View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5629_high_55 (Length: 240)

Name: NF5629_high_55
Description: NF5629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5629_high_55
NF5629_high_55
[»] chr1 (67 HSPs)
chr1 (35-240)||(47255443-47255648)
chr1 (34-240)||(11348557-11348763)
chr1 (34-240)||(29136106-29136312)
chr1 (34-240)||(37033176-37033382)
chr1 (36-240)||(193472-193676)
chr1 (34-240)||(37168156-37168362)
chr1 (34-240)||(37879014-37879220)
chr1 (34-240)||(13547192-13547398)
chr1 (34-240)||(47115030-47115236)
chr1 (34-240)||(34603435-34603641)
chr1 (34-240)||(13549103-13549309)
chr1 (34-240)||(42298078-42298284)
chr1 (36-240)||(19752546-19752751)
chr1 (34-240)||(31925810-31926015)
chr1 (34-240)||(19754350-19754560)
chr1 (34-240)||(7482334-7482539)
chr1 (34-171)||(28242247-28242385)
chr1 (130-240)||(10925177-10925288)
chr1 (130-240)||(31659192-31659303)
chr1 (135-240)||(49918309-49918415)
chr1 (130-240)||(4552740-4552851)
chr1 (130-240)||(37503657-37503768)
chr1 (130-240)||(50169313-50169424)
chr1 (148-240)||(3156837-3156930)
chr1 (130-240)||(197011-197122)
chr1 (130-240)||(28265657-28265768)
chr1 (130-240)||(44455114-44455225)
chr1 (34-122)||(34602561-34602648)
chr1 (130-240)||(834270-834381)
chr1 (130-236)||(3847228-3847335)
chr1 (130-240)||(8550890-8551001)
chr1 (130-240)||(13138079-13138188)
chr1 (130-240)||(15820261-15820372)
chr1 (130-240)||(28220329-28220440)
chr1 (141-240)||(41360880-41360979)
chr1 (130-221)||(1833476-1833568)
chr1 (130-240)||(23555368-23555479)
chr1 (130-240)||(46064872-46064983)
chr1 (130-240)||(50167278-50167389)
chr1 (140-240)||(28223524-28223625)
chr1 (131-240)||(928079-928190)
chr1 (130-240)||(3189285-3189395)
chr1 (130-240)||(3198102-3198212)
chr1 (130-240)||(3206941-3207051)
chr1 (130-240)||(13659439-13659550)
chr1 (130-240)||(40122301-40122412)
chr1 (130-240)||(20762626-20762737)
chr1 (130-240)||(37559971-37560083)
chr1 (34-127)||(41135679-41135771)
chr1 (130-240)||(45644457-45644569)
chr1 (34-240)||(22079181-22079381)
chr1 (140-240)||(16455586-16455686)
chr1 (130-239)||(30476550-30476662)
chr1 (148-239)||(37282796-37282887)
chr1 (131-240)||(8871151-8871259)
chr1 (47-175)||(6808319-6808446)
chr1 (175-240)||(13316455-13316520)
chr1 (179-240)||(36683694-36683755)
chr1 (131-239)||(44650267-44650376)
chr1 (189-239)||(3460709-3460760)
chr1 (49-127)||(3331428-3331503)
chr1 (190-240)||(12318626-12318676)
chr1 (34-105)||(12318720-12318790)
chr1 (148-239)||(44646888-44646980)
chr1 (175-240)||(9987202-9987266)
chr1 (175-240)||(20622342-20622406)
chr1 (60-132)||(10157501-10157571)
[»] chr2 (46 HSPs)
chr2 (34-237)||(1631838-1632041)
chr2 (34-240)||(35446987-35447193)
chr2 (34-240)||(45726788-45726994)
chr2 (34-239)||(42288214-42288419)
chr2 (34-239)||(17450450-17450655)
chr2 (38-240)||(24397921-24398122)
chr2 (130-239)||(36318113-36318223)
chr2 (130-240)||(34139874-34139985)
chr2 (130-239)||(17057473-17057583)
chr2 (130-239)||(17085456-17085566)
chr2 (37-240)||(33648032-33648236)
chr2 (130-240)||(36773516-36773627)
chr2 (130-240)||(723847-723958)
chr2 (130-240)||(11690455-11690566)
chr2 (130-240)||(14633929-14634040)
chr2 (130-240)||(29867823-29867934)
chr2 (130-240)||(33162553-33162664)
chr2 (130-240)||(42362306-42362417)
chr2 (130-240)||(2334521-2334631)
chr2 (130-240)||(38312194-38312305)
chr2 (130-240)||(11067259-11067370)
chr2 (130-240)||(11151694-11151805)
chr2 (130-240)||(24885615-24885726)
chr2 (130-219)||(39284839-39284929)
chr2 (130-240)||(45099709-45099820)
chr2 (130-240)||(5723359-5723468)
chr2 (145-240)||(6595109-6595206)
chr2 (131-240)||(13121724-13121834)
chr2 (148-240)||(36205767-36205860)
chr2 (148-240)||(36988179-36988272)
chr2 (130-240)||(4503235-4503346)
chr2 (130-240)||(14202508-14202621)
chr2 (119-240)||(7815376-7815498)
chr2 (130-240)||(4484434-4484544)
chr2 (131-240)||(11049505-11049618)
chr2 (169-240)||(26353178-26353249)
chr2 (134-240)||(12123688-12123794)
chr2 (148-240)||(30833317-30833410)
chr2 (35-240)||(30218148-30218342)
chr2 (150-240)||(17490251-17490336)
chr2 (175-240)||(32289565-32289628)
chr2 (119-194)||(5700271-5700347)
chr2 (195-239)||(41446159-41446203)
chr2 (195-240)||(41454254-41454299)
chr2 (196-240)||(42261589-42261633)
chr2 (34-122)||(43731007-43731092)
[»] chr8 (51 HSPs)
chr8 (34-240)||(11383845-11384050)
chr8 (35-240)||(42435094-42435299)
chr8 (36-240)||(4283385-4283589)
chr8 (34-240)||(40221604-40221810)
chr8 (34-240)||(18655260-18655465)
chr8 (34-240)||(40328638-40328844)
chr8 (34-240)||(44353651-44353858)
chr8 (130-240)||(27811232-27811343)
chr8 (130-240)||(4731612-4731723)
chr8 (130-240)||(15212740-15212851)
chr8 (130-240)||(43036377-43036488)
chr8 (118-240)||(10930302-10930424)
chr8 (131-240)||(18141776-18141885)
chr8 (131-240)||(30291561-30291672)
chr8 (141-240)||(19491802-19491901)
chr8 (130-240)||(33352104-33352215)
chr8 (130-240)||(30143296-30143405)
chr8 (140-240)||(1292566-1292667)
chr8 (117-240)||(1345474-1345597)
chr8 (130-240)||(40321034-40321145)
chr8 (130-240)||(9765703-9765810)
chr8 (130-236)||(4743311-4743417)
chr8 (130-240)||(5689225-5689336)
chr8 (131-240)||(42498149-42498259)
chr8 (130-240)||(1746321-1746432)
chr8 (130-240)||(12702737-12702852)
chr8 (130-240)||(3303773-3303884)
chr8 (130-240)||(6598926-6599037)
chr8 (130-240)||(6674379-6674490)
chr8 (130-240)||(10929753-10929864)
chr8 (130-240)||(18106181-18106292)
chr8 (130-240)||(41366717-41366828)
chr8 (130-240)||(31218211-31218322)
chr8 (130-240)||(44303808-44303920)
chr8 (148-240)||(3772164-3772257)
chr8 (130-240)||(17982607-17982718)
chr8 (130-240)||(19945463-19945574)
chr8 (131-240)||(8965794-8965904)
chr8 (130-240)||(34254434-34254543)
chr8 (150-240)||(34256610-34256700)
chr8 (130-240)||(41364950-41365061)
chr8 (130-240)||(4162454-4162562)
chr8 (49-121)||(40585599-40585669)
chr8 (165-240)||(1822282-1822357)
chr8 (165-240)||(1856727-1856802)
chr8 (51-240)||(33655408-33655596)
chr8 (131-210)||(8153717-8153798)
chr8 (49-127)||(10020321-10020396)
chr8 (175-240)||(2627735-2627799)
chr8 (196-239)||(3231900-3231944)
chr8 (197-240)||(10240175-10240219)
[»] chr7 (64 HSPs)
chr7 (34-240)||(34310819-34311025)
chr7 (34-240)||(2390141-2390347)
chr7 (34-240)||(2361075-2361280)
chr7 (34-240)||(6431830-6432036)
chr7 (34-240)||(48599437-48599643)
chr7 (33-240)||(4508809-4509016)
chr7 (34-240)||(22269832-22270038)
chr7 (34-240)||(29608595-29608802)
chr7 (34-240)||(4512493-4512699)
chr7 (33-240)||(4510651-4510858)
chr7 (34-239)||(3258855-3259059)
chr7 (36-240)||(8359420-8359625)
chr7 (34-182)||(6360073-6360221)
chr7 (130-240)||(47674046-47674157)
chr7 (131-240)||(30024835-30024945)
chr7 (130-240)||(31733072-31733183)
chr7 (130-240)||(43864198-43864309)
chr7 (130-240)||(47676239-47676350)
chr7 (130-240)||(1113611-1113722)
chr7 (130-240)||(48491533-48491644)
chr7 (130-239)||(4586115-4586225)
chr7 (130-240)||(26417270-26417381)
chr7 (130-240)||(27347771-27347882)
chr7 (130-239)||(38671326-38671436)
chr7 (129-240)||(4538643-4538755)
chr7 (130-240)||(12097962-12098073)
chr7 (130-240)||(14069936-14070047)
chr7 (130-240)||(14379964-14380075)
chr7 (130-240)||(18126598-18126709)
chr7 (130-240)||(31105496-31105607)
chr7 (131-240)||(36146510-36146621)
chr7 (34-240)||(22328494-22328707)
chr7 (133-240)||(31518752-31518860)
chr7 (130-240)||(8153296-8153407)
chr7 (130-240)||(41317537-41317648)
chr7 (130-240)||(48489385-48489496)
chr7 (130-240)||(23554994-23555105)
chr7 (130-240)||(24525999-24526111)
chr7 (130-240)||(496086-496197)
chr7 (130-240)||(35853869-35853979)
chr7 (130-228)||(41649125-41649224)
chr7 (131-240)||(4253632-4253742)
chr7 (130-240)||(4178729-4178839)
chr7 (131-240)||(23565164-23565274)
chr7 (130-240)||(25767064-25767171)
chr7 (130-240)||(29991009-29991118)
chr7 (130-240)||(48408757-48408867)
chr7 (135-240)||(23343934-23344040)
chr7 (131-239)||(5514113-5514222)
chr7 (130-206)||(2761439-2761516)
chr7 (130-240)||(19502132-19502243)
chr7 (35-240)||(1360256-1360462)
chr7 (179-240)||(25615857-25615918)
chr7 (131-240)||(36574619-36574728)
chr7 (175-227)||(39731369-39731420)
chr7 (201-240)||(2759300-2759339)
chr7 (130-186)||(24514918-24514974)
chr7 (189-235)||(31518917-31518963)
chr7 (34-91)||(5116494-5116550)
chr7 (207-240)||(32358157-32358190)
chr7 (175-240)||(43504259-43504323)
chr7 (49-132)||(23794039-23794119)
chr7 (195-239)||(43363578-43363622)
chr7 (34-94)||(43363664-43363723)
[»] chr5 (48 HSPs)
chr5 (34-240)||(40147120-40147326)
chr5 (34-240)||(38746864-38747070)
chr5 (34-240)||(213328-213530)
chr5 (37-240)||(5057909-5058110)
chr5 (34-237)||(27015391-27015593)
chr5 (34-240)||(28278175-28278381)
chr5 (34-240)||(27637716-27637925)
chr5 (33-240)||(16641040-16641250)
chr5 (130-240)||(42426338-42426449)
chr5 (130-239)||(533723-533833)
chr5 (130-240)||(8566049-8566160)
chr5 (130-240)||(13488157-13488268)
chr5 (130-240)||(33831634-33831745)
chr5 (130-240)||(39468652-39468763)
chr5 (130-240)||(42428533-42428644)
chr5 (130-240)||(19806338-19806447)
chr5 (133-240)||(537982-538090)
chr5 (130-240)||(5887519-5887630)
chr5 (130-240)||(13239706-13239816)
chr5 (130-240)||(28750758-28750869)
chr5 (130-240)||(32636778-32636889)
chr5 (34-155)||(4160492-4160611)
chr5 (130-240)||(16452035-16452145)
chr5 (130-240)||(13343015-13343126)
chr5 (130-240)||(3075761-3075872)
chr5 (130-240)||(25412716-25412825)
chr5 (130-240)||(31182927-31183037)
chr5 (148-240)||(30182560-30182653)
chr5 (130-240)||(36074145-36074258)
chr5 (149-240)||(42310038-42310130)
chr5 (130-240)||(30683027-30683134)
chr5 (33-240)||(35616029-35616234)
chr5 (33-240)||(316622-316827)
chr5 (131-240)||(13695794-13695904)
chr5 (38-133)||(14689622-14689715)
chr5 (34-85)||(33906288-33906338)
chr5 (131-240)||(9049445-9049554)
chr5 (175-240)||(16409475-16409539)
chr5 (130-186)||(42926847-42926904)
chr5 (188-239)||(30802842-30802892)
chr5 (175-240)||(26177883-26177946)
chr5 (51-132)||(8019464-8019542)
chr5 (175-240)||(18441752-18441816)
chr5 (46-122)||(21205874-21205949)
chr5 (148-240)||(37439105-37439206)
chr5 (195-238)||(10700753-10700796)
chr5 (175-240)||(26170774-26170837)
chr5 (175-240)||(9789328-9789392)
[»] chr4 (71 HSPs)
chr4 (34-240)||(54882879-54883085)
chr4 (37-240)||(2209575-2209778)
chr4 (34-240)||(6655815-6656021)
chr4 (34-240)||(50673950-50674155)
chr4 (34-239)||(12073251-12073456)
chr4 (34-239)||(41964274-41964479)
chr4 (35-240)||(55085468-55085673)
chr4 (34-240)||(35662301-35662506)
chr4 (64-240)||(40632334-40632510)
chr4 (34-240)||(8665266-8665473)
chr4 (34-240)||(379238-379445)
chr4 (34-240)||(27417068-27417270)
chr4 (34-240)||(46703359-46703565)
chr4 (34-240)||(50262804-50263007)
chr4 (34-240)||(8647997-8648204)
chr4 (34-240)||(12119398-12119604)
chr4 (94-240)||(41639345-41639491)
chr4 (113-239)||(21688186-21688313)
chr4 (130-240)||(36994478-36994589)
chr4 (130-240)||(5871774-5871885)
chr4 (130-240)||(26175739-26175850)
chr4 (134-240)||(47038513-47038619)
chr4 (130-240)||(54200009-54200120)
chr4 (130-240)||(48893741-48893856)
chr4 (130-240)||(5429633-5429744)
chr4 (130-240)||(52095465-52095576)
chr4 (131-240)||(24969067-24969177)
chr4 (34-132)||(26364124-26364222)
chr4 (141-240)||(34570517-34570617)
chr4 (130-240)||(48142996-48143108)
chr4 (130-240)||(9927561-9927671)
chr4 (130-240)||(36463492-36463603)
chr4 (129-240)||(41639217-41639328)
chr4 (131-237)||(52467460-52467567)
chr4 (130-240)||(56178740-56178850)
chr4 (47-240)||(26699546-26699741)
chr4 (130-240)||(31474104-31474216)
chr4 (162-240)||(26364223-26364301)
chr4 (34-175)||(33989721-33989862)
chr4 (164-240)||(46147494-46147570)
chr4 (130-240)||(12739653-12739764)
chr4 (130-240)||(12747859-12747970)
chr4 (130-240)||(37740580-37740690)
chr4 (130-240)||(52082760-52082871)
chr4 (131-239)||(37229826-37229935)
chr4 (140-240)||(3913412-3913513)
chr4 (132-240)||(12745539-12745648)
chr4 (130-225)||(13009549-13009645)
chr4 (130-240)||(29254448-29254559)
chr4 (130-240)||(6542282-6542395)
chr4 (49-240)||(22882854-22883047)
chr4 (49-240)||(22934518-22934711)
chr4 (34-133)||(41961270-41961368)
chr4 (130-225)||(51337018-51337116)
chr4 (131-239)||(5207946-5208055)
chr4 (49-239)||(33089762-33089942)
chr4 (130-240)||(4587912-4588024)
chr4 (130-240)||(29999910-30000019)
chr4 (148-227)||(5370200-5370283)
chr4 (37-121)||(3785952-3786034)
chr4 (130-240)||(45687285-45687397)
chr4 (73-240)||(35369544-35369711)
chr4 (148-240)||(53345189-53345282)
chr4 (187-238)||(5349922-5349973)
chr4 (148-240)||(48142481-48142574)
chr4 (189-240)||(12744028-12744079)
chr4 (189-240)||(12745417-12745468)
chr4 (34-69)||(40630843-40630878)
chr4 (175-240)||(13992395-13992461)
chr4 (195-240)||(12744150-12744195)
chr4 (190-240)||(35370451-35370501)
[»] scaffold0466 (1 HSPs)
scaffold0466 (34-240)||(7187-7392)
[»] chr6 (31 HSPs)
chr6 (34-240)||(17762848-17763055)
chr6 (34-240)||(21593525-21593729)
chr6 (37-240)||(26830226-26830430)
chr6 (34-240)||(2973042-2973248)
chr6 (34-240)||(5043486-5043692)
chr6 (34-240)||(3808812-3809017)
chr6 (34-240)||(603191-603389)
chr6 (38-240)||(22424930-22425130)
chr6 (130-240)||(9183134-9183245)
chr6 (130-240)||(28137511-28137622)
chr6 (157-240)||(21588913-21588996)
chr6 (147-240)||(17757994-17758088)
chr6 (130-240)||(3039006-3039117)
chr6 (71-235)||(25073463-25073628)
chr6 (130-240)||(16452432-16452543)
chr6 (130-240)||(2171634-2171744)
chr6 (130-240)||(5406303-5406412)
chr6 (130-240)||(5410628-5410737)
chr6 (130-240)||(26954389-26954499)
chr6 (130-240)||(33211288-33211399)
chr6 (148-240)||(30834639-30834733)
chr6 (117-240)||(4045364-4045488)
chr6 (130-240)||(31404778-31404887)
chr6 (148-240)||(5413497-5413589)
chr6 (179-240)||(16569037-16569099)
chr6 (160-240)||(33160455-33160536)
chr6 (34-122)||(5741012-5741099)
chr6 (34-86)||(17757943-17757995)
chr6 (175-240)||(6097544-6097608)
chr6 (179-240)||(16567200-16567262)
chr6 (175-240)||(3072864-3072928)
[»] chr3 (64 HSPs)
chr3 (36-240)||(49199573-49199777)
chr3 (35-239)||(54593565-54593768)
chr3 (34-240)||(30235984-30236190)
chr3 (34-240)||(34491072-34491277)
chr3 (34-240)||(46860330-46860539)
chr3 (34-240)||(6095702-6095908)
chr3 (34-237)||(47304110-47304313)
chr3 (34-240)||(4569810-4570017)
chr3 (34-240)||(36018710-36018917)
chr3 (35-240)||(41819626-41819830)
chr3 (38-240)||(43401905-43402095)
chr3 (34-240)||(43403848-43404042)
chr3 (34-240)||(5433979-5434186)
chr3 (35-240)||(55302084-55302273)
chr3 (97-240)||(31340304-31340447)
chr3 (34-182)||(40913198-40913350)
chr3 (130-239)||(40735337-40735447)
chr3 (130-240)||(5236559-5236670)
chr3 (130-240)||(40734452-40734563)
chr3 (131-240)||(44700581-44700691)
chr3 (130-240)||(44331499-44331610)
chr3 (130-240)||(31314399-31314510)
chr3 (130-240)||(51398768-51398879)
chr3 (130-240)||(53921606-53921717)
chr3 (118-240)||(9666569-9666693)
chr3 (124-240)||(46173315-46173422)
chr3 (130-240)||(22835105-22835216)
chr3 (131-240)||(29196489-29196600)
chr3 (148-240)||(7762237-7762330)
chr3 (34-240)||(26323177-26323384)
chr3 (130-240)||(19683992-19684103)
chr3 (130-240)||(29682313-29682424)
chr3 (130-240)||(29813017-29813128)
chr3 (130-240)||(32891057-32891169)
chr3 (36-240)||(35138809-35139013)
chr3 (134-240)||(760805-760912)
chr3 (130-240)||(39153464-39153575)
chr3 (130-240)||(5258247-5258358)
chr3 (130-240)||(9581237-9581347)
chr3 (130-240)||(16498984-16499094)
chr3 (130-240)||(29810822-29810933)
chr3 (130-240)||(45095119-45095228)
chr3 (142-227)||(26386597-26386683)
chr3 (130-240)||(7764422-7764529)
chr3 (148-240)||(37408430-37408523)
chr3 (130-240)||(5260426-5260537)
chr3 (130-240)||(23392012-23392123)
chr3 (130-240)||(23410432-23410543)
chr3 (33-127)||(1683346-1683438)
chr3 (34-133)||(20937516-20937613)
chr3 (130-240)||(9636229-9636340)
chr3 (130-240)||(23200241-23200350)
chr3 (178-240)||(32744539-32744600)
chr3 (49-240)||(39127421-39127612)
chr3 (143-239)||(5373198-5373297)
chr3 (130-240)||(23198042-23198151)
chr3 (34-129)||(34795728-34795821)
chr3 (180-239)||(54739057-54739116)
chr3 (148-225)||(2075174-2075253)
chr3 (71-127)||(36796692-36796747)
chr3 (197-240)||(25491071-25491114)
chr3 (195-240)||(28253370-28253416)
chr3 (175-240)||(801091-801155)
chr3 (117-237)||(8166563-8166685)
[»] scaffold0014 (1 HSPs)
scaffold0014 (34-240)||(80386-80592)
[»] scaffold0176 (1 HSPs)
scaffold0176 (35-240)||(18106-18309)
[»] scaffold0286 (1 HSPs)
scaffold0286 (34-240)||(11417-11622)
[»] scaffold0006 (1 HSPs)
scaffold0006 (130-240)||(149200-149311)
[»] scaffold0016 (1 HSPs)
scaffold0016 (130-240)||(114557-114667)
[»] scaffold0066 (1 HSPs)
scaffold0066 (130-240)||(20518-20629)
[»] scaffold0002 (2 HSPs)
scaffold0002 (148-240)||(434504-434598)
scaffold0002 (196-240)||(490424-490468)
[»] scaffold1519 (1 HSPs)
scaffold1519 (130-240)||(871-981)
[»] scaffold0491 (2 HSPs)
scaffold0491 (130-240)||(11265-11375)
scaffold0491 (160-221)||(8858-8919)
[»] scaffold0236 (1 HSPs)
scaffold0236 (160-224)||(10475-10540)


Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 47255648 - 47255443
Alignment:
Q  35 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgt 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  47255648 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaagactaagggttggttctcttttgggggttagattctagagttgggaaataattgt 47255549  T
Q  135 aaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagct 234  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47255548 aaatgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattggaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagct 47255449  T
Q  235 aatttc 240  Q
    ||||||    
T  47255448 aatttc 47255443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 11348557 - 11348763
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  11348557 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 11348656  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  11348657 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaattggtagaaattagggttgttctttgtgagcttgttgaagc 11348756  T
Q  234 taatttc 240  Q
    |||||||    
T  11348757 taatttc 11348763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 29136106 - 29136312
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||| |||||    
T  29136106 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttagttctcttttgggggttagattctagagttgtgaaacaattg 29136205  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  29136206 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 29136305  T
Q  234 taatttc 240  Q
    |||||||    
T  29136306 taatttc 29136312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 37033382 - 37033176
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| |||| |||||    
T  37033382 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatgggttggttctctttttggggttagattctagagttgggaaacaattg 37033283  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  37033282 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 37033183  T
Q  234 taatttc 240  Q
    |||||||    
T  37033182 taatttc 37033176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 36 - 240
Target Start/End: Original strand, 193472 - 193676
Alignment:
Q  36 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgta 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  193472 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattgta 193571  T
Q  136 aacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagcta 235  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  193572 aacaccttgggagggtgaaaatcatgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttattagcttgttgaagcta 193671  T
Q  236 atttc 240  Q
    |||||    
T  193672 atttc 193676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 37168156 - 37168362
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||    
T  37168156 ggtgagtcttgtgaaactaaaagagaagatccttagtgaaatcaaaggctaaaggttgattctcttttgggggttagattctagagttgggaaacaattg 37168255  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||    
T  37168256 taaacaccttgagagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgtttaagc 37168355  T
Q  234 taatttc 240  Q
    |||||||    
T  37168356 taatttc 37168362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 37879220 - 37879014
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| |||||    
T  37879220 ggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaaggctaaggattggttctcttttgggggttagattctagagttgggaaacaattg 37879121  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||    
T  37879120 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaataggtagaaattagggttgttctttgtgagcttgttgaagc 37879021  T
Q  234 taatttc 240  Q
    |||||||    
T  37879020 taatttc 37879014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 13547398 - 13547192
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||    
T  13547398 ggtgaatcttgtgaaaccaaaagagaagatacttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagatttgggaaacaattg 13547299  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  13547298 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 13547199  T
Q  234 taatttc 240  Q
    || ||||    
T  13547198 tattttc 13547192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 47115030 - 47115236
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  47115030 ggtgagtcttgtgaaaccaaaagagaagatccttaatgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 47115129  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||    
T  47115130 taaacatcttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaattggtagaaattagggttgttctttgtgagcttgtttaagc 47115229  T
Q  234 taatttc 240  Q
    |||||||    
T  47115230 taatttc 47115236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 34603435 - 34603641
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| |||||    
T  34603435 ggtgagtcttgtgaaaccaaaagagaagatccttag-gaaatcaaaggctaagggttggttctcttttggaggttagattctagagttgggaaacaattg 34603533  T
Q  134 taaacgccttgggagagtgaaaat-catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34603534 taaacaccttgggaaagtgaaaattcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtttaag 34603633  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  34603634 ctaatttc 34603641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 13549309 - 13549103
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||    
T  13549309 ggtgaatcttgtgaaaccaaaagagaagatacttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagatttgggaaacaattg 13549210  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || |    
T  13549209 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttaaacc 13549110  T
Q  234 taatttc 240  Q
    |||||||    
T  13549109 taatttc 13549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 42298284 - 42298078
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||    
T  42298284 ggtgagtcttgtgaaaccaaaagagaagatcctaagtgaaatcaaaggctaagagttggttctcttttgggggttagattctagagttgtgaaacaattg 42298185  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||||||||    
T  42298184 taaacaccttgggagagtaaaaatcatgagtgtcttgttcattggtgagattgggaaaattggtagaaattagggttgttttttgtgagcttgttgaagc 42298085  T
Q  234 taatttc 240  Q
    |||||||    
T  42298084 taatttc 42298078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 36 - 240
Target Start/End: Original strand, 19752546 - 19752751
Alignment:
Q  36 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgta 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||| |||    
T  19752546 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatgattggttctcttttgggggttagattctagagttgggaaataatcgta 19752645  T
Q  136 aacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgttgaagct 234  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  19752646 aacaccttgagagagtgaaaatcatgagtgtcttgttcattggtgagattgagtaaaatgggtagaaattagggttgttctttgcgagcttgttgaagct 19752745  T
Q  235 aatttc 240  Q
    ||||||    
T  19752746 aatttc 19752751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 31926015 - 31925810
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||  | |||    
T  31926015 ggtgagacttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatggttggttctcttttgggggttagattctagagttg-gaagcagttg 31925917  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  31925916 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagagtggaaaaatgggtagaaattagggatgttcattgtgagcttgttgaagc 31925817  T
Q  234 taatttc 240  Q
    |||||||    
T  31925816 taatttc 31925810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 19754350 - 19754560
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatcctta---gtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataa 130  Q
    ||||||||||||||||||||||||||| |||||||   ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||| |     
T  19754350 ggtgagtcttgtgaaaccaaaagagaaaatccttataagtgaaatcaaaggataatggttggttctcttttgggggttagattctagagttgggaaacat 19754449  T
Q  131 ttgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    | |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19754450 tcgtaaacaccttgagagagtgaaaatcatgagtgtcttgttcattggtgagattgagaaaaatgggtagaaattagggttgttctttgtgagcttgttg 19754549  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  19754550 aagctaatttc 19754560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 7482539 - 7482334
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||| |||  |||||    
T  7482539 ggtgagtcttgtgaaacaaaaagagaagatccttag-gaaatcaaag-ctaagggttggttctcttttgggggttagattctagagttgggaagcaattg 7482442  T
Q  134 taaacgccttgggagagtgaaaat-catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| |||||||| ||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||| |||    
T  7482441 taaacaccttgggaaagtgaaaattcatgagtgtattgttcattggtgagattgggtaaatgggtagaaattagggttgttctttgtgagcttgtttaag 7482342  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  7482341 ctaatttc 7482334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 28242247 - 28242385
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||  ||| |||||    
T  28242247 ggtgagtcttgtgaaaccaaaagagaatatccttagtgaaatcaaaggctatgggttggttctcttttaggggttagattctagagttggaaaacaattg 28242346  T
Q  134 taaacgccttgggagagtgaaaa-tcatgagtgtcttgt 171  Q
    ||||| ||||||||||||||||| || ||||||||||||    
T  28242347 taaacaccttgggagagtgaaaattcttgagtgtcttgt 28242385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 10925177 - 10925288
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  10925177 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgaaaaaatggatagaaattatggttgttctttgtgagcttgtt 10925276  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  10925277 gaagctaatttc 10925288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 31659192 - 31659303
