccctcccttcccctccaaactcgcagacaaagccta 6655989  T

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Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11522294 - 11522369
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||| ||||||||||||| || ||||||| |||||| ||||||| ||||||||  |||||||||||||| ||||||    
T  11522294 tgtcctctatttcttccatttactccttcctttttttcaaaaccctcccctccattcccctccaaactcgcaaaca 11522369  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 42644862 - 42644909
Alignment:
Q  35 tccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||| || |||||| ||||||||||||||||||||||||||||    
T  42644862 tccaaaaccctctcctcccttcccctccaaactcccaaacagagccta 42644909  T

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Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 4041915 - 4041865
Alignment:
Q  3 tcttctatttcttccacttgctccttctt-ttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  4041915 tcttctatttcttccactcgctccttctttttttccaaaaccctcccctcc 4041865  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8555904 - 8555954
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccct 50  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  8555904 tgtcttctatttcttccacttgctccttccttttttcaaaaaccctcccct 8555954  T

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Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 39181027 - 39180958
Alignment:
Q  6 tctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||| |||||| |||||||||||| || ||||||||| ||| |||||||||| ||||||    
T  39181027 tctatttcttccacttactccttccttttttccaaatcc-tcccctcccttcctctccaaactcgcaaaca 39180958  T

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Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 15555475 - 15555548
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||||||| || ||||||||| ||  | ||||||||| | |||||||||||| ||||||    
T  15555475 tcttctatttcttccacttgctcattccttttttcctaagtcttcccctccctttccctccaaactcgcaaaca 15555548  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 32761402 - 32761483
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| ||||||| ||||||||| |||||| |||||| |||| || ||||||||| |||||||||||||| ||| || |||||    
T  32761402 tgtcctctatttattccacttgatccttcattttttacaaagccctcccctcccttcccctccaaactcgcaatcaaagcct 32761483  T

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Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38023573 - 38023625
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||| |||||||||||| |||||||||||| | ||||||||    
T  38023573 tgtcttctatttcttctacttgctccttcattttttccaaaatcctcccctcc 38023625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 43572705 - 43572760
Alignment:
Q  29 cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcctagt 84  Q
    ||||||||| || || ||||||||| |||||||||||||| |||||| ||||||||    
T  43572705 cttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagcctagt 43572760  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 5321903 - 5321937
Alignment:
Q  47 ccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||| |||||||||||||||||||    
T  5321903 ccctcccctcccctcgaaactcccaaacagagcct 5321937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12941928 - 12942010
Alignment:
Q  1 tgtcttctatttcttccacttgctcc-ttcttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||| |||||||||||||||| |||| ||||||||| | ||||| | || ||   |||||||||||||| |||||||||||||    
T  12941928 tgtcctctatttcttccacttactccgttctttttttccaaacccttccatcatttcccctccaaactcacaaacagagccta 12942010  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 34757553 - 34757483
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||| ||| ||||| ||| |||||||| ||||| ||||||||| ||||||||||| || ||||||    
T  34757553 tctatttctttcacctgctcattccttttttcccaaaccttcccctcccttcccctccaaattcgcaaaca 34757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 42644571 - 42644537
Alignment:
Q  47 ccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||| |||||||||||||||||||    
T  42644571 ccctcccctcccctcaaaactcccaaacagagcct 42644537  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 43333499 - 43333465
Alignment:
Q  1 tgtcttctatttcttccacttgctccttctttttt 35  Q
    |||||||||||||||||| ||||||||||||||||    
T  43333499 tgtcttctatttcttccaattgctccttctttttt 43333465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32243428 - 32243371
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcc 57  Q
    |||||||||||||||||  ||||||||| | ||||| ||||||| |||||||||||||    
T  32243428 tgtcttctatttcttcccattgctccttccattttttcaaaaccctcccctcccctcc 32243371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 38216387 - 38216350
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  38216387 tcccctccccttccctccaaactcgcaaacagagccta 38216350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 11950227 - 11950263
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  11950227 tcccctcccctcccctccaaacttccaaacaaagcct 11950263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13766066 - 13766118
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||| ||||||| | ||||||||| ||| ||||||||    
T  13766066 tgtcttctatttcttccactcgctccttccatttttccaataccctcccctcc 13766118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 14008183 - 14008147
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  14008183 tcccctcccttcccctccaaactcccaaacaaagcct 14008147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 16625668 - 16625632
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| |||||||||||||||||||||||||| |||||    
T  16625668 tcccttcccctcccctccaaactcccaaacaaagcct 16625632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 26905750 - 26905682
Alignment:
Q  8 tatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||| ||| |||||||| ||||| |||||||   || ||||||||||| ||||||    
T  26905750 tatttcttccacttgctcattctttttttcccaaaccttcccctcatttctcctccaaactcacaaaca 26905682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 31083030 - 31083062
Alignment:
Q  50 tcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||| ||||||    
T  31083030 tcccctcccctccaaactcccaaacaaagccta 31083062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 81
Target Start/End: Complemental strand, 40357411 - 40357339
Alignment:
Q  11 ttcttccacttgctcctt-cttttttcc-aaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||| ||||||||| |||||  || ||||||||||| ||||||||  |||||| |||||    
T  40357411 ttcttccacttgctccttccttttttccaaaaacactctcctcccctcccatccaaactatcaaacaaagcct 40357339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27499937 - 27499855
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| |||||||||||||| ||||||    
T  27499937 tgtcttctatttcttccacttgctccttcctttttttcaaaaccctcccctcccctccccttcaaactcccaaacaaagccta 27499855  T

