View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5629_low_30 (Length: 337)

Name: NF5629_low_30
Description: NF5629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5629_low_30
NF5629_low_30
[»] chr3 (33 HSPs)
chr3 (11-322)||(47537712-47538023)
chr3 (11-314)||(50544676-50544978)
chr3 (50-322)||(48192243-48192513)
chr3 (11-322)||(23819015-23819319)
chr3 (11-322)||(43121059-43121362)
chr3 (13-321)||(46908057-46908364)
chr3 (58-253)||(21739955-21740150)
chr3 (58-246)||(45684696-45684884)
chr3 (64-288)||(36709388-36709612)
chr3 (170-253)||(14864009-14864092)
chr3 (64-243)||(30166782-30166961)
chr3 (64-246)||(42674877-42675058)
chr3 (64-288)||(15481196-15481419)
chr3 (86-220)||(6175938-6176072)
chr3 (193-243)||(8130474-8130524)
chr3 (273-322)||(26846311-26846360)
chr3 (195-270)||(35537264-35537339)
chr3 (167-212)||(18366123-18366168)
chr3 (122-253)||(24926184-24926315)
chr3 (58-203)||(8943901-8944044)
chr3 (193-235)||(52250691-52250733)
chr3 (194-243)||(25024412-25024461)
chr3 (193-245)||(54439681-54439732)
chr3 (200-258)||(962737-962795)
chr3 (200-241)||(2364802-2364843)
chr3 (200-241)||(16179472-16179513)
chr3 (199-244)||(17039573-17039618)
chr3 (200-241)||(19919803-19919844)
chr3 (202-243)||(25388440-25388481)
chr3 (198-259)||(46189999-46190060)
chr3 (193-258)||(53941811-53941876)
chr3 (71-144)||(55367232-55367305)
chr3 (167-219)||(29309955-29310007)
[»] chr6 (36 HSPs)
chr6 (11-321)||(11060247-11060557)
chr6 (11-318)||(17078575-17078883)
chr6 (11-322)||(18050834-18051145)
chr6 (11-322)||(649466-649762)
chr6 (96-322)||(17873296-17873515)
chr6 (11-258)||(33640426-33640672)
chr6 (11-258)||(502917-503164)
chr6 (122-258)||(19256148-19256284)
chr6 (64-255)||(13086050-13086241)
chr6 (167-253)||(33805293-33805379)
chr6 (122-253)||(4478501-4478635)
chr6 (167-291)||(23065587-23065711)
chr6 (167-258)||(8264731-8264822)
chr6 (64-246)||(21549368-21549550)
chr6 (147-256)||(5085547-5085656)
chr6 (58-270)||(11469065-11469276)
chr6 (86-220)||(23346927-23347061)
chr6 (193-258)||(32186191-32186256)
chr6 (275-322)||(9198901-9198948)
chr6 (194-258)||(26514232-26514296)
chr6 (194-245)||(2923392-2923443)
chr6 (193-243)||(15602847-15602897)
chr6 (200-241)||(14372565-14372606)
chr6 (193-241)||(10362658-10362706)
chr6 (200-258)||(24767003-24767061)
chr6 (200-241)||(2554131-2554172)
chr6 (208-241)||(10922078-10922111)
chr6 (196-245)||(15988080-15988129)
chr6 (200-241)||(17577292-17577333)
chr6 (200-241)||(17605908-17605949)
chr6 (200-241)||(18682148-18682189)
chr6 (58-127)||(19350583-19350652)
chr6 (95-132)||(25035651-25035688)
chr6 (193-258)||(25350730-25350795)
chr6 (167-219)||(15674376-15674428)
chr6 (194-258)||(19350452-19350516)
[»] chr8 (29 HSPs)
chr8 (11-322)||(17659275-17659577)
chr8 (12-322)||(36157599-36157907)
chr8 (45-322)||(45255254-45255525)
chr8 (11-254)||(4987450-4987693)
chr8 (58-243)||(7452875-7453060)
chr8 (111-246)||(44082497-44082632)
chr8 (170-253)||(11393892-11393975)
chr8 (167-253)||(6901422-6901508)
chr8 (167-252)||(12134841-12134926)
chr8 (68-144)||(12341189-12341265)
chr8 (64-217)||(23942636-23942789)
chr8 (196-253)||(24794270-24794327)
chr8 (68-261)||(37165563-37165756)
chr8 (196-239)||(43249363-43249406)
chr8 (193-243)||(4310409-4310459)
chr8 (69-130)||(33988486-33988547)
chr8 (200-241)||(20824824-20824865)
chr8 (193-258)||(25193596-25193661)
chr8 (193-245)||(4331711-4331763)
chr8 (200-255)||(9923112-9923167)
chr8 (200-241)||(172613-172654)
chr8 (200-241)||(7924911-7924952)
chr8 (200-241)||(8300328-8300369)
chr8 (202-259)||(15439631-15439688)
chr8 (202-259)||(15530935-15530992)
chr8 (193-258)||(29721477-29721542)
chr8 (200-241)||(32267087-32267128)
chr8 (193-241)||(38046883-38046931)
chr8 (84-132)||(43249262-43249310)
[»] chr4 (39 HSPs)
chr4 (11-322)||(42778682-42778993)
chr4 (11-322)||(10562718-10563027)
chr4 (11-322)||(20396026-20396337)
chr4 (11-321)||(53486328-53486631)
chr4 (11-222)||(34975079-34975290)
chr4 (13-258)||(19114944-19115189)
chr4 (58-258)||(8935582-8935782)
chr4 (197-322)||(53780489-53780614)
chr4 (122-258)||(23657805-23657941)
chr4 (168-253)||(4524169-4524253)
chr4 (125-318)||(29553239-29553432)
chr4 (64-246)||(26694448-26694630)
chr4 (122-258)||(19648217-19648346)
chr4 (86-220)||(23872936-23873070)
chr4 (192-258)||(49925833-49925899)
chr4 (86-220)||(55299158-55299292)
chr4 (196-253)||(42953064-42953121)
chr4 (64-243)||(7662746-7662926)
chr4 (167-243)||(13158327-13158402)
chr4 (193-243)||(40688589-40688639)
chr4 (167-233)||(53810374-53810440)
chr4 (194-243)||(19162745-19162794)
chr4 (59-216)||(20675572-20675729)
chr4 (287-322)||(34321980-34322015)
chr4 (193-263)||(9690925-9690995)
chr4 (200-241)||(55725280-55725321)
chr4 (193-261)||(36183042-36183110)
chr4 (193-245)||(48805499-48805551)
chr4 (196-243)||(7099005-7099052)
chr4 (200-255)||(19755778-19755833)
chr4 (200-255)||(19783973-19784028)
chr4 (200-241)||(5789666-5789707)
chr4 (202-255)||(19735311-19735364)
chr4 (200-241)||(23642165-23642206)
chr4 (200-241)||(23647823-23647864)
chr4 (200-241)||(47419329-47419370)
chr4 (200-241)||(48312619-48312660)
chr4 (64-100)||(17468547-17468583)
chr4 (193-261)||(56337067-56337135)
[»] scaffold0007 (1 HSPs)
scaffold0007 (11-322)||(182559-182870)
[»] chr5 (29 HSPs)
chr5 (11-322)||(6049665-6049976)
chr5 (12-322)||(20208106-20208415)
chr5 (11-322)||(7000172-7000461)
chr5 (14-258)||(22094638-22094882)
chr5 (58-252)||(30509479-30509673)
chr5 (58-252)||(30549819-30550013)
chr5 (58-246)||(38357987-38358175)
chr5 (170-253)||(19513009-19513092)
chr5 (167-328)||(35122247-35122408)
chr5 (167-288)||(6866842-6866963)
chr5 (181-243)||(10486475-10486537)
chr5 (193-236)||(36256308-36256351)
chr5 (200-241)||(8299756-8299797)
chr5 (194-239)||(34338411-34338456)
chr5 (193-258)||(42259788-42259853)
chr5 (201-241)||(25856999-25857039)
chr5 (197-245)||(26263002-26263050)
chr5 (194-233)||(380434-380473)
chr5 (200-255)||(23238894-23238949)
chr5 (200-255)||(28535249-28535304)
chr5 (193-243)||(15862244-15862294)
chr5 (193-243)||(27325287-27325337)
chr5 (200-258)||(33170166-33170224)
chr5 (200-241)||(27116747-27116788)
chr5 (200-241)||(30731888-30731929)
chr5 (200-241)||(35983365-35983406)
chr5 (200-241)||(42514245-42514286)
chr5 (201-241)||(27165525-27165565)
chr5 (64-100)||(29323559-29323595)
[»] chr1 (25 HSPs)
chr1 (12-322)||(26721077-26721387)
chr1 (12-296)||(28097352-28097635)
chr1 (135-322)||(30110434-30110620)
chr1 (11-211)||(10710596-10710782)
chr1 (11-258)||(25504379-25504626)
chr1 (58-255)||(39430788-39430985)
chr1 (11-202)||(7396107-7396298)
chr1 (238-322)||(10710773-10710857)
chr1 (168-255)||(49264506-49264593)
chr1 (196-255)||(20796179-20796238)
chr1 (58-220)||(32352742-32352904)
chr1 (86-220)||(48072891-48073025)
chr1 (65-144)||(33142652-33142731)
chr1 (203-255)||(17827811-17827863)
chr1 (286-322)||(47106343-47106379)
chr1 (58-133)||(20796290-20796365)
chr1 (195-258)||(20987671-20987734)
chr1 (92-134)||(41456970-41457012)
chr1 (200-241)||(6051128-6051169)
chr1 (194-258)||(19014552-19014615)
chr1 (194-258)||(28358398-28358462)
chr1 (95-143)||(33260162-33260210)
chr1 (95-143)||(33280321-33280369)
chr1 (201-241)||(35541574-35541614)
chr1 (68-144)||(43943920-43943996)
[»] scaffold0179 (2 HSPs)
scaffold0179 (12-322)||(7976-8286)
scaffold0179 (12-322)||(12910-13220)
[»] chr2 (24 HSPs)
chr2 (35-322)||(1380526-1380812)
chr2 (11-322)||(11028314-11028625)
chr2 (12-258)||(15018185-15018431)
chr2 (58-246)||(28399982-28400170)
chr2 (168-255)||(9668548-9668635)
chr2 (64-246)||(35488357-35488539)
chr2 (64-243)||(45422043-45422222)
chr2 (11-227)||(22724824-22725040)
chr2 (196-255)||(11234049-11234108)
chr2 (11-254)||(25380779-25381015)
chr2 (194-255)||(2207390-2207451)
chr2 (92-133)||(29895261-29895302)
chr2 (167-288)||(16213663-16213777)
chr2 (200-255)||(28253231-28253286)
chr2 (193-243)||(13416194-13416244)
chr2 (193-235)||(43310790-43310832)
chr2 (167-220)||(26894153-26894206)
chr2 (167-220)||(26899592-26899645)
chr2 (193-241)||(6727345-6727393)
chr2 (201-241)||(12646061-12646101)
chr2 (193-235)||(26146746-26146788)
chr2 (195-241)||(37445618-37445664)
chr2 (58-144)||(44028652-44028738)
chr2 (200-241)||(14440269-14440310)
[»] chr7 (33 HSPs)
chr7 (11-322)||(34232143-34232447)
chr7 (11-322)||(4077719-4078023)
chr7 (11-258)||(45993084-45993330)
chr7 (58-288)||(18767886-18768116)
chr7 (64-288)||(18671648-18671872)
chr7 (58-255)||(13553616-13553813)
chr7 (147-321)||(33795878-33796052)
chr7 (64-246)||(34457596-34457778)
chr7 (64-243)||(15653146-15653322)
chr7 (64-220)||(46626368-46626524)
chr7 (86-220)||(13440599-13440733)
chr7 (168-235)||(36227692-36227759)
chr7 (194-237)||(11341325-11341368)
chr7 (72-143)||(32482455-32482526)
chr7 (201-243)||(12308690-12308732)
chr7 (193-243)||(17504126-17504176)
chr7 (193-243)||(17549038-17549088)
chr7 (193-243)||(45165126-45165176)
chr7 (167-247)||(5327281-5327362)
chr7 (196-260)||(19544972-19545036)
chr7 (59-135)||(23887714-23887790)
chr7 (59-135)||(23898890-23898966)
chr7 (193-241)||(39931163-39931211)
chr7 (200-255)||(235012-235067)
chr7 (200-255)||(17721146-17721201)
chr7 (195-258)||(23887592-23887655)
chr7 (195-258)||(23898768-23898831)
chr7 (193-243)||(6335971-6336021)
chr7 (195-245)||(22819286-22819336)
chr7 (200-241)||(4937702-4937743)
chr7 (167-208)||(41340091-41340132)
chr7 (95-147)||(12308591-12308643)
chr7 (197-253)||(17856249-17856305)
[»] scaffold0912 (1 HSPs)
scaffold0912 (129-322)||(2376-2569)
[»] scaffold0308 (1 HSPs)
scaffold0308 (58-253)||(17658-17853)
[»] scaffold0002 (2 HSPs)
scaffold0002 (58-243)||(327567-327752)
scaffold0002 (65-243)||(312120-312298)
[»] scaffold0029 (1 HSPs)
scaffold0029 (65-243)||(134293-134471)
[»] scaffold0418 (1 HSPs)
scaffold0418 (64-220)||(8150-8306)
[»] scaffold0113 (1 HSPs)
scaffold0113 (65-144)||(36126-36205)
[»] scaffold0112 (1 HSPs)
scaffold0112 (179-235)||(15203-15259)
[»] scaffold0472 (1 HSPs)
scaffold0472 (200-255)||(3763-3818)
[»] scaffold0026 (1 HSPs)
scaffold0026 (194-240)||(67606-67652)
[»] scaffold0034 (1 HSPs)
scaffold0034 (200-241)||(105417-105458)


Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 47538023 - 47537712
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47538023 catatgaaaatatcttggataggttggcatgatgtgtgctttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 47537924  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||||| |    
T  47537923 taggtaagtgttgttggaggatgctagttgataggagtggcttttggtatcgagtcttagtcgcccgtaatggcgaagtaggtggaaggttggaggttag 47537824  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47537823 gggccagagttgttcttcttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 47537724  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  47537723 ttgggggatggt 47537712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 11 - 314
Target Start/End: Complemental strand, 50544978 - 50544676
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||| ||||||||||| |||||| |||| |||||||||| ||||| ||||||||| ||||||| || |||||| |||||||||||||||||||    
T  50544978 cataggaaaatttcttggataggatggcataatgtatgccttcacaaggagtctggaggtttaggggtgacacagttgaaggaatttaatttggctttgt 50544879  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| |||||||||||||| |||||||||||||| ||||   ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||    
T  50544878 taggaaagtggtgttggaggatgcttgttgataggagtggtttttattatcgagttttagtcgcccg-tttggcgaagtaggtgggaggttggaggtcgg 50544780  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||| || || |||||||  |||||||||||||||||||||||||||||||| || |||    
T  50544779 gggccggagttgttcttcttgatggagggaggtggggcggattagagatgggggaggtgttattggtggaggctggtttggggagtgtgtgtcgaaaaag 50544680  T
Q  311 ttgg 314  Q
    ||||    
T  50544679 ttgg 50544676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 50 - 322
Target Start/End: Complemental strand, 48192513 - 48192243
Alignment:
Q  50 cttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtg 149  Q
    ||||| ||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  48192513 cttcatagggagtttggaggtttgggg-tgcgccggttgaaagaatttaatttggctttattagggaagtggtgttggaggatgctagttgataggagtg 48192415  T
Q  150 gcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcg 249  Q
    |||||||| ||||||| ||||||| |||| | ||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||    
T  48192414 gcttttggtatcgagttttagtcgtccgtat-ggcgaagtaggtgggaggttggaggttgggggttggagtttttcttcttggtggagggaggtagggcg 48192316  T
Q  250 gattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggt 322  Q
    |||||| || || |||| |||  | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  48192315 gattagagaagggggagatgatttaggtggaggttggtttggggagtgtgtgtctaagaagttgggggatggt 48192243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 23819319 - 23819015
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||||||||||||| |||||| || ||| |||||||||| || | |||||||||||||||||||| ||||| |||||| |||||||||  ||||||||    
T  23819319 cataggaaaatatcttagatagggtgacataatgtgtgcctccataaggagtttggaggtttgggggcgagacagttgaaggaatttaatcaggctttgt 23819220  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| |||||||||||||| |||||||||||||| |||||| ||||||| |  |||||||||| |||||||||||||||||||       ||||    