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  31659192 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaatgggtagaaattagggctgttctttgtgagcttgtt 31659291  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  31659292 gaagctaatttc 31659303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 49918309 - 49918415
Alignment:
Q  135 aaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  49918309 aaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttgtgaacttgttgaagc 49918408  T
Q  234 taatttc 240  Q
    |||||||    
T  49918409 taatttc 49918415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 4552851 - 4552740
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  4552851 attgtaaacaccttgggtgagggaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattaggtttgtcctttgtgagcttgtt 4552752  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  4552751 gaagctaatttc 4552740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 37503768 - 37503657
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||    
T  37503768 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtaaaaattagggttgttctttgtgaacttgtt 37503669  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  37503668 gaagctaatttc 37503657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 50169424 - 50169313
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  50169424 attgtaaataccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaatgggtagaaattagggttgttctttgtgagcttgtc 50169325  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  50169324 aaagctaatttc 50169313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 3156837 - 3156930
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3156837 gagtgaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttc 3156930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 197122 - 197011
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  197122 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgagaaaattggtagaaattagggttgttctttgtgagcttgtt 197023  T
Q  229 gaagctaatttc 240  Q
     ||| |||||||    
T  197022 taagttaatttc 197011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 28265768 - 28265657
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||  ||||| |||||||||||||||||||| |||||||||||||    
T  28265768 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggcgagattgggaaaataggtagaaattagggttgttcattgtgagcttgtt 28265669  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  28265668 gaagctaatttc 28265657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 44455114 - 44455225
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  44455114 attgtaaacaccttgggtgagtgaaaaccattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 44455213  T
Q  229 gaagctaatttc 240  Q
    ||| ||||||||    
T  44455214 gaaactaatttc 44455225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 34602648 - 34602561
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttg 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  34602648 ggtgagtcttgtgaaaccaaaagagaagatccttag-gaaatcaaaggctaagggttggttctcttttggaggttagattctagagttg 34602561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 834381 - 834270
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| | ||||||||||| |||||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  834381 attgtaaacaccttgggtgcgtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatggatagaaattagggttgttctttgtgagcttgtt 834282  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  834281 taagctaatttc 834270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 3847335 - 3847228
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||| |||||    
T  3847335 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgggtagaaattagggttgttctttgtgagtttgtt 3847236  T
Q  229 gaagctaa 236  Q
     |||||||    
T  3847235 taagctaa 3847228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 8551001 - 8550890
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| | ||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  8551001 attgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtt 8550902  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  8550901 taagctaatttc 8550890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 13138188 - 13138079
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||    
T  13138188 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattga-aaaatggatagaaatta-ggtcgttctttgtgagcttgtt 13138091  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  13138090 gaagctaatttc 13138079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 15820261 - 15820372
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||| ||||||| |||| ||| ||||||| |||||||| ||||||||||||||||||||    
T  15820261 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttctttggtgatattggaaagatgggtaaaaattaggtttgttctttgtgagcttgtt 15820360  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  15820361 gaagctaatttc 15820372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 28220440 - 28220329
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    |||| |||| ||||||| ||||||||||||| ||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||    
T  28220440 attgaaaacaccttgggtgagtgaaaatcattgagtgtcttattcattggtgagattcggaaaatgggtagaaattagggttgttctttgtgaacttgtt 28220341  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  28220340 gaagctaatttc 28220329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 41360880 - 41360979
Alignment:
Q  141 cttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  41360880 cttgggtgagtgaaaatattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttc 41360979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 130 - 221
Target Start/End: Original strand, 1833476 - 1833568
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtga 221  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  1833476 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtga 1833568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 23555479 - 23555368
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| || ||||||| || ||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  23555479 attgtaaacaccttgggtgaatgaaaattattgagtgtcttattctttggtgagattggaaaaatgggtagaaattagggttgttctttgtgaacttgtt 23555380  T
Q  229 gaagctaatttc 240  Q
    ||| ||||||||    
T  23555379 gaaactaatttc 23555368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 46064872 - 46064983
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||| || |||||||| |||||||||||||||| |||    
T  46064872 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatggataaaaattaggtttgttctttgtgagctcgtt 46064971  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  46064972 gaagctaatttc 46064983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 50167389 - 50167278
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||  |||||||||||||||||| |||||||||||||     
T  50167389 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaattagtagaaattagggttgttatttgtgagcttgtc 50167290  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  50167289 aaagctaatttc 50167278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 28223625 - 28223524
Alignment:
Q  140 ccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatt 238  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||| ||| ||||||||||||||||    
T  28223625 ccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattatggttgatctttctgaacttgttgaagctaatt 28223526  T
Q  239 tc 240  Q
    ||    
T  28223525 tc 28223524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 928190 - 928079
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgtt 228  Q
    |||||||| ||||||| |||||||||||| |||||||||||||| ||||||| |||| |||||  | |||||||||||||| ||||||||||||||||||    
T  928190 ttgtaaacaccttgggtgagtgaaaatcaatgagtgtcttgttctttggtgatattggaaaaaatgatagaaattagggtttgttctttgtgagcttgtt 928091  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  928090 gaagctaatttc 928079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 3189285 - 3189395
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||||||||||||||   |||| ||||| |||||||||||||||||||||| ||||||    
T  3189285 attgtaaacaccttggt-gagtgaaaatcactgagtgtcttgttcattggtgagatttggaaaaagggtataaattagggttgttctttgtgaacttgtt 3189383  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  3189384 gaagctaatttc 3189395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 3198102 - 3198212
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||||||||||||||   |||| ||||| |||||||||||||||||||||| ||||||    
T  3198102 attgtaaacaccttggt-gagtgaaaatcactgagtgtcttgttcattggtgagatttggaaaaagggtataaattagggttgttctttgtgaacttgtt 3198200  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  3198201 gaagctaatttc 3198212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 3206941 - 3207051
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||||||||||||||   |||| ||||| |||||||||||||||||||||| ||||||    
T  3206941 attgtaaacaccttggt-gagtgaaaatcactgagtgtcttgttcattggtgagatttggaaaaagggtataaattagggttgttctttgtgaacttgtt 3207039  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  3207040 gaagctaatttc 3207051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 13659550 - 13659439
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||||||  |||||||||||| |||||||||||||||| |||||||||  |||| || ||||||||||||||||| ||||| ||||||||    
T  13659550 attgtaaacaccttggggtagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaacggatagaaattagggttgttttttgtaagcttgtt 13659451  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  13659450 gaagctaatttc 13659439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 40122412 - 40122301
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| |||| |||||||| || ||||||||||||| ||||||||| |||||||||| ||||||||  ||||||||||||||||||||    
T  40122412 attgtaaacaccttgggtgagtaaaaatcattgaatgtcttgttcatttgtgagattggaaaaatgggtcgaaattagatttgttctttgtgagcttgtt 40122313  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  40122312 taagctaatttc 40122301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 20762626 - 20762737
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| |||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  20762626 attgtaaacaccttggt-gagtgaaaatcattgagtatcttgttcattggtgagattgagaaaaaagggtagaaattagggttgttctttgtgaacttgt 20762724  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  20762725 caaagctaatttc 20762737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 37560083 - 37559971
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| | || || ||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||| ||||||    
T  37560083 attgtaaacacattaggtgagtgaaaatcattgagtgtcttgttcattggtgagattaggaaaatgggtagaaattagagttgttctttgtgaacttgtt 37559984  T
Q  229 g-aagctaatttc 240  Q
    | |||||||||||    
T  37559983 gaaagctaatttc 37559971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 41135679 - 41135771
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaa 127  Q
    ||||||||||  ||||||||||||||||||| || | ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  41135679 ggtgagtcttaggaaaccaaaagagaagatcatttg-gaaattaaaggctaaggattggttctcttttgggggttagattctagagttgagaaa 41135771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 45644569 - 45644457
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcatga-gtgtcttgttcattggtgagattgaaaaaatgggtagaaatt-agggttgttctttgtgagcttgt 227  Q
    |||||||||  |||||| ||||||||||||| | ||||||||||||||||||||||||| ||||||| |||||||| ||  |||||||||||||||||||    
T  45644569 attgtaaacatcttgggtgagtgaaaatcattaagtgtcttgttcattggtgagattgagaaaatggatagaaattaagttttgttctttgtgagcttgt 45644470  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  45644469 caaagctaatttc 45644457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 22079181 - 22079381
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||  ||||||||| | ||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  22079181 ggtgagtcttggcaaaccaaaatataagatgctta-tgaaatcaaaggctaaggattg-ttctcttttgggggttagattctagagttgagaaacaattg 22079278  T
Q  134 taaacgccttg-ggagagtgaaaatcatgagtgtcttgttcattggt-gagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaa 231  Q
      ||   |||  || ||||||||  |||     |||||||||| ||  ||||||| |||||||| ||||||||| | |||||||||||||||||||| ||    
T  22079279 ggaaaaacttcaggtgagtgaaac-catt----tcttgttcatgggaagagattggaaaaatgg-tagaaattatgtttgttctttgtgagcttgttaaa 22079372  T
Q  232 gctaatttc 240  Q
    |||||||||    
T  22079373 gctaatttc 22079381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 16455586 - 16455686
Alignment:
Q  140 ccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatt 238  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||  |||||||||  || ||| | |||||||||||||||||||||    
T  16455586 ccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggtaaaatggtgagaaattagattttttc-tagtgagcttgttgaagctaatt 16455684  T
Q  239 tc 240  Q
    ||    
T  16455685 tc 16455686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 30476662 - 30476550
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttca---ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagctt 225  Q
    ||||||||| ||||||| | ||||||||||| |||| |||||||||   ||||||||||||  ||||| ||||||||||||||||||||||| ||| |||    
T  30476662 attgtaaacaccttgggtgggtgaaaatcattgagt-tcttgttcaatattggtgagattgggaaaataggtagaaattagggttgttctttatgaactt 30476564  T
Q  226 gttgaagctaattt 239  Q
    ||||||| ||||||    
T  30476563 gttgaagataattt 30476550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 37282887 - 37282796
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaattt 239  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||||   |||| ||||||||| |||||| ||||||||||||||||||||||||    
T  37282887 gagtgaaaaccattgagtgtcttgttcattggagagattgaaaaa--tggtataaattagggtttgttccttgtgagcttgttgaagctaattt 37282796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 8871259 - 8871151
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgttg 229  Q
    |||||||| ||||||  ||| ||||||||| |||||||||||| || ||||||||   ||||||| |||||||||||||| |||||||||||| | ||||    
T  8871259 ttgtaaacaccttggatgagcgaaaatcat-agtgtcttgttcttttgtgagatttggaaaatgg-tagaaattagggtttgttctttgtgagttcgttg 8871162  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  8871161 aagctaatttc 8871151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 175
Target Start/End: Original strand, 6808319 - 6808446
Alignment:
Q  47 aaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaaacgccttggg 146  Q
    |||||||||||||||||| ||| || |||||||| |  | ||||| |||||||| | || ||||||||||||||||||||| | | | |||| | |||||    
T  6808319 aaaccaaaagagaagatcatta-tgtaatcaaagacggaaggttggttctctttcgagg-ttagattctagagttgagaaacattgggaaacactttggg 6808416  T
Q  147 agagtgaaaatca-tgagtgtcttgttcat 175  Q
    ||||||||||| | ||||||||||||||||    
T  6808417 agagtgaaaattattgagtgtcttgttcat 6808446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 13316520 - 13316455
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||| |||||  |||||||||||    
T  13316520 ttggtgagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttc 13316455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 36683694 - 36683755
Alignment:
Q  179 tgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||  ||||| ||||||||||||| || ||||||||||| |||||||||||||||||    
T  36683694 tgagattgggaaaataggtagaaattaggtttattctttgtgagtttgttgaagctaatttc 36683755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 44650376 - 44650267
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaatta-gggttgttctttgtgagcttgt 227  Q
    |||||||| | ||||| |||||||||| || |||||||||||||||||| |||||||| ||||||  ||| |||||| || |||||||||||||| ||||    
T  44650376 ttgtaaacactttgggtgagtgaaaattattgagtgtcttgttcattggagagattgagaaaaat--gtaaaaattatggtttgttctttgtgagtttgt 44650279  T
Q  228 tgaagctaattt 239  Q
    | | ||||||||    
T  44650278 taacgctaattt 44650267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 3460709 - 3460760
Alignment:
Q  189 aaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaattt 239  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  3460709 aaaaagggtagaaattagagtttgttctttgtgagcttgttgaagctaattt 3460760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 3331428 - 3331503
Alignment:
Q  49 accaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaa 127  Q
    |||||||||| |||||||||| ||||||||||||||||||||  || |||||| |||||| ||||||||||||| ||||    
T  3331428 accaaaagaggagatccttag-gaaatcaaaggctaagggtttgtt-tctttt-ggggttggattctagagttgggaaa 3331503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 12318676 - 12318626
Alignment:
Q  190 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||||||||| |||||| | | |||||||||||||||||||||    
T  12318676 aaatgggtagaaattaggtttgttcatggagagcttgttgaagctaatttc 12318626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 12318790 - 12318720
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggg 105  Q
    ||||||||||| || ||||||| |||| ||| || | ||||||||||||||||||||| |||||||| ||||    
T  12318790 ggtgagtcttgggagaccaaaatagaaaatcttttg-gaaatcaaaggctaagggttggttctctttggggg 12318720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 44646980 - 44646888
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaatta-gggttgttctttgtgagcttgttgaagctaattt 239  Q
    |||||||||| || |||||||||||||||||| |||||||| ||||||  ||| |||||| || |||||||||||||| ||||| | ||||||||    
T  44646980 gagtgaaaattattgagtgtcttgttcattggagagattgagaaaaat--gtaaaaattatggtttgttctttgtgagtttgttaacgctaattt 44646888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 9987202 - 9987266
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||  |||| ||||||||||||||||||||| |||||| |||||  || ||||||||    
T  9987202 ttggtgagattgggaaaa-gggtagaaattagggttgttcattgtgaacttgtctaatctaatttc 9987266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 20622406 - 20622342
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||  |||| ||||||||||||||||||||| |||||| |||||  || ||||||||    
T  20622406 ttggtgagattgggaaaa-gggtagaaattagggttgttcattgtgaacttgtcaaatctaatttc 20622342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 10157501 - 10157571
Alignment:
Q  60 agatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt 132  Q
    |||||||||| |||||||||| |||||||||| |||  ||| ||||||||||||||| |||||| ||| ||||    
T  10157501 agatccttag-gaaatcaaagactaagggttggttca-tttagggggttagattctaaagttgaaaaacaatt 10157571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 6e-95; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 34 - 237
Target Start/End: Complemental strand, 1632041 - 1631838
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  1632041 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 1631942  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  1631941 taaacaccttgagagagtgaaaatcatgagtgtcttgttcattggtgagattggaaaaatgggtagaaattaggattgttctttgtgagcttgttgaagc 1631842  T
Q  234 taat 237  Q
    ||||    
T  1631841 taat 1631838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 35447193 - 35446987
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  35447193 ggtgagtcttgtaaaaccaaaagagaagatacttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 35447094  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||| |    
T  35447093 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattggtaaaattggtagaaattagggttgttctttgtgatcttgttgaatc 35446994  T
Q  234 taatttc 240  Q
    |||||||    
T  35446993 taatttc 35446987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 45726788 - 45726994
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||  |||| |||||    
T  45726788 ggtgagtcatgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagggttaggaaacaattg 45726887  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  45726888 taaacaccttgggagagtgaaaatcatgagtgtcttattcattggtgagattgggaaaatgggtagaaattagagttgttctttgtgagcttgttgaagc 45726987  T
Q  234 taatttc 240  Q
    |||||||    
T  45726988 taatttc 45726994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 42288419 - 42288214
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||| |||| |||||    
T  42288419 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttcgggtttagattctagagttgggaaacaattg 42288320  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||    
T  42288319 taaacaccttgggagagtgaaaatcacgagtgtcttgtgcattggtgagattgggaaaatgggtagaaattaaggttgttctttgtgagcttgttgaagc 42288220  T
Q  234 taattt 239  Q
    ||||||    
T  42288219 taattt 42288214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 17450450 - 17450655
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||| | |||    
T  17450450 ggtgagtcttgtgaaaccaaaagagaagatcattag-gaaatcaaaggctaagggttgattctctattgggggttggattctagagttggcaaacatttg 17450548  T
Q  134 taaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
     |||| ||||||| ||||||||||||| |||||||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||||||||||||||    
T  17450549 caaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagatttgaaaaatgggtagagattaggcttgttctttgtgagcttgttgaag 17450648  T
Q  233 ctaattt 239  Q
    |||||||    
T  17450649 ctaattt 17450655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 38 - 240
Target Start/End: Original strand, 24397921 - 24398122
Alignment:
Q  38 agtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaaa 137  Q
    ||||||||||||||||||||||| ||||||||  || |||||| |||||||||| ||||   |||||||||||||| |||||||| |||| |||||||||    
T  24397921 agtcttgtgaaaccaaaagagaatatccttaga-aagtcaaag-ctaagggttggttct---ttgggggttagattatagagttgggaaacaattgtaaa 24398015  T
Q  138 cgccttggga-gagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaa-aatgggtagaaattagggtt-gttctttgtgagcttgttgaagc 233  Q
    | |||| ||| |||||||||||| |||||||||||||||||||||||||||  || || |||||||| ||| |||| |||||||||||||||||||||||    
T  24398016 cacctttggaagagtgaaaatcaatgagtgtcttgttcattggtgagattgtgaagaaagggtagaagttaaggtttgttctttgtgagcttgttgaagc 24398115  T
Q  234 taatttc 240  Q
    |||||||    
T  24398116 taatttc 24398122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 36318223 - 36318113
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36318223 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaatgggtagaaattagggttgttctttgtgagcttgtt 36318124  T
Q  229 gaagctaattt 239  Q
    ||| |||||||    
T  36318123 gaaactaattt 36318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 34139985 - 34139874
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34139985 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgagaaaatgggtagaaattagggttgttctttgtgagcttgtt 34139886  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  34139885 taagctaatttc 34139874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 17057583 - 17057473
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  17057583 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaatgggtagaaattagggttgttctttgcaagcttgtt 17057484  T
Q  229 gaagctaattt 239  Q
    |||||||||||    
T  17057483 gaagctaattt 17057473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 17085566 - 17085456
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  17085566 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaatgggtagaaattagggttgttctttgcaagcttgtt 17085467  T
Q  229 gaagctaattt 239  Q
    |||||||||||    
T  17085466 gaagctaattt 17085456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 240
Target Start/End: Original strand, 33648032 - 33648236
Alignment:
Q  37 gagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgt-a 135  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||   ||||||| ||| ||||||||||||||||||||||||||| || ||||  || |    
T  33648032 gagtcttataaaaccaaaagagaagatccttagggaaatcaaag--caagggttaattatcttttgggggttagattctagagttgggacataaccgtaa 33648129  T
Q  136 aacgccttgggagagtgaaaatca-tgagtgtcttgttcat-tggtgagattgaaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaag 232  Q
    |||  ||||||||||||||||| | |||||||||||| |||  |  |||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||    
T  33648130 aacatcttgggagagtgaaaataattgagtgtcttgtacatgagaggagattgagaaaat-ggtaaaaattagggtttgttctttgtgagcttgttgaag 33648228  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  33648229 ctaatttc 33648236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 36773516 - 36773627
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||| | |||||||||||||||||||||||||||||    
T  36773516 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggaataaattagggttgttctttgtgagcttgtt 36773615  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  36773616 gaagctaatttc 36773627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 723958 - 723847
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  723958 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggaaaactgggtagaaattaggtttgttctttgtgagcttgtt 723859  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  723858 taagctaatttc 723847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 11690455 - 11690566
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  11690455 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtt 11690554  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  11690555 taagctaatttc 11690566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 14634040 - 14633929
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  14634040 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggtaaaatgggtagaaattaggattgttctttgtgagcttgtt 14633941  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  14633940 taagctaatttc 14633929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 29867823 - 29867934
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||     
T  29867823 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtc 29867922  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  29867923 aaagctaatttc 29867934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 33162664 - 33162553
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| || |||||||||| ||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||    
T  33162664 attgtaaacaccttgggtgattgaaaatcatcgagtgtcttgttcattggtgaaattaggaaaatgggtagaaattagggttgttctttgtgagcttgtt 33162565  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  33162564 gaagctaatttc 33162553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 42362306 - 42362417
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  42362306 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtt 42362405  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  42362406 taagctaatttc 42362417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 2334631 - 2334521
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||    
T  2334631 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaataagggttgttctttgtgaacttgtt 2334533  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  2334532 gaagctaatttc 2334521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 38312194 - 38312305