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Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26940559 - 26940478
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| |||||| |||||    
T  26940559 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcctctcccctccaaactctcaaacaaagcct 26940478  T

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Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47905817 - 47905898
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  47905817 tgtcttctatttcttccacttactccttccttttttccaaaaccctccccttccctcccctccaaactcccaaacaaagcct 47905898  T

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Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 12293761 - 12293682
Alignment:
Q  3 tcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||||||||| |||||    
T  12293761 tcttctatttcttccacttgatccttccttttttccaaaaccctcccctctcctcccctccaaactcccaaacaaagcct 12293682  T

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Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 51246691 - 51246773
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||| ||||||    
T  51246691 tgtcttctatttctttcacttgctcctttctttttttcaaaaccctctcctcccctcccctccaaactcccaaacaaagccta 51246773  T

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Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13061528 - 13061610
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||| ||||||| ||||||    
T  13061528 tgtcttcaatttcttccacttgctccttccttttttccaaaacccttccctcccctcccctctaaacttccaaacaaagccta 13061610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 50476499 - 50476422
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||| ||||||||||||||     ||||||||||||||||||||||||||| ||||||    
T  50476499 tgtcttctatttcttccacttgctccttccttttttccaaaacc-----ctcccctcccctccaaactcccaaacaaagccta 50476422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40707326 - 40707407
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||||||||| ||||||||||||||  | ||||| | ||||||||||||||||||||| |||||    
T  40707326 tgtcttctatttcttccacttgctccttccttttttccaaaactcttccctctcttcccctccaaactcccaaacaaagcct 40707407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 43572079 - 43572160
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||  | ||||||||||||||||||||||||||||| |||||    
T  43572079 tgtcttctatttcttccacttgctcattcctttttttcaaaactctgccctcccctcccctccaaactcccaaacaaagcct 43572160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 38794921 - 38794841
Alignment:
Q  3 tcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||| |||||||||||||||| |||||| ||||||| ||| |||||||| |||||||||||||||||| ||||||    
T  38794921 tcttctattttttccacttgctccttcctttttttcaaaaccctccactcccctcgcctccaaactcccaaacaaagccta 38794841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 7401659 - 7401730
Alignment:
Q  5 ttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||| ||||||||| ||||||| |||||| |||||||||||||| ||||||||||||||||    
T  7401659 ttctatttcttccacctgctccttccttttttctaaaaccctcccctcccctcccttccaaactcccaaaca 7401730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1688344 - 1688421
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||||||||||| |||||||||||||     ||||||||||||||||||||| ||||||| ||||||    
T  1688344 tgtcttctatttcttccacttgctccttccttttttccaaaa-----ccctcccctcccctccaaacttccaaacaaagccta 1688421  T

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Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 39179250 - 39179315
Alignment:
Q  17 cacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  39179250 cacttgctccttccttttttccaaaaccctcccctcccttcccctccaaactcccaaacaaagcct 39179315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 11017545 - 11017481
Alignment:
Q  8 tatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactccca 71  Q
    |||||||||||||||||||||| |||||||||||| | | |||||||||||||||||||||||||    
T  11017545 tatttcttccacttgctccttccttttttccaaaatccttccctcccctcccctccaaactccca 11017481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 1523547 - 1523465
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||| |||||||||  |||||||||||||| ||  ||||| |||||||||||||| |||||| |||||    
T  1523547 tgtcttctatttcttccacctgctccttcctttttttccaaaaccctcatctcccatcccctccaaactctcaaacaaagcct 1523465  T