T  23819219 taggaaagtggtgttggaggatgcttgttgataggagtggtttttggtatcgagtttccgtcgcccgttatggcgaagtaggtgggagg-------ttgg 23819127  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||| ||||||||||||| | ||||||||||||| | | |||||||||| || |  ||||| |||||||||||||||||||||||||||||||| ||||||    
T  23819126 gggtcggagttgttcttctaggtggagggaggtggcgaggattagggatggggacggtgatattggtggaggctggtttggggagtgtgtgtcaaagaag 23819027  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  23819026 ttgggggatggt 23819015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 322
Target Start/End: Original strand, 43121059 - 43121362
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||||||||||||||| |||||| |||||||||| || | |||||||||||||||||||||||||  ||||||  | ||||||  ||||||||    
T  43121059 cataggaaaatatcttggatagggtggcataatgtgtgcctccataaggagtttggaggtttgggggtgagatagttgaagaagtttaatcaggctttgt 43121158  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| || || |||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||| ||||||| |       |||| |||||||||    
T  43121159 taggaaaatggtgttggaggatgcttgttgataggagtggtttttggtatcgagttttagtcgcccgttatggcgaaat-------aggtaggaggttgg 43121251  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||||||||||||||| | | |||||||||| || ||  |||| |||||||||||||||||||||||||||||||| ||||||    
T  43121252 gggccggagttgttcttcttggtggagggaggtggcgaggattagggatgg-ggctgtgatattggtggaggctggtttggggagtgtgtgtcaaagaag 43121350  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  43121351 ttgggggatggt 43121362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 13 - 321
Target Start/End: Original strand, 46908057 - 46908364
Alignment:
Q  13 taggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgtta 112  Q
    |||||||||||| ||||||||||||||| |||||||  | || | |||||||||||| ||||||||||| || |||   || |||||||| |||||||||    
T  46908057 taggaaaatatcatggataggttggcataatgtgtgtttacagaaggagtttggagggttgggggtgaggcgtttgtgggagtttaattttgctttgtta 46908156  T
Q  113 ggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggg 212  Q
    |||||||| | |||||||||||| ||||| | |||||| |||||| || |||| |||| ||||||||  |||||| ||| |||||||||| | || ||||    
T  46908157 ggtaagtggtcttggaggatgcttgttgacatgagtggtttttggtatagagttttagccgcccgttacggcgaaatagatgggaggttgta-gtggggg 46908255  T
Q  213 gccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagtt 312  Q
    | |||||||||||| |||||||||||||||| |   ||||||||| ||| || ||||  ||||| ||||| ||||||| |||  ||||||| | |||| |    
T  46908256 gtcggagttgttctgtttggtggagggaggtggctaggattaggggcgggggcggtggtattggaggagggtggtttgaggaaagtgtgtcgaggaaggt 46908355  T
Q  313 gggggatgg 321  Q
    |||||||||    
T  46908356 gggggatgg 46908364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 253
Target Start/End: Original strand, 21739955 - 21740150
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttt-tg 156  Q
    ||||| |||||| |||||||| ||  | ||||  || |||||||| |||||||||||||| || |||||||||||| | || ||||| ||| | ||| ||    
T  21739955 ggagtctggagggttgggggtaaggagattgagggagtttaattttgctttgttaggtaaatggtgttggaggatgttggtagatag-agtaggtttatg 21740053  T
Q  157 gcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    | || | ||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  21740054 gtattgtgttctagtcgcccgttatggcgaagtaggtgggaggttggaggttgggggccggagttgttcttcttggtggagggaggtcgggaggatt 21740150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 246
Target Start/End: Complemental strand, 45684884 - 45684696
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgatag-gagtggcttttg 156  Q
    ||||||||||||||||||||| || || ||||| || |||||| | |||||  ||||||| || |||||||||||| |||| ||||| ||  |||| | |    
T  45684884 ggagtttggaggtttgggggttaggcgattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagtcgatagagaagggctgt-g 45684786  T
Q  157 gcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
    | |||  || |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||  |||||| |||||| ||||||||||    
T  45684785 gtatcaggttttagtcgctcgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtagg 45684696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 288
Target Start/End: Complemental strand, 36709612 - 36709388
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||||||| ||   |||||| || |||||| | |||||  ||||||| || |||||||||||| ||||||| ||    || || ||| |||      
T  36709612 tggaggtttgggggttaggaagttgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgacagagaagggttgtggtatcat 36709513  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtg 263  Q
    || ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||||| |||||| ||||||||||  ||||| | || ||||    
T  36709512 gttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtaggtaggatttgtgatggtg 36709413  T
Q  264 gaggtgacattggtggaggctggtt 288  Q
       ||||||| |||||||| |||||    
T  36709412 tcagtgacataggtggagggtggtt 36709388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 14864009 - 14864092
Alignment:
Q  170 gtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    |||||| ||| |||||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  14864009 gtcgcctgttatggcgaggtgggtgggaggttggaggtggggggccggagttgttcttcttggtggagggaggtagggaggatt 14864092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 30166782 - 30166961
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    |||||||||||||||||| | |||||| |||||||||   |||||||||||||| || |||||| ||||| | ||||| ||  |||| || ||| || |     
T  30166782 tggaggtttgggggtgaggcagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggttgacagaggtggtttgtggtatagt 30166881  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||| ||| | | ||||||| ||||||| |||||||||||||||||||| |||   || | |||||||||||||||    
T  30166882 gtcttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccgaagtatatcgtgttggtggagggaggt 30166961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 42674877 - 42675058
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||| ||||||  | ||||| || |||||| | | |||  ||||||| || |||||||||||| ||||||||||    || || ||| |||      
T  42674877 tggaggtttggaggtgaggagattgaaggagtttaatattgttttactaggtaaatggtgttggaggatgttagttgatagagaagggttgtggtatcag 42674976  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
    || ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||  |||||| |||||| ||||||||||    
T  42674977 gttttagtcgcccgttatggcgaagtagatgggaggttggagg-tgggggccggagtatttctttgtggtggcgggaggtagg 42675058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 288
Target Start/End: Original strand, 15481196 - 15481419
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||||||| ||   |||||| || |||||| | ||||| |||||||| || |||||||||||| ||||||| ||    || || ||| |||      
T  15481196 tggaggtttgggggttaggaagttgaaggagtttaatattgctttattaggtaaatggtgttggaggatgttagttgacagagaagggttgtggtatcat 15481295  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtg 263  Q
    ||  |||||||||||| |||| ||||||||||||||||||||| ||||||||| |||  ||| || |||||| ||||||||||  ||||| | || ||||    
T  15481296 gttctagtcgcccgttatggcaaagtaggtgggaggttggagg-tgggggccgaagtgtttccttgtggtggcgggaggtaggtaggattcgtgatggtg 15481394  T
Q  264 gaggtgacattggtggaggctggtt 288  Q
      |||||||| |||||||| |||||    
T  15481395 tcggtgacataggtggagggtggtt 15481419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 6175938 - 6176072
Alignment:
Q  86 ttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcg 185  Q
    ||||| || |||||||| ||||||||||| || || |||||| ||||||| || || ||  |||| || ||| || | || ||||||||| | | |||||    
T  6175938 ttgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgctggtggacagaggtggtttgtggtatagggttttagtcgccaggtatggcg 6176037  T
Q  186 aagtaggtgggaggttggaggttgggggccggagt 220  Q
    || ||||||| ||||||||||||||||||||||||    
T  6176038 aattaggtggcaggttggaggttgggggccggagt 6176072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 8130524 - 8130474
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  8130524 tgggaggttggaggttgggggccggagtggttctttttggtggaaggaggt 8130474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 26846360 - 26846311
Alignment:
Q  273 ttggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggt 322  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  26846360 ttggtggtggctgatttggggagtgtgtgtctaagaagttgggggatggt 26846311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 35537339 - 35537264
Alignment:
Q  195 ggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtga 270  Q
    |||| |||||||||||||||||||||  ||||| ||||||||||||||| | | |||||||||||| || ||||||    
T  35537339 ggagattggaggttgggggccggagtgattcttattggtggagggaggtggtgaggattagggacgatgtaggtga 35537264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 18366123 - 18366168
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggg 212  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  18366123 ttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggg 18366168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 24926184 - 24926315
Alignment:
Q  122 tgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagtt 221  Q
    |||||||||||| |||| |||||    || || ||| |||| || ||||||||||||| || ||| | | |||||||||||||||||||  ||||||||     
T  24926184 tgttggaggatgttagtggatagagaaggtttgtggtatcgtgttttagtcgcccgttatgacgaggcatgtgggaggttggaggttggtcgccggagtg 24926283  T
Q  222 gttctttttggtggagggaggtagggcggatt 253  Q
    |||||  |||||||  |||||||||| |||||    
T  24926284 gttctacttggtggccggaggtagggaggatt 24926315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 203
Target Start/End: Complemental strand, 8944044 - 8943901
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    ||||| |||||| || |||||||||| ||| || || |||||||| ||| | |||| ||| || |||||||||||||||||| ||||  | ||||| |||    
T  8944044 ggagtatggagggtttggggtgagacagtttaaggagtttaattttgctatcttagataaatggtgttggaggatgctagttcatagaggaggcttatgg 8943945  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttgg 203  Q
    ||  | ||  |||| |||| || ||||||||||||| |||||||||    
T  8943944 ca--gggttctagttgcccattatggcgaagtaggttggaggttgg 8943901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 52250691 - 52250733
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtgg 235  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  52250691 tgggaggttggaggttgggggccggagtggttcttcttggtgg 52250733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 25024412 - 25024461
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||| |||||    
T  25024412 gggaggttggcggttgggggtcggagttgttcttattggtggagagaggt 25024461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 54439681 - 54439732
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtag 245  Q
    |||||||||||||||||||| | ||||||||||||  ||||||||||||||||    
T  54439681 tgggaggttggaggttggggtc-ggagttgttcttcgtggtggagggaggtag 54439732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 962737 - 962795
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||| |||||| ||||||||||| | ||||||||||||| ||| | ||||||||||    
T  962737 ttggaggatgggggtcggagttgttcatcttggtggagggagatagtgaggattaggga 962795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 2364843 - 2364802
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  2364843 ttggaggatgggggccggagttgttcttcgtggtggagggag 2364802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 16179513 - 16179472
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| |||||||||||||||||||| ||||||| |||||    
T  16179513 ttggaggatgggggccggagttgttcttcttggtggcgggag 16179472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 17039573 - 17039618
Alignment:
Q  199 gttggaggttgggggccggagttgttctttttggtggagggaggta 244  Q
    |||||||||||| |||||||||   |||||||||||||||||||||    
T  17039573 gttggaggttggtggccggagtgtgtctttttggtggagggaggta 17039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 19919803 - 19919844
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  19919803 ttggaggatgggggccggagttgttcttcgtggtggagggag 19919844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 25388440 - 25388481
Alignment:
Q  202 ggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| |||| |||||| |||||||||||||||    
T  25388440 ggaggttgggggccagagtggttcttattggtggagggaggt 25388481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 46190060 - 46189999
Alignment:
Q  198 ggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggac 259  Q
    |||||||||||||||||||||||  ||||  ||| ||||||||||||| |  ||||||||||    
T  46190060 ggttggaggttgggggccggagtgtttctaattgatggagggaggtagcgaagattagggac 46189999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 53941876 - 53941811
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||| ||| ||||||||||||  |||||||| |||||||||| ||| |  |||||||||    
T  53941876 tgggaggttggtggtagggggccggagtgattctttttagtggagggagatagcgaagattaggga 53941811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 55367305 - 55367232
Alignment:
Q  71 ttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgatag 144  Q
    |||||||||||   |||||| ||||||||| | || |||||||| || || |||||||||||| ||||||||||    
T  55367305 ttgggggtgaggaagttgaaggaatttaatcttgcgttgttaggaaaatggtgttggaggatgttagttgatag 55367232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 29310007 - 29309955
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggag 219  Q
    ||||||||| | | || |||| ||||||| |||||||||||||||||||||||    
T  29310007 ttagtcgccaggtatgccgaattaggtggcaggttggaggttgggggccggag 29309955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 263; Significance: 1e-146; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 11 - 321