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    |||||| || ||||| | ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  38312194 attgtatacaccttgtgtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 38312293  T
Q  229 gaagctaatttc 240  Q
    ||| ||||||||    
T  38312294 gaaactaatttc 38312305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 11067259 - 11067370
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||| ||||| ||||||||||||||     
T  11067259 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttattcattggtgaaattggaaaaatgggtagaaattagtgttgtactttgtgagcttgtc 11067358  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  11067359 aaagctaatttc 11067370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 11151805 - 11151694
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||| |||||||||||||||| ||||  ||||||||||||||||||  ||||||||||||||||||||    
T  11151805 attgtaaacaccttgggtgagtgaaaatcattgagtctcttgttcattggtgaaattgggaaaatgggtagaaattagatttgttctttgtgagcttgtt 11151706  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  11151705 taagctaatttc 11151694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 24885615 - 24885726
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| || | ||||  |||||| |||||||||||| ||||||||||||||||||||    
T  24885615 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtaaaattgggaaaatgagtagaaattaggtttgttctttgtgagcttgtt 24885714  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  24885715 taagctaatttc 24885726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 39284839 - 39284929
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgt 219  Q
    ||||||||| ||||||| ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  39284839 attgtaaacaccttgggtgagtgaaaatcattgagtatcttgttcattggtgagattggaaaaatgggtagaaattagggttgctctttgt 39284929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 45099709 - 45099820
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||    
T  45099709 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgt 45099807  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  45099808 caaagctaatttc 45099820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 5723468 - 5723359
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||     
T  5723468 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgagaaaa-gggtagaaattaggcttgttctttgtgaacttgtc 5723371  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  5723370 aaagctaatttc 5723359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 6595206 - 6595109
Alignment:
Q  145 ggagagtgaaaatcat-gagtgtcttgttcattggtgagatt--gaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||| |||||| | |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  6595206 ggagagtgagaatcattgggtgtcttgttcattggtgagattaggaaaaaatgg-tagaaattagggttgttctttgtgaacttgttgaagctaatttc 6595109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 13121724 - 13121834
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgtt 228  Q
    |||||||| | ||||| ||||||||||||| ||||||||||||||||||||||| ||  ||||||| |||||||||||||| ||||||||||||||||||    
T  13121724 ttgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgagactgggaaaatgg-tagaaattagggtttgttctttgtgagcttgtt 13121822  T
Q  229 gaagctaatttc 240  Q
    |||| |||||||    
T  13121823 gaagataatttc 13121834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 36205860 - 36205767
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||| |||||  |||||||||||    
T  36205860 gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttc 36205767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 36988272 - 36988179
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||  || ||||||||    
T  36988272 gagtgaaaatcattgagtgtcttgttcattggtgggattggaaaaaagggtagaaattagggttgttctatgtgagcttgtcaaaactaatttc 36988179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 4503346 - 4503235
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg--aaaaaatgggtagaaattagggttgttctttgtgagcttg 226  Q
    ||||||||| ||||||  ||||||||||||| |||||||||||||||||| |||||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  4503346 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggagagattgggaaaaaatgg-tagaaattagggttgttctttgtgaacttg 4503249  T
Q  227 ttgaagctaatttc 240  Q
    |  |||||||||||    
T  4503248 tcaaagctaatttc 4503235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 14202621 - 14202508
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat---gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttg 226  Q
    ||||||||| ||||||| |||||||||| ||   | ||||||| ||||||  ||||||||  ||||||||||||||||| | ||||||||||||||||||    
T  14202621 attgtaaacaccttgggtgagtgaaaattattgagtgtgtctttttcatttctgagattgggaaaatgggtagaaattatgtttgttctttgtgagcttg 14202522  T
Q  227 ttgaagctaatttc 240  Q
    || |||||||||||    
T  14202521 tttaagctaatttc 14202508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 240
Target Start/End: Complemental strand, 7815498 - 7815376
Alignment:
Q  119 gttgagaaataattgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattaggg-ttgttctt 216  Q
    ||||||||| | |||||||| |||| || | ||||||||||| | ||||||||||||||||||||||||| ||||  ||| |||||||||| ||||||||    
T  7815498 gttgagaaacatttgtaaacaccttaggtgggtgaaaatcattgcgtgtcttgttcattggtgagattgagaaaa-aggttgaaattagggtttgttctt 7815400  T
Q  217 tgtgagcttgttgaagctaatttc 240  Q
    |   ||||||||||||||||||||    
T  7815399 tagaagcttgttgaagctaatttc 7815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 4484544 - 4484434
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaa-aaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||| ||||||| ||||||||||||| ||||||| ||||  | ||| |||||||||||||||||||||||||||| |||||    
T  4484544 attgtaaacaccttggt-gagtgtaaatcattgagtgtcttgttc-ttggtgaaattgggagaaaagggtagaaattagggttgttctttgtgaacttgt 4484447  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  4484446 caaagctaatttc 4484434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 11049505 - 11049618
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttct---ttgtgagctt 225  Q
    |||||||| |||||||  |||||||||||| ||||||||||||  |||||||||||   ||||||| || ||||||||||| |||||   ||||||||||    
T  11049505 ttgtaaacaccttgggtaagtgaaaatcattgagtgtcttgttttttggtgagattaggaaaatgg-tataaattagggtttgttctaatttgtgagctt 11049603  T
Q  226 gttgaagctaatttc 240  Q
    |||||||||||||||    
T  11049604 gttgaagctaatttc 11049618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 26353178 - 26353249
Alignment:
Q  169 tgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttc 240  Q
    ||||| |||||||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||||||||    
T  26353178 tgttctttggtgagattgaaaaaa-gtgtagaaattaaggtttgttctttgtgagtttgttgaagctaatttc 26353249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 12123794 - 12123688
Alignment:
Q  134 taaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| ||||||  ||||||||||||| |||||||||||||||| | ||||||| |||| || ||| ||||||| |||||||||| |||  |||||||||    
T  12123794 taaacaccttggatgagtgaaaatcatcgagtgtcttgttcatttgagagattggaaaa-tgagtataaattagagttgttctttatgattttgttgaag 12123696  T
Q  233 ctaatttc 240  Q
    || |||||    
T  12123695 cttatttc 12123688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 30833317 - 30833410
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaa-aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||| ||||||| ||||||||||||| ||||||||||||  | ||| |||||||||||||||||||||||||||| |||||  ||| |||||||    
T  30833317 gagtgtaaatcattgagtgtcttgttc-ttggtgagattgggagaaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttc 30833410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 30218342 - 30218148
Alignment:
Q  35 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgt 134  Q
    |||||||||| ||||||||||| |  ||||||||| ||||||||| |||||   ||| ||||||||||||||||||  ||||||||||          |     
T  30218342 gtgagtcttgcgaaaccaaaagggg-gatccttag-gaaatcaaaagctaaatattggttctcttttgggggttaggctctagagttg----------gg 30218255  T
Q  135 aaacgccttgggagagtgaaaatca-tgagtgtcttgttcattg-gtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    |||| |||||  |||||| |||||| |||||||||||||||| |   ||||||| | |||||||||||| ||||| |||||||| | |||||| ||||||    
T  30218254 aaacaccttgacagagtggaaatcattgagtgtcttgttcatggaaggagattg-agaaatgggtagaagttaggtttgttcttggagagcttattgaag 30218156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 17490336 - 17490251
Alignment:
Q  150 gtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||| || |||||||||||||| |||||||| ||||   ||||||||||    || |||||||||||||||||||||||||||||    
T  17490336 gtgaaaatcattgaatgtcttgttcattgttgagattggaaaat--ggtagaaatt----ttattctttgtgagcttgttgaagctaatttc 17490251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 32289565 - 32289628
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||| |||||  || ||||||||    
T  32289565 ttggtgagattggaaaa--gggtagaaattagggttgttctttgtgaacttgtcaaatctaatttc 32289628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 5700347 - 5700271
Alignment:
Q  119 gttgagaaataattgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatg 194  Q
    ||||||||| | |||||||| | ||||| || |||||| ||| |||||||||||||||||| |||||||| ||||||    
T  5700347 gttgagaaacatttgtaaacactttgggtgaatgaaaaacattgagtgtcttgttcattggagagattgagaaaatg 5700271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 41446159 - 41446203
Alignment:
Q  195 ggtagaaattagggttgttctttgtgagcttgttgaagctaattt 239  Q
    ||||||||||| | |||||||||| ||||||||||||||||||||    
T  41446159 ggtagaaattatgtttgttctttgagagcttgttgaagctaattt 41446203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 41454254 - 41454299
Alignment:
Q  195 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||  ||||| |||| |||||||||||||||||||||    
T  41454254 ggtagaaattagatttgttttttgagagcttgttgaagctaatttc 41454299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 42261633 - 42261589
Alignment:
Q  196 gtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||| | |||||||| | |||||||||||||||||||||    
T  42261633 gtagaaattaagtttgttcttggagagcttgttgaagctaatttc 42261589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 43731007 - 43731092
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttg 122  Q
    ||||| ||||| |||||||||| |||| |||| ||| |||||||||| |||| ||||| || |||||||||| ||| ||||||||||||    
T  43731007 ggtgaatcttgggaaaccaaaatagaatatccgtag-gaaatcaaagtctaaaggttggtt-tcttttgggg-ttaaattctagagttg 43731092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 11383845 - 11384050
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  11383845 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaataattg 11383944  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11383945 taaacaccttgggagagtgaaaatcatgagtgtcttgttcatt-atgagattggaaaaatgggtagaaattagggttgttctttgtgagtttgttgaagc 11384043  T
Q  234 taatttc 240  Q
    |||||||    
T  11384044 taatttc 11384050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 42435299 - 42435094
Alignment:
Q  35 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgt 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||  ||| ||||||    
T  42435299 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgagggttagattctagagttggtaaacaattgt 42435200  T
Q  135 aaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagct 234  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42435199 aaacactttgggagagtgaaaatcatgagtgtcttgttcattggtgagattggaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagct 42435100  T
Q  235 aatttc 240  Q
    ||||||    
T  42435099 aatttc 42435094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 36 - 240
Target Start/End: Original strand, 4283385 - 4283589
Alignment:
Q  36 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgta 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  4283385 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattgta 4283484  T
Q  136 aacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagcta 235  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  4283485 aacaccttaggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttttttgtgagcttgttgaagcta 4283584  T
Q  236 atttc 240  Q
    |||||    
T  4283585 atttc 4283589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 40221604 - 40221810
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||    
T  40221604 ggtgagtcttgtaaaaccaaaagagaagatccttagtgaaatcaaaggctaaaggttggttctcttttgggggttagattctagagttgggaaacaattg 40221703  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |    
T  40221704 taaacaccttgggagagtgaaaatcatgagtgtcttgttctttggtgagattggtaaaatgggtagaaattagggttgttctttgtgagcttgttgaaac 40221803  T
Q  234 taatttc 240  Q
    |||||||    
T  40221804 taatttc 40221810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 18655260 - 18655465
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||  |||| |||||    
T  18655260 ggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaaggctaagggttgatactcttttgggg-ttagattctagacttaggaaacaattg 18655358  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  18655359 taaacaccttgggagagtgaaaatcatgagtgttttgttcattggtgagattgagaaaatgggtagaaattaaggttgttctttgtgagcttgttgaagc 18655458  T
Q  234 taatttc 240  Q
    |||||||    
T  18655459 taatttc 18655465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 40328638 - 40328844
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||| |||||    
T  40328638 ggtgagtcttgtgaaaccaaaagagaagatctttagtgaaatcaaaggctatgagttggttctcttttgggggttagattctagagttgggaaacaattg 40328737  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    |||||  |||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||||| || |    
T  40328738 taaacatcttgggagagtgaaaatcatgaatgtcttgttcatttgtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaaac 40328837  T
Q  234 taatttc 240  Q
    |||||||    
T  40328838 taatttc 40328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 44353651 - 44353858
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  44353651 ggtgagtcttgtgaaaccaaaagaaaagattcttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 44353750  T
Q  134 taaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| | ||||| |||| ||||||| ||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  44353751 taaacacattgggtgagtaaaaatcattgagtatcttgttcatttgtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaag 44353850  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  44353851 ctaatttc 44353858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 27811232 - 27811343
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  27811232 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgtt 27811331  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  27811332 gaagctaatttc 27811343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 4731612 - 4731723
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  4731612 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgctctttgtgagcttgtt 4731711  T
Q  229 gaagctaatttc 240  Q
    ||| ||||||||    
T  4731712 gaacctaatttc 4731723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 15212740 - 15212851
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  15212740 attgtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 15212839  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  15212840 gaagctaatttc 15212851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 43036377 - 43036488
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  43036377 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 43036476  T
Q  229 gaagctaatttc 240  Q
    ||| ||||||||    
T  43036477 gaaactaatttc 43036488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 240
Target Start/End: Complemental strand, 10930424 - 10930302
Alignment:
Q  118 agttgagaaataattgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttcttt 217  Q
    ||||| |||| ||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||||||||||||| |||||    
T  10930424 agttgggaaacaattgtaaacattttgggagagtgaaaatcatgagtgtcttgttcatcggtgagattgggaaaatggatagaaattagggttgctcttt 10930325  T
Q  218 gtgagcttgttgaagctaatttc 240  Q
    ||||||| |||||||||||||||    
T  10930324 gtgagctcgttgaagctaatttc 10930302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 18141776 - 18141885
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  18141776 ttgtaaacaccttgggcgagtgaaaatcattgagtgtcttgttcattggtgagattgtgaaaatgggtagaaatta-ggttgttctttgtgagcttgttg 18141874  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  18141875 aagctaatttc 18141885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 30291561 - 30291672
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagg-gttgttctttgtgagcttgtt 228  Q
    |||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  30291561 ttgtaaacaccttgggtgattgaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattaggttttgttctttgtgagcttgtt 30291660  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  30291661 gaagctaatttc 30291672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 19491901 - 19491802
Alignment:
Q  141 cttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19491901 cttgggtgagtgaaaatattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttc 19491802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 33352104 - 33352215
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| || |||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||    
T  33352104 attgtaaacaccttgggtgattgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtaaaaattagggttgttctttgtgaacttgtt 33352203  T
Q  229 gaagctaatttc 240  Q
    ||| ||||||||    
T  33352204 gaacctaatttc 33352215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 30143296 - 30143405
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    ||||||||| | ||||| |||||||||||||  ||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  30143296 attgtaaacacattgggtgagtgaaaatcatt-gtgtcttgttcattggccagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttg 30143394  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  30143395 aagctaatttc 30143405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 1292667 - 1292566
Alignment:
Q  140 ccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatt 238  Q
    ||||||| |||||||||| || ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  1292667 ccttgggtgagtgaaaattattgagtgtcttgttctttggtgagattgagaaaatgggtagaaattaagtttgttctttgtgagcttgttgaagctaatt 1292568  T
Q  239 tc 240  Q
    ||    
T  1292567 tc 1292566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 117 - 240
Target Start/End: Complemental strand, 1345597 - 1345474
Alignment:
Q  117 gagttgagaaataattgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttct 215  Q
    |||||| |||||| |||||||| ||||||| ||||||||||||| || ||||||||||||| |||||||||  |||||| ||||||||||||||||||||    
T  1345597 gagttgggaaata-ttgtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcatttgtgagattgggaaaatgtgtagaaattagggttgttct 1345499  T
Q  216 ttgtgagcttgttgaagctaatttc 240  Q
    ||||||| || ||||||||||||||    
T  1345498 ttgtgagtttattgaagctaatttc 1345474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 40321034 - 40321145
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||| | || |||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  40321034 attgtaaacaccttgagtgactgaaaatcattgagtgtcttgttcataggtgagattgggaaaatgggtagaaattagggttgttcattgtgagcttgtt 40321133  T
Q  229 gaagctaatttc 240  Q
    |||| |||||||    
T  40321134 gaagttaatttc 40321145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 9765703 - 9765810
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    ||||||||| ||||||| |||||||| |   ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||       
T  9765703 attgtaaacaccttgggtgagtgaaatt---gagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttggca 9765799  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  9765800 aagctaatttc 9765810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 4743417 - 4743311
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| | |||||    
T  4743417 attgtaaacaccttgggtgagcgaaaatcattgagtgtcttgttcattggtgagattggaaaaatgggtag-aattaggtttgttctttgtgtgtttgtt 4743319  T
Q  229 gaagctaa 236  Q
    ||||||||    
T  4743318 gaagctaa 4743311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 5689225 - 5689336
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||| ||| || ||||||||||||||     
T  5689225 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattaatgagattggaaaaatgggtagaaattaaggtggtgctttgtgagcttgtc 5689324  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  5689325 aaagctaatttc 5689336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 42498149 - 42498259
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    |||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  |||||  ||||||||||||||||||||||||||| ||||||    
T  42498149 ttgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaaaggtagaaattagggttgttctttgtgaacttgtt 42498247  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  42498248 gaagctaatttc 42498259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 1746432 - 1746321
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatg-ggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||    
T  1746432 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgaaaaaaaaaggtagaaattagggttgttctttgtgaacttgt 1746334  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  1746333 caaagctaatttc 1746321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 12702852 - 12702737
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcatga-gtgtcttgttcattggtgagattg-----aaaaaatgggtagaaattagggttgttctttgtgagc 223  Q
    ||||||||| ||||||  ||||||||||||| | ||||||||||||||||||||||||     |||||| |||||||||||||||||||||||||||| |    
T  12702852 attgtaaacaccttggt-gagtgaaaatcattaagtgtcttgttcattggtgagattgggaaaaaaaaaagggtagaaattagggttgttctttgtgaac 12702754  T
Q  224 ttgttgaagctaatttc 240  Q
    |||||||||||||||||    
T  12702753 ttgttgaagctaatttc 12702737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 3303884 - 3303773
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||| | ||||||||||||| |||| ||||||| |||||||||||||  ||||||||||||||||| | ||||||||||||||||||||    
T  3303884 attgtaaacaccttgagtgagtgaaaatcattgagtatcttgtttattggtgagattgggaaaatgggtagaaattaagtttgttctttgtgagcttgtt 3303785  T
Q  229 gaagctaatttc 240  Q
     || ||||||||    
T  3303784 taacctaatttc 3303773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 6598926 - 6599037
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcatga-gtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||| | ||||||||||||| | |||||||||||||| |||||||||  ||||||||||||||||| | |||||||||| |||||||||    
T  6598926 attgtaaacaccttgagtgagtgaaaatcattaagtgtcttgttcatttgtgagattgggaaaatgggtagaaattaagtttgttctttgcgagcttgtt 6599025  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  6599026 taagctaatttc 6599037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 6674379 - 6674490
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcatga-gtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||| | ||||||||||||| | |||||||||||||| |||||||||  ||||||||||||||||| | |||||||||| |||||||||    
T  6674379 attgtaaacaccttgagtgagtgaaaatcattaagtgtcttgttcatttgtgagattgggaaaatgggtagaaattaagtttgttctttgcgagcttgtt 6674478  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  6674479 taagctaatttc 6674490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 10929753 - 10929864
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||   |||||||||||| ||||||||||||| ||||||||||    ||||||||||||||||| | ||||||||||||||||||||    
T  10929753 attgtaaacaccttggattagtgaaaatcattgagtgtcttgttctttggtgagatatggaaaatgggtagaaattatgtttgttctttgtgagcttgtt 10929852  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  10929853 gaagctaatttc 10929864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 18106292 - 18106181
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||  | ||||||||||||||| |||||||||| |||||||| |||||| ||  ||||||||||| |||||||||    
T  18106292 attgtaaacaccttgggtgagtgaaaattgttgagtgtcttgttcatcggtgagattggaaaaatggatagaaactatagttgttctttgcgagcttgtt 18106193  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  18106192 gaagctaatttc 18106181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 41366828 - 41366717
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||    ||||||||| ||||||||||||||||| | ||||||||||| ||||||||    
T  41366828 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcaagactgagattgagaaaatgggtagaaattatgtttgttctttgtaagcttgtt 41366729  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  41366728 taagctaatttc 41366717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 31218211 - 31218322
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg--aaaaaatgggtagaaattagggttgttctttgtgagcttg 226  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  31218211 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaatgg-tagaaattagggttgttctttgtgaacttg 31218308  T
Q  227 ttgaagctaatttc 240  Q
    |  |||||||||||    
T  31218309 tcaaagctaatttc 31218322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 44303808 - 44303920
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg--aaaaaatgggtagaaattagggttgttctttgtgagcttg 226  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||||| ||||||||||||||| ||||    
T  44303808 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaaagggtagaaattaaggttgttctttgtgaacttg 44303906  T
Q  227 ttgaagctaatttc 240  Q
    |  |||||||||||    
T  44303907 tcaaagctaatttc 44303920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 3772164 - 3772257
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||| || |||||||||||    
T  3772164 gagtgaaaatgattgagtgtcttgttcattggtgagattgagaaaattgatagaaattaggtttgttctttgtgagcttatttaagctaatttc 3772257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 17982607 - 17982718
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||    
T  17982607 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgt 17982705  T
Q  228 tgaagctaatttc 240  Q
      ||| |||||||    
T  17982706 caaagttaatttc 17982718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 19945574 - 19945463
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||| ||||||||||||||| |||||    
T  19945574 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaagggtagaaattatggttgttctttgtgaacttgt 19945476  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  19945475 caaagctaatttc 19945463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 8965904 - 8965794
