View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5629_high_36 (Length: 303)

Name: NF5629_high_36
Description: NF5629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5629_high_36
NF5629_high_36
[»] chr7 (1 HSPs)
chr7 (9-303)||(10324531-10324824)


Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 9 - 303
Target Start/End: Complemental strand, 10324824 - 10324531
Alignment:
Q  9 agataattctggatttcaaattttgtttgaaacatattttccatcgtaaatattgctatttccttcattatttgattgcttgttggtttctgcattgaac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10324824 agataattctggatttcaaattttgtttgaaacatattttccatcgtaaatattgctgtttccttcattatttgattgcttgttggtttctgcattgaac 10324725  T
Q  109 atggaaatattattggctgctaccatatttttgcttgttcatttttgtgatttaacactttccgttacaattttgctcttacatgaaatcacagtattat 208  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10324724 atggaaatattattggctgccaccatattttggcttgttcatttttgtgatttaacactttccgttacaattttgctcttacctgaaatcacagtattat 10324625  T
Q  209 tgtattccctttctggaaacttgcatctttcaatctttccttgtcttatcggaaatcaaacgataggaagcagtttgaaacaactaccatatgtt 303  Q
    ||||||||||||||| |||||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  10324624 tgtattccctttctgtaaacttgcatctgtcaatctttccttgtcctatcgggaatcaaacgaaaggaagcagtttg-aacaactaccatatgtt 10324531  T

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