Target Start/End: Original strand, 11060247 - 11060557
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  11060247 catagaaaaatatcttggataggttggcatgatgtgtgctttcatagggagtttggaggtttgggggtgagacggttgaaagaatttaatgtggttttgt 11060346  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  11060347 taggtaagtggtgttggaggatgctagttgataggagtggcttttggtatcgagtcttagttgcccgttatggcgaattaggtgggaggttggaggttgg 11060446  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11060447 gggccggagttgttcttcttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctatgaag 11060546  T
Q  311 ttgggggatgg 321  Q
    |||||||||||    
T  11060547 ttgggggatgg 11060557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 11 - 318
Target Start/End: Original strand, 17078575 - 17078883
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  17078575 cataggaaaatatcttggataggttgggatgatgtgtgccttcacagggagtttggaggtttgggggtgcgacggttgaaagaatttaatttggctttat 17078674  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17078675 taggaaagtggtgttggaggatgctagttgataggagtggtttttggtatcgagtcttagtcgcccgttatggcgaagtaggtgggaggttggaggttgg 17078774  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattaggga-cggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaa 309  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||  || ||||| || ||||||||||||||||||||||||||||||||||||||    
T  17078775 gggccggagttgttcttcttggtggagggaggtagggcggattagagatggggggaggcgatattggtggaggctggtttggggagtgtgtgtctaagaa 17078874  T
Q  310 gttggggga 318  Q
    |||||||||    
T  17078875 gttggggga 17078883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 322
Target Start/End: Original strand, 18050834 - 18051145
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||| |||| ||| |    
T  18050834 cataggaaaatattttggataggttggtatgatgtgtgcctgcatagggagtttggaggtttgggggtgcgacggttgaaataatttaacttggttttat 18050933  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||| || ||| |||||||||||||  || ||||||||||||||||||||||||||||||    
T  18050934 taggaaagtggtgttggaggatgctagttgataggagtggttttcggtatcaagtcttagtcgccgattatggcgaagtaggtgggaggttggaggttgg 18051033  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||   |||||||||||||||||||||||||||||||||||||    
T  18051034 gggccggagttgttcttcttggtggagggaggtagggcggattagagatgggggaggtgattatggtggaggctggtttggggagtgtgtgtctaagaag 18051133  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  18051134 ttgggggatggt 18051145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 322
Target Start/End: Original strand, 649466 - 649762
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |    
T  649466 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggt--------gagacggttgaaagaatttaatttggctttat 649557  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||       |||||||||    
T  649558 taggaaagtggtgttggaggatgctagttgataggagtggtttttggtatcgagtcttagtcgcccgttatggcgaagtaggtg-------ggaggttgg 649650  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||| || |||||||| |||||||||||||||||||||||||||    
T  649651 gggccggagttgttcttcttggtggagggaggtagggcgaattagagacgggggaggtgatataggtggaggttggtttggggagtgtgtgtctaagaag 649750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 96 - 322
Target Start/End: Original strand, 17873296 - 17873515
Alignment:
Q  96 ttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgg 195  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||||  ||||||||||||||| ||||| |||||||||||||||    
T  17873296 ttaatttggctttgttaggaaagtggtgttggaggatgctagtagataggagtggtttttgatatcgagtcttagtcgtccgttatggcgaagtaggtgg 17873395  T
Q  196 gaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggag 295  Q
    |||||||||       || ||||||||||||| ||||||||||||||| ||||||||||| || || |||| |||  ||| ||||| |||||| ||||||    
T  17873396 gaggttgga-------gggcggagttgttcttcttggtggagggaggtggggcggattagagatgggggagatgattttgatggagactggttcggggag 17873488  T
Q  296 tgtgtgtctaagaagttgggggatggt 322  Q
    |||||||||||||||||||||||||||    
T  17873489 tgtgtgtctaagaagttgggggatggt 17873515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 33640672 - 33640426
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||| ||||||||||||||| |   ||| || || || | |||||||||||| || ||||| |||| |||||| || |||||| | || ||      
T  33640672 cataggaaaatgtcttggataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagtttaatgttgccttac 33640573  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| || || |||||||||||| |||| |||||| |||| |||||| || |||| ||||||||||||| |||||| ||  ||||||||||||||||| |    
T  33640572 tagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggtt-g 33640474  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||||||| ||||||| ||||||| ||| ||||||||||    
T  33640473 gggccggagttgttcttcttggtggcgggaggtggggaggattaggga 33640426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 502917 - 503164
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||| |||||||||||||||     ||| || || || | |||||||||||| || ||||| |||| |||||| || |||||| | || ||      
T  502917 cataggaaaatgtcttggataggttggagctctgtttgtctacaaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgccttac 503016  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| || || |||||||||||| |||| |||||| |||| |||||  || |||| ||||||||||||| |||||| ||  ||||||||||||||| |||    
T  503017 tagggaaatggtgttggaggatgttagtggataggggtggtttttgatatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggatgg 503116  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||||||| ||||||| ||||||| ||| ||||||||||    
T  503117 gggccggagttgttcttcttggtggcgggaggtggggaggattaggga 503164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 19256284 - 19256148
Alignment:
Q  122 tgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagtt 221  Q
    |||||||||||| |||| |||||| |||| |||||| || |||| ||||||||||||| |||||| ||  |||||||||||||||||||||||| |||||    
T  19256284 tgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggttgggggccagagtt 19256185  T
Q  222 gttctttttggtggagggaggtagggcggattaggga 258  Q
    |||||| ||||||| ||||||| ||| ||||||||||    
T  19256184 gttcttcttggtggcgggaggtggggaggattaggga 19256148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 255
Target Start/End: Complemental strand, 13086241 - 13086050
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttt-tggcatcg 162  Q
    |||||| |||||||| ||   |||||| || |||||| | |||||||||||||| || |||||||||||| | || ||||| ||| | ||| ||| || |    
T  13086241 tggagggttgggggttaggaagttgaaggagtttaatgttgctttgttaggtaaatggtgttggaggatgttggtagatag-agtaggtttgtggtatag 13086143  T
Q  163 agtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
     ||  |||||||||||| |||||| || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  13086142 tgttctagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttctttttggtggaaggaggtagggaggattag 13086050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 33805379 - 33805293
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    ||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||    
T  33805379 ttagtcgcccgctatggcgaaataggtgggaggttggaggtggggggccggagttgttcttcttggtggcgggaggtagggaggatt 33805293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 122 - 253
Target Start/End: Complemental strand, 4478635 - 4478501
Alignment:
Q  122 tgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggagg---ttgggggccgga 218  Q
    |||||||||||| |||| ||||||   || || ||| |||  || ||||||||||||| ||||||||||||||||||||||||||   ||||||||||||    
T  4478635 tgttggaggatgttagtggatagggaagggttgtggtatcatgttttagtcgcccgttatggcgaagtaggtgggaggttggaggtaattgggggccgga 4478536  T
Q  219 gttgttctttttggtggagggaggtagggcggatt 253  Q
    ||||||||| |||| |||||||||| ||| |||||    
T  4478535 gttgttcttattggcggagggaggttgggaggatt 4478501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 291
Target Start/End: Original strand, 23065587 - 23065711
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtggag 266  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||  ||||||  |||||||||  ||||| | || ||||  |    
T  23065587 ttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccggagtggttcttcgtggtggcaggaggtaggtaggattcgtgatggtgatg 23065686  T
Q  267 gtgacattggtggaggctggtttgg 291  Q
    ||||| | ||||| || ||||||||    
T  23065687 gtgacgtaggtggtgggtggtttgg 23065711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 8264822 - 8264731
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||| ||| |||||| ||  ||||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||| ||||||||||    
T  8264822 ttagtcgcctgttatggcgaggtgtgtgggaggttggaggatgggggccggagttgttcttcttggtggcgggaggtggggaggattaggga 8264731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 21549550 - 21549368
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||||||||||  | ||||| || |||||| | |||||  ||||||| || |||||||||||| ||||||||||    || || ||  |||      
T  21549550 tggaggtttgggggtgaggagattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgatagataagggttgtgatatcag 21549451  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
     | ||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||  |||||| || ||| ||||||||||    
T  21549450 attttagtcgcccgttatggcgaagtagatgggaggttggaggtggggggtcggagtgtttctttgtgctggcgggaggtagg 21549368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 256
Target Start/End: Original strand, 5085547 - 5085656
Alignment:
Q  147 gtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
    |||| |||||| || |||| |||||| | |||| |||||||||  ||||||||||||||| ||||||||| |||||||||| ||||||| ||||||| ||    
T  5085547 gtggtttttggtatagagttttagtcactcgttatggcgaagtctgtgggaggttggaggatgggggccgaagttgttcttcttggtggcgggaggtggg 5085646  T
Q  247 gcggattagg 256  Q
    | ||||||||    
T  5085647 gaggattagg 5085656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 270
Target Start/End: Complemental strand, 11469276 - 11469065
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    ||||||||||||| ||| ||| ||   ||||||||| |||||| | || ||| ||||||| || |||||||||||| | || ||||     || || |||    
T  11469276 ggagtttggaggtctggcggttaggaagttgaaagagtttaatatagcattgctaggtaaatggtgttggaggatgttggtagataaagaagggttgtgg 11469177  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggg 257  Q
     |||| || ||||||||||| | ||| || |||||||||||||||||||  |||||| |||||||||||| ||||||||||||||| ||| ||||| | |    
T  11469176 tatcgtgtgttagtcgcccgatatggtgacgtaggtgggaggttggaggaagggggc-ggagttgttcttcttggtggagggaggttgggaggattcgag 11469078  T
Q  258 acggtggaggtga 270  Q
    | ||||| |||||    
T  11469077 agggtggtggtga 11469065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 23346927 - 23347061
Alignment:
Q  86 ttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcg 185  Q
    ||||| || |||||||| ||||||||||| || || |||||| ||||||| || |||||  |||| || ||| || | || ||||||||| | | |||||    
T  23346927 ttgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgctggtggatagaggtggtttgtggtatagggttttagtcgccaggtatggcg 23347026  T
Q  186 aagtaggtgggaggttggaggttgggggccggagt 220  Q
    || ||||||| ||||||||||||||||||||||||    
T  23347027 aattaggtggcaggttggaggttgggggccggagt 23347061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 32186256 - 32186191
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||| |  |||||||||    
T  32186256 tgggaggttggaggttgggggccggagtgcttcttcttggtggagggaggtagtgaagattaggga 32186191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 9198901 - 9198948
Alignment:
Q  275 ggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggt 322  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  9198901 ggtggaggttggtttggggagtgtgtgtctaagaagttggggaatggt 9198948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 26514296 - 26514232
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||||| ||| |  |||||||||    
T  26514296 gggagtttggaggttgggggccggagtggttctatttggtggagggagatagcgaagattaggga 26514232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 2923443 - 2923392
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggagggaggtag 245  Q
    |||||||||||||||||||| ||||||  ||||| |||||||||||||||||    
T  2923443 gggaggttggaggttgggggacggagtgtttcttcttggtggagggaggtag 2923392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 15602897 - 15602847
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||| ||||||    
T  15602897 tgggaggttggaggatgggggccggagtggttctatttggtggatggaggt 15602847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 14372565 - 14372606
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  14372565 ttggaggatgggggccggagttgttcttcttggtggagggag 14372606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 10362706 - 10362658
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||||||||||| |||||||||||| |||||| ||||||| |||||    
T  10362706 tgggaggttggaggtggggggccggagtggttcttcttggtggcgggag 10362658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 24767003 - 24767061
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||| |||||| |||||||||||||  |||||||||||| ||| | ||||||||||    
T  24767003 ttggaggatgggggtcggagttgttcttcgtggtggagggagatagtgaggattaggga 24767061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 2554172 - 2554131
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  2554172 ttggaggatgggggccggagttgttcttcgtggtggagggag 2554131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 241