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattaggg-ttgttctttgtgagcttgtt 228  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||||| |||| |||||    
T  8965904 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaa-aggtagaaattagggtttgttctttatgagtttgtt 8965806  T
Q  229 gaagctaatttc 240  Q
    |||| |||||||    
T  8965805 gaagttaatttc 8965794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 34254543 - 34254434
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| |||||     
T  34254543 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaa-gggtagaaattagggttgttctttgtgaacttgtc 34254446  T
Q  229 gaagctaatttc 240  Q
     ||| |||||||    
T  34254445 aaagttaatttc 34254434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 34256700 - 34256610
Alignment:
Q  150 gtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||  ||| |||||||    
T  34256700 gtgaaaatcattgagtgtcttgttcattggtgagattggaaaaat-ggtagaaattagggttgttctttgtgaacttgtcaaagttaatttc 34256610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 41365061 - 41364950
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||    ||||||||  ||||| ||||||||||||| |||||||||||||| |||||    
T  41365061 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcaagactgagattgggaaaattggtagaaattaggtttgttctttgtgagtttgtt 41364962  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  41364961 taagctaatttc 41364950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 4162454 - 4162562
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||| | ||||||||||||| |||||||||||||||| ||||||     ||||||||||||| ||||| |||||||||| || ||||||    
T  4162454 attgtaaacaccttgagcgagtgaaaatcattgagtgtcttgttcattagtgaga---ggaaaatgggtagaagttaggtttgttctttgagaacttgtt 4162550  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  4162551 gaagctaatttc 4162562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 40585599 - 40585669
Alignment:
Q  49 accaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagtt 121  Q
    ||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| ||||||||| ||||    
T  40585599 accaaaagagaagatccttag-gaaatcaaagactaagggttggttctcttttggggg-tagattctaaagtt 40585669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 1822282 - 1822357
Alignment:
Q  165 gtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| | ||||||| ||||| || ||||||||| |||| ||||||||||||||||||||||||||||||    
T  1822282 gtcttgttcatttgagagattgcaaaaa-ggatagaaattatggtttgttctttgtgagcttgttgaagctaatttc 1822357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 1856727 - 1856802
Alignment:
Q  165 gtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| | ||||||| ||||| || ||||||||| |||| ||||||||||||||||||||||||||||||    
T  1856727 gtcttgttcatttgagagattgcaaaaa-ggatagaaattatggtttgttctttgtgagcttgttgaagctaatttc 1856802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 240
Target Start/End: Complemental strand, 33655596 - 33655408
Alignment:
Q  51 caaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt-gtaaacgccttgggaga 149  Q
    |||||||||||||||||||  |||||||||| ||||||||| ||||||||   |||||| ||| ||||||||  |||||||| | ||||  |||||  ||    
T  33655596 caaaagagaagatccttaga-aaatcaaaggttaagggttggttctctttcaagggttaaattttagagttggaaaataatttgaaaacatcttggatga 33655498  T
Q  150 gtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||| |||| ||||||||||||||| |  || ||| || |||| | ||||||||||  |||||||| | ||| ||||||||||| |||||    
T  33655497 gtgaaa-tcattgagtgtcttgttcatggaagatatt-aagaaatagatagaaattagatttgttcttagagagtttgttgaagctgatttc 33655408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 8153717 - 8153798
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat---gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt 210  Q
    ||||| || ||||||  |||||||||||||   | ||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  8153717 ttgtatacaccttggatgagtgaaaatcattgagtgtgtcatgttcattggtgagattgagaaaat-ggtagaaattagggtt 8153798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 10020321 - 10020396
Alignment:
Q  49 accaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaa 127  Q
    |||||||||| |||||||||| ||||||||||||||||||||  || ||||||  ||||| ||||||||||||| ||||    
T  10020321 accaaaagaggagatccttag-gaaatcaaaggctaagggtttgtt-tctttt-tgggttggattctagagttgggaaa 10020396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 2627735 - 2627799
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||  |||| ||||||||||||||||||||| |||||| |||||  || ||||||||    
T  2627735 ttggtgagattgggaaaa-gggtagaaattagggttgttcattgtgaacttgtcaaatctaatttc 2627799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 3231944 - 3231900
Alignment:
Q  196 gtagaaattagggtt-gttctttgtgagcttgttgaagctaattt 239  Q
    |||||||||||| || |||||| ||||||||||||||||||||||    
T  3231944 gtagaaattaggctttgttcttcgtgagcttgttgaagctaattt 3231900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 10240175 - 10240219
Alignment:
Q  197 tagaaattagggtt-gttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||    
T  10240175 tagaaatttgggtttgttctttgtgagcttgttgaatctaatttc 10240219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 34311025 - 34310819
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  34311025 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaaaggttggttctcttttgggggttagattctagagttgggaaataattg 34310926  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||    
T  34310925 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaaattgttgaagc 34310826  T
Q  234 taatttc 240  Q
    |||||||    
T  34310825 taatttc 34310819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 2390141 - 2390347
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  2390141 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 2390240  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  2390241 taaacaccttgggagagcgaaaatcataagtgtcttgttcattggtgaaattcgaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 2390340  T
Q  234 taatttc 240  Q
    |||||||    
T  2390341 taatttc 2390347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 2361280 - 2361075
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| |||| |||||    
T  2361280 ggtgagtcttatgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgagg-ttagattctagagttgggaaacaattg 2361182  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  2361181 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 2361082  T
Q  234 taatttc 240  Q
    |||||||    
T  2361081 taatttc 2361075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 6431830 - 6432036
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  6431830 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaatgctaagggttggttctcttttgagggttagattctagagttgggaaacaattg 6431929  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| | |||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  6431930 taaacacattgggagagtgaaaatcatgagtgtcttgttcattggttagattgggaaaatgggtagaaattaggattgttctttgtgagcttgttgaagc 6432029  T
Q  234 taatttc 240  Q
    |||||||    
T  6432030 taatttc 6432036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 48599643 - 48599437
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||    
T  48599643 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttatattctagagttgggaaacaattg 48599544  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||  ||||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  48599543 taaacaccttggaggagtgaaaatcatgattgtcttgttcattggtgatattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 48599444  T
Q  234 taatttc 240  Q
    |||||||    
T  48599443 taatttc 48599437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 33 - 240
Target Start/End: Complemental strand, 4509016 - 4508809
Alignment:
Q  33 tggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt 132  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||| |||| ||||    
T  4509016 tggtgagtcttgtgaaaccaaaagataagatccttagtgaaatcaaaggctaaggattggttctcttttatgggttagattctagagttgggaaacaatt 4508917  T
Q  133 gtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||| ||||||    
T  4508916 gtaaacaccttgggagagtgaaaatcatgagtgtcttgttgattggtgagattgggaaaatgagtagaaattagggttgttctttgtgagcttattgaag 4508817  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  4508816 ctaatttc 4508809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 22269832 - 22270038
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||| |||| ||||     
T  22269832 ggtgagtcttgtgaaaccaaaatagaagatccttagtgaaatcataggctatgggttggttctcttttgggggttagattctagagttg-gaaacaattc 22269930  T
Q  134 taaacgccttgggagagtgaaaat-catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  22269931 taaacaccttgggagagtgaaaattcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 22270030  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  22270031 ctaatttc 22270038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 29608595 - 29608802
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  29608595 ggtgagtcttgtgaaaccaaaatagaagattcttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 29608694  T
Q  134 taaacgccttgggagagtgaaa-atcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| ||||| ||||| ||||  ||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  29608695 taaacaccttgagagagcgaaacttcatgagtgtcttgttctttggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 29608794  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  29608795 ctaatttc 29608802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 4512699 - 4512493
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| |||| |||||    
T  4512699 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttagttctcttttgggggttatattctagagttgggaaacaattg 4512600  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||||||||||   ||||||||||||||||| |||||||||||||||| || |||||||    
T  4512599 taaacaccttgggagagtgaaaatcatgagtgccttgttgattggtgagatttggaaaatgggtagaaattaaggttgttctttgtgagtttattgaagc 4512500  T
Q  234 taatttc 240  Q
    |||||||    
T  4512499 taatttc 4512493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 33 - 240
Target Start/End: Complemental strand, 4510858 - 4510651
Alignment:
Q  33 tggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||  ||||||||||||||||||| |||| ||||    
T  4510858 tggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaacgattggttctcttttatgggttagattctagagttgggaaacaatt 4510759  T
Q  133 gtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    |||||| |||||||||||||||||||||||||| |||||| ||||||||||||   ||||||||||||||||| |||||||||||||||| || ||||||    
T  4510758 gtaaacaccttgggagagtgaaaatcatgagtgccttgttgattggtgagatttggaaaatgggtagaaattaaggttgttctttgtgagtttattgaag 4510659  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  4510658 ctaatttc 4510651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 3258855 - 3259059
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  |||||||||| ||||| |||||||||||||||||||||||| |||| |||||    
T  3258855 ggtgagtcttgtgaaaccaaaagagaagatccttag-gaaatcaaac-ctaagggttggttctcatttgggggttagattctagagttgggaaacaattg 3258952  T
Q  134 taaacgccttgggagagtgaaaat-catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||    
T  3258953 taaacaccttgggaaagtgaaaattcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaactagggttgttctttgtgagcttgtttaag 3259052  T
Q  233 ctaattt 239  Q
    |||||||    
T  3259053 ctaattt 3259059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 240
Target Start/End: Complemental strand, 8359625 - 8359420
Alignment:
Q  36 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggtt-agattctagagttgagaaataattgt 134  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| || | ||||||||||| ||||||| ||||||  ||| ||||||    
T  8359625 tgagtcttgtgaaaccaaaagagaaaatccttagtgaaatcaaaggctaagagttggttattttttgggggtttagattcttgagttggaaaacaattgt 8359526  T
Q  135 aaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagct 234  Q
    |||| ||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||| || ||    
T  8359525 aaacaccttgagagagtgaaaatcatgagtgtcttgttcattggggagattgggaaaatgggtagaaattagggtttttctttgtgagcttgtttaaact 8359426  T
Q  235 aatttc 240  Q
    ||||||    
T  8359425 aatttc 8359420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 34 - 182
Target Start/End: Complemental strand, 6360221 - 6360073
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||     
T  6360221 ggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattt 6360122  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgag 182  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  6360121 taaacaccttgggagaatgaaaatcatgagtgacttgttcattggtgag 6360073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 47674157 - 47674046
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  47674157 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttgtgaacttgtt 47674058  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  47674057 gaagctaatttc 47674046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 30024945 - 30024835
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  30024945 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttcattgtgagcttgttg 30024846  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  30024845 aagctaatttc 30024835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 31733183 - 31733072
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |    
T  31733183 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagactgagaaaatgggtagaaattagggttgttctttgtgagcttggt 31733084  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  31733083 gaagctaatttc 31733072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 43864198 - 43864309
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  43864198 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaagtgggtagaaattagggttgttctttgtgaacttgtt 43864297  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  43864298 gaagctaatttc 43864309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 47676350 - 47676239
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||    
T  47676350 attgtaaacaccttgggtgagtgaaaatcaatgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttgtgaatttgtt 47676251  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  47676250 gaagctaatttc 47676239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 1113611 - 1113722
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    |||||||||  |||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  1113611 attgtaaacaacttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgagaaaatggatagaaattagggttgttctttgtgagcttgtt 1113710  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  1113711 gaagctaatttc 1113722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 48491533 - 48491644
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  48491533 attgtaaacactttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 48491632  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  48491633 gaagctaatttc 48491644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 4586115 - 4586225
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  4586115 attgtaaacaccttgggtgagtgtaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 4586214  T
Q  229 gaagctaattt 239  Q
    |||||||||||    
T  4586215 gaagctaattt 4586225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 26417270 - 26417381
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||| | | ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  26417270 attgtaaacaccttgagcgggtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgtt 26417369  T
Q  229 gaagctaatttc 240  Q
    |||| |||||||    
T  26417370 gaagataatttc 26417381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 27347771 - 27347882
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| ||||||    
T  27347771 attgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattaggattgttctttgtgaacttgtt 27347870  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  27347871 gaagctaatttc 27347882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 38671436 - 38671326
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||| ||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  38671436 attgtaaacaccttgggtgagcgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgtt 38671337  T
Q  229 gaagctaattt 239  Q
     ||||||||||    
T  38671336 taagctaattt 38671326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 4538755 - 4538643
Alignment:
Q  129 aattgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  || |    
T  4538755 aattgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaatgggtagaaattagggttgttctttatgaaatttt 4538656  T
Q  228 tgaagctaatttc 240  Q
    | |||||||||||    
T  4538655 ttaagctaatttc 4538643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 12098073 - 12097962
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    |||||||||  |||||| ||||||||||||| ||||||||||||||||||| ||||||  |||||||||||||||||||||||||| |||||||||||||    
T  12098073 attgtaaacatcttgggtgagtgaaaatcattgagtgtcttgttcattggttagattgggaaaatgggtagaaattagggttgttcattgtgagcttgtt 12097974  T
Q  229 gaagctaatttc 240  Q
    |||| |||||||    
T  12097973 gaagttaatttc 12097962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 14070047 - 14069936
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| |||||     
T  14070047 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtc 14069948  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  14069947 aaagctaatttc 14069936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 14380075 - 14379964
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| |||||     
T  14380075 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtc 14379976  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  14379975 aaagctaatttc 14379964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 18126598 - 18126709
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    |||||||||  |||||| ||||||||||||| |||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||    
T  18126598 attgtaaacaacttgggtgagtgaaaatcattgagtgttttgttcattggtgagattggaaaaatgtgtagaaattagggttgttctttgtgaacttgtt 18126697  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  18126698 caagctaatttc 18126709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 31105607 - 31105496
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||  || |||||||||||||||||    
T  31105607 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgggtagaaattagattttttctttgtgagcttgtt 31105508  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  31105507 gaagctaatttc 31105496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 36146621 - 36146510
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattag-ggttgttctttgtgagcttgtt 228  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||| | ||||| ||||||||||||||    
T  36146621 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagagtttgttatttgtgagcttgtt 36146522  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  36146521 gaagctaatttc 36146510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 22328707 - 22328494
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttggggg-ttagattctagagttgagaaataatt 132  Q
    ||||| ||||| ||||| ||||||||| ||||||| || ||||||| ||||||||||| |||||||||||||| |||||| ||| ||||| |||| ||||    
T  22328707 ggtgaatcttgggaaactaaaagagaatatcctta-tgtaatcaaaagctaagggttggttctcttttggggggttagatcctaaagttgggaaacaatt 22328609  T
Q  133 gtaaacgccttgggagagtgaaaatcat-gagtgtcttgtt----cattggtgagattgaaaa-aatgggtagaaattagggtt-gttctttgtgagctt 225  Q
    |||||| ||||| | || |||||||||| ||||||||||||    |||| | |||||||  || || || |||||||||| ||| |||||||||||||||    
T  22328608 gtaaacaccttgagggaatgaaaatcattgagtgtcttgtttgttcattagagagattgggaagaaaggttagaaattagagtttgttctttgtgagctt 22328509  T
Q  226 gttgaagctaatttc 240  Q
    |||||||||||||||    
T  22328508 gttgaagctaatttc 22328494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 240
Target Start/End: Original strand, 31518752 - 31518860
Alignment:
Q  133 gtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaa 231  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||||| |||||    
T  31518752 gtaaacaccttgggtgagtgaaaatcatcgagtgtcttgttcattggtgagattgggaaaataggtagaaattaggtttgttctttgtgagcttattgaa 31518851  T
Q  232 gctaatttc 240  Q
    |||| ||||    
T  31518852 gctagtttc 31518860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 8153296 - 8153407
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||     
T  8153296 attgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgagtagaaattagggttgttctttgtgagattgtc 8153395  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  8153396 aaagctaatttc 8153407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 41317648 - 41317537
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| |||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||     
T  41317648 attgtaaacaccttggatgagtgaaaatcattgagtctcttgttcattggtgagattgggaaaattggtagaaattagggttgttctttgtgagcttgtc 41317549  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  41317548 aaagctaatttc 41317537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 48489385 - 48489496
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcatgag-tgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||  | ||||||    
T  48489385 attgtaaacaccttgggtgagtgaaaatcattaaatgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgaaaacttgtt 48489484  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  48489485 gaagctaatttc 48489496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 23554994 - 23555105
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg--aaaaaatgggtagaaattagggttgttctttgtgagcttg 226  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  23554994 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaatgg-tagaaattagggttgttctttgtgaacttg 23555091  T
Q  227 ttgaagctaatttc 240  Q
    ||||||||||||||    
T  23555092 ttgaagctaatttc 23555105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 24526111 - 24525999
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagg-gttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||  |||||||||||||||||||    
T  24526111 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgaaattgggaaaatgggtagaaattaggttttgttctttgtgagcttgt 24526012  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  24526011 caaagctaatttc 24525999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 496197 - 496086
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcatg-agtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||  ||||||| |||||||||||||  ||||| ||||| ||| |||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  496197 attgtaaaaaccttgggtgagtgaaaatcatttagtgttttgttaatttgtgagattgggaaaatgggtagaaattagggtagttctttgtgagcttgtt 496098  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  496097 gaagctaatttc 496086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 35853869 - 35853979
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| |||||     
T  35853869 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtc 35853967  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  35853968 aaagctaatttc 35853979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 41649224 - 41649125
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||||||  |||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||||    
T  41649224 attgtaaacaccttgggtaagtgaaaatcattgagtgtcttgttcatttgtgagattggaaaaattggtagaaattaggtttgttctttgtgagcttgtt 41649125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 4253742 - 4253632
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgtt 228  Q
    |||||||| |||| || ||||||||||||| |||| |||||||||||||||| ||||  ||||||| |||||||||||||| ||||||||||||||||||    
T  4253742 ttgtaaacaccttaggtgagtgaaaatcattgagtttcttgttcattggtgaaattggtaaaatgg-tagaaattagggtttgttctttgtgagcttgtt 4253644  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  4253643 gaagctaatttc 4253632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 4178729 - 4178839
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||| ||||      
T  4178729 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaaggtagaaattagggttgttctttgtgaacttggg 4178827  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  4178828 aaagctaatttc 4178839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 23565274 - 23565164
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagatt--gaaaaaatgggtagaaattaggg-ttgttctttgtgagcttgt 227  Q
    |||||||| ||||||| ||||||| || |  ||||||||||||||||||||||||  |||||||| |||||||||||||  |||||||||||||||||||    
T  23565274 ttgtaaacaccttgggtgagtgaacatga--agtgtcttgttcattggtgagattaggaaaaaataggtagaaattaggtcttgttctttgtgagcttgt 23565177  T
Q  228 tgaagctaatttc 240  Q
    |||| ||||||||    
T  23565176 tgaaactaatttc 23565164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 25767171 - 25767064
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| |||||||||||||||||   |||||| ||||| |||||||||||||||||||||||||||| |||||     
T  25767171 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattg---agattggaaaaaagggtagaaattagggttgttctttgtgaacttgtc 25767076  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  25767075 aaagctaatttc 25767064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 29991009 - 29991118
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  |||| || ||||||||||||||||| ||||||| |||||     
T  29991009 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaa-ggatagaaattagggttgttatttgtgaacttgtc 29991106  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  29991107 aaagctaatttc 29991118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 48408757 - 48408867
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  |||| ||||||||||||  |||||||||||| | |||||     
T  48408757 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaagggtagaaattaatgttgttctttgtaaacttgtc 48408855  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  48408856 aaagctaatttc 48408867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 23343934 - 23344040
Alignment:
Q  135 aaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaag 232  Q
    |||| ||||||| ||||||||||||| || ||||| ||||||||||||||||   |||| |||||||||||| ||||  |||||||||||||||||||||    
T  23343934 aaacaccttgggtgagtgaaaatcattgaatgtctagttcattggtgagatttggaaaa-gggtagaaattaaggtttattctttgtgagcttgttgaag 23344032  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  23344033 ctaatttc 23344040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 5514222 - 5514113
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgtt 228  Q
    |||||||| |||| |  ||||||||||||| |||| ||||||||||| | ||||||||||||| | |||||||||| | || ||||||||||||||||||    
T  5514222 ttgtaaacaccttcgatgagtgaaaatcattgagtttcttgttcatttgagagattgaaaaaa-gagtagaaattatgttttgttctttgtgagcttgtt 5514124  T