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Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 14152653 - 14152583
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||||||| || ||||||||||||||     |||||||||||||||||||||||||||    
T  14152653 tgtcttctatttcttccacttgctccatcattttttccaaaacc-----ctcccctcccctccaaactcccaaaca 14152583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 50247548 - 50247473
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||||| |||||| ||||||| | |||| ||||||||||| |||| ||||||||||||||    
T  50247548 tgtcttctatttcttccacttgttccttccttttttctataaccatcccctccccttcccttcaaactcccaaaca 50247473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 52073575 - 52073657
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| ||||||||||||||||||||||||  |||||| |||| || ||||||||| |||||||||||||| |||||| |||||    
T  52073575 tgtcatctatttcttccacttgctccttcctttttttgcaaacccctcccctcccttcccctccaaactcgcaaacaaagcct 52073657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 17688287 - 17688234
Alignment:
Q  5 ttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcc 57  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  17688287 ttctatttcttccacttgctccttccttttttccaaaaccctcccctcccctcc 17688234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 26757285 - 26757360
Alignment:
Q  3 tcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||| ||||||||||  ||||||||||||||     ||||||||||||||||||||||||||| |||||    
T  26757285 tcttctatttcttccatttgctccttcctttttttccaaaacc-----ctcccctcccctccaaactcccaaacaaagcct 26757360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33991494 - 33991441
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctccc 53  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  33991494 tgtcttctatttcttccacttgctccttcattttttccaaaaccctcccctccc 33991441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 36886818 - 36886741
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||| ||| |||||||| || || ||||||||| |||||||||||||| |||||| ||||||    
T  36886818 tctatttcttccacttgctcattccttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagccta 36886741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39889786 - 39889859
Alignment:
Q  1 tgtcttctatttcttccacttgctccttctt-ttttccaaaaccgtcccctcccctcccctccaaactcccaaa 73  Q
    |||||||||||| |||||||| |||||||   |||||||||||| |||||| ||||||||||||||||||||||    
T  39889786 tgtcttctattttttccacttactccttcccattttccaaaaccctccccttccctcccctccaaactcccaaa 39889859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42488755 - 42488831
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||||| || |||||||||||||     ||||||||| ||||||||||||||||||| |||||    
T  42488755 tgtcttctatttcttccacttgctcattccttttttccaaaa-----ccctccccttccctccaaactcccaaacaaagcct 42488831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23871591 - 23871643
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  23871591 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 23871643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32295597 - 32295541
Alignment:
Q  1 tgtcttctatttcttccacttgctccttctt-ttttccaaaaccgtcccctcccctc 56  Q
    ||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  32295597 tgtcttctatttcttccacttgctccttctttttttccaaaatcttcccctcccctc 32295541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 49103079 - 49103161
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||| |||||||||||||||| ||||| | |||||| | ||||| ||||||||| |||||||||||||| |||||| ||||||    
T  49103079 tgtcctctatttcttccacttactcctccctttttttccaaaccctcccctcccttcccctccaaactcgcaaacatagccta 49103161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 17556621 - 17556540
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| |||||||||||||||| ||||||| |||||| |  |||| ||||||||| |||||||||||||| |||||| |||||    
T  17556621 tgtcctctatttcttccacttactccttcctttttttctgaaccctcccctcccttcccctccaaactcgcaaacaaagcct 17556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 36269691 - 36269614
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||||||| ||| |||||||| || || ||||||| | |||||||||||||| |||||| ||||||    
T  36269691 tctatttcttccacttgctcattccttttttcccaagccttcccctcacttcccctccaaactcgcaaacaaagccta 36269614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 28718924 - 28718995
Alignment:
Q  6 tctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||||||||||||||| ||||  |||||||||||||| ||| ||||  |||||||||||||| ||||||    
T  28718924 tctatttcttccacttgcttcttcctttttttccaaaaccctccactcctttcccctccaaactcgcaaaca 28718995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 938368 - 938441
Alignment:
Q  3 tcttctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||| ||||||  |||||||||||||| |||||| | || ||||||||| |||||||||    
T  938368 tcttctatttcttccacttgatccttcttttttttccaaaaccctccccttctct-ccctccaaagtcccaaaca 938441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13255297 - 13255254
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaacc 43  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  13255297 tgtcttctatttcttccacttgctccttccttttttccaaaacc 13255254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50587001 - 50586934
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaact 67  Q
    |||| ||||||||||||||||||||||| |||||||||||| |  ||| ||||| |||||||||||||    
T  50587001 tgtcctctatttcttccacttgctccttccttttttccaaagctctcctctcccttcccctccaaact 50586934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 8156471 - 8156544
Alignment:
Q  5 ttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||| |||||||||||| |||| || |||||||     ||||||||||||||||||||||||||| ||||||    