Target Start/End: Complemental strand, 10922111 - 10922078
Alignment:
Q  208 tgggggccggagttgttctttttggtggagggag 241  Q
    |||||||||||||||||||| |||||||||||||    
T  10922111 tgggggccggagttgttcttcttggtggagggag 10922078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 15988080 - 15988129
Alignment:
Q  196 gaggttggaggttgggggccggagttgttctttttggtggagggaggtag 245  Q
    ||||||||| ||||||||||| ||| |||||||||| || ||||||||||    
T  15988080 gaggttggacgttgggggccgaagtggttctttttgttgaagggaggtag 15988129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 17577292 - 17577333
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| |||||||| |||||||||||| ||||||||||||    
T  17577292 ttggaggatgggggccagagttgttctttgtggtggagggag 17577333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 17605908 - 17605949
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| |||||||||||||||||||| || ||||||||||    
T  17605908 ttggaggatgggggccggagttgttcttctttgtggagggag 17605949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 18682148 - 18682189
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| |||||||||||||||||||| ||||||| |||||    
T  18682148 ttggaggatgggggccggagttgttcttcttggtggcgggag 18682189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 19350652 - 19350583
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttgg 127  Q
    ||||||||||||| |||||||||| | |||| | ||||||||||| |||||| | ||||| || ||||||    
T  19350652 ggagtttggaggtctgggggtgaggcagttgcaggaatttaatttagctttgatgggtaaatggtgttgg 19350583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 25035651 - 25035688
Alignment:
Q  95 tttaatttggctttgttaggtaagtgttgttggaggat 132  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  25035651 tttaatttgtctttgttaggtaagtggtgttggaggat 25035688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 25350795 - 25350730
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||| ||| ||||||||||||  ||||||||||| ||||||| ||| |  |||||||||    
T  25350795 tgggaggttggtggtagggggccggagtgattctttttggttgagggagatagcgaagattaggga 25350730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 15674428 - 15674376
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggag 219  Q
    ||||||||| | | ||| ||| ||||||| |||||||||||||||||||||||    
T  15674428 ttagtcgccagatatggtgaattaggtggcaggttggaggttgggggccggag 15674376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 19350516 - 19350452
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    |||||||||||||||||||||||||||   || | |||||||| |||||||| |  |||||||||    
T  19350516 gggaggttggaggttgggggccggagtgtatcatcttggtggaaggaggtagcgaagattaggga 19350452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 17659577 - 17659275
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||        |||||||||||||||||||||| |||||||||    
T  17659577 catagaaaaatatcttggataggttggcatgatgtgtgttttc-cagggagtttggaggt--------gagacggttgaaagaatttaatgtggctttgt 17659487  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17659486 taggtaagtggtgttggaggatgctagttgataggagtggcttttggtatcgagtcttagtcgcccgttatggcgaagtaggtgggaggttggaggttgg 17659387  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17659386 gggccggagttgttcttcttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 17659287  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  17659286 ttgggggatggt 17659275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 12 - 322
Target Start/End: Complemental strand, 36157907 - 36157599
Alignment:
Q  12 ataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgtt 111  Q
    |||||||||||||||||||||| |||||| |||||||||| || | |||||||||||||||||||||||||| |||||| || ||||||  |||||||||    
T  36157907 ataggaaaatatcttggatagggtggcataatgtgtgcctccataaggagtttggaggtttgggggtgagacagttgaaggagtttaatcaggctttgtt 36157808  T
Q  112 aggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttggg 211  Q
    ||| ||||| |||||||||||||| |||||||||||||| || ||| || |||| ||||||||||| | |||||||||||||||||||||||||||||||    
T  36157807 aggaaagtggtgttggaggatgcttgttgataggagtggtttgtggtattgagttttagtcgcccg-tatggcgaagtaggtgggaggttggaggttggg 36157709  T
Q  212 ggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagt 311  Q
    |||||||||||||||| ||||||||||||||| | | ||||||| || || ||  |||   |||||||||||||||||||||||| ||||||||||||||    
T  36157708 ggccggagttgttcttcttggtggagggaggtggcgaggattagagatgg-ggcagtgttgttggtggaggctggtttggggagtctgtgtctaagaagt 36157610  T
Q  312 tgggggatggt 322  Q
    |||||||||||    
T  36157609 tgggggatggt 36157599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 45 - 322
Target Start/End: Original strand, 45255254 - 45255525
Alignment:
Q  45 tgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgatag 144  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  45255254 tgtgccttcacagggagtttggaggtttgggggtgagacggttggaagaatttaatttggctttgttaggtaagtgatgttggaggttgttagttgatag 45255353  T
Q  145 gagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggta 244  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| ||||       |||||||||||| ||||||||| ||||||    
T  45255354 gagtggcttttgccatcgagtcttagtcgcccattatggcgaagtaggtgggaggttgggggtt-------ggagttgttcttcttggtggagagaggta 45255446  T
Q  245 gggcggattagggacggtggaggtgacattggtggaggctggtt-tggggagtgtgtgtctaagaagttgggggatggt 322  Q
    ||||||||||| || || ||||| |  ||||||||||||||||| || ||||||||||| ||||||| |||||||||||    
T  45255447 gggcggattagagatgggggaggagttattggtggaggctggttgtgtggagtgtgtgtttaagaaggtgggggatggt 45255525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 4987450 - 4987693
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||| ||||||||||||||| |   ||| || || || | |||||||||||| || ||||| |||| |||||| || |||||| | || ||      
T  4987450 cataggaaaatgtcttggataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagtttaatgttgccttac 4987549  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggtt-g 209  Q
    |||| || || |||||||||||| |||| ||| || |||| |||||| || |||| ||||||||||||| |||||| ||  || |||||||||||||| |    
T  4987550 tagggaaatggtgttggaggatgttagtggatgggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgtgt-ggaggttggaggttgg 4987648  T
Q  210 ggggccggagttgttctttttggtggagggaggtagggcggatta 254  Q
    |||||| ||||||||||| ||||||| ||||||| ||| ||||||    
T  4987649 ggggccagagttgttcttcttggtggcgggaggtggggaggatta 4987693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 7453060 - 7452875
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    ||||| |||||||||||||||||||| |||||| |||||||||   ||||||||||||||||| |||||| ||||| | || || ||  |||| || |||    
T  7453060 ggagtatggaggtttgggggtgagacagttgaatgaatttaatagtgctttgttaggtaagtggtgttggcggatgttggtggacagaggtggtttgtgg 7452961  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
     || |  |||||||  || | | ||||||| ||||||| ||||||||||||||||||||||||  ||| | |||||||||||||||    
T  7452960 tataggatcttagtttccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 7452875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 44082497 - 44082632
Alignment:
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    ||||||| || |||||||||||| ||||||||||    || || ||| |||  || ||||||||||||| ||||||||||||||||||||||||||| ||    
T  44082497 taggtaaatggtgttggaggatgttagttgatagagaagggttgtggtatcaggttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggg 44082596  T
Q  211 gggccggagttgttctttttggtggagggaggtagg 246  Q
    ||| ||||||  |||||| |||||| ||||||||||    
T  44082597 gggtcggagtgtttctttgtggtggcgggaggtagg 44082632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 11393892 - 11393975
Alignment:
Q  170 gtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    |||||||||| |||||| || |||||||||||||||   ||||||||||||||||||| ||||||||||||||||||| |||||    
T  11393892 gtcgcccgttatggcgaggttggtgggaggttggagtcggggggccggagttgttcttcttggtggagggaggtagggaggatt 11393975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 6901508 - 6901422
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||  ||| |||||| |||||    
T  6901508 ttagtcgcccgttatggcgaggtaggtgggaggttggaggttgggggccgaagtggttcttcttggtggcaggaagtagggaggatt 6901422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 12134926 - 12134841
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggat 252  Q
    ||||||||||||| |||||| |||| | |||||||||||||||||||||||||| ||||||| ||||||  |||||||||| ||||    
T  12134926 ttagtcgcccgttatggcgaggtagcttggaggttggaggttgggggccggagtggttctttatggtggcaggaggtagggaggat 12134841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 12341265 - 12341189
Alignment:
Q  68 ggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgatag 144  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||| ||||| |||||||||||| |||| |||||    
T  12341265 ggtttgggggtgagacagttgaaggaatttaatatggctttgttaggaaagtggtgttggaggatgttagtggatag 12341189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 217
Target Start/End: Complemental strand, 23942789 - 23942636
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||||||| ||   |||||| || |||||| | |||||  ||||||| || ||||||||| || ||||||||||    || || ||| |||      
T  23942789 tggaggtttgggggtcaggaagttgaaggagtttaatgttgctttactaggtaaatggtgttggaggttgttagttgatagagaagggttgtggtatcat 23942690  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccgg 217  Q
    || ||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  23942689 gttttagtcgcccgttgtgacgaagtaggtgggaggttggaggtggggggccgg 23942636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 24794327 - 24794270
Alignment:
Q  196 gaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  24794327 gaggttggaggtggggggccggagttgttcttcttggtggagggaggtagggaggatt 24794270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 261
Target Start/End: Original strand, 37165563 - 37165756
Alignment:
Q  68 ggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtct 167  Q
    |||||||||||||| |||||||| ||||||||| | ||| | ||||| ||||| |||||||||||| |||| |||||  | ||||| ||| || | ||      
T  37165563 ggtttgggggtgaggcggttgaaggaatttaatattgctctattaggaaagtgatgttggaggatgttagtggatagaggaggcttgtggtatagggtac 37165662  T
Q  168 tagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacgg 261  Q
    | || ||  | | |||||| |  | |||| |||||||||||||||||||||||  ||||  ||||||||||||| ||| |  ||||||||||||    
T  37165663 tggtggcgagatatggcgaggaggatgggcggttggaggttgggggccggagtgtttctacttggtggagggagatagcgaagattagggacgg 37165756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 43249363 - 43249406
Alignment:
Q  196 gaggttggaggttgggggccggagttgttctttttggtggaggg 239  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  43249363 gaggttagaggttgggggccggagttgttctttttggtggaggg 43249406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 4310409 - 4310459
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  4310409 tgggaggttggaggatgggggccggagtggttctttttggtggaaggaggt 4310459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 33988486 - 33988547
Alignment:
Q  69 gtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggagg 130  Q
    |||||||||||  ||||||||| ||||||||||| ||||| ||||||||||| |||||||||    
T  33988486 gtttgggggtgcaacggttgaaggaatttaattttgctttattaggtaagtggtgttggagg 33988547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 20824865 - 20824824
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  20824865 ttggaggatgggggccggagttgttctttgtggtggagggag 20824824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 25193661 - 25193596
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||||| ||||||||||||  ||||| ||||||||||||| ||| |  |||||||||    
T  25193661 tgggaggttggaggtagggggccggagtgattcttattggtggagggagatagcgaagattaggga 25193596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 4331763 - 4331711
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtag 245  Q
    |||||||||||||||||||| |||||||  ||||| | |||||||||||||||    
T  4331763 tgggaggttggaggttggggaccggagtgtttcttctcggtggagggaggtag 4331711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 9923167 - 9923112
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| | |||||||    
T  9923167 ttggaggatgggggccggagttgttcttcatggtggagggagatagtgaggattag 9923112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 172613 - 172654
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  172613 ttggaggatgggggccggagttgttcttcgtggtggagggag 172654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 7924952 - 7924911
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  7924952 ttggaggatgggggccggagttgttcttcgtggtggagggag 7924911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 8300369 - 8300328
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  8300369 ttggaggatgggggccggagttgttcttcgtggtggagggag 8300328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 15439688 - 15439631
Alignment:
Q  202 ggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggac 259  Q
    ||||||||||||||||||  ||||||||||||||| ||| |||| |  ||||||||||    
T  15439688 ggaggttgggggccggagcggttctttttggtggaaggaagtagtgaagattagggac 15439631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 15530992 - 15530935
Alignment:
Q  202 ggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggac 259  Q
    ||||||||||||||||||  ||||||||||||||| ||| |||| |  ||||||||||    
T  15530992 ggaggttgggggccggagcggttctttttggtggaaggaagtagtgaagattagggac 15530935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 29721477 - 29721542