Q  229 gaagctaattt 239  Q
    |||||||||||    
T  5514123 gaagctaattt 5514113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 2761516 - 2761439
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattag 206  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||    
T  2761516 attgtaaacacattgggtgagtgaaaatcatcgagtgtcttgttcattggtgagattgggaaaattggtagaaattag 2761439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 19502132 - 19502243
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  |||||| |||||| |||||||||||||| |||||||||||  ||||| || ||||||||| ||||||| |||||||||||||    
T  19502132 attgtaaacaccttggt-gagtgagaatcattgagtgtcttgttcagtggtgagattgcgaaaaaaggttagaaattaaggttgttttttgtgagcttgt 19502230  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  19502231 caaagctaatttc 19502243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 1360462 - 1360256
Alignment:
Q  35 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttggggg-ttagattctagagttgagaaataatt- 132  Q
    ||||||||||  |||||||||||||| ||  || | ||||||||||| || || ||| |||||||||||||| ||||||||||||||||| ||| ||||     
T  1360462 gtgagtcttggaaaaccaaaagagaatatttttgg-gaaatcaaaggatatggattggttctcttttggggggttagattctagagttgaaaaacaattg 1360364  T
Q  133 gtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattg-gtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttga 230  Q
    | |||| |||| || ||||| |||||| ||||| |||||||||| |  ||||||||  ||||  ||||||||||||| ||  |||| | || ||||||||    
T  1360363 ggaaacacctttggtgagtg-aaatcattgagtctcttgttcatggaatgagattgggaaaa-aggtagaaattaggttttgtcttggagaacttgttga 1360266  T
Q  231 agctaatttc 240  Q
    ||| ||||||    
T  1360265 agcgaatttc 1360256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 25615857 - 25615918
Alignment:
Q  179 tgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||  ||||||||||||||||||| ||||||| |||| ||||||| |||||||||||    
T  25615857 tgagattgggaaaatgggtagaaattaggtttgttctatgtgcgcttgtttaagctaatttc 25615918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 36574728 - 36574619
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaatt-agggttgttctttgtgagcttgtt 228  Q
    |||||||| |||| || |||||||||| || |||||||||||| ||||| |||||||   |||  |||||||||| ||  |||||||||||||| |||||    
T  36574728 ttgtaaacaccttaggtgagtgaaaattatcgagtgtcttgtttattggagagattggggaaa--ggtagaaattaagatttgttctttgtgagtttgtt 36574631  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  36574630 gaagctaatttc 36574619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 39731369 - 39731420
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  39731369 ttggtgagattggaaaaa-gggtagaaattagggttgttctttgtgaacttgt 39731420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 2759339 - 2759300
Alignment:
Q  201 aattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  2759339 aattagggttgttctttgtgaacttgttgaagctaatttc 2759300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 24514974 - 24514918
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg 186  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  24514974 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattg 24514918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 31518917 - 31518963
Alignment:
Q  189 aaaatgggtagaaattagggttgttctttgtgagcttgttgaagcta 235  Q
    ||||| ||||||||||||| ||||||| ||||||||| |||||||||    
T  31518917 aaaataggtagaaattaggtttgttctctgtgagcttattgaagcta 31518963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 5116494 - 5116550
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttg 91  Q
    ||||||||||| | ||||||||||||||||||| || ||||||||||| |||| ||||    
T  5116494 ggtgagtcttgggtaaccaaaagagaagatcctcag-gaaatcaaaggttaagagttg 5116550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 32358190 - 32358157
Alignment:
Q  207 ggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||| |||||||||||||||||||||||||||    
T  32358190 ggttgtgctttgtgagcttgttgaagctaatttc 32358157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 43504323 - 43504259
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||  |||| ||||||||||||||||||||| |||||| |||||  || ||||||||    
T  43504323 ttggtgagattgggaaaa-gggtagaaattagggttgttcattgtgaacttgtcaaatctaatttc 43504259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 23794119 - 23794039
Alignment:
Q  49 accaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt 132  Q
    |||||||||| ||||||||||  |||||||||||||| ||||| |||  |||  | ||||||||||||||||||| ||| ||||    
T  23794119 accaaaagaggagatccttaga-aaatcaaaggctaatggttggttcatttt--gtggttagattctagagttgaaaaacaatt 23794039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 43363622 - 43363578
Alignment:
Q  195 ggtagaaattagggttgttctttgtgagcttgttgaagctaattt 239  Q
    ||||||||||||| |||||||| | |||||||||||| |||||||    
T  43363622 ggtagaaattaggtttgttcttggagagcttgttgaaactaattt 43363578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 43363723 - 43363664
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgatt 94  Q
    ||||| ||||| || |||||||||||||||| |||| ||||| ||| ||||||||||||||    
T  43363723 ggtgaatcttgagagaccaaaagagaagatctttag-gaaattaaatgctaagggttgatt 43363664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 40147120 - 40147326
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  40147120 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 40147219  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  40147220 taaacaccttgggagagtggaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttcttcgtgagcttgttgaagc 40147319  T
Q  234 taatttc 240  Q
    |||||||    
T  40147320 taatttc 40147326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 38746864 - 38747070
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  38746864 ggtgagtcttgtgaaaccaaaagagaagatccttattgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 38746963  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||||||||||||||||||||| |||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  38746964 taaacaccttgggagagtgaaaatcatgagtatcttgttcattaatgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 38747063  T
Q  234 taatttc 240  Q
    |||||||    
T  38747064 taatttc 38747070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 213328 - 213530
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||| |||| |||||    
T  213328 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggtt----ctcttttgggggttagattctagagttgggaaacaattg 213423  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||    
T  213424 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttaaagc 213523  T
Q  234 taatttc 240  Q
    |||||||    
T  213524 taatttc 213530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 37 - 240
Target Start/End: Original strand, 5057909 - 5058110
Alignment:
Q  37 gagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaa 136  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||    
T  5057909 gagtcttgtgaaaccaaaagagaagatccttagtaaaatcaaaggctaagggttggttctcttttgggggttagattctagagttggaaaacaattgtaa 5058008  T
Q  137 acgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaa 236  Q
    || |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||||||||||     
T  5058009 acaccttggaagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttc--tgtgagcttgttgaagctat 5058106  T
Q  237 tttc 240  Q
    ||||    
T  5058107 tttc 5058110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 27015391 - 27015593
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  27015391 ggtgagtcttgtaaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 27015490  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    |||||  |||||||||||||||||||||||||| ||| |||||||||||||||  ||||| ||||||||||||||||||||||||||| |||||||||||    
T  27015491 taaacatcttgggagagtgaaaatcatgagtgt-ttggtcattggtgagattgggaaaataggtagaaattagggttgttctttgtgaacttgttgaagc 27015589  T
Q  234 taat 237  Q
    ||||    
T  27015590 taat 27015593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 28278175 - 28278381
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  28278175 ggtgagtcttgtgaaatcaaaagagaagattgttagtgaaatcaaatgctaagggttggctctcttttaggggttagattctagagttgggaaacaattg 28278274  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||    
T  28278275 taaacacattgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattatggttgttctttgtgagcttgttgaagc 28278374  T
Q  234 taatttc 240  Q
    |||||||    
T  28278375 taatttc 28278381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 27637925 - 27637716
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagaga--agatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataat 131  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||  |||  |||||||||||||||||||| ||||||||| |||| |||    
T  27637925 ggtgagtcttgtgaaaccaaaagagagaagatccttagtgaaatcaaagactaaaagtttgttctcttttgggggttagatgctagagttgggaaacaat 27637826  T
Q  132 tgtaaacgccttgggagagtgaaaat-catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttga 230  Q
    ||| ||| |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |    
T  27637825 tgtgaacaccttggaagagtgaaaattcatgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttatgagcttgttta 27637726  T
Q  231 agctaatttc 240  Q
    | ||||||||    
T  27637725 aactaatttc 27637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 33 - 240
Target Start/End: Complemental strand, 16641250 - 16641040
Alignment:
Q  33 tggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt 132  Q
    ||||||||||||||||||||||||||||||| ||||   |||||||||||||| ||||| ||||||||||||| |||||||||||||||| | || | ||    
T  16641250 tggtgagtcttgtgaaaccaaaagagaagatacttaaa-aaatcaaaggctaaaggttggttctcttttggggattagattctagagttggggaacattt 16641152  T
Q  133 gtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagatt--gaaaaaatgggtagaaattag-ggttgttctttgtgagcttgtt 228  Q
    |||||| ||||| | |||||||| ||| | ||||||||||||||||| ||||||  |||||||  |||||||||||| | ||||||||||||||||||||    
T  16641151 gtaaacaccttgagtgagtgaaattcattaagtgtcttgttcattggcgagattgagaaaaaaatggtagaaattagtgtttgttctttgtgagcttgtt 16641052  T
Q  229 gaagctaatttc 240  Q
    |||||| |||||    
T  16641051 gaagctgatttc 16641040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 42426449 - 42426338
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||    
T  42426449 attgtaaacaccttgggtgagtgaaaattattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttgtgaaattgtt 42426350  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  42426349 gaagctaatttc 42426338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 533723 - 533833
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| | ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  533723 attgtaaacaccttgggtgagtgaaaatcattgcgtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttggtctttgtgagcttgtt 533822  T
Q  229 gaagctaattt 239  Q
    |||||||||||    
T  533823 gaagctaattt 533833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 8566160 - 8566049
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  8566160 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgagaaaatgggtagaacttaggtttgttctttgtgagcttgtt 8566061  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  8566060 taagctaatttc 8566049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 13488157 - 13488268
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  13488157 attgtaaacaccttgggtgagtgaaaattattgagtgtcttgttcattggtaagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 13488256  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  13488257 gaagctaatttc 13488268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 33831634 - 33831745
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  33831634 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttattcatttgtgagattggaaaaatgggtagaaattaggtttgttctttgtgagcttgtt 33831733  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  33831734 taagctaatttc 33831745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 39468763 - 39468652
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||| | ||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  39468763 attgtaaacaccttgagtgagtgaaaatcattgagtgtcttgttcattagtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 39468664  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  39468663 gaagctaatttc 39468652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 42428644 - 42428533
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||| ||||||    
T  42428644 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattatggtttttctttgtgaacttgtt 42428545  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  42428544 gaagctaatttc 42428533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 19806338 - 19806447
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||    
T  19806338 attgtaaacaccttgggtgagtgaaa-tcattgagtgtcttgttcattggtgagattggaaaaatgggtagaaatta-ggttgttctttgtgagtttgtt 19806435  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  19806436 gaagctaatttc 19806447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 133 - 240
Target Start/End: Original strand, 537982 - 538090
Alignment:
Q  133 gtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaa 231  Q
    |||||| ||||||| ||||||||||||| | |||||||||||||| |||||||||  ||||||||||||||||| ||||| |||||||||||||||||||    
T  537982 gtaaacaccttgggtgagtgaaaatcattgcgtgtcttgttcattagtgagattgggaaaatgggtagaaattaaggttgctctttgtgagcttgttgaa 538081  T
Q  232 gctaatttc 240  Q
    |||||||||    
T  538082 gctaatttc 538090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 5887630 - 5887519
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| || ||||||||||||| |||||||||| ||||||| ||||||||||  ||||||||||||||||||||    
T  5887630 attgtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcatttgtgagattgagaaaatggatagaaattagatttgttctttgtgagcttgtt 5887531  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  5887530 taagctaatttc 5887519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 13239706 - 13239816
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||| |||||||||| ||||||    
T  13239706 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaaatggtagaaattagggtttttctttgtgaacttgtt 13239804  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  13239805 gaagctaatttc 13239816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 28750869 - 28750758
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    |||| |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||  |||||    
T  28750869 attgaaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttatgaaattgtt 28750770  T
Q  229 gaagctaatttc 240  Q
    |||| |||||||    
T  28750769 gaagttaatttc 28750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 32636778 - 32636889
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||     
T  32636778 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttattcattggtgagattgggaaaatgggtagaaattatggttgttctttgtgaacttgtc 32636877  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  32636878 aaagctaatttc 32636889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 4160492 - 4160611
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||| ||||| |||||||||||||||||||||||| | ||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||    
T  4160492 ggtgaatcttgggaaaccaaaagagaagatccttag-gtaattaaaggctaagggttggttctcttttgggggttagattc-agagttgagaaacaattg 4160589  T
Q  134 taaacgccttgggagagtgaaa 155  Q
    ||||| | ||||  ||||||||    
T  4160590 taaacacattggttgagtgaaa 4160611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 16452035 - 16452145
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||||| | ||||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||||||||||    
T  16452035 attgtaaacaccttggta-agtgacaatcattgagtgtcttgttcattgatgagattggaaaaatgggtagaaattaagtttgttctttctgagcttgtt 16452133  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  16452134 gaagctaatttc 16452145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 13343015 - 13343126
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||    
T  13343015 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgt 13343113  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  13343114 caaagctaatttc 13343126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 3075872 - 3075761
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||| |  ||||||||||||| |||||||| ||||||| |||||||||| ||||| ||||||||||||| |||||||||||||||||| |    
T  3075872 attgtaaacacctttgatgagtgaaaatcattgagtgtctcgttcatttgtgagattgagaaaataggtagaaattaggtttgttctttgtgagcttgct 3075773  T
Q  229 gaagctaatttc 240  Q
    ||| ||||||||    
T  3075772 gaatctaatttc 3075761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 25412716 - 25412825
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| |||||     
T  25412716 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaa-gggtagaaattagggttgttctttgtgaacttgtc 25412813  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  25412814 aaagctaatttc 25412825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 31182927 - 31183037
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||| || ||||||||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||||| |||||    
T  31182927 attgtaaacaccttaggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggaaaa-tgggtagaaattaggattgttctttgtgagtttgtt 31183025  T
Q  229 gaagctaatttc 240  Q
     ||| |||||||    
T  31183026 taagttaatttc 31183037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 30182560 - 30182653
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||| |||||  |||||||||||    
T  30182560 gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttc 30182653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 36074258 - 36074145
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg---aaaaaatgggtagaaattagggttgttctttgtgagctt 225  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||| || |||    
T  36074258 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaaaagggtagaaattagggttgttctttgcgaactt 36074160  T
Q  226 gttgaagctaatttc 240  Q
    ||  |||||||||||    
T  36074159 gtcaaagctaatttc 36074145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 42310130 - 42310038
Alignment:
Q  149 agtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| |||||||||| |||||||||||||||| ||| ||||||||||| | | ||| ||||||||||||||||||||||||||||    
T  42310130 agtgaaaatcattgagtgtcttgctcattggtgagattgagaaattgggtagaaatcaagtttgatctttgtgagcttgttgaagctaatttc 42310038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 30683134 - 30683027
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| |||||||||||||||| |||||||||  |||| ||||||||||||||   ||||||||||| ||||||    
T  30683134 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaaagggtagaaattagg---gttctttgtgaacttgtt 30683039  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  30683038 gaagctaatttc 30683027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 240
Target Start/End: Original strand, 35616029 - 35616234
Alignment:
Q  33 tggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt 132  Q
    |||||||||||| ||||||||||| ||||||| | |  ||||||||||||| || |||||||||||||| | |||||||||||||||||  |||| ||||    
T  35616029 tggtgagtcttgggaaaccaaaagcgaagatcatca-agaaatcaaaggct-agagttgattctctttt-gtggttagattctagagtttggaaacaatt 35616125  T
Q  133 -gtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattgg-tgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
     | |||| ||||||| ||||| |||||| ||||| |||||||||  ||  ||||||| | ||||| |||||||||||| |||||||| | ||||| |||     
T  35616126 aggaaacaccttgggtgagtg-aaatcattgagtctcttgttcacgggaagagattg-agaaatgagtagaaattaggtttgttcttggagagctcgttt 35616223  T
Q  230 aagctaatttc 240  Q
    ||| |||||||    
T  35616224 aagttaatttc 35616234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 240
Target Start/End: Original strand, 316622 - 316827
Alignment:
Q  33 tggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt 132  Q
    |||||| ||||| || |||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||| || |||||  ||| ||||    
T  316622 tggtgaatcttgggagaccaaaagagaaaatcct-ag-gaaatcaaaggctaagggttggttctcttttgggggttagattttaaagttggaaaacaatt 316719  T
Q  133 gtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtga-gattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttga 230  Q
    |  ||   || ||| |||||||| |||| | || ||||||| |  ||  | |||||| |||| || ||||||||||| |||||||| | |||||||||||    
T  316720 gggaaaaactcgggtgagtgaaa-tcattgggtctcttgtttaggggaaaagattgagaaaaagg-tagaaattaggtttgttcttggagagcttgttga 316817  T
Q  231 agctaatttc 240  Q
    ||||||||||    
T  316818 agctaatttc 316827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 13695904 - 13695794
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgtt 228  Q
    |||||||| ||||| | ||||||||||||| |||| |||| ||| |||| |||||||  |||| ||||| ||||||||||| ||||||||||||||||||    
T  13695904 ttgtaaacaccttgtgtgagtgaaaatcattgagtatctttttctttggagagattgggaaaa-gggtacaaattagggtttgttctttgtgagcttgtt 13695806  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  13695805 aaagctaatttc 13695794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 14689715 - 14689622
Alignment:
Q  38 agtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||| || ||||||||| |||||||||||  ||||||||||||| |||||| ||||||||| |||| ||||||||||||||| |||| |||||    
T  14689715 agtcttgggacaccaaaagaaaagatccttaga-aaatcaaaggctaggggttggttctctttt-ggggatagattctagagttgtgaaacaattg 14689622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 33906338 - 33906288
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaa 85  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  33906338 ggtgagtcttgggaaaccaaaagagaagatccttag-gaaatcaaaggctaa 33906288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 9049554 - 9049445
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    |||||||| | ||||| |||| ||||||| ||||||||||||| ||| ||||| |||  ||||||  |||||||||| |||  | |||||||||||||||    
T  9049554 ttgtaaacactttgggtgagtaaaaatcactgagtgtcttgttgattagtgagtttgggaaaatga-tagaaattagtgtttgtttttgtgagcttgttg 9049456  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  9049455 aagctaatttc 9049445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 16409475 - 16409539
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||| |||||  || ||||||||    
T  16409475 ttggtgagattggaaaaa-gggtagaaattagggttgttctttgtgaacttgtcaaatctaatttc 16409539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 42926847 - 42926904
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattg 186  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  42926847 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttctttggtgagattg 42926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 30802842 - 30802892
Alignment:
Q  188 aaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaattt 239  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  30802842 aaaaatgggtagaa-ttaggtttgttctttgtgagcttgttgaaactaattt 30802892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 26177883 - 26177946
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||| |||||  || ||||||||    
T  26177883 ttggtgagattggaaaa--gggtagaaattagggttgttctttgtgaacttgtcaaatctaatttc 26177946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 8019464 - 8019542
Alignment:
Q  51 caaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt 132  Q
    |||||| ||||||||||||  |||||||||||||||| ||| || | ||||||||||||||||||| ||||| |||||||||    
T  8019464 caaaagtgaagatccttaga-aaatcaaaggctaagg-ttggttat-ttttgggggttagattctatagttgggaaataatt 8019542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 18441816 - 18441752
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||| |||||  || ||||||||    
T  18441816 ttggtgagattggaaaaa-gggtagaaattagggttgttccttgtgaacttgtcaaatctaatttc 18441752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 21205949 - 21205874
Alignment:
Q  46 gaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttg 122  Q
    ||||| ||||| ||||| ||||| ||||||||||| |||||| ||| |||||||||| |||||||||| | ||||||    
T  21205949 gaaactaaaagtgaagaacctta-tgaaatcaaagactaaggattggttctcttttgagggttagattatggagttg 21205874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 37439105 - 37439206
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattg--------aaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatt 238  Q
    ||||||||||||| ||||||||| ||||||||||||||||        ||| ||  ||||||||||||||||||||||||||| |||||  ||| |||||    
T  37439105 gagtgaaaatcattgagtgtcttattcattggtgagattgggaaggaaaaataaaaggtagaaattagggttgttctttgtgaacttgtcaaagttaatt 37439204  T
Q  239 tc 240  Q
    ||    
T  37439205 tc 37439206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 10700796 - 10700753
Alignment:
Q  195 ggtagaaattagggttgttctttgtgagcttgttgaagctaatt 238  Q
    ||||||||||||| |||||||| | |||||||||||||||||||    
T  10700796 ggtagaaattaggtttgttcttagagagcttgttgaagctaatt 10700753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 26170774 - 26170837
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| ||||  |||||||||||||| ||||||||||||| |||||  || ||||||||    
T  26170774 ttggtgagattggaaaa--gggtagaaattaggattgttctttgtgaacttgtcaaatctaatttc 26170837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 9789392 - 9789328
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| ||||| |||||||||||| |||||||| |||||| |||||  || ||||||||    
T  9789392 ttggtgagattggaaaaa-gggtagaaattaaggttgttccttgtgaacttgtcaaatctaatttc 9789328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 2e-94; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 54882879 - 54883085
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  54882879 ggtgagtctcgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 54882978  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||    
T  54882979 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttttttgtgagcttgttgaagc 54883078  T
Q  234 taatttc 240  Q
    |||||||    
T  54883079 taatttc 54883085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 37 - 240
Target Start/End: Original strand, 2209575 - 2209778
Alignment:
Q  37 gagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaa 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  2209575 gagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatgggttggttctcttttgggggttagattctagagttgggaaataattgtaa 2209674  T
Q  137 acgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaa 236  Q
    || |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  2209675 acaccttgggagagtgaaaatcatgagtgtcttgttcattgttgagattgggaaaatgggtagaaattagggtttttctttgtgagcttgttgaagctaa 2209774  T
Q  237 tttc 240  Q
    ||||    
T  2209775 tttc 2209778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 6655815 - 6656021
