View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5628_low_6 (Length: 408)
Name: NF5628_low_6
Description: NF5628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5628_low_6 |
 | |
|
| [»] chr7 (21 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 408
Target Start/End: Original strand, 22879372 - 22879779
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22879372 |
acacaacaaaccaagtttcaacaccaattccacctcttcagacacataatctgtccccaaatttacatcttttgcctcaagaatatcacctcttttccaa |
22879471 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
||||||||||||| |||||| | ||||| || |||| ||| |||||| | | ||||||| | |||||| ||||||||||||||||||||||||||| |
|
|
| T |
22879472 |
cactcaaacacactatcaaccaaaattacacattcattttcccctacattagcaataggccctcttccacaagcaacctcaagaagaaatgcaccaaaag |
22879571 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatctgcatt |
300 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22879572 |
aaaacatatcagaaaatttagtcgccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttttgtgaggatctgcatt |
22879671 |
T |
|
| Q |
301 |
gaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaacacct |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
22879672 |
gaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccatttttcatgaagataaaccacacctgaagcaacacct |
22879771 |
T |
|
| Q |
401 |
ttgatgat |
408 |
Q |
| |
|
|||||||| |
|
|
| T |
22879772 |
ttgatgat |
22879779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 22838787 - 22839080
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22838787 |
acacaacaatccaagtttcaacaccaactccacctcttcagacacataatctgtccccaaatttacatcttttgcctcaagaatatcacctcttttccaa |
22838886 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22838887 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctcctaccacaaacaacctcaagaagaaatgcaccaaaag |
22838986 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatc |
294 |
Q |
| |
|
|||| | ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||||| ||||||||||| |
|
|
| T |
22838987 |
aaaacacatcagaaaatttagtagccttacctgttctaatatgatcaggagcaagataaccaaaagttccaaccaaatgagtagtgtgaggatc |
22839080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 22808355 - 22808652
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||||||||||| ||| || |||| |||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
22808355 |
acacaacaagccaagtttcaacaccaattcaacctcttcagacacataatttgttcctaaatatacatcttttgcctcaagaatttcacctcttttccaa |
22808454 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|| ||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22808455 |
cattcaaacacataatcaactagaattagactctcattttctcccacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
22808554 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatctgca |
298 |
Q |
| |
|
|||| | ||||||||||||||| |||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
22808555 |
aaaacacatcagaaaatttagtagccttacctgttctaatatgctcaggggcaagataaccaatagttccaaccaaatgagttgtgtgaggatctgca |
22808652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 22829766 - 22830063
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||| |||||||| |||||||||| |||| |
|
|
| T |
22829766 |
acacaacaatccaagtttcaacaccaactcgacctcctcagacacataatcagtgcccaaatttacatcttttgcctcaagaatctcacctctttgccaa |
22829865 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|| ||||||||| |||||||||||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22829866 |
cattcaaacacataatcaactagaattagactctcattgtctcctacacggcctagaggcctcctaccacaaacaacctcaagaagaaatgcaccaaaag |
22829965 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatctgca |
298 |
Q |
| |
|
|||| | |||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22829966 |
aaaacacatcagaaaattttgtagccttacctgttctaatatgttcaggagcaagataaccaatagttccagccaaatgagttgtgtgaggatctgca |
22830063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 22813762 - 22814059
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22813762 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatttgtccccaaatttacatcttttgcctcaagaatatcacctcttttccaa |
22813861 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|||||||| ||||||||||| | ||||| ||| |||| ||| || ||| | |||||||| | ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22813862 |
cactcaaatacacaatcaaccaaaattacactttcattttccccaacattagaaataggccttctaccacaagcaacctcaagaagaaatgcaccaaaag |
22813961 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatctgca |
298 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22813962 |
aaaacatatcagaaaatttagtggccttacctgttctaatatgttcaggagcaagataaccaattgttccagccaaatgagttgtgtgaggatctgca |
22814059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 22888033 - 22888326
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||||||||||||||||| ||| || |||| ||||||||||| |||||||| |||||||||| |||| |
|
|
| T |
22888033 |
acacaacaagccaagtttcaacaccaattccacctcttcagacacataatttgttcctaaatgaacatcttttgcctcaagaatctcacctctttgccaa |
22888132 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22888133 |
cattcaaacacagaatcaactagaattagactctcattgtctcctacacgacctataggcctcctaccacaaacaacctcaagaagaaatgcaccaaaag |
22888232 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatc |
294 |
Q |
| |
|
|||| | ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22888233 |
aaaacacatcagaaaatttagtagccttacctcttctaatatgttcaggagcaagataaccaatagttccagccaaatgagttgtgtgaggatc |