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||||| ||||||||||||   |||| ||||||||||||| ||| |  |||||||||    
T  29721477 tgggaggttggaggtagggggccggagtgtctcttattggtggagggagatagcgaagattaggga 29721542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 32267128 - 32267087
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  32267128 ttggaggttgggggccggagttgttcgtcgtggtggagggag 32267087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 38046931 - 38046883
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    |||||||||||||| ||||||||| ||||||||||  || |||||||||    
T  38046931 tgggaggttggaggatgggggccgaagttgttcttcgtgatggagggag 38046883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 43249262 - 43249310
Alignment:
Q  84 ggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggat 132  Q
    |||||| ||| |||||||| |||||||||||||| || |||||||||||    
T  43249262 ggttgagagagtttaattttgctttgttaggtaaatggtgttggaggat 43249310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 42778993 - 42778682
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  42778993 cataggaaaatatcttggataggttggcatgatgtgtgccttcatagggagtttggaggtttgggggtgagacggttgaaagaattcaatttggctttat 42778894  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  42778893 taggaaagtggtgttggaggatgctaattgataggagtggcttttggtatcgagtcttagtcgcccgttatggcgaagtaggcgggaggttggaggttgg 42778794  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||  || |||||||| |||||||| ||||||||||||||||||    
T  42778793 gggccggagttgttcttcttggtggagggagatagggcggattagagacgggggaggtgttataggtggaggttggtttggagagtgtgtgtctaagaag 42778694  T
Q  311 ttgggggatggt 322  Q
    |||||| |||||    
T  42778693 ttggggaatggt 42778682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 322
Target Start/End: Original strand, 10562718 - 10563027
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10562718 cataggaaaatatcttggataggttggcataatgtgtgccttcacagggagtttggaggtttgggggtgagacagttgaaagaatttaatttggctttgt 10562817  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10562818 taggaaagtggtgttggaggatgctagtagataggagtggcttttggtatcgagtcttagtcgcccgttatggcgaagtaggtgggaggttggaggttgg 10562917  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| || || |||| |||  ||||||||| |||||| |||||  ||||||||||||||    
T  10562918 gggccagagttgttcttcttggtggagggaggtagggcggattagagatgggggagatgattttggtggagactggttcgggga--gtgtgtctaagaag 10563015  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  10563016 ttgggggatggt 10563027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 20396337 - 20396026
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| | |||||||||||||||||||||||||| |    
T  20396337 catagaaaaatatcttggataggttggcatgatgtgtgtctgcagagggagtttggaggtttgggggtgcgtcggttgaaagaatttaatttggctttat 20396238  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||    
T  20396237 taggaaagtggtgttggaggatgctagttgataggagtggattttggtatcgagtctcagtcgcccgttatggcgaagtgggtgggaggttggagtttgg 20396138  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| || || ||||||||   ||||||||| |||||||||||||||||||||||||||    
T  20396137 gggccggagttgttcttcttggtggcgggaggtagggcggattagagatgggggaggtgattatggtggaggttggtttggggagtgtgtgtctaagaag 20396038  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  20396037 ttgggggatggt 20396026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 321
Target Start/End: Original strand, 53486328 - 53486631
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |    
T  53486328 cataggaaaatatcttggataggttggcatgatgcgtgccttcacagggagtttggaggtttgagggtgagacggttgaaagaaattaatttggctttat 53486427  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| ||||||||||||||||||||||||| ||| |||||| ||||||| ||||||||||||| ||||||||||||||       |||||||||    
T  53486428 taggaaagtggtgttggaggatgctagttgataggaatggtttttggtatcgagttttagtcgcccgttatggcgaagtaggtg-------ggaggttgg 53486520  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  || |||||||| ||||||||||||||||||||||||| |    
T  53486521 gggtcggagttgttcttcttggtggagggaggtagggcggattagggacgggggaggtgttataggtggaggttggtttggggagtgtgtgtctaagatg 53486620  T
Q  311 ttgggggatgg 321  Q
    |||||||||||    
T  53486621 ttgggggatgg 53486631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 11 - 222
Target Start/End: Complemental strand, 34975290 - 34975079
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  34975290 cataggaaaatatcttggataggttggcataatgtgtgcattcacaaggagtttggaggtttgggggtgagacagttgaaggaatttaatttgactttgt 34975191  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    | || || || ||||||||||| |||||||||||||||||||||||| |||  || ||||||| ||||| || ||||||||||||||||||| |||||||    
T  34975190 tgggaaaatggtgttggaggatactagttgataggagtggcttttggtatcatgttttagtcgtccgttatgacgaagtaggtgggaggttgaaggttgg 34975091  T
Q  211 gggccggagttg 222  Q
    ||||||||||||    
T  34975090 gggccggagttg 34975079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 258
Target Start/End: Complemental strand, 19115189 - 19114944
Alignment:
Q  13 taggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgtta 112  Q
    |||||||||||||||||||| ||||  |  ||| || || || | |||||||||||| || ||||| |||| |||||| || |||||| | ||||| |||    
T  19115189 taggaaaatatcttggatagcttggagttctgtttgtctccaaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgctttatta 19115090  T
Q  113 ggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggg 212  Q
    || || || ||||||||| || |||| |||||| |||| |||||| || |||| |||||||| |||| |||||||||| |||||||||||||||||||||    
T  19115089 gggaaatggtgttggaggttgttagtggataggggtggattttggtatagagttttagtcgctcgttatggcgaagtatgtgggaggttggaggttgggg 19114990  T
Q  213 gccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||| ||||||||||| ||||||| ||||||||||| ||||||||||    
T  19114989 gccagagttgttcttcttggtggcgggaggtagggaggattaggga 19114944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 258
Target Start/End: Complemental strand, 8935782 - 8935582
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    |||||||||||| || ||||| |||| |||||| || |||||| | || ||  |||| || || |||||||||||| |||| |||||| |||| ||||||    
T  8935782 ggagtttggagggttaggggttagacagttgaaggagtttaatattgccttactagggaaatggtgttggaggatgttagtggataggggtggtttttgg 8935683  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggg 257  Q
     || |||| |||||||| |||| |||||| ||  ||||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||| |||||||||    
T  8935682 tatagagttttagtcgctcgttatggcgaggtgtgtgggaggttggaggatgggggccggagttgttcttcttggtggcgggaggtggggaggattaggg 8935583  T
Q  258 a 258  Q
    |    
T  8935582 a 8935582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 53780614 - 53780489
Alignment:
Q  197 aggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagt 296  Q
    |||| |||||||||||| | ||||||||||| ||||||||||||||| || |||||||| || || |||| |||  ||||||||| |||||| |||||||    
T  53780614 aggtgggaggttgggggtcagagttgttcttcttggtggagggaggttggacggattagagatgggggagatgattttggtggagactggttcggggagt 53780515  T
Q  297 gtgtgtctaagaagttgggggatggt 322  Q
    |||||||||||||||| |||||||||    
T  53780514 gtgtgtctaagaagttaggggatggt 53780489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 23657941 - 23657805
Alignment:
Q  122 tgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagtt 221  Q
    ||||| |||||| |||| |||||| |||| |||||| || |||| ||||||||||||| | |||| ||  ||||||||||||||| ||||||||| ||||    
T  23657941 tgttgaaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatagcgaggtgtgtgggaggttggaggatgggggccgaagtt 23657842  T
Q  222 gttctttttggtggagggaggtagggcggattaggga 258  Q
    |||||| ||||||| |||||||  || ||||||||||    
T  23657841 gttcttcttggtggcgggaggtgaggaggattaggga 23657805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 4524169 - 4524253
Alignment:
Q  168 tagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||    
T  4524169 tagtcgcccgtat-ggcgaagtaggcgggaggttggaggttgggggccggagttgttcttcttggtggcaggaggtagggaggatt 4524253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 125 - 318
Target Start/End: Original strand, 29553239 - 29553432
Alignment:
Q  125 tggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgtt 224  Q
    ||||||||| |||| |||||  |||| |||||| || |||| |||||| |||||| ||| || ||  ||||||||||||||| ||||||||||||| |||    
T  29553239 tggaggatgttagtggatagaggtggtttttggtatagagttttagtcacccgttatggtgaggtttgtgggaggttggaggatgggggccggagtggtt 29553338  T
Q  225 ctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagttggggga 318  Q
    |||| |||||| |||||||  ||| ||||||||| ||  | ||||    ||| ||||| ||||||  ||||||||||||||||||  |||||||    
T  29553339 ctttgtggtggcgggaggttaggcagattagggatgggagtggtggtgctgggggaggatggtttcaggagtgtgtgtctaagaaagtggggga 29553432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 26694630 - 26694448
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagt-ggcttttggcatcg 162  Q
    ||||||||||||||||||  | ||||| || |||||| | |||||  ||||||| || |||||||||||| |||| ||||| ||| || ||  || |||     
T  26694630 tggaggtttgggggtgaggagattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagtggatag-agtagggttgcggtatca 26694532  T
Q  163 agtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
     || ||||||| ||||| ||||||||||| ||||||||||||||| |||||| |||||  |||||| |||||| ||||||||||    
T  26694531 ggttttagtcgtccgttatggcgaagtagatgggaggttggaggtggggggctggagtgtttctttgtggtggcgggaggtagg 26694448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 258
Target Start/End: Complemental strand, 19648346 - 19648217
Alignment:
Q  122 tgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagtt 221  Q
    |||||||||||| |||| |||||| |||| |||||| || |||| ||||||||| ||| |||||| ||  ||||||||||||       |||||||||||    
T  19648346 tgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcctgttatggcgaggtgtgtgggaggttgg-------gggccggagtt 19648254  T
Q  222 gttctttttggtggagggaggtagggcggattaggga 258  Q
    |||||| ||||||| ||||||| ||| ||||||||||    
T  19648253 gttcttcttggtggcgggaggtggggaggattaggga 19648217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 23872936 - 23873070
Alignment:
Q  86 ttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcg 185  Q
    ||||| || |||||||| ||||||||||| || || |||||| ||||| | || |||||  |||| || ||| |||| || ||||||||| | | |||||    
T  23872936 ttgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggtagatagaggtggtttgtggtatcgggttttagtcgccaggtatggcg 23873035  T
Q  186 aagtaggtgggaggttggaggttgggggccggagt 220  Q
    || ||||||| ||||||||||||||||||||||||    
T  23873036 aattaggtggcaggttggaggttgggggccggagt 23873070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 49925833 - 49925899
Alignment:
Q  192 gtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||  |||||||||    
T  49925833 gtgggaggttggaggttgggggccggagttgttcttcttggtggcgggaggtggggaagattaggga 49925899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 55299292 - 55299158
Alignment:
Q  86 ttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcg 185  Q
    ||||| || |||||||| ||||||||||| || || |||||| ||||| | || |||||  |||| || ||| |||| || ||||||||| | | |||||    
T  55299292 ttgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggtggatagaggtggtttgtggtatcgggttttagtcgccaggtatggcg 55299193  T
Q  186 aagtaggtgggaggttggaggttgggggccggagt 220  Q
    || ||||||| ||||||||||||||||||||||||    
T  55299192 aattaggtggcaggttggaggttgggggccggagt 55299158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 42953064 - 42953121
Alignment:
Q  196 gaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  42953064 gaggttggaggtggggggccggagttgttcttcttggtggagggaggtagggaggatt 42953121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 7662746 - 7662926
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    |||||||||||||||||||| |||||| |||||||||   |||||||||||||| || |||||| ||||| | || || ||  |||| || ||| || |     
T  7662746 tggaggtttgggggtgagacagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggacagaggtggtttgtggtatagt 7662845  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggtt-gggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||| ||  | | ||||||| ||||||| || ||||||||| ||||||||||||  ||| | ||||||| |||||||    
T  7662846 gtcttagttgctaggtatggcgaattaggtggcagattggaggttcgggggccggagtgtttcgtgttggtggggggaggt 7662926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 13158327 - 13158402
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||||||  ||||||||||| |||||||||||||||    
T  13158327 ttagtcacccgttatggcgaagcaggtgggaggttggagg-tgggggctagagttgttcttcttggtggagggaggt 13158402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 40688639 - 40688589
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  40688639 tgggaggttggaggatgggggccggagtggttctttttggtggaaggaggt 40688589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 53810440 - 53810374
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggt 233  Q
    ||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||  ||||| |||||    
T  53810440 ttagtcgtctgttatggcgaagtaggtgggaggttggaggtggggggccggagtgattcttcttggt 53810374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 19162745 - 19162794
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  19162745 gggaggttggaggatgggggccggagtggttctttttggtggaaggaggt 19162794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 20675729 - 20675572
Alignment:
Q  59 gagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggc 158  Q