T  8156471 ttctatttctttcacttgctcctttctttctttcaaaacc-----ctcccctcccctccaaactcccaaacaaagccta 8156544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 9595778 - 9595824
Alignment:
Q  35 tccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  9595778 tccaaaaccctcccctcccttcccctccaaactcccaaacaaagcct 9595824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 29092035 - 29091958
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||| ||  ||| |||||||| ||||| ||||||||| ||| |||||||||| |||||| ||||||    
T  29092035 tctatttcttccacttacttattcattttttcccaaaccttcccctcccttcctctccaaactcgcaaacaaagccta 29091958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 896636 - 896699
Alignment:
Q  14 ttccacttgctccttctttttt-ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||||||||||| |||||| |     ||||||||||||||||||||||||||| |||||    
T  896636 ttccacttgctccttctttttttccaaaatc-----ctcccctcccctccaaactcccaaacaaagcct 896699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2926062 - 2926110
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtccc 48  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||    
T  2926062 tgtcttctattttttccacttgctccttccttttttccaaaaccctccc 2926110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 42162181 - 42162233
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||| ||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  42162181 tgtcatctatttcttccacttgctccttccttttttccaaaatcctcccctcc 42162233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28773507 - 28773577
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||| |||| |||||| |||| ||| |||||||||||||||     |||||||||||||||||||||||||||    
T  28773507 tgtcttcaattttttccacatgctactttcttttttccaaaacc-----ctcccctcccctccaaactcccaaaca 28773577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 52
Target Start/End: Original strand, 47206538 - 47206577
Alignment:
Q  13 cttccacttgctccttcttttttccaaaaccgtcccctcc 52  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  47206538 cttccacttgctccttcctttttccaaaaccctcccctcc 47206577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 15464029 - 15464075
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||| ||||||||| |||||| |||||||||||||| ||||||    
T  15464029 ccaaaaccctcccctcccttccccttcaaactcccaaacaaagccta 15464075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30538877 - 30538919
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaac 42  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  30538877 tgtcttctatttcttccacttactccttccttttttccaaaac 30538919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 33991760 - 33991806
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  33991760 ccaaagccctcccctcccttcccctccaaactcccaaacaaagccta 33991806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 50247814 - 50247860
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||| ||||||||| ||||||||||||||||||| | ||||||    
T  50247814 ccaaaaccctcccctcccttcccctccaaactcccaaagaaagccta 50247860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 50599094 - 50599164
Alignment:
Q  6 tctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    ||||||| ||||||||||||||| |||||| ||||| |||||||||||  | |||||||||| | ||||||    
T  50599094 tctattttttccacttgctccttcctttttcccaaagccgtcccctccattgccctccaaacccgcaaaca 50599164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 1278383 - 1278350
Alignment:
Q  49 ctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||| ||||||    
T  1278383 ctcccctcccctccaaactcccaaacaaagccta 1278350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 32300273 - 32300318
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||| || ||||||||| ||||||||||||||||||||| |||||    
T  32300273 ccaaagccctcccctcccttcccctccaaactcccaaacaaagcct 32300318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 34154461 - 34154538
Alignment:
Q  6 tctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    |||||||||||||||| ||  ||| |||||||| || || || |||||| |||||||||||||| |||||| ||||||    
T  34154461 tctatttcttccacttacttattccttttttcccaagccttctcctcccttcccctccaaactcgcaaacaaagccta 34154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 39125300 - 39125263
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  39125300 tcccctccccttccctccaaactcccaaacaaagccta 39125263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 2175278 - 2175222
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctccc 58  Q
    ||||||||||||| ||||| |||||| ||| ||||||||| | ||||||||||||||    
T  2175278 tcttctatttctttcacttactcctttcttatttccaaaatcctcccctcccctccc 2175222  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 9173920 - 9173952
Alignment:
Q  48 cctcccctcccctccaaactcccaaacagagcc 80  Q
    |||||||||||||||||||| ||||||||||||    
T  9173920 cctcccctcccctccaaacttccaaacagagcc 9173952  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 17760608 - 17760679
Alignment:
Q  6 tctatttcttccacttgctccttcttttt--tccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||  ||||||||  ||| || || ||||||||| |||||||||| ||| ||||||    
T  17760608 tctatttcttccacttgcttattcttttttatcccaagccttcccctcccttcccctccaagctcgcaaaca 17760679  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 32299330 - 32299366
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  32299330 tcccctcccttcccctccaaactcccaaacaaagcct 32299366  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 38795192 - 38795228
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  38795192 tcccctcccttcccctccaaactcccaaacaaagcct 38795228  T