22888326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 22804071 - 22804364
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||| ||| ||||||||||||||||| || ||||||||||||||||||| ||| || |||| ||||||||| || |||||||| |||||||||||| || |
|
|
| T |
22804071 |
acacatcaagccaagtttcaacaccaattccacctcttcagacacataatttgttcctaaatatacatctttagcctcaagaatttcacctcttttcaaa |
22804170 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22804171 |
cattcaaacacatgatcaactagaactagactctcattctctcctacacgacctataggcctcctaccacaaacaacctcaagaagaaatgcaccaaaag |
22804270 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatc |
294 |
Q |
| |
|
|||| | ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||||| ||||||||||| |
|
|
| T |
22804271 |
aaaacacatcagaaaatttagtagccttacctgttctaatatgatcaggagcaagataaccaaaagttccaaccaaatgagtagtgtgaggatc |
22804364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 298
Target Start/End: Original strand, 22892688 - 22892985
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22892688 |
acacaacaatccaagtttcaacaccaactccacctcttcagacacaaagtttgtccccaaatttacatcttttgcctcaagaatatcacctcttttccaa |
22892787 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|||||||| ||||||||||| | ||||| ||| |||| ||| || ||| | |||||||| | ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22892788 |
cactcaaatacacaatcaaccaaaattacactttcattttccccaacattagaaataggccttctaccacaagcaacctcaagaagaaatgcaccaaaag |
22892887 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatctgca |
298 |
Q |
| |
|
|||| | ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
22892888 |
aaaacacatcagaaaatttagtagccttacctgttctaatatgttccggagcaagataaccaatagttccagccaaatgagtcgtgtgatgatctgca |
22892985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 22874663 - 22874956
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||||||| ||||||||||| ||||| || ||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22874663 |
acacaacaatccaagtttcaaaaccaattccacctcttcagacacataatttgtcccaaaatttacatcttttgcctcaagaatatcacctcttttccaa |
22874762 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|||||||| ||||||||||| | ||||| || |||| ||| |||||| | |||||||| | ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22874763 |
cactcaaatacacaatcaaccaaaattacacattcattttcccctacattggcaataggccttctaccacaagcaacctcaagaagaaatgcaccaaaag |
22874862 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatc |
294 |
Q |
| |
|
|||| | ||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22874863 |
aaaacacatcagaaaatttagtagccttaccagttctaatatgttccggagcaagataaccaatagttccagccaaatgagttgtgtgaggatc |
22874956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 22897004 - 22897297
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
22897004 |
acacaacaaaccaagtttcaacaccaattcaacctcttcagacacatagtttgtccccaaatttacatcttttgcctcaagaatattaccccttttccaa |
22897103 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|||||||| ||||||||||| | ||||| | |||| ||| ||||| | |||||||| | ||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
22897104 |
cactcaaagacacaatcaaccaaaattacgcattcattttccgctacattttcaataggccttctaccacaagcaacctcgagaagaaatgcaccaaaag |
22897203 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatc |
294 |
Q |
| |
|
|||| | ||||||||||||||| ||||||||||||||| |||||||| | || ||||| || | ||||||| |||||||||||||||||||||| |
|
|
| T |
22897204 |
aaaacacatcagaaaatttagtagccttacctgttctagtatgttcaggtgctagataccctacagttccaaccaaatgagttgtgtgaggatc |
22897297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 22814102 - 22814214
Alignment:
| Q |
296 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
395 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22814102 |
gcattaaattcagaatctaataacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
22814201 |
T |
|
| Q |
396 |
cacctttgatgat |
408 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22814202 |
cacctttgatgat |
22814214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 22839127 - 22839239
Alignment:
| Q |
296 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
395 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22839127 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccaaacctgaagcaa |
22839226 |
T |
|
| Q |
396 |
cacctttgatgat |
408 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22839227 |
cacctttgatgat |
22839239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 22804411 - 22804523
Alignment:
| Q |
296 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
395 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
22804411 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcgtgaagataaaccacagctgaagcaa |
22804510 |
T |
|
| Q |
396 |
cacctttgatgat |
408 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22804511 |
cacctttgatgat |
22804523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 22888373 - 22888485
Alignment:
| Q |
296 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
395 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22888373 |
gcattaaatccagaatctaacaacacattactagcctttatgtctctatgaataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
22888472 |
T |
|
| Q |
396 |
cacctttgatgat |
408 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22888473 |
cacctttgatgat |
22888485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 22893028 - 22893140
Alignment:
| Q |
296 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
395 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22893028 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatgaattacaactttctcccattcttcatgaagataaaccacgcctgaagcaa |
22893127 |
T |
|
| Q |
396 |
cacctttgatgat |
408 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22893128 |
cacctttgatgat |
22893140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 22875003 - 22875115
Alignment:
| Q |
296 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
395 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
22875003 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatgaatcacaactttttcccattcttcatgtagataaaccaaacctgaagcaa |
22875102 |
T |
|
| Q |
396 |
cacctttgatgat |
408 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22875103 |
cacctttgatgat |
22875115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 22808695 - 22808807
Alignment:
| Q |
296 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
395 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||| ||| || |||||||||||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
22808695 |
gcattaaattcagaatctaacaacacattactagcctttatgtctcgatgaattacaactttctcccattcttcgtgtagataaaccacacctgacgcaa |
22808794 |
T |
|
| Q |
396 |
cacctttgatgat |
408 |
Q |
| |
|
||||||||||||| |
|
|
| T |
22808795 |
cacctttgatgat |
22808807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 302 - 408
Target Start/End: Original strand, 22830112 - 22830218
Alignment:
| Q |
302 |
aattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaacacctt |
401 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| || ||||||||||||||||| |||| ||||| |
|
|
| T |
22830112 |
aattcagaatctaacaacacattactagcctttatgtctctatgaatcacaactttctcccattcttcgtgtagataaaccacacctgacgcaatacctt |
22830211 |
T |
|
| Q |
402 |
tgatgat |
408 |
Q |
| |
|
||||||| |
|
|
| T |
22830212 |
tgatgat |
22830218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 22912754 - 22912852
Alignment:
| Q |
310 |
atctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaacacctttgatgat |
408 |
Q |
| |
|
|||||| || |||||||||||||| ||||||||||| |||||||||| |||||||||||||| | ||||| || ||| |||||||||||||| ||||| |
|
|
| T |
22912754 |
atctaataaaacattactagctttaatgtctctatgaataacaacttgttcccattcttcatgtaaataaaacaaaccagaagcaacacctttaatgat |
22912852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 408
Target Start/End: Original strand, 22897345 - 22897456
Alignment:
| Q |
297 |
cattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaac |
396 |
Q |
| |
|
|||| |||||| |||||| |||||||| ||||| |||||||||||||| || ||||| | |||||||||||| || ||||||| || ||| ||||||| |
|
|
| T |
22897345 |
cattcaattcaccatctaataacacattgctagcctttatgtctctatgaatcacaacctgctcccattcttcgtgtagataaaacaaacccaaagcaac |
22897444 |
T |
|
| Q |
397 |
acctttgatgat |
408 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22897445 |
acctttgatgat |
22897456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 22912398 - 22912529
Alignment:
| Q |
5 |
aacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaacact |
104 |
Q |
| |
|
||||||||||||||||| ||||| ||||| |||||| ||||||||| || ||||| |||||||| || |||| ||| ||||||||||||||||| | |
|
|
| T |
22912398 |
aacaaaccaagtttcaaaaccaattcaacttcttcaaccacataatccacacctaaattcacatctttagcctcaataatctcacctcttttccaacaat |
22912497 |
T |
|
| Q |
105 |
caaacacacaatcaactagaattagactctca |
136 |
Q |
| |
|
|| | ||| ||||||| | ||||| ||||||| |
|
|
| T |
22912498 |
cataaacataatcaaccaaaattatactctca |
22912529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 21151979 - 21151682
Alignment:
| Q |
1 |
acacaacaaaccaagtttcaacaccaactcaacctcttcagacacataatctgtccccaaatttacatcttttgcatcaagaatatcacctcttttccaa |
100 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||||||||||||||| | ||| || |||| | |||||||||| |||||||| ||||||||||||||| |
|
|
| T |
21151979 |
acacaacaagccaagtttcaacaccaattccacctcttcagacacatattttgttcctaaatatgcatcttttgcctcaagaatttcacctcttttccaa |
21151880 |
T |
|
| Q |
101 |
cactcaaacacacaatcaactagaattagactctcatattctcctacacgacctataggcctccgaccacaaacaacctcaagaagaaatgcaccaaaag |
200 |
Q |
| |
|
|| ||||||||| |||||||||||||||||||||| | ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
21151879 |
cattcaaacacataatcaactagaattagactctcgttgtctccgacatgacctataggcctcctaccacaaacaacctcaagaagaaatgcaccaaaag |
21151780 |
T |
|
| Q |
201 |
aaaatatatcagaaaatttagtggccttacctgttctaatatgttcatgagcaagataaccaatagttccagccaaatgagttgtgtgaggatctgca |
298 |
Q |
| |
|
|||| | ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21151779 |
aaaacacatcagaagatttagtagccttacctgttctaatatgttccggagcaagataaccaatagttccagccaaatgagttgtgtgaggatctgca |
21151682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 296 - 408
Target Start/End: Complemental strand, 21151639 - 21151527
Alignment:
| Q |
296 |
gcattgaattcagaatctaacaacacattactagcttttatgtctctatggataacaactttctcccattcttcatgaagataaaccacacctgaagcaa |
395 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
21151639 |
gcattaaattcagaatctaacaacacattactagcttttatgtctctatgaattacaactttctcccattcttcatgtagataaaccacacttgaagcaa |
21151540 |
T |
|
| Q |
396 |
cacctttgatgat |
408 |
Q |
| |
|
||||||||||||| |
|
|
| T |
21151539 |
cacctttgatgat |
21151527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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