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||| |||| |||||    
T  6655815 ggtgagtcttgtgaaaccaaaagagaagatcattagtaaaatcaaaggctaaaggttgtttctctttttggggttagattctagagttgggaaacaattg 6655914  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  6655915 taaacaccttgggagagtgaaaatcatgagtgtcttgttcacttgtgagattgaaaaaatgggtagaaattaaggttgttctttgtgaacttgttgaagc 6656014  T
Q  234 taatttc 240  Q
    |||||||    
T  6656015 taatttc 6656021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 50674155 - 50673950
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||    
T  50674155 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttggaaaacaattg 50674056  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||| |||||||| |||||||||| |||||| |||||||||||| ||| |||||||||||||||||||||    
T  50674055 taaacaccttgggagagtgaaaatcatgagtgtcgtgttcatttgtgagattgagaaaatgagtagaaattaggattg-tctttgtgagcttgttgaagc 50673957  T
Q  234 taatttc 240  Q
    |||||||    
T  50673956 taatttc 50673950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 12073251 - 12073456
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  12073251 ggtgagtcttatgaaaccaaaagagaagatccttagtgaaatcaaatgctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 12073350  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||||| ||||||||||||||||||||| | |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  12073351 taaacaccttgggagtgtgaaaatcatgagtgtcttgcttattggtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaagc 12073450  T
Q  234 taattt 239  Q
    ||||||    
T  12073451 taattt 12073456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 41964274 - 41964479
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||    
T  41964274 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctctttt-ggggttagattctagagttgggaaacaattg 41964372  T
Q  134 taaacgccttgggagagtgaaaa-tcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| |||||||| |||||||| ||||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||| |||    
T  41964373 taaacaccttgggaaagtgaaaattcatgagtgtcttgttcgttggtgaaattgggaaaatgggtagaaattagggttgttctttgtgagcttgtttaag 41964472  T
Q  233 ctaattt 239  Q
    |||||||    
T  41964473 ctaattt 41964479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 55085673 - 55085468
Alignment:
Q  35 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgt 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| ||||||    
T  55085673 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcctttgggggttagattctagagttcggaaacaattgt 55085574  T
Q  135 aaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    |||| ||||||| |||||||||||| ||| |||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||    
T  55085573 aaacaccttgggtgagtgaaaatcattgactgtcttgttcattggtgagattg-gaaaataggtagaaattaaggttgttctttgtgagcttgttgaagc 55085475  T
Q  234 taatttc 240  Q
    |||||||    
T  55085474 taatttc 55085468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 35662301 - 35662506
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||| |||| |||||    
T  35662301 ggtgagtcttgtgaaaccaaaagagaagatccttag-gaaatcaaag-ctaagggttggttctcttttgggtgttagattctagagttgggaaacaattg 35662398  T
Q  134 taaacgccttgggagagtgaaaa-tcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  35662399 taaacaccttgagagtgtgaaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttatgagtttgttgaag 35662498  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  35662499 ctaatttc 35662506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 64 - 240
Target Start/End: Original strand, 40632334 - 40632510
Alignment:
Q  64 ccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaaacgccttgggagagtgaaaatcatgag 163  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  40632334 ccttagtgaaatcaaatgttaagggttggttctcttttgggggttagattctagagttgagaaacaattgtaaacaccttgggagagtgaaaatcatgag 40632433  T
Q  164 tgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40632434 tgtcttgttcattggtgagattgggaaaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttc 40632510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 8665266 - 8665473
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | |||| || |||||||||||||||||||| |||||| |||| |||||    
T  8665266 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggttatgtgttggttttcttttgggggttagattctggagttgggaaacaattg 8665365  T
Q  134 taaacgccttgggagagtgaaaa-tcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||||||    
T  8665366 taaacaccttggaagagtgaaaattcatgagtgtcttgttcattggtgagaatgggaaaatgggtagaaattagggttgttctttgagagcttgttgaag 8665465  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  8665466 ctaatttc 8665473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 379238 - 379445
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  379238 ggtgagtcttgtgaaatcaaaagagaagatccttag-gaaatcaaaggctaagggttggttctcttttgtgggttagattctagagttgggaaacaattg 379336  T
Q  134 taaacgccttgggagagtgaaaat--catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaa 231  Q
    ||||| ||||||||||||||||||   || ||| ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  379337 taaacaccttgggagagtgaaaattcaattagtatcttgttcatttgtgagattgagaaaatgggtagaaattaggtttgttctttgtgagcttgttgaa 379436  T
Q  232 gctaatttc 240  Q
    |||||||||    
T  379437 gctaatttc 379445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 27417270 - 27417068
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||  |||| |||||    
T  27417270 ggtgagtcttgtaaaaccaaaaaagaagatccttagtgaaatcaaagactaagggttggttctcttttgggggttagattcttgagttttgaaacaattg 27417171  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    |||||     |||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||    
T  27417170 taaaca----gggagagtgaaaatcatgagtgtcttgttcattggtgagattggtaaaatgtgtagaaattagggttgttctttgtgagcttgttgaagc 27417075  T
Q  234 taatttc 240  Q
    |||||||    
T  27417074 taatttc 27417068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 46703359 - 46703565
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||| ||||||||||||||||||||| ||| |||| |||| |||||    
T  46703359 ggtgagtcttgtgaaaccaaaagagaaaatccttag-gaaatcaaaggctaaaagttggttctcttttgggggttagattatagtgttgggaaacaattg 46703457  T
Q  134 taaacgccttgggagagtgaaaat-catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||| |||    
T  46703458 taaacaccttgggagagtgaaaattcatgagtgtcttgttcattggtgagattgggaaaatgagtagaaattagggttgttctttgtgagcttgtttaag 46703557  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  46703558 ctaatttc 46703565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 50263007 - 50262804
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||    
T  50263007 ggtgactcttgtgaaaccaaaagagaagacccttagtgaaatcaaaggctaatggttggttctcttttgggggttagattctagagttgggaaacaattg 50262908  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||  ||||||||||||||||||||||||||||||||| ||   ||||||||  ||||||| | ||||||| |||||||||||||||||||||||||||    
T  50262907 taaataccttgggagagtgaaaatcatgagtgtcttgtttat---tgagattgggaaaatggatcgaaattacggttgttctttgtgagcttgttgaagc 50262811  T
Q  234 taatttc 240  Q
    |||||||    
T  50262810 taatttc 50262804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 8647997 - 8648204
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | || | |||| ||||||||||||||||||||||| |||||  |||| || ||    
T  8647997 ggtgagtcttgtgaaatcaaaagagaagatccttagtgaaatcaaatgttatgtgttggttctcttttgggggttagattctggagttaggaaacaactg 8648096  T
Q  134 taaacgccttgggagagtgaaaa-tcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||||||||| ||  ||||||| |||||||||||||||||| ||||||| |||||||||    
T  8648097 taaacaccttggaagagtgaaaattcatgagtgtcttgttcattggtgagaatgggaaaatggatagaaattagggttgttcattgtgagtttgttgaag 8648196  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  8648197 ctaatttc 8648204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 12119398 - 12119604
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||| ||||||||||||||||||||||||||||||  |||||| |||  ||||||||| ||||||||||||||||||||| |||||||| |||| |||||    
T  12119398 ggtgtgtcttgtgaaaccaaaagagaagatccttaa-gaaatcgaagt-taagggttggttctcttttgggggttagattatagagttgggaaacaattg 12119495  T
Q  134 taaacgccttgggagagtgaaaatc-atgagtgtcttgttcattggtgagattgaaaaaatgggtagaaatta-gggttgttctttgtgagcttgttgaa 231  Q
    ||||  ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| | |||||||||| || ||||||||||||| ||| |||||    
T  12119496 taaataccttgggagagtgaaaatcaatgagtgtcttgttcataggtgagattggaaaaaagagtagaaattatggtttgttctttgtgaactttttgaa 12119595  T
Q  232 gctaatttc 240  Q
    |||||||||    
T  12119596 gctaatttc 12119604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 94 - 240
Target Start/End: Original strand, 41639345 - 41639491
Alignment:
Q  94 tctcttttgggggttagattctagagttgagaaataattgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaat 193  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||| |||||||||||| |||||| ||||||  |||||    
T  41639345 tctcttttgggggttagattctagagttgggaaacaattgtaaacaccttaggagagtgaaaatcacgagtgtcttgtttattggtaagattgggaaaat 41639444  T
Q  194 gggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  41639445 gggtagaaattagggttgttctttgtgaactttttgaagctaatttc 41639491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 113 - 239
Target Start/End: Original strand, 21688186 - 21688313
Alignment:
Q  113 tctagagttgagaaataattgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttg 211  Q
    |||||||||| |||| |||| ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  21688186 tctagagttgggaaacaattctaaacaccttgggggagtgaaaatcatgagtgtcttgttcatcggtgagattgagaaaaatgggtagaaattagggttg 21688285  T
Q  212 ttctttgtgagcttgttgaagctaattt 239  Q
    |||||||||||||||||||| |||||||    
T  21688286 ttctttgtgagcttgttgaaactaattt 21688313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 36994478 - 36994589
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  36994478 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattaaggttgttctttgtgagcttgtt 36994577  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  36994578 gaagctaatttc 36994589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 5871774 - 5871885
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  5871774 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaatgggtagaaattaggtttgttctttgtgagcttgtt 5871873  T
Q  229 gaagctaatttc 240  Q
     |||| ||||||    
T  5871874 taagcaaatttc 5871885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 26175850 - 26175739
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  26175850 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatggggagaaattagggttgttctttgtgagcttgtt 26175751  T
Q  229 gaagctaatttc 240  Q
    ||| ||||||||    
T  26175750 gaaactaatttc 26175739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 47038619 - 47038513
Alignment:
Q  134 taaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  47038619 taaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaa-tgggtagaaattagggttgttctttgtgagcttgttgaag 47038521  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  47038520 ctaatttc 47038513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 54200120 - 54200009
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  54200120 attgtaaacacattgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 54200021  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  54200020 gaagctaatttc 54200009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 48893856 - 48893741
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttc----tttgtgagct 224  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    ||||||||||    
T  48893856 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttcattgtttgtgagct 48893757  T
Q  225 tgttgaagctaatttc 240  Q
    ||||||||||||||||    
T  48893756 tgttgaagctaatttc 48893741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 5429633 - 5429744
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||||||| ||||| |||||||||||    
T  5429633 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgagtagaaattagggttattcttcgtgagcttgtt 5429732  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  5429733 gaagctaatttc 5429744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 52095576 - 52095465
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||     
T  52095576 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtc 52095477  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  52095476 aaagctaatttc 52095465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 24969067 - 24969177
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    |||||||| ||||||| ||||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  24969067 ttgtaaacaccttgggtgagtgaaaatcattgagagtcttgttctttggtgagattggaaaaatgggtagaaattagatttgttctttgtgagcttgttg 24969166  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  24969167 aagctaatttc 24969177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 26364124 - 26364222
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||| |||| ||||    
T  26364124 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaatgctaagggttggttctcttttggtggttagattttagagttgggaaacaatt 26364222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 34570617 - 34570517
Alignment:
Q  141 cttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaattt 239  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  34570617 cttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaataggtagaaattagggttgttctttgtgaacttgttgaagctaattt 34570518  T
Q  240 c 240  Q
    |    
T  34570517 c 34570517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 48142996 - 48143108
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||  ||||||||||||||||||||||||||| |||||    
T  48142996 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaaaggtagaaattagggttgttctttgtgaacttgt 48143095  T
Q  228 tgaagctaatttc 240  Q
    |||||||||||||    
T  48143096 tgaagctaatttc 48143108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 9927671 - 9927561
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  |||||||||||| |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  9927671 attgtaaacaccttggt-gagtgaaaatcactgagtgtcttattcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 9927573  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  9927572 gaagctaatttc 9927561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 36463603 - 36463492
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| |||||||| |||| ||||||||||||||||||||||||||  ||||||| |||||||||||| ||||| |||||||||||||    
T  36463603 attgtaaacaccttgggtgagtgaaattcattgagtgtcttgttcattggtgagattgggaaaatggatagaaattagggctgttcattgtgagcttgtt 36463504  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  36463503 gaagctaatttc 36463492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 41639217 - 41639328
Alignment:
Q  129 aattgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    |||||||||| |||| ||||||||||||||| |||||||||||| |||||| ||||||  ||||||||||||||||||||||||||||||| | ||| ||    
T  41639217 aattgtaaacaccttaggagagtgaaaatcacgagtgtcttgtttattggtaagattgggaaaatgggtagaaattagggttgttctttgtaaacttttt 41639316  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  41639317 gaagctaatttc 41639328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 52467567 - 52467460
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||| ||||| |||  ||||||||||||||||||| |||||||||||||||||||||    
T  52467567 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgaggttgggaaaatgggtagaaattaggtttgttctttgtgagcttgttg 52467468  T
Q  230 aagctaat 237  Q
    ||||||||    
T  52467467 aagctaat 52467460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 56178850 - 56178740
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| ||||||    
T  56178850 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtt 56178752  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  56178751 gaagctaatttc 56178740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 240
Target Start/End: Complemental strand, 26699741 - 26699546
Alignment:
Q  47 aaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaaacgccttggg 146  Q
    |||| |||||||| |||| ||| || ||||||||| ||| ||||| ||||||||| ||||||||||| || ||||| |||| |||||||||| | |||||    
T  26699741 aaactaaaagagatgatcttta-tgtaatcaaaggttaaaggttggttctcttttaggggttagattataaagttgggaaacaattgtaaacactttggg 26699643  T
Q  147 agagtgaaaatca-tgagtgtcttgttcattggtgagattga-aaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttc 240  Q
     |||||||||||| ||| ||||||||| ||| | |||||| | || || ||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  26699642 tgagtgaaaatcattgaatgtcttgtttattagagagattcagaagaaagggtatagattagggtttgttctttgtgagcttgttgaagctaatttc 26699546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 31474104 - 31474216
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagg-gttgttctttgtgagcttgt 227  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||| ||||    
T  31474104 attgtaaacactttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattaggtcttgttctttttgagtttgt 31474203  T
Q  228 tgaagctaatttc 240  Q
    |||||||||||||    
T  31474204 tgaagctaatttc 31474216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 26364223 - 26364301
Alignment:
Q  162 agtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26364223 agtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttc 26364301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 33989721 - 33989862
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||||||||||| ||  ||||||||||| |||||||||||||||||| |||| || ||    
T  33989721 ggtgagtcttttgaaaccaaaagagaagatccttag-gtaatcaaaggctaaggatttgttctcttttggaggttagattctagagttgggaaacaactg 33989819  T
Q  134 taaacgccttgggagagtgaaaatca-tgagtgtcttgttcat 175  Q
    ||||| ||||||  |||| ||||| | ||||||| ||||||||    
T  33989820 taaacaccttggttgagtaaaaattattgagtgttttgttcat 33989862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 46147570 - 46147494
Alignment:
Q  164 tgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46147570 tgtcttgttcatcggtgagattggaaaaatgggtagaaattagggttgttcattgtgagcttgttgaagctaatttc 46147494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 12739764 - 12739653
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||| || ||||| ||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||     
T  12739764 attgtaaacaccttaggtgagtggaaatcattgagtgtcttgttcattggtgagattgggaaaatggatagaaattagggttgttctttgtgaacttgtc 12739665  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  12739664 aaagctaatttc 12739653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 12747970 - 12747859
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||| || ||||| ||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||     
T  12747970 attgtaaacaccttaggtgagtggaaatcattgagtgtcttgttcattggtgagattgggaaaatggatagaaattagggttgttctttgtgaacttgtc 12747871  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  12747870 aaagctaatttc 12747859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 37740580 - 37740690
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  |||||||||||| ||||||||||||||||||||||||||   |||| ||||| |||||||||||||||||||||| ||||||    
T  37740580 attgtaaacaccttggt-gagtgaaaatcactgagtgtcttgttcattggtgagatttggaaaaagggtataaattagggttgttctttgtgaacttgtt 37740678  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  37740679 gaagctaatttc 37740690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 52082871 - 52082760
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| || |||||||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||     
T  52082871 attgtaaacaccttgggtgagtgaaaatcattgactgtcttgttcattggtgagattgggaaaatgggtagaaactagggttgttctttgtgaacttgtc 52082772  T
Q  229 gaagctaatttc 240  Q
     || ||||||||    
T  52082771 aaaactaatttc 52082760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 37229935 - 37229826
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggt-tgttctttgtgagcttgtt 228  Q
    |||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||||||||||||    
T  37229935 ttgtaaacaccttgggtgagtgaaaatcaatgagtgtcttgttcattggtgagattgggaaaat-ggtagaaattagggtgtgttctttgtgagcttgtt 37229837  T
Q  229 gaagctaattt 239  Q
     |||| |||||    
T  37229836 aaagcaaattt 37229826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 3913412 - 3913513
Alignment:
Q  140 ccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatt 238  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||||||  |||||| ||||||||||| | ||||||||||||| |||||||||||||||    
T  3913412 ccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgagtagaaattagagctgttctttgtgagtttgttgaagctaatt 3913511  T
Q  239 tc 240  Q
    ||    
T  3913512 tc 3913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 12745648 - 12745539
Alignment:
Q  132 tgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttga 230  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||||| |||||  |    
T  12745648 tgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggcgagattaggaaaatgggtagaaattagggttgttctttgtgaacttgtcaa 12745549  T
Q  231 agctaatttc 240  Q
    | ||||||||    
T  12745548 aactaatttc 12745539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 13009645 - 13009549
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagctt 225  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| |||||||| ||||||||    
T  13009645 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgtgaaaatgggtagaaattaggtttgttcttcgtgagctt 13009549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 29254448 - 29254559
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| | ||||| || |||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||| |||||| ||| ||||||||||    
T  29254448 attgtaaacacattgggtgaatgaaaatcattgagtgtcttgttcattggtgagattgggaaattgggtagaaattagagttgttttttatgagcttgtt 29254547  T
Q  229 gaagctaatttc 240  Q
    |||| |||||||    
T  29254548 gaagttaatttc 29254559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 6542395 - 6542282
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattg--aaaaaatgggtagaaattagggtt-gttctttgtgagctt 225  Q
    ||||||||| ||||||| |||||||||| || |||||||||||||||||| |||||||  ||||||||| ||||||||||| || |||||||||||||||    
T  6542395 attgtaaacaccttgggtgagtgaaaattattgagtgtcttgttcattggggagattgggaaaaaatgg-tagaaattaggatttgttctttgtgagctt 6542297  T
Q  226 gttgaagctaatttc 240  Q
    |||||| ||||||||    
T  6542296 gttgaaactaatttc 6542282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 240
Target Start/End: Complemental strand, 22883047 - 22882854
Alignment:
Q  49 accaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttggggg-ttagattctagagttgagaaataatt-gtaaacgccttggg 146  Q
    |||||||||||||||||||||  |||||||||| ||| ||||| |||||||||||||| |||||||||||| |||  ||| |||| |  ||||| ||| |    
T  22883047 accaaaagagaagatccttaga-aaatcaaaggataatggttggttctcttttggggggttagattctagaattggaaaacaattaggtaacgctttgag 22882949  T
Q  147 agagtgaaaatcat-gagtgtcttgttcattggt-gagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    | |||||||||||| ||||| ||||||||| |   |||||||||||| ||| || |||||||| |||||||| | ||| |||||||||||||||||    
T  22882948 aaagtgaaaatcattgagtgccttgttcatggaaagagattgaaaaa-tggataaaaattaggtttgttcttggagagtttgttgaagctaatttc 22882854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 240
Target Start/End: Complemental strand, 22934711 - 22934518
Alignment:
Q  49 accaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttggggg-ttagattctagagttgagaaataatt-gtaaacgccttggg 146  Q
    |||||||||||||||||||||  |||||||||| ||| ||||| |||||||||||||| |||||||||||| |||  ||| |||| |  ||||| ||| |    
T  22934711 accaaaagagaagatccttaga-aaatcaaaggataatggttggttctcttttggggggttagattctagaattggaaaacaattaggtaacgctttgag 22934613  T
Q  147 agagtgaaaatcat-gagtgtcttgttcattggt-gagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    | |||||||||||| ||||| ||||||||| |   |||||||||||| ||| || |||||||| |||||||| | ||| |||||||||||||||||    
T  22934612 aaagtgaaaatcattgagtgccttgttcatggaaagagattgaaaaa-tggataaaaattaggtttgttcttggagagtttgttgaagctaatttc 22934518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 41961270 - 41961368
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||| || ||||||| |||| |||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||| |||| |||||    
T  41961270 ggtgagtcttgggagaccaaaaaagaatatccttag-gaaatcaaaagctaagggttggttctcttttgagggttagattctagagttgggaaacaattg 41961368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 51337018 - 51337116
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattaggg--ttgttctttgtgagctt 225  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||| ||  |||||||||||||||||    
T  51337018 attgtaaacaccttgggtgagtgaaaatcattgagtgtcctgttcattggtgagattgagaaaaagggtagaaattacggatttgttctttgtgagctt 51337116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 5208055 - 5207946
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcatg-agtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgtt 228  Q
    |||||||| ||||||| |||||||||||||  |||| |||||||||||| | ||||| ||||| ||||||||||||||||| ||||||||||| ||||||    
T  5208055 ttgtaaacaccttgggtgagtgaaaatcatttagtgacttgttcattggagtgattggaaaaa-gggtagaaattagggtttgttctttgtgaacttgtt 5207957  T
Q  229 gaagctaattt 239  Q
    |||||||||||    
T  5207956 gaagctaattt 5207946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 239
Target Start/End: Original strand, 33089762 - 33089942
Alignment:
Q  49 accaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaaacgccttgggag 148  Q
    |||||||||||||||||||||  |||||||||||||| ||||| ||||||||||| ||||||||| ||||||||          | |||| |||||| ||    
T  33089762 accaaaagagaagatccttaga-aaatcaaaggctaaaggttggttctcttttggaggttagattatagagttg----------ggaaacaccttggaag 33089850  T
Q  149 agtgaaaatca-tgagtgtcttgttcattgg-tgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaattt 239  Q
    ||||||||||| |||||||||||||||| ||  ||||||| | | |||  ||||||||| | |||||||| | ||||||||||||||||||||    
T  33089851 agtgaaaatcattgagtgtcttgttcatgggaagagattg-agagatgaatagaaattatgtttgttcttggagagcttgttgaagctaattt 33089942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 4587912 - 4588024
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgt 227  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| ||||  ||||  ||||||||||| | || ||||||||| |||||||    
T  4587912 attgtaaacaccttgggtgagtgaaaatcattgagtgtcatgttcattggtgaaattgggaaaaaaggtagaaattaagatttgttctttgtaagcttgt 4588011  T
Q  228 tgaagctaatttc 240  Q
    |||||||||||||    
T  4588012 tgaagctaatttc 4588024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 30000019 - 29999910
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||| | ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| | |||     