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Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 39508995 - 39509031
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||| |||||||||||||||||||||||||| |||||    
T  39508995 tcccttcccctcccctccaaactcccaaacaaagcct 39509031  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 45565348 - 45565392
Alignment:
Q  37 caaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||| ||||||||| |||||||||||||| |||||| |||||    
T  45565348 caaaaccctcccctcccttcccctccaaactcgcaaacaaagcct 45565392  T

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Target: scaffold0028 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 35582 - 35663
Alignment:
Q  1 tgtcttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||| |||||||| |||||||| |||||    
T  35582 tgtcttctatttctttcacttgctccttccttttttccaaaaccctcccctcgcctcctctccaaacacccaaacaaagcct 35663  T

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Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 35318 - 35272
Alignment:
Q  36 ccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  35318 ccaaagccctcccctcccttcccctccaaactcccaaacaaagccta 35272  T

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Target: scaffold0952 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3800 - 3852
Alignment:
Q  1 tgtcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcc 52  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  3800 tgtcttctatttcttccacttgctccttccttttttccaaaaccctcccctcc 3852  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 82744 - 82666
Alignment:
Q  6 tctatttcttccacttgctccttc--ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||  ||||||||||| || ||||||||| | |||||||||||| |||| | ||||||    
T  82744 tctatttcttccacttgctccttcctttttttccaaagccctcccctcccttaccctccaaactcacaaagaaagccta 82666  T

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Target: scaffold1562 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 87 - 29
Alignment:
Q  5 ttctatttcttccacttgctccttctt-ttttccaaaaccgtcccctcccctcccctcc 62  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||| |||||||||||||    
T  87 ttctatttcttccacttgctccttctttttttctaaaaccctcccttcccctcccctcc 29  T

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Target: scaffold1163 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1163
Description:

Target: scaffold1163; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 2009 - 1931
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcc 80  Q
    |||||||||||||||||||||||||| ||||||| ||||  | |||| |||| |||||||||||||| |||||| ||||    
T  2009 tcttctatttcttccacttgctccttcctttttttcaaagtcttcccttcccttcccctccaaactcgcaaacaaagcc 1931  T

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Target: scaffold1158 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 2506 - 2564
Alignment:
Q  5 ttctatttcttccacttgctccttc-ttttttccaaaaccgtcccctcccctcccctcc 62  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||    
T  2506 ttctatttcttccacttgctccttctttttttctaaaaccctcccttcccctcccctcc 2564  T

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Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 2152 - 2231
Alignment:
Q  3 tcttctatttcttccacttgctcctt-cttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    ||||||||||||||||||||||| || ||||||||  || || ||||||||| |||||||||||||  |||||| |||||    
T  2152 tcttctatttcttccacttgctcattccttttttcttaagccttcccctcccttcccctccaaacttgcaaacaaagcct 2231  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 59708 - 59671
Alignment:
Q  45 tcccctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  59708 tcccctcccctcccctccaaactcccaaacaaagccta 59671  T

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Target: scaffold0717 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Complemental strand, 1534 - 1483
Alignment:
Q  30 ttttttccaaaaccgtcccctcccctcccctccaaactcccaaacagagcct 81  Q
    |||||||||||||  |||||||||||||||||||||||| || ||| |||||    
T  1534 ttttttccaaaactctcccctcccctcccctccaaactctcatacaaagcct 1483  T

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Target: scaffold0245 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 4060 - 4027
Alignment:
Q  49 ctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||| ||||||    
T  4060 ctcccctcccctccaaactcccaaacaaagccta 4027  T

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Target: scaffold0229 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 4391 - 4358
Alignment:
Q  49 ctcccctcccctccaaactcccaaacagagccta 82  Q
    ||||||||||||||||||||||||||| ||||||    
T  4391 ctcccctcccctccaaactcccaaacaaagccta 4358  T

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Target: scaffold0248 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 328 - 399
Alignment:
Q  6 tctatttcttccacttgctccttctttttt--ccaaaaccgtcccctcccctcccctccaaactcccaaaca 75  Q
    |||||||||||||||||||  |||||||||  || || |  ||||||||| |||||||||||||| ||||||    
T  328 tctatttcttccacttgcttattcttttttatcccaagctttcccctcccttcccctccaaactcgcaaaca 399  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 107809 - 107861
Alignment:
Q  3 tcttctatttcttccacttgctccttcttttttccaaaaccgtcccctcccct 55  Q
    |||||||||||||| |||| ||||||| ||||| | ||||| |||||||||||    
T  107809 tcttctatttcttcaacttactccttccttttttccaaaccctcccctcccct 107861  T

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