    |||||||| |||||||||||| |    ||||| || |||||||| ||||||||||| || || |||||| ||||| | || || ||  |||| || |||     
T  20675729 gagtttggtggtttgggggtgcggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggtggacagaggtggtttgtggt 20675630  T
Q  159 atcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccg 216  Q
    || | || ||||||||| | | ||||||| ||||||| ||||||||||||||||||||    
T  20675629 atagggttttagtcgccaggtatggcgaaataggtggcaggttggaggttgggggccg 20675572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 34321980 - 34322015
Alignment:
Q  287 tttggggagtgtgtgtctaagaagttgggggatggt 322  Q
    ||||||||||||||||||||||||||||||||||||    
T  34321980 tttggggagtgtgtgtctaagaagttgggggatggt 34322015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 9690995 - 9690925
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtg 263  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||||| ||| |  ||||||||| ||||    
T  9690995 tgggaggttggaggttgggggccggagtgtttctcattggtggagggagatagcgaagattagggatggtg 9690925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 55725280 - 55725321
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  55725280 ttggaggatgggggccggagttgttcttcttggtggagggag 55725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 36183110 - 36183042
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacgg 261  Q
    |||| |||||||||||||||||||||||  ||||  ||||||||||||| ||| |  ||||||||||||    
T  36183110 tgggcggttggaggttgggggccggagtgtttctacttggtggagggagatagcgaagattagggacgg 36183042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 48805551 - 48805499
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtag 245  Q
    ||||||||||||| ||||| |||||||| ||||||| ||||||| ||||||||    
T  48805551 tgggaggttggagattgggtgccggagtggttctttgtggtggaaggaggtag 48805499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 7099052 - 7099005
Alignment:
Q  196 gaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    ||||||||||| ||||||||||||| ||||| ||||||||| ||||||    
T  7099052 gaggttggaggatgggggccggagtggttctatttggtggaaggaggt 7099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 19755833 - 19755778
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| | |||||||    
T  19755833 ttggaggatgggggccggagttgttcttcgtggtggagggagatagtgaggattag 19755778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 19783973 - 19784028
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| | |||||||    
T  19783973 ttggaggatgggggccggagttgttcttcgtggtggagggagatagtgaggattag 19784028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 5789666 - 5789707
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| |||||||||||||||||||| ||||||| |||||    
T  5789666 ttggaggatgggggccggagttgttcttcttggtggcgggag 5789707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 19735311 - 19735364
Alignment:
Q  202 ggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||| |||||||||||||||||||| ||||||| ||||| ||| | |||||||    
T  19735311 ggaggatgggggccggagttgttcttcttggtggcgggagatagtgaggattag 19735364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 23642165 - 23642206
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  23642165 ttggaggatgggggccggagttgttcttcgtggtggagggag 23642206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 23647823 - 23647864
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  23647823 ttggaggatgggggccggagttgttcttcgtggtggagggag 23647864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 47419370 - 47419329
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  47419370 ttggaggatgggggccggagttgttcttcgtggtggagggag 47419329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 48312660 - 48312619
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  48312660 ttggaggatgggggccggagttgttcttcgtggtggagggag 48312619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 17468547 - 17468583
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaat 100  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  17468547 tggaggtttgggggtgaaacggttgaaggaatttaat 17468583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 56337067 - 56337135
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacgg 261  Q
    |||| |||||||||||||||| ||||||  ||||  ||||||||||||| ||| |  ||||||||||||    
T  56337067 tgggcggttggaggttgggggtcggagtgtttctacttggtggagggagatagcgaagattagggacgg 56337135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 182870 - 182559
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| | |||||||||||||||||||||||||| |    
T  182870 catagaaaaatatcttggataggttggcatgatgtgtgtctgcagagggagtttggaggtttgggggtgcgtcggttgaaagaatttaatttggctttat 182771  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||    
T  182770 taggaaagtggtgttggaggatgctagttgataggagtggattttggtatcgagtctcagtcgcccgttatggcgaagtgggtgggaggttggagtttgg 182671  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| || || ||||||||   ||||||||| |||||||||||||||||||||||||||    
T  182670 gggccggagttgttcttcttggtggcgggaggtagggcggattagagatgggggaggtgattatggtggaggttggtttggggagtgtgtgtctaagaag 182571  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  182570 ttgggggatggt 182559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-118; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 6049976 - 6049665
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6049976 cataggaaaatatcttggataggttggcatgatgtgagccttcacagggagtttggaggtttgggggtgagacggttgaaaaaatttaatttggctttgt 6049877  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| |||||  ||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| |    
T  6049876 taggaaagtggggttagaggttgttagttgataggagtggcttttggtatcgagtcttagtcgcccgttatggtgaagtaggtgggaggttggaggttag 6049777  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||| |||||||||||  |||||||||||||||||||||||||| || || |||||||  ||||||||||| ||||||||||||||||||| |||||||    
T  6049776 gggccagagttgttcttcctggtggagggaggtagggcggattagagatgggggaggtgttattggtggaggttggtttggggagtgtgtgtttaagaag 6049677  T
Q  311 ttgggggatggt 322  Q
    ||  ||||||||    
T  6049676 ttaagggatggt 6049665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 322
Target Start/End: Original strand, 20208106 - 20208415
Alignment:
Q  12 ataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || ||||||||||||||    
T  20208106 ataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggtggtttgggggtgagacagttgagagagttcaatttggctttgtt 20208205  T
Q  112 aggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttggg 211  Q
    ||| ||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  20208206 aggaaagtggtgttggaggatgctagtagataggagtggtttttggtatcgagtcttagtcgcccg-tatggcgaagtaggtgggaggttggaggttggg 20208304  T
Q  212 ggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagt 311  Q
    |||||||||||||| ||||||||||||||||| |||  |||||| || || ||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  20208305 ggccggagttgttcgttttggtggagggaggtggggtagattagagatgggggaggtgattttggtggtggctggtttggggagtgtgtgtctaagaagt 20208404  T
Q  312 tgggggatggt 322  Q
    | |||||||||    
T  20208405 ttggggatggt 20208415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 322
Target Start/End: Original strand, 7000172 - 7000461
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  7000172 cataggaaaatatcttggataggttggcatgatgtgtgccttcatagggagtttggaggtttgggggtgagacagttgaaagaatttaatttgcctttgt 7000271  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||       |||||||||    
T  7000272 taggtaagtggtgttggaggatgctagttgataggagtggcttttggtatcgagtcttagtcgcccgttatggcgaagtaggtg-------ggaggttgg 7000364  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||| ||||||||||| ||||||||||||||||||| |||||||||||               ||||||||||||||||||||||||||||| ||||||    
T  7000365 gggccagagttgttcttcttggtggagggaggtagggaggattagggac---------------ggtggaggctggtttggggagtgtgtgtccaagaag 7000449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 22094638 - 22094882
Alignment:
Q  14 aggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttag 113  Q
    |||||||||||||||||||| |||  |  ||| || || || | |||||||||||| || ||||| |||| |||||| || |||||| | |||||  |||    
T  22094638 aggaaaatatcttggataggctggtcttctgtttgtctccaaaaggagtttggagggttaggggttagacagttgaaggagtttaatattgctttactag 22094737  T
Q  114 gtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttggggg 213  Q
    | ||||| |||||||||||| |||| |||||| |||| |||||| || |||| |||||||| |||| |||||| ||  ||||||||||||||| ||||||    
T  22094738 ggaagtggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgctcgttatggcgaggtttgtgggaggttggaggatggggg 22094837  T
Q  214 ccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||| ||||||||||  |||||| ||||||| ||| | ||||||||    
T  22094838 ccgaagttgttcttcgtggtggcgggaggtggggagaattaggga 22094882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 30509479 - 30509673
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    |||||| ||||| |||||||| ||   |||||| ||||||||| | |||||| |||| || || ||||||||| || |||| |||||   |||||| |||    
T  30509479 ggagttaggagggttgggggttaggaagttgaaggaatttaatgtagctttgctagggaaatggtgttggaggttgttagtagatagagatggcttgtgg 30509578  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggat 252  Q
     |||  || ||||||||||||| ||||||  | |||||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  30509579 tatcaggttttagtcgcccgttatggcgagatcggtgggagattggaggtggggggccggagttgttcttcttggtggcgggaggtagggaggat 30509673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 252
Target Start/End: Original strand, 30549819 - 30550013
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    |||||| ||||| |||||||| ||   |||||| ||||||||| | |||||| |||| || || ||||||||| || |||| |||||   |||||| |||    
T  30549819 ggagttaggagggttgggggttaggaagttgaaggaatttaatgtagctttgctagggaaatggtgttggaggttgttagtagatagagatggcttgtgg 30549918  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggat 252  Q
     |||  || ||||||||||||| ||||||  | |||||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  30549919 tatcaggttttagtcgcccgttatggcgagatcggtgggagattggaggtggggggccggagttgttcttcttggtggcgggaggtagggaggat 30550013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 246
Target Start/End: Complemental strand, 38358175 - 38357987
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    ||||||||||||||||||||| ||  | ||||| || |||||| | |||||  ||||||| || |||||||||||| ||||||||||    |  || |||    
T  38358175 ggagtttggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgatagagaagagttgtgg 38358076  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
     |||   | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  ||| || |||||| ||||||||||    
T  38358075 tatcagattttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttccttgtggtggcgggaggtagg 38357987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 19513009 - 19513092
Alignment:
Q  170 gtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    |||||||||| |||||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  19513009 gtcgcccgttatggcgaggttggtgggaggttggaggtggggggccggagttgttcttcttggtggagggaggtagggaggatt 19513092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 328
Target Start/End: Original strand, 35122247 - 35122408
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtggag 266  Q
    ||||||||||||| ||||||| ||||||| ||||||||||| ||||||| ||||||||||| ||||||| ||||||||||| ||||| | || ||||  |    
T  35122247 ttagtcgcccgttatggcgaaataggtggaaggttggaggtggggggccagagttgttcttcttggtggcgggaggtagggaggatttgtgagggtgttg 35122346  T
Q  267 gtgacattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggtgatgat 328  Q
    ||||  | || || || |||||||||||  |||||  || |||| |||||||||||| ||||    
T  35122347 gtgatgtagggggtggttggtttggggatagtgtgcttaggaaggtgggggatggtgctgat 35122408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 167 - 288
Target Start/End: Complemental strand, 6866963 - 6866842
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtggag 266  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||  |||||| |||||||||   ||||| | || ||||  |    
T  6866963 ttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccagagtggttcttcgtggtggcgggaggtagataggattcgtgatggtgacg 6866864  T
Q  267 gtgacattggtggaggctggtt 288  Q
    ||||||| |||||||| |||||    
T  6866863 gtgacataggtggagggtggtt 6866842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 10486475 - 10486537
Alignment:
Q  181 tggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    ||||||| ||||||| ||||||||||||||||||||||||  ||| | |||||||||||||||    
T  10486475 tggcgaattaggtggcaggttggaggttgggggccggagtgtttcgtgttggtggagggaggt 10486537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 36256351 - 36256308
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtgga 236  Q
    |||||||||||||| ||||||||||||| |||||||||||||||    
T  36256351 tgggaggttggaggatgggggccggagtggttctttttggtgga 36256308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 8299756 - 8299797
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  8299756 ttggaggatgggggccggagttgttctttgtggtggagggag 8299797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 34338456 - 34338411
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggaggg 239  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||    
T  34338456 gggaggttggaggttgggggccggagtgtttcttcttggtggaggg 34338411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 42259853 - 42259788