T  30000019 attgtaaacaccttggt-gagtgaaaatcgttgagtgtcttgttcattggtgagattgggaaaa-gggtagaaattagggttgttctttgtgaacatgtc 29999922  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  29999921 aaagctaatttc 29999910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 5370283 - 5370200
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattg---aaaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||||||| ||||||||||||||||||||||||||   ||||||  ||||||||||||||||||||||||||| |||||    
T  5370283 gagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaaaaagaggtagaaattagggttgttctttgtgaacttgt 5370200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 3785952 - 3786034
Alignment:
Q  37 gagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagtt 121  Q
    |||||||| || |||||||||||| |||||||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  3785952 gagtcttgggagaccaaaagagaatatccttag-gaaatcaaaggctaagagttggttctcttttggggg-tagattctagagtt 3786034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 45687397 - 45687285
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagg-gttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||| |||||||| |  | || |||||||||||||||||||||||  |||||||| ||||||||||  |||||||||||||||||||    
T  45687397 attgtaaacaccttgggtgagtgaaattttttgattgtcttgttcattggtgagattgggaaaatgggaagaaattaggttttgttctttgtgagcttgt 45687298  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  45687297 caaagctaatttc 45687285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 240
Target Start/End: Complemental strand, 35369711 - 35369544
Alignment:
Q  73 aatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt-gtaaacgccttgggagagtgaaaatca-tgagtgtcttg 170  Q
    ||||||||||||||||||| ||||||||| |||||| |||| |||| ||| |||| |||| | |||| |||| | ||||||||||||| |||||||||||    
T  35369711 aatcaaaggctaagggttggttctctttt-ggggttggattatagaattgggaaacaattgggaaacacctt-gtagagtgaaaatcattgagtgtcttg 35369614  T
Q  171 ttcattg-gtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||   || ||||   ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||    
T  35369613 ttcattgcaagacattg-ggaaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttc 35369544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 53345189 - 53345282
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttg-ttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| |||||||||||| || || |||||||| ||||||  ||||||||| ||||| |||||||||||||||||||| ||||||||    
T  53345189 gagtgaaaatcattgagtgtcttgtttatcggagagattgagaaaatga-tagaaattaaggttgattctttgtgagcttgttgaaactaatttc 53345282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 5349922 - 5349973
Alignment:
Q  187 aaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatt 238  Q
    ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  5349922 aaaaaatgggtagaaattaggtttgttctttgtgaacttgtcgaagctaatt 5349973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 48142574 - 48142481
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| ||||||||||  ||||| ||||||||  || |||  |||||||||||||| ||||||||||||||||||||||||| ||||    
T  48142574 gagtgaaaatcattgagtgtcttgcccattgatgagattgggaacatga-tagaaattagggtttgttctttgtgagcttgttgaagctagtttc 48142481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 12744079 - 12744028
Alignment:
Q  189 aaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  12744079 aaaataggtagaaattagggttgttctttgtgaacttgtcaaagctaatttc 12744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 12745468 - 12745417
Alignment:
Q  189 aaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||| ||||||||||||||||||||||||||| |||||  |||||||||||    
T  12745468 aaaataggtagaaattagggttgttctttgtgaacttgtcaaagctaatttc 12745417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 40630843 - 40630878
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttag 69  Q
    ||||||||||||||||||||||||||||||||||||    
T  40630843 ggtgagtcttgtgaaaccaaaagagaagatccttag 40630878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 13992461 - 13992395
Alignment:
Q  175 ttggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||||| |||||  || ||||||||    
T  13992461 ttggtgagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgtcaaatctaatttc 13992395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 12744195 - 12744150
Alignment:
Q  195 ggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||||||||||||||||| |||||  |||||||||||    
T  12744195 ggtagaaattagggttgttctttgtgaacttgtcaaagctaatttc 12744150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 35370501 - 35370451
Alignment:
Q  190 aaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||| |||||||||||| |||||||| ||||||||| |||| ||||||||    
T  35370501 aaatgagtagaaattaggtttgttcttggtgagcttgatgaaactaatttc 35370451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 7187 - 7392
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||| |||||    
T  7187 ggtgagtcttgtgaaaccaaaagagaagatccttagtaaaatcaaaggctaagggttggttctcttttgggggttagattctagagctg-gaaacaattg 7285  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  7286 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattggaaaaatgggtagaaattaaggttgttctttgtgagcttgttgaagc 7385  T
Q  234 taatttc 240  Q
    |||||||    
T  7386 taatttc 7392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 4e-90; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 17762848 - 17763055
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  17762848 ggtgagtcttgtgaaacaaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 17762947  T
Q  134 taaacgccttgggagagtgaaaa-tcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| | ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17762948 taaacactttgagagagtgaaaattcatgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 17763047  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  17763048 ctaatttc 17763055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 21593525 - 21593729
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  21593525 ggtgagtcttgtgaaaccaaaagagaagatccttag-gaaatcaaag-ctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 21593622  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  21593623 taaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 21593722  T
Q  234 taatttc 240  Q
    |||||||    
T  21593723 taatttc 21593729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 37 - 240
Target Start/End: Complemental strand, 26830430 - 26830226
Alignment:
Q  37 gagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaa 136  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||    
T  26830430 gagtcttgtgaaaccaaaagagaagattcttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttggaaaacaattgtaa 26830331  T
Q  137 acgccttgggagagtgaaaatcatgagtgtcttgttcatt-ggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagcta 235  Q
    || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26830330 acaccttgggagagtgaaaatcatgagtgtcttgttcattgggtgagattggaaaaatgggtagaaattagagttgttctttgtgagcttgttgaagcta 26830231  T
Q  236 atttc 240  Q
    |||||    
T  26830230 atttc 26830226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 2973248 - 2973042
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||| |||| |||||    
T  2973248 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttagggattagattctagagttgggaaacaattg 2973149  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  2973148 taaacaccttgggagagtgaaaatcataagtgtcgtgttcattggtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaagc 2973049  T
Q  234 taatttc 240  Q
    |||||||    
T  2973048 taatttc 2973042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 5043486 - 5043692
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||    
T  5043486 ggtgagtcttgtgaaaccaaaagagaagatccttagtggaatcaaaggctaagagttggttctcttttgggggttagattctagagttgggaaacaattg 5043585  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||||||||    
T  5043586 taaacaccttgtgagagtgaaaatcatgagtgtcttgttcattcgtgagattgagaaaatgagtagaaattaggtttgttctttgtgagcttgttgaagc 5043685  T
Q  234 taatttc 240  Q
    |||||||    
T  5043686 taatttc 5043692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 3809017 - 3808812
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| |||||    
T  3809017 ggtgagtcttgtaaaaccaaaagagaaaatccttagtgaaatcaaaggctaagggttggttct-ttttgggggttagattctagagttgggaaacaattg 3808919  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||| |    
T  3808918 taaacaccttgggagagtgaaaatcacaagtgtcttgttcattggtgagattgggaaaataggtagaaattagggttgttctttgtgagcttgttgaaac 3808819  T
Q  234 taatttc 240  Q
    |||||||    
T  3808818 taatttc 3808812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 603389 - 603191
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||    
T  603389 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatggttggttctcttttgggggttagattctagagttgggaaacaattg 603290  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||        |||||||||||| | ||||||||||||||||||||||||||    
T  603289 taaacaccttgggatagtgaaaatcatgagtgtcttgttcattggtgagat--------tgggtagaaatttgtgttgttctttgtgagcttgttgaagc 603198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 38 - 240
Target Start/End: Complemental strand, 22425130 - 22424930
Alignment:
Q  38 agtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaaa 137  Q
    ||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||| ||||||| |||||||| |||| |||||||||    
T  22425130 agtcttgtgaaaccaaaagagaatatccttag-gaaatcaaag-ctaagggttggttctcttttgggg-ttagattatagagttgggaaacaattgtaaa 22425034  T
Q  138 cgccttgggagagtgaaaat-catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaa 236  Q
    | | |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22425033 cactttgggagagtgaaaattcatgagtgtcttgttcgttggtgagattggaaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaa 22424934  T
Q  237 tttc 240  Q
    ||||    
T  22424933 tttc 22424930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 9183245 - 9183134
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||    
T  9183245 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttgtgaatttgtt 9183146  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  9183145 gaagctaatttc 9183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 28137622 - 28137511
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  28137622 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagaatgggaaaatgggtagaaattagggttgttctttgtgagcttgtt 28137523  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  28137522 taagctaatttc 28137511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 21588913 - 21588996
Alignment:
Q  157 tcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21588913 tcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 21588996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 147 - 240
Target Start/End: Original strand, 17757994 - 17758088
Alignment:
Q  147 agagtgaaaat-catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||| |||||||||||| |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17757994 agagtgaaaattcatgagtgtcttcttcatttgtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 17758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 3039117 - 3039006
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||| | ||||||||||||| || |||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||||| ||    
T  3039117 attgtaaacaccttgagtgagtgaaaatcattgaatgtcttgttcattggtgagattgggaaaattggtagaaattagggttgttcattgtgagcttttt 3039018  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  3039017 gaagctaatttc 3039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 25073463 - 25073628
Alignment:
Q  71 gaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt-gtaaacgccttgggagagtgaaaatca-tgagtgtct 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| | ||||  |||||| ||||| |||||| ||||| |||    
T  25073463 gaaattaaaggctaagggttgattctcttttgggggttagattctagagttgggaaacaattgggaaacatcttgggtgagtg-aaatcattgagtatct 25073561  T
Q  169 tgttcattgg-tgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagcta 235  Q
    ||||||| ||  |||||||||||||| ||||||||||||  || ||||| ||||||||||| ||||||    
T  25073562 tgttcatgggaggagattgaaaaaat-ggtagaaattagatttattcttcgtgagcttgttaaagcta 25073628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 16452543 - 16452432
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||    
T  16452543 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgt 16452445  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  16452444 caaagctaatttc 16452432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 2171744 - 2171634
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||| |||||     
T  2171744 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaatggtagaaattagggttgttctttgtgaacttgtc 2171646  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  2171645 aaagctaatttc 2171634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 5406412 - 5406303
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||     
T  5406412 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgg-tagaaattagggttgttctttgtgaacttgtc 5406315  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  5406314 aaagctaatttc 5406303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 5410737 - 5410628
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||     
T  5410737 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgg-tagaaattagggttgttctttgtgaacttgtc 5410640  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  5410639 aaagctaatttc 5410628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 26954499 - 26954389
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||| || ||||||||||||| |||||||||||||||  |||||||||  ||| ||| || |||||||||||||||||||||||||||||    
T  26954499 attgtaaacacctttggggagtgaaaatcattgagtgtcttgttcatatgtgagattgggaaattgg-tataaattagggttgttctttgtgagcttgtt 26954401  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  26954400 gaagctaatttc 26954389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 33211399 - 33211288
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||||||  | |||||||||| |||||| |||||||||||||||||||  ||||| ||||||||||| |||||||||||||||||||| |    
T  33211399 attgtaaacaccttgggtcactgaaaatcattgagtgttttgttcattggtgagattgggaaaattggtagaaattatggttgttctttgtgagcttgat 33211300  T
Q  229 gaagctaatttc 240  Q
    |||| |||||||    
T  33211299 gaagttaatttc 33211288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 30834733 - 30834639
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||  |||||||||||    
T  30834733 gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttc 30834639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 240
Target Start/End: Original strand, 4045364 - 4045488
Alignment:
Q  117 gagttgagaaataattgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttc 214  Q
    |||||| |||| | |||||||| ||| ||| ||||||||||||| |||||||||||| ||||| |||||||  ||||||| |||||||||||||| ||||    
T  4045364 gagttgggaaacatttgtaaacacctagggtgagtgaaaatcattgagtgtcttgtttattggagagattgggaaaatgg-tagaaattagggtttgttc 4045462  T
Q  215 tttgtgagcttgttgaagctaatttc 240  Q
    ||| ||||||||||||||||||||||    
T  4045463 tttatgagcttgttgaagctaatttc 4045488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 31404887 - 31404778
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| |||||||||||||||  |||||||||  ||||||| ||||||||||||||||||||||||| |||||     
T  31404887 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcatcagtgagattgggaaaatgg-tagaaattagggttgttctttgtgaacttgtc 31404790  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  31404789 aaagctaatttc 31404778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 5413589 - 5413497
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||| || |||||||||||||||||||||| || |||||  |||||||||||    
T  5413589 gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaagg-tagaaattagggttgttctttgcgaacttgtcaaagctaatttc 5413497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 16569037 - 16569099
Alignment:
Q  179 tgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  16569037 tgagattgagaaaatgggtagaaattaggttttgttctttgtgagcttgtttaagctaatttc 16569099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 33160536 - 33160455
Alignment:
Q  160 tgagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||| ||||||||||||||||  |||||  |||||||||||| |||||||||||||| |||||  |||||||||||    
T  33160536 tgagtgtcttattcattggtgagattgggaaaaaaaggtagaaattagagttgttctttgtgaacttgtcaaagctaatttc 33160455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 5741099 - 5741012
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttg 122  Q
    ||||| ||||| ||||| ||||| ||||||||||||| |||||||||||||||||||| ||   ||| ||||||||||||||| |||||    
T  5741099 ggtgaatcttgagaaacaaaaagtgaagatccttagt-aaatcaaaggctaagggttggttacttttggggggttagattctaaagttg 5741012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 17757943 - 17757995
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaag 86  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||||||    
T  17757943 ggtgagtcttgtgaaacaaaaagagaagatcatcagtgaaatcaaaggctaag 17757995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 6097608 - 6097544
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| |||||||| ||||||||||| ||||||||||||| |||||  || ||||||||    
T  6097608 ttggtgagattggaaaaatgg-tagaaattaggattgttctttgtgaacttgtcaaatctaatttc 6097544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 16567200 - 16567262
Alignment:
Q  179 tgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||  ||||||| ||||||||||| || ||| |||||||||||||| |||||||||||    
T  16567200 tgagattgggaaaatggttagaaattaggttttgttttttgtgagcttgtttaagctaatttc 16567262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 3072928 - 3072864
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||  ||||||| |||||||||||||||||| |||||| |||||  || ||||||||    
T  3072928 ttggtgagattgggaaaatgg-tagaaattagggttgttcattgtgaacttgtcaaatctaatttc 3072864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 36 - 240
Target Start/End: Complemental strand, 49199777 - 49199573
Alignment:
Q  36 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgta 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  49199777 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaatggttggttctcttttgggggttagattctagagttgggaaacaattgta 49199678  T
Q  136 aacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagcta 235  Q
    ||| | |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||    
T  49199677 aacactttgggagagtgaaaatcatgagtgtcttgttcgttggtgagattgggaaaatgggtagaaattaaggttgttctttgtgagcttgttgaagcta 49199578  T
Q  236 atttc 240  Q
    |||||    
T  49199577 atttc 49199573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 35 - 239
Target Start/End: Original strand, 54593565 - 54593768
Alignment:
Q  35 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgt 134  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  54593565 gtgagtcttgtgaaaccaaaatagaagatccttagtgaaatcaaaggctaagggttg-ttctcttttgggggttagattctagagttgggaaacaattgt 54593663  T
Q  135 aaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagct 234  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||    
T  54593664 aaacaccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgtgcagaaattagggttgttctttgtgagcttgttgaagct 54593763  T
Q  235 aattt 239  Q
    |||||    
T  54593764 aattt 54593768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 30235984 - 30236190
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| |||||||||||||||||||||||||||||| |||| |||||    
T  30235984 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcgaaggctaatgattggttctcttttgggggttagattctagagttgggaaacaattg 30236083  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  30236084 taaacaccttgggatagtgaaaatcatgagtgtcttgttcattgatgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 30236183  T
Q  234 taatttc 240  Q
    |||||||    
T  30236184 taatttc 30236190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 34491072 - 34491277
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  34491072 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttggttctcttttgggggttagattctagagttgggaaacaattg 34491171  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||| || ||||||| || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  34491172 taaacaccttgggagagtgaaattc-tgagtgtgttattcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 34491270  T
Q  234 taatttc 240  Q
    |||||||    
T  34491271 taatttc 34491277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 46860330 - 46860539
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaag--ggttgattctcttttgggggttagattctagagttgagaaataat 131  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||  ||||| ||||||||||||||||||||||||||||||||||| |||    
T  46860330 ggtgagtcttgtgaaaccaaaagagaagatccttag-gaaatcaaagactaagagggttggttctcttttgggggttagattctagagttgagaaacaat 46860428  T
Q  132 tgtaaacgccttgggagagtgaaaatc--atgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    ||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  46860429 tgtaaacaccttgggagagtgaaaattcaatgagtgtcttgttcattggtgagattgagaaaatgggtagaaattaggtttgttctttgtgagcttgttg 46860528  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  46860529 aagctaatttc 46860539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 6095908 - 6095702
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||| |||||    
T  6095908 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaatgctaaaggttggttctcttttgggggttagattctagagttgggaaacaattg 6095809  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||| | ||| ||||||     
T  6095808 taaacaccttgggagagtgaaaatcatgagtgtcttattcattggtgagattgggaaaatgagtagaaattagggttgttctttgtaaacttcttgaagt 6095709  T
Q  234 taatttc 240  Q
    |||||||    
T  6095708 taatttc 6095702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 237
Target Start/End: Original strand, 47304110 - 47304313
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||  ||| ||||     
T  47304110 ggtgagtcttgtaaaaccaaaagagaatatccttagtgaaatcaaaaactaagggttggttctcttttgggggttagattctagagttggaaaacaattt 47304209  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| || |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||     
T  47304210 taaacaccctgggagagtgaaaatcatgagtgtcttgttcatttgtgagattgagaaaatgggtagaaattatggttgttctttgtgagcttgttgaagt 47304309  T
Q  234 taat 237  Q
    ||||    
T  47304310 taat 47304313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 4569810 - 4570017
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||| |||||    
T  4569810 ggtgagtcttgtgaaaccaaaagagatgatctttagtgaaatcaaaggctaagggttggttctcttttggtggttagattctagagttggaaaacaattg 4569909  T
Q  134 taaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| ||||||| |||||||||||| ||||||| |||||| ||||||||||||  |||||||||||||||||||||||||| |||||||||| ||||||    
T  4569910 taaacaccttgggtgagtgaaaatcattgagtgttttgttctttggtgagattgggaaaatgggtagaaattagggttgttcattgtgagcttattgaag 4570009  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  4570010 ctaatttc 4570017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 36018710 - 36018917
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| |||||||||||||||| |||| |||||    
T  36018710 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatggattggttctcttttggggtttagattctagagttgggaaacaattg 36018809  T
Q  134 taaacgccttgggagagtgaaaa-tcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| ||||||||||||||||| | | ||||| ||||||||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  36018810 taaacaccttgggagagtgaaaattaacgagtgacttgttcattggtgaaattgggaaaatgggttgaaattagggttgttctttgtgagcttgttgaag 36018909  T
Q  233 ctaatttc 240  Q
     |||||||    
T  36018910 ttaatttc 36018917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 41819830 - 41819626
Alignment:
Q  35 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgt 134  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||| ||||||||| | |||||||||||||||||| |||||||||||    
T  41819830 gtgagtcttatgaaaccaaaagagaagatcttta-tgaaatcaaag-ctaagggttggttctcttttagcggttagattctagagttgggaaataattgt 41819733  T
Q  135 aaacgccttgggagagtgaaaat-catgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||  ||||    
T  41819732 aaacaccttgggagagtgaaaattcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttttttgtgagcttgtctaagc 41819633  T
Q  234 taatttc 240  Q
    |||||||    
T  41819632 taatttc 41819626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 38 - 240
Target Start/End: Complemental strand, 43402095 - 43401905
Alignment:
Q  38 agtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgtaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||            ||||||||| ||||  ||||||||    
T  43402095 agtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctatgggttggttctctttt------------ctagagttgggaaacgattgtaaa 43402008  T
Q  138 cgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaat 237  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43402007 caccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaat 43401908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 43404042 - 43403848
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||            ||| ||||| |||| |||||    
T  43404042 ggtgagtcttgtgaaactaaaagagaagatccttagtgaaatcaaaggctatgggttggttctctttt------------ctaaagttgggaaacaattg 43403955  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  43403954 taaacactttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgggaaaatgggtagaaattaggcttgttctttgtgagcttgttgaagc 43403855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 5434186 - 5433979
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||| |||| | ||||||||||||||||||||||||| |||||||| |||| |||||    
T  5434186 ggtgagtcttgggaaaccaaaagagaagatcctta-tgtaatcaaagactaaagattgattctcttttgggggttagattatagagttgggaaacaattg 5434088  T
Q  134 taaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagatt--gaaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttg 229  Q
    ||||| |||| || |||||||||||| ||||||||||||||||||||||||||  || ||||| |||||||||||||| ||||||||||||||||||||     
T  5434087 taaacacctt-ggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggagaaaat-ggtagaaattagggtttgttctttgtgagcttgtta 5433990  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  5433989 aagctaatttc 5433979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 55302273 - 55302084
Alignment:
Q  35 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgt 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||  ||||||||| |||||||| |||| ||||||    
T  55302273 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaggggttggttctcttttgtaggttagattatagagttgggaaacaattgt 55302174  T
Q  135 aaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagct 234  Q
    |||  ||||||||||||||||||||||||||||||||||||                |||||||||||||||||||||||||||| || |||||||||||    
T  55302173 aaataccttgggagagtgaaaatcatgagtgtcttgttcat----------------atgggtagaaattagggttgttctttgtaagtttgttgaagct 55302090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 31340447 - 31340304
Alignment:
Q  97 cttttgggggttagattctagagttgagaaataattgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatggg 196  Q
    ||||| |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||    
T  31340447 cttttaggggttagattctagagttgggaaacaattgtaaacaccttgggagagtgaaaatcatgagtgttttgttcattggtgagattgggaaaattgg 31340348  T
Q  197 tagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||  ||||||||||||||||||||||||||||||||||    
T  31340347 tagaaattgaggttgttctttgtgagcttgttgaagctaatttc 31340304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 34 - 182
Target Start/End: Original strand, 40913198 - 40913350
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  40913198 ggtgagtcttgtgaaagcaaaagagaagatccttagtgaaattaaaggttaagggttggttctcttttgggggttagattctagagttgggaaacaattg 40913297  T
Q  134 taaacgccttgggaga----gtgaaaatcatgagtgtcttgttcattggtgag 182  Q
    ||||| ||||||||||    |||||||| ||||||||||||||||||||||||    
T  40913298 taaacaccttgggagagtacgtgaaaattatgagtgtcttgttcattggtgag 40913350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 40735337 - 40735447
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||||| | |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40735337 attgtaaacaccttggaaaagtgaaaatcattgagtgtcttgttcattggtgagattgagaaaatgggtagaaattagggttgttctttgtgagcttgtt 40735436  T
Q  229 gaagctaattt 239  Q
    |||||||||||    
T  40735437 gaagctaattt 40735447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 5236670 - 5236559
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  5236670 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtt 5236571  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  5236570 gaagctaatttc 5236559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 40734452 - 40734563
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  40734452 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgtt 40734551  T
Q  229 gaagctaatttc 240  Q
    ||| ||||||||    
T  40734552 gaacctaatttc 40734563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 44700691 - 44700581
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttg 229  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  44700691 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggttgttctttgtgagtttgttg 44700592  T
Q  230 aagctaatttc 240  Q
    |||||||||||    
T  44700591 aagctaatttc 44700581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 44331499 - 44331610
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||||||||    
T  44331499 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattaggaaaatgggtagaaattagggttgttcattgtgagcttgtt 44331598  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  44331599 gaagctaatttc 44331610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 31314399 - 31314510
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| ||||||    
T  31314399 attgtaaacactttgggtgagtgaaaatcattgagtgtcttgttcataggtgagattgagaaaatgggtagaaattagggttgttcattgtgatcttgtt 31314498  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  31314499 gaagctaatttc 31314510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 51398768 - 51398879
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  51398768 attgtaaacaccttggatgagtgaaaatcattgagtgtcttgttcattgatgagattggaaaaatgggtagaaattagggttgttcttagtgaacttgtt 51398867  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  51398868 gaagctaatttc 51398879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 53921717 - 53921606
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  53921717 attgtaaaaaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattggaaaaatgggtagaaattaggtttgttgtttgtgagcttgtt 53921618  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  53921617 aaagctaatttc 53921606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 240
Target Start/End: Complemental strand, 9666693 - 9666569
Alignment:
Q  118 agttgagaaataattgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattag-ggttgttct 215  Q
    ||||| |||| | |||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||   |||||||    
T  9666693 agttgggaaacatttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattggaaaaatgggtagaaattagattttgttct 9666594  T
Q  216 ttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||||||||||||||||    
T  9666593 ttgtgagcttgttgaagctaatttc 9666569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 46173315 - 46173422
Alignment:
Q  124 gaaataattgtaaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagc 223  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||         ||||| |||||||||||||||||||||||||||||    
T  46173315 gaaacaattgtaaacaccttgggagagtgaaaatcatgagtgtcttgttcattggt---------aaaattggtagaaattagggttgttctttgtgagc 46173405  T
Q  224 ttgttgaagctaatttc 240  Q
    |||||||||||||||||    
T  46173406 ttgttgaagctaatttc 46173422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 22835216 - 22835105
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||| | ||||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  22835216 attgtaatcaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtt 22835117  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  22835116 taagctaatttc 22835105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 29196600 - 29196489
Alignment:
Q  131 ttgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattaggg-ttgttctttgtgagcttgtt 228  Q
    |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||     
T  29196600 ttgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgggtagaaattagggtttgttctttgtgagcttgtc 29196501  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  29196500 aaagctaatttc 29196489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 7762237 - 7762330
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  7762237 gagtgaaaatcattgagtgtcttattcattggtgagattgagaaaaagggtagaaattagggttgttctttgtgaacttgttgaagctaatttc 7762330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 26323384 - 26323177
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt- 132  Q
    ||||||||||| || ||||||| |||| |||||||| ||||||||| ||||||||||| |||||||||| |||||||||| |||||||| |||| ||||     
T  26323384 ggtgagtcttgggagaccaaaaaagaatatccttag-gaaatcaaaagctaagggttggttctcttttgagggttagattttagagttgggaaacaattg 26323286  T
Q  133 gtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattgg-tgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttga 230  Q
    | |||| ||||| | ||||||| |||| | |||||||||||||| || ||||||||| |||| ||||| |||||||| ||||| ||   ||| |||||||    
T  26323285 ggaaacaccttgagtgagtgaacatcattaagtgtcttgttcatgggatgagattgagaaaa-gggtaaaaattaggtttgtttttgaagagtttgttga 26323187  T
Q  231 agctaatttc 240  Q
    ||||||||||    
T  26323186 agctaatttc 26323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 19684103 - 19683992
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| || ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||| |||||     
T  19684103 attgtaaacaccttgggtgagtgaaaatcattgaatgtcttgttcatttgtgagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtc 19684004  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  19684003 aaagctaatttc 19683992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 29682313 - 29682424
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||||||||||| ||| |||||||||  ||||||||||||||||| | ||||||||||||||||||||    
T  29682313 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgtttatttgtgagattgggaaaatgggtagaaattatgtttgttctttgtgagcttgtt 29682412  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  29682413 taagctaatttc 29682424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 29813017 - 29813128
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| | ||||| ||||||||||||| ||| | |||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  29813017 attgtaaacacattgggtgagtgaaaatcattgaggggcttgttaattggtgagattggaaaaataggtagaaattagggttgttctttgtgaacttgtt 29813116  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  29813117 gaagctaatttc 29813128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 32891057 - 32891169
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaatt-agggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||| |||| |||||||| ||||||||||||| | ||||||||||| |||||||||||||||| ||  |||||||||||||||||||    
T  32891057 attgtaaacaccttgggtgagtaaaaatcattgagtgtcttgttcttcggtgagattgagaaaatgggtagaaattaagttttgttctttgtgagcttgt 32891156  T
Q  228 tgaagctaatttc 240  Q
    |||||||||||||    
T  32891157 tgaagctaatttc 32891169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 240
Target Start/End: Complemental strand, 35139013 - 35138809
Alignment:
Q  36 tgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaag-gctaagggttgattctcttttgggggttagattctagagttgagaaataattgt 134  Q
    ||||||||| || ||||||| ||||||||||||| ||||| |||  |||||||||| |||||||||||||| ||| ||| || ||||| |||| ||||||    
T  35139013 tgagtcttgggagaccaaaatagaagatccttag-gaaataaaaaagctaagggttaattctcttttgggg-ttaaattttaaagttg-gaaacaattgt 35138917  T
Q  135 -aaacgccttgggagagtgaaaatca-tgagtgtcttgttcattg-gtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaa 231  Q
     |||| |||||||||||||||||||| |||||||||||||||| |   ||||||| | |||||||||||||||| | |||||||| ||||| ||||||||    
T  35138916 gaaacaccttgggagagtgaaaatcattgagtgtcttgttcatggaaagagattg-agaaatgggtagaaattatgtttgttcttggtgagtttgttgaa 35138818  T
Q  232 gctaatttc 240  Q
    | |||||||    
T  35138817 gttaatttc 35138809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 760805 - 760912
Alignment:
Q  134 taaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| ||||||  ||||||||||||| |||||||||||||||| |||||||||  |||||||||||||||||||  ||||||||||||||||||| |||    
T  760805 taaacaccttggatgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgggtagaaattaggtctgttctttgtgagcttgtttaag 760904  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  760905 ctaatttc 760912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 39153575 - 39153464
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| || |||||||||| |||||||||||||||  |||||||||  ||||||||||||||||||| |||||| |||||||||||||    
T  39153575 attgtaaacaccttgggtgaatgaaaatcattgagtgtcttgttcatgtgtgagattgggaaaatgggtagaaattaggtttgttcattgtgagcttgtt 39153476  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  39153475 taagctaatttc 39153464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 5258358 - 5258247
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||    
T  5258358 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgt 5258260  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  5258259 caaagctaatttc 5258247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 9581237 - 9581347
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||||| ||| ||||    |||||||||||||||||| ||||||||||||||||||||    
T  9581237 attgtaaacaccttgggtgagtgaaaatcattgagtgtcttgttcatttgtgggatt-cggaaatgggtagaaattaggtttgttctttgtgagcttgtt 9581335  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  9581336 taagctaatttc 9581347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 16498984 - 16499094
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||||||  |||||||||||| |||||||||||||||| |||||||||  |||| || ||||||||||||||||| ||||| ||||||||    
T  16498984 attgtaaacaccttggggtagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaacggatagaaattagggttgtt-tttgtaagcttgtt 16499082  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  16499083 gaagctaatttc 16499094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 29810822 - 29810933
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| || |||||| |||||||||||||||   |||||  ||||||||||| |||||||||||||| ||||||    
T  29810822 attgtaaacaccttgggtgagtgaaaatcattgaatgtcttattcattggtgagattaggaaaatatgtagaaattagagttgttctttgtgaacttgtt 29810921  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  29810922 gaagctaatttc 29810933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 45095119 - 45095228
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||     
T  45095119 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaatgg-tagaaattagggttgttctttgtgaacttgtc 45095216  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  45095217 aaagctaatttc 45095228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 26386683 - 26386597
Alignment:
Q  142 ttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  26386683 ttgggtgagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgt 26386597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 7764422 - 7764529
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| |||||||||||||||||||||||  |||||   |||||||||||||||||||||||||||| ||||||    
T  7764422 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagagggaaaa---gggtagaaattagggttgttctttgtgaacttgtt 7764517  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  7764518 aaagctaatttc 7764529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 37408430 - 37408523
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||| || ||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||| |||||  |||||||||||    
T  37408430 gagtgaaaattattgagtgtcttgttcattggtgagattgggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttc 37408523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 5260537 - 5260426
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| |||||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||    
T  5260537 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttggtcattggtgagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgt 5260439  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  5260438 caaagctaatttc 5260426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 23392123 - 23392012
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcatg-agtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| |||||||||||||  |||||||| |||||||||||| |||  |||||| |||||||||| | ||||||||||||||||||||    
T  23392123 attgtaaacaccttgggtgagtgaaaatcatttagtgtctttttcattggtgagtttgggaaaatgagtagaaattaagtttgttctttgtgagcttgtt 23392024  T
Q  229 gaagctaatttc 240  Q
     ||| |||||||    
T  23392023 taagataatttc 23392012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 23410543 - 23410432
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||| | ||||||||||||| |||||||||||||||| |||| |||   ||||||||||||||||| | || |||||||||||||||||    
T  23410543 attgtaaacaccttgagtgagtgaaaatcattgagtgtcttgttcattagtgaaatttggaaaatgggtagaaattatgtttattctttgtgagcttgtt 23410444  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  23410443 taagctaatttc 23410432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 1683346 - 1683438
Alignment:
Q  33 tggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaa 127  Q
    ||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| || |||||| ||||||||| |||||||||| ||||    
T  1683346 tggtgagtcttgtgagaccaaaagagaagatccttag-aaaatcaaaggctaagggttggttatctttt-ggggttagaatctagagttgggaaa 1683438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 20937516 - 20937613
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||| ||||| || ||||||||||||||| ||||| ||||||||||| ||| ||||| |||||||||||| || |||||||||||||||||||||||||    
T  20937516 ggtgattcttgggagaccaaaagagaagattcttag-gaaatcaaaggataaaggttggttctcttttgggagt-agattctagagttgagaaataattg 20937613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 9636340 - 9636229
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaa-aaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| |||||||||| |||||||||||||||  | ||| |||||||||||||||||||||||||||| |||||    
T  9636340 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttggtcattggtgagattgggagaaaagggtagaaattagggttgttctttgtgaacttgt 9636242  T
Q  228 tgaagctaatttc 240  Q
      || ||||||||    
T  9636241 caaaactaatttc 9636229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 23200350 - 23200241
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||| |||||||||||||| |||||     
T  23200350 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttc-ttggtgagattgggaaaaatggtagaaattagagttgttctttgtgaacttgtc 23200253  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  23200252 aaagctaatttc 23200241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 32744600 - 32744539
Alignment:
Q  178 gtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||    
T  32744600 gtgagattgaaaaaatgggtagaaatta-gtttgttctttgtgagcttgtttaagctaatttc 32744539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 240
Target Start/End: Original strand, 39127421 - 39127612
Alignment:
Q  49 accaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataatt-gtaaacgccttggga 147  Q
    |||||||||||| | |||||| ||||||||||||||||||||  ||||||||| | ||||| |||||||||||  |||| |||| | |||  |||||| |    
T  39127421 accaaaagagaatacccttag-gaaatcaaaggctaagggttagttctctttt-gtggttaaattctagagtttggaaacaattggaaaataccttggaa 39127518  T
Q  148 gagtgaaaatca-tgagtgtcttgttcat-tggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||| |||| ||||| |||||  |  ||||||| | ||||  ||| |||||| | |||||||| |||||||||||||||||||||||    
T  39127519 gagtgaaaatcattgagcgtcttattcatgagaagagattg-agaaataagtataaattatgtttgttcttggtgagcttgttgaagctaatttc 39127612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 5373198 - 5373297
Alignment:
Q  143 tgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaattt 239  Q
    |||| ||| ||||||||| |||||||||||||||||  |||||||  ||||| |||||||||||||| || ||||||| |||||||||||||||||||||    
T  5373198 tgggtgagggaaaatcattgagtgtcttgttcattgaagagattgggaaaaaagggtagaaattaggctttgttctttttgagcttgttgaagctaattt 5373297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 23198151 - 23198042
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||| ||||||||||||  ||||  |||||||||||| |||||| ||||||| |||||     
T  23198151 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttc-ttggtgagattgggaaaaatggtagaaattagagttgttttttgtgaacttgtc 23198054  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  23198053 aaagctaatttc 23198042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 34795728 - 34795821
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaata 129  Q
    ||||||||||| || |||||||||||||||||||||  ||||||||||||||||| || ||||||||| | ||||| |||||| ||||| ||||||    
T  34795728 ggtgagtcttgggagaccaaaagagaagatccttag-aaaatcaaaggctaagggatggttctctttt-gtggttaaattctaaagttgggaaata 34795821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 54739116 - 54739057
Alignment:
Q  180 gagattgaaaaaatgggtagaaattagggtt-gttctttgtgagcttgttgaagctaattt 239  Q
    |||||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||||||    
T  54739116 gagattgaaaaaatgg-tagaaattagtgtttgttctttgtgagcttgttgaaactaattt 54739057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 2075253 - 2075174
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggtt-gttctttgtgagctt 225  Q
    ||||||||||||| ||||||||||||||||||||| ||||  ||||  ||||| |||||| ||| |||||||||||||||    
T  2075253 gagtgaaaatcattgagtgtcttgttcattggtgatattgggaaaaatggtagtaattagagttggttctttgtgagctt 2075174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 36796692 - 36796747
Alignment:
Q  71 gaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaa 127  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| ||||||| ||||    
T  36796692 gaaatcaaaggctaagggttgatt-acttttgagggttagattcaagagttgggaaa 36796747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 25491114 - 25491071
Alignment:
Q  197 tagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||    
T  25491114 tagaaattaggtttgttctttgagagcttgttgaagctgatttc 25491071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 28253416 - 28253370
Alignment:
Q  195 ggtagaaattagggtt-gttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||    
T  28253416 ggtagaaattagggttcgttcattgtgagcttgttgaagttaatttc 28253370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 801091 - 801155
Alignment:
Q  175 ttggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||  |||| ||||||||||||||||||||| |||||| |||||  || ||||||||    
T  801091 ttggtgagattgggaaaa-gggtagaaattagggttgttcattgtgaacttgtcaaatctaatttc 801155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 8166685 - 8166563
Alignment:
Q  117 gagttgagaaataattgtaaacgccttgggagagtgaaaatcat---gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgtt 213  Q
    ||||||| ||| | |||||||| | ||||| | |||||||||||   | ||||||||||||| |  |||||||| ||| || |||||||||||| |||||    
T  8166685 gagttgaaaaacatttgtaaacacattgggtgggtgaaaatcattgagtgtgtcttgttcatggaagagattgataaa-tgagtagaaattaggtttgtt 8166587  T
Q  214 ctttgtgagcttgttgaagctaat 237  Q
    ||| | ||| ||||||||| ||||    
T  8166586 cttggagagtttgttgaagttaat 8166563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 34 - 240
Target Start/End: Complemental strand, 80592 - 80386
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||  |||| |||||    
T  80592 ggtgagtcttgggaaactaaaagagtagatccttagtgaaatcaaaggctaagggttggttctattttgggggttagattctagagttaggaaacaattg 80493  T
Q  134 taaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 233  Q
    | ||| |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  80492 tgaacaccttgggagagtgaaaatcatgagtgtcttgttcattgctgagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagc 80393  T
Q  234 taatttc 240  Q
    |||||||    
T  80392 taatttc 80386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 35 - 240
Target Start/End: Complemental strand, 18309 - 18106
Alignment:
Q  35 gtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattgt 134  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||| |||||||| |||| ||||||    
T  18309 gtgagtcttgtaaaaccaaaagagaagatccttagtgaaatcaaagactaagagttggttctcttttgggg-ttagattatagagttg-gaaacaattgt 18212  T
Q  135 aaacgccttgggagagtgaaaatcatgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagct 234  Q
    |||| | ||||||||||||||||||||||||| |||||||||||||||| ||  ||||| |||||||||||||||||||| |||||||||||||||||||    
T  18211 aaacactttgggagagtgaaaatcatgagtgttttgttcattggtgagagtgggaaaattggtagaaattagggttgttcattgtgagcttgttgaagct 18112  T
Q  235 aatttc 240  Q
    ||||||    
T  18111 aatttc 18106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 34 - 240
Target Start/End: Original strand, 11417 - 11622
Alignment:
Q  34 ggtgagtcttgtgaaaccaaaagagaagatccttagtgaaatcaaaggctaagggttgattctcttttgggggttagattctagagttgagaaataattg 133  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||| ||||  ||||    
T  11417 ggtgagtcttgtgaaaccaaaagagaagatcattagtaaaatcaaaggctaaaggttgtttctctttttggggttagattctagagttgggaaa-cattg 11515  T
Q  134 taaacgccttgggagagtgaaaatca-tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgttgaag 232  Q
    ||||| |||| || |||||||||||| |||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||||| |||||  |||    
T  11516 taaacacctt-ggtgagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaag 11614  T
Q  233 ctaatttc 240  Q
    ||||||||    
T  11615 ctaatttc 11622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 149311 - 149200
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| |||||||  |||||||||||| |||||||||||||||| |||||||||  |||| || ||||||||||||||||| ||||| ||||||||    
T  149311 attgtaaacaccttggggtagtgaaaatcattgagtgtcttgttcatttgtgagattgggaaaacggatagaaattagggttgttttttgtaagcttgtt 149212  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  149211 gaagctaatttc 149200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 114557 - 114667
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||| |||||     
T  114557 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttcattggtgagattgggaaaaagggtagaaattaaggttgttctttgtgaacttgtc 114655  T
Q  229 gaagctaatttc 240  Q
     |||||||||||    
T  114656 aaagctaatttc 114667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 20629 - 20518
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtt 228  Q
    ||||||||| ||||||| ||||||||||||| |||| | || ||||||||||||||||  |||||| | |||||||||| ||||| ||||||| ||||||    
T  20629 attgtaaacaccttgggtgagtgaaaatcattgagtttattattcattggtgagattgggaaaatgagcagaaattaggtttgttttttgtgaacttgtt 20530  T
Q  229 gaagctaatttc 240  Q
    ||||||||||||    
T  20529 gaagctaatttc 20518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 434504 - 434598
Alignment:
Q  148 gagtgaaaatcat-gagtgtcttgttcattggtgagattgaa-aaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    ||||||||||||| ||||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||| |||||  |||||||||||    
T  434504 gagtgaaaatcattgagtgtcttgttcattggtgagattggggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttc 434598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 490468 - 490424
Alignment:
Q  196 gtagaaattagggttgttctttgtgagcttgttgaagctaatttc 240  Q
    |||||||||| | |||||||| | |||||||||||||||||||||    
T  490468 gtagaaattaagtttgttcttggagagcttgttgaagctaatttc 490424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 871 - 981
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattga-aaaaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||||||||||| ||||||||||||| ||||||||||||  ||||| |||||||||||||||||||||||||||| |||||    
T  871 attgtaaacaccttggt-gagtgaaaatcattgagtgtcttgttc-ttggtgagattgggaaaaaagggtagaaattagggttgttctttgtgaacttgt 968  T
Q  228 tgaagctaatttc 240  Q
      |||||||||||    
T  969 caaagctaatttc 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 11375 - 11265
Alignment:
Q  130 attgtaaacgccttgggagagtgaaaatcat-gagtgtcttgttcattggtgagattgaaa-aaatgggtagaaattagggttgttctttgtgagcttgt 227  Q
    ||||||||| ||||||  ||||| ||||||| ||||||||||||| ||||||||||||  | ||| |||||||||||||||||||||||||||| |||||    
T  11375 attgtaaacaccttggt-gagtgtaaatcattgagtgtcttgttc-ttggtgagattgggagaaaagggtagaaattagggttgttctttgtgaacttgt 11278  T
Q  228 tgaagctaatttc 240  Q
      || ||||||||    
T  11277 aaaatctaatttc 11265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 8919 - 8858
Alignment:
Q  160 tgagtgtcttgttcattggtgagattgaaa-aaatgggtagaaattagggttgttctttgtga 221  Q
    |||||||||||||| ||||||||||||  | ||| ||||||||||||||||||||||||||||    
T  8919 tgagtgtcttgttc-ttggtgagattgggagaaaagggtagaaattagggttgttctttgtga 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 10475 - 10540
Alignment:
Q  160 tgagtgtcttgttcattggtgagattgaaaaaatgggtagaaattaggg-ttgttctttgtgagct 224  Q
    ||||||||||||||||| ||||||||| |||||  | || ||||||||| ||||||||||||||||    
T  10475 tgagtgtcttgttcatttgtgagattggaaaaaaagatataaattagggtttgttctttgtgagct 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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