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    |||||| |||||||||||| ||||||||  ||||| ||||||||||||||||| |  |||||||||    
T  42259853 tgggagtttggaggttgggagccggagtgcttcttcttggtggagggaggtagtgaagattaggga 42259788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 25856999 - 25857039
Alignment:
Q  201 tggaggttgggggccggagttgttctttttggtggagggag 241  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  25856999 tggaggatgggggccggagttgttctttgtggtggagggag 25857039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 26263002 - 26263050
Alignment:
Q  197 aggttggaggttgggggccggagttgttctttttggtggagggaggtag 245  Q
    ||||||| || ||||||||||||| | ||||||||||||||||||||||    
T  26263002 aggttggtgggtgggggccggagtgggtctttttggtggagggaggtag 26263050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 380473 - 380434
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggt 233  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  380473 gggaggttggaggttgggggccggagtggttcttcttggt 380434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 23238949 - 23238894
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    |||||||||||||||||||||||||| |  |||||||||||| ||| | |||||||    
T  23238949 ttggaggttgggggccggagttgttcgtcgtggtggagggagatagtgaggattag 23238894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 28535249 - 28535304
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| | |||||||    
T  28535249 ttggaggatgggggccggagttgttcttcatggtggagggagatagtgaggattag 28535304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 15862244 - 15862294
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||| ||||||||||||||||  |||||||||| | |||||||||||||||    
T  15862244 tgggcggttggaggttgggggatggagttgttcgtattggtggagggaggt 15862294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 27325337 - 27325287
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| ||||| ||||||  ||||||| ||||||||||||||    
T  27325337 tgggaggttggaggatggggaccggaggggttctttgtggtggagggaggt 27325287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 33170224 - 33170166
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||| |||||||||||||||||| | ||||||| ||||| ||| | ||||||||||    
T  33170224 ttggaggatgggggccggagttgttcatcttggtggcgggagatagtgaggattaggga 33170166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 27116747 - 27116788
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  27116747 ttggaggatgggggccggagttgttcttcgtggtggagggag 27116788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 30731888 - 30731929
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  30731888 ttggaggatgggggccggagttgttcttcatggtggagggag 30731929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 35983365 - 35983406
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  35983365 ttggaggatgggggccggagttgttcttcgtggtggagggag 35983406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 42514286 - 42514245
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  42514286 ttggaggatgggggccggagttgttcttcgtggtggagggag 42514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 27165525 - 27165565
Alignment:
Q  201 tggaggttgggggccggagttgttctttttggtggagggag 241  Q
    |||||| ||||||||| |||||||||| |||||||||||||    
T  27165525 tggaggatgggggccgaagttgttcttcttggtggagggag 27165565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 29323595 - 29323559
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaat 100  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  29323595 tggaggtttgggggtgaaacggttgaaggaatttaat 29323559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 12 - 322
Target Start/End: Complemental strand, 26721387 - 26721077
Alignment:
Q  12 ataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || ||||||||||||||    
T  26721387 ataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggtggtttgggggtgagacagttgagagagttcaatttggctttgtt 26721288  T
Q  112 aggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttggg 211  Q
    ||  ||||| ||||||||||||||||| ||||||||||  |||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||    
T  26721287 agaaaagtggtgttggaggatgctagtagataggagtgatttttggtatcgagtcttagtcgtccgttatggcgaagtaggtgggaggttggaggttagg 26721188  T
Q  212 ggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagt 311  Q
    |||||||||||||| | ||||||||||||||| ||||||||||| || |  ||||||||  ||||||| |||||||||||||||||||||||||||||||    
T  26721187 ggccggagttgttcgtcttggtggagggaggtggggcggattagagatgtgggaggtgattttggtggtggctggtttggggagtgtgtgtctaagaagt 26721088  T
Q  312 tgggggatggt 322  Q
    |||||||||||    
T  26721087 tgggggatggt 26721077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 12 - 296
Target Start/End: Original strand, 28097352 - 28097635
Alignment:
Q  12 ataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgtt 111  Q
    |||||||||||||||||||||| |||||| |||||||||| || | |||||||||||||||||||||||||| |||||| || ||||||  |||||||||    
T  28097352 ataggaaaatatcttggatagggtggcataatgtgtgcctccataaggagtttggaggtttgggggtgagacagttgaaggagtttaatcaggctttgtt 28097451  T
Q  112 aggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttggg 211  Q
    ||| ||||| |||||||| ||||| |||||||| ||||  || ||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||    
T  28097452 aggaaagtggtgttggagtatgcttgttgatagtagtgatttgtggtatcgagttttagtcgcccgttatggcgaagtaggtgggaggttggaggtt-gg 28097550  T
Q  212 ggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagt 296  Q
    |||||||||| ||||| ||||||||||||||| | | |||||||||| || || ||||   |||||||||||| |||||||||||    
T  28097551 ggccggagttattcttcttggtggagggaggtggcgaggattagggatgggggcggtgttgttggtggaggctagtttggggagt 28097635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 135 - 322
Target Start/End: Original strand, 30110434 - 30110620
Alignment:
Q  135 tagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtg 234  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| ||| ||    
T  30110434 tagttgataggagtggcttttggtatcgagtcttagtcgcccgttatggcgaagtaggtgggaggttggaggttgggg-ctggagttgttcttcttgatg 30110532  T
Q  235 gagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggt 322  Q
    |||||||||||||| |||||| || ||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30110533 gagggaggtagggcagattagagatgggagaggtgttattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggt 30110620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 10710596 - 10710782
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||||||||||||||| |||||||||||      |||||||||||||||||||        |||||||||||||||||||||||| || || |    
T  10710596 cataggaaaatatcttggataggatggcatgatgt------tcacagggagtttggaggt--------gagacggttgaaagaatttaatttagccttat 10710681  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| | ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10710682 taggaatgtggtgttggaggatgctagttgataggagtggtttttggtatcgagtcttagtcgcccgttatggcgaagtaggtgggaggttggaggttgg 10710781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 25504379 - 25504626
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||||||||||||||||||||||||     ||| || || || | |||||||||||| || ||||| |||| |||||  || |||||| | || ||      
T  25504379 cataggaaaatatcttggataggttggagctctgtttgtctccagaaggagtttggagggttaggggttagacagttgatggagtttaatattgccttac 25504478  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| || || |||||||||||| |||| |||||| |||| |||||| || |||| ||||||||||||| |||||| ||  |||||||||||||||||||    
T  25504479 tagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggttgg 25504578  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||| ||||||||||| ||||||| ||||||| |||  |||||||||    
T  25504579 gggccagagttgttcttcttggtggcgggaggttgggaagattaggga 25504626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 58 - 255
Target Start/End: Complemental strand, 39430985 - 39430788
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagt-ggcttttg 156  Q
    ||||| |||||| || ||||| ||  ||||||  || |||||||  ||||||||||||||||| |||||||||||| | || ||||| ||| || || ||    
T  39430985 ggagtctggagggttaggggttaggaggttgagggagtttaattgtgctttgttaggtaagtggtgttggaggatgttggtagatag-agtagggttgtg 39430887  T
Q  157 gcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    | || | ||  |||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  39430886 gtatagtgttctagtcgcccgttatggcgaggttggtgggaggttggaggttgggggccggagttgttcttattggtggagggaggtggggaggattag 39430788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 7396107 - 7396298
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||| | |||||||||||||||| ||||||| || || | ||||| |||||| ||| |||| |||| |||||  || |||||||  ||||| |    
T  7396107 cataggaaaatcttttggataggttggcataatgtgtgtctgcataaggagtatggagggttgagggttagacagttgagggagtttaattatgcttttt 7396206  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttg 202  Q
    |||| | ||| |||||||||||| | ||||||| | |||| |||||  || |||| ||||||||||| | ||||||||||||||||||||||    
T  7396207 taggcatgtggtgttggaggatgttggttgatatgggtggtttttgatatagagttttagtcgcccgctatggcgaagtaggtgggaggttg 7396298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 10710773 - 10710857
Alignment:
Q  238 ggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggt 322  Q
    |||||| ||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  10710773 ggaggttgggcggattagagacgggggaggtgatattggtggaggctggtttgcggagtgtgtgtctaagaagttggggaatggt 10710857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 49264506 - 49264593
Alignment:
Q  168 tagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    |||||||||||| |||||| || || |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  49264506 tagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttcttattggtggagggaggtggggaggattag 49264593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 20796238 - 20796179
Alignment:
Q  196 gaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  20796238 gaggttggaggttgggggccggagttgttcttattggtggagggaggtggggaggattag 20796179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 220
Target Start/End: Original strand, 32352742 - 32352904
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    ||||| ||| ||||||||||||||    ||||| || |||||||| ||||||||||| || || |||||| ||||| | || |||||  |||| || |||    
T  32352742 ggagtatggcggtttgggggtgaggaaattgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggtggatagaggtggtttgtgg 32352841  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagt 220  Q
     || | || ||||||||  | | ||||||| ||||||| ||||||||||||||||||||||||    
T  32352842 tatagggttttagtcgctaggtatggcgaattaggtggcaggttggaggttgggggccggagt 32352904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 48072891 - 48073025
Alignment:
Q  86 ttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcg 185  Q
    ||||| || |||||||| ||||||||||| || || |||||| ||||| | || |||||  |||| || ||| |||| || ||||||| | | | |||||    
T  48072891 ttgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggtggatagaggtggtttgtggtatcgggttttagtcgacaggtatggcg 48072990  T
Q  186 aagtaggtgggaggttggaggttgggggccggagt 220  Q
    || ||||||| ||||||||||||||||||||||||    
T  48072991 aattaggtggcaggttggaggttgggggccggagt 48073025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 33142652 - 33142731
Alignment:
Q  65 ggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgatag 144  Q
    ||||| |||||||||||  || ||| |||||||||||||||| | |||||||| || ||||||||| || ||||||||||    
T  33142652 ggaggattgggggtgaggaggatgagagaatttaatttggctctcttaggtaaatggtgttggaggttgttagttgatag 33142731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 17827863 - 17827811
Alignment:
Q  203 gaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||| |||||| | |||||||||| ||||||||||||||||||| |||||||    
T  17827863 gaggtagggggctgaagttgttcttattggtggagggaggtagggaggattag 17827811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 47106343 - 47106379
Alignment:
Q  286 gtttggggagtgtgtgtctaagaagttgggggatggt 322  Q
    ||||||||||||||||| |||||||||||||||||||    
T  47106343 gtttggggagtgtgtgtttaagaagttgggggatggt 47106379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 20796365 - 20796290
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatg 133  Q
    ||||| |||||| |||||||| ||  ||||||  || |||||||| |||||||||||||| || ||||||||||||    
T  20796365 ggagtctggaggattgggggttaggaggttgagggagtttaattttgctttgttaggtaaatggtgttggaggatg 20796290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 20987734 - 20987671
Alignment:
Q  195 ggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||| |||||| ||||| ||||| |||||||||||||| ||| |  |||||||||    
T  20987734 ggaggttggaggtagggggcaggagtggttctctttggtggagggagatagcgaagattaggga 20987671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 41457012 - 41456970
Alignment:
Q  92 gaatttaatttggctttgttaggtaagtgttgttggaggatgc 134  Q
    ||||||||||||||||||||||  ||||| |||||||||||||    
T  41457012 gaatttaatttggctttgttagaaaagtggtgttggaggatgc 41456970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 6051169 - 6051128
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  6051169 ttggaggatgggggccggagttgttcttcgtggtggagggag 6051128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 19014552 - 19014615
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||||||||| |||||||  ||||| ||||||||||||| ||| |  |||||||||    
T  19014552 gggaggttggaggttgggg-ccggagtgtttcttcttggtggagggagatagtgaagattaggga 19014615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 28358462 - 28358398
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    |||||||||||||||||||||||||||   || | |||||||||||| |||| |  |||||||||    
T  28358462 gggaggttggaggttgggggccggagtgtctcatcttggtggagggaagtagcgaagattaggga 28358398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 33260162 - 33260210
Alignment:
Q  95 tttaatttggctttgttaggtaagtgttgttggaggatgctagttgata 143  Q
    ||||||||||| |||||||| ||||| |||||||||||| |||| ||||    
T  33260162 tttaatttggcgttgttagggaagtggtgttggaggatggtagtggata 33260210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 33280321 - 33280369
Alignment:
Q  95 tttaatttggctttgttaggtaagtgttgttggaggatgctagttgata 143  Q
    ||||||||||| |||||||| ||||| |||||||||||| |||| ||||    
T  33280321 tttaatttggcgttgttagggaagtggtgttggaggatggtagtggata 33280369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 35541614 - 35541574
Alignment:
Q  201 tggaggttgggggccggagttgttctttttggtggagggag 241  Q
    |||||| ||||||||||||||||||||  ||||||||||||    
T  35541614 tggaggatgggggccggagttgttcttcgtggtggagggag 35541574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 43943920 - 43943996
Alignment:
Q  68 ggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgatag 144  Q
    ||||||||||||||   | ||| | |||||||||| ||  |||| |||||||| |||||||||||| ||||||||||    
T  43943920 ggtttgggggtgaggaagatgatataatttaatttagcactgttgggtaagtggtgttggaggatgttagttgatag 43943996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 207; Significance: 1e-113; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 12 - 322
Target Start/End: Complemental strand, 8286 - 7976
Alignment:
Q  12 ataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgtt 111  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || ||||||||||||||    
T  8286 ataggaaaatatcttggataggttgccttgatgtgtgccttcacagggagtttggtggtttgggggtgagacagttgagagagttcaatttggctttgtt 8187  T
Q  112 aggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttggg 211  Q
    ||  ||||| |||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  8186 agaaaagtggtgttggaggatgatagtagataggagtggtttttggtatcgagtcttagtcgcccgttatgacgaagtaggtgggaggttggaggttggg 8087  T
Q  212 ggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagt 311  Q
    |||||||||||||| | ||||||||||||||| ||||||||||| || || ||||||||  ||||||| ||||| |||||||||||||||||||||||||    
T  8086 ggccggagttgttcgtcttggtggagggaggtggggcggattagagatgggggaggtgatgttggtggtggctgatttggggagtgtgtgtctaagaagt 7987  T
Q  312 tgggggatggt 322  Q
    |||||||||||    
T  7986 tgggggatggt 7976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 12 - 322
Target Start/End: Complemental strand, 13220 - 12910
Alignment:
Q  12 ataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgtt 111  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || ||||||||||||||    
T  13220 ataggaaaatatcttggataggttgccttgatgtgtgccttcacagggagtttggtggtttgggggtgagacagttgagagagttcaatttggctttgtt 13121  T
Q  112 aggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttggg 211  Q
    ||  ||||| |||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  13120 agaaaagtggtgttggaggatgatagtagataggagtggtttttggtatcgagtcttagtcgcccgttatgacgaagtaggtgggaggttggaggttggg 13021  T
Q  212 ggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagt 311  Q
    |||||||||||||| | ||||||||||||||| ||||||||||| || || ||||||||  ||||||| ||||| |||||||||||||||||||||||||    
T  13020 ggccggagttgttcgtcttggtggagggaggtggggcggattagagatgggggaggtgatgttggtggtggctgatttggggagtgtgtgtctaagaagt 12921  T
Q  312 tgggggatggt 322  Q
    |||||||||||    
T  12920 tgggggatggt 12910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 35 - 322
Target Start/End: Complemental strand, 1380812 - 1380526
Alignment:
Q  35 tggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgc 134  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||  ||||| |||||||||||||    
T  1380812 tggcatga-gtgtgccttcatagggagtttggaggtttgggggtgagacggttgaaagaattcaatttggatttattagaaaagtggtgttggaggatgc 1380714  T
Q  135 tagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtg 234  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  1380713 tagttgataggagtggcttttggtatcgagtcttagtcgcccgttatggcgaagtaggcgggaggttggaggttgggggccggagttgttcttcttggtg 1380614  T
Q  235 gagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggt 322  Q
    ||||||| |||||| |||||| ||||| |||||||| || |||||||| |||||||| |||||||||||||||||||||||| |||||    
T  1380613 gagggagatagggctgattagagacgggggaggtgatataggtggaggttggtttggagagtgtgtgtctaagaagttggggaatggt 1380526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 11028625 - 11028314
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||||||||||||||| |||||| | |||||||| || | |||| |||||||||| |||||||||| |||||| || ||||||  ||||||||    
T  11028625 cataggaaaatatcttggatagggtggcataacgtgtgcctccataaggagcttggaggtttaggggtgagacagttgaaggagtttaatcaggctttgt 11028526  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| |||||||||||||| |||||||||||||| || ||| | ||||| |||||||||||||  |||||||||||||| |||||||||| |||    
T  11028525 taggaaagtggtgttggaggatgcttgttgataggagtggtttgtggtaccgagttttagtcgcccgttacggcgaagtaggtggaaggttggaggatgg 11028426  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||| ||||||||||| ||||||||| ||||| | | |||||||||| |  || ||||   |||||||||||||||||||||||| |||||| ||||||    
T  11028425 gggccagagttgttcttcttggtggagagaggtggcgaggattagggatgagggcggtgttgttggtggaggctggtttggggagtctgtgtcgaagaag 11028326  T
Q  311 ttgggggatggt 322  Q
    |||||| |||||    
T  11028325 ttggggcatggt 11028314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 258
Target Start/End: Complemental strand, 15018431 - 15018185
Alignment:
Q  12 ataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgtt 111  Q
    ||||||||||||||||||||| ||||  |  ||| || || || | |||||||||||| ||  |||| |||| |||||| || |||||| | || || ||    
T  15018431 ataggaaaatatcttggatagcttggagttctgtttgtctccaaaaggagtttggagggttatgggttagacagttgaaggagtttaatattgccttatt 15018332  T
Q  112 aggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttggg 211  Q
    ||| || || ||||||||| ||  ||| |||||| |||| |||||| || |||| |||||||| |||| |||||||||| ||||||||||||||||||||    
T  15018331 agggaaatggtgttggaggttgtcagtggataggggtggattttggtatagagttttagtcgctcgttatggcgaagtatgtgggaggttggaggttggg 15018232  T
Q  212 ggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||| |||||||||| ||||||| ||||||||||| ||||||||||    
T  15018231 ggccgaagttgttcttcttggtggcgggaggtagggaggattaggga 15018185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 246
Target Start/End: Original strand, 28399982 - 28400170
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    ||||||||||||||||||||| || || ||||| || |||||| | |||||  ||||||| || |||||||||||| |||| |||||    ||  | |||    
T  28399982 ggagtttggaggtttgggggttaggcgattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagtcgatagagaagggatgtgg 28400081  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
     |||  || |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||  |||||| |||||| ||||||||||    
T  28400082 tatcaggttttagtcgctcgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtagg 28400170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 9668548 - 9668635
Alignment:
Q  168 tagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    |||||||||||| |||||| || || |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  9668548 tagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttcttattggtggagggaggtggggaggattag 9668635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 64 - 246
Target Start/End: Complemental strand, 35488539 - 35488357
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||||||| ||   |||||| || |||||| | |||||  ||||||| || ||||||||| || ||||||||||    || || ||| |||      
T  35488539 tggaggtttgggggttaggaagttgaaggagtttaatgttgctttactaggtaaatggtgttggaggttgttagttgatagagaagggttgtggtatcat 35488440  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
    || ||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| ||||||  |||||| ||||||||||    
T  35488439 gttttagtcgcccgttatggcgaagtaggtgggaggttggaggtggggggccgaagtggttcttcgtggtggcgggaggtagg 35488357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 45422222 - 45422043
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    |||||||||||||||||||| |||||| |||||||||   |||||||||||||| || |||||| ||||| | || || |   |||| || ||| || |     
T  45422222 tggaggtttgggggtgagacagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggacaaaggtggtttgtggtatagt 45422123  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||| ||| | | ||||||| ||||||| ||||||||||||||||| ||||||   || | |||||||||||||||    
T  45422122 gtcttagttgccaggtatggcgaattaggtggcaggttggaggttgggggtcggagtgtgtcgtgttggtggagggaggt 45422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 22724824 - 22725040
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||| |||||||||||||||||||   |   || | |||||| | |||||| |||||||||| ||| |  | |||||| ||||||||| | || ||      
T  22724824 cataggtaaatatcttggataggttgaagttcagttttccttcaaaaggagttcggaggtttggaggttaagcagttgaaggaatttaatgttgccttac 22724923  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| || || |||||||||||| |||| |||||| |||| |||||| ||  ||   |||||||||  | |||||| ||||| ||||||||||||| |||    
T  22724924 taggaaaatggtgttggaggatgttagtggataggggtggtttttggtataaagatatagtcgcccactatggcgaggtaggcgggaggttggaggatgg 22725023  T
Q  211 gggccggagttgttctt 227  Q
    |||||||||||||||||    
T  22725024 gggccggagttgttctt 22725040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 11234049 - 11234108
Alignment:
Q  196 gaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  11234049 gaggttggaggttgggggccggagttgttcttattggtgaagggaggtagggaggattag 11234108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 25380779 - 25381015
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||||| |||||| || |||  |  ||| |||||||| | ||||| |||||| ||| |||| |||| |||||| ||||||||| | || || |    
T  25380779 cataggaaaatatattggattggatggactagtgtttgccttcaaaaggagtatggagggttgagggttagacagttgaaggaatttaatgttgccttat 25380878  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |  | || || || | ||||||  |||| |||||| |||| |||||| || || | ||||||||||||| |||||| |||||||||||       |||||    
T  25380879 tgtggaaatggtgctagaggatattagtggataggggtggtttttggtatagaattttagtcgcccgttatggcgaggtaggtgggag-------gttgg 25380971  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggatta 254  Q
    ||||| |||||||||||  |||||||||||||| ||| ||||||    
T  25380972 gggccagagttgttcttcgtggtggagggaggtggggaggatta 25381015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 2207390 - 2207451
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||||||||||| |||||||||| || ||||||||||||||| |||||| ||| |||||||    
T  2207390 gggaggttggaggatgggggccggggtggttctttttggtggaaggaggttgggaggattag 2207451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 29895261 - 29895302
Alignment:
Q  92 gaatttaatttggctttgttaggtaagtgttgttggaggatg 133  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  29895261 gaatttaatttggctttgttaggtaagtggtgttggaggatg 29895302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 288
Target Start/End: Complemental strand, 16213777 - 16213663
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtggag 266  Q
    ||||||||||||| |||||||||||||||||||| ||       ||||||||||  |||||| |||||| ||||||||||  ||||| | || ||||  |    
T  16213777 ttagtcgcccgttatggcgaagtaggtgggaggtggg-------gggccggagtgtttctttgtggtggtgggaggtaggtaggattcgtgatggtgtcg 16213685  T
Q  267 gtgacattggtggaggctggtt 288  Q
    ||||||| |||||||| |||||    
T  16213684 gtgacataggtggagggtggtt 16213663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 28253286 - 28253231
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||||| |||||||||||||||||||| ||||||||||||| ||| | |||||||    
T  28253286 ttggaggatgggggccggagttgttcttcttggtggagggagatagtgaggattag 28253231  T

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Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 13416244 - 13416194
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||| ||||||    
T  13416244 tgggaggttggaggatgggggccggagtggttctatttggtggaaggaggt 13416194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 43310832 - 43310790
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtgg 235  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  43310832 tgggaggttggaggttgggggccggagtggttcttcttggtgg 43310790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 26894153 - 26894206
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagt 220  Q
    ||||||||| | | ||||||| ||||||| ||||||||||||||||||||||||    
T  26894153 ttagtcgccaggtatggcgaaataggtggcaggttggaggttgggggccggagt 26894206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 26899592 - 26899645
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagt 220  Q
    ||||||||| | | ||||||| ||||||| ||||||||||||||||||||||||    
T  26899592 ttagtcgccaggtatggcgaaataggtggcaggttggaggttgggggccggagt 26899645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 6727345 - 6727393
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||| ||||    
T  6727345 tgggaggttggaggatgggggccggagtggttctatttggtggaaggag 6727393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 12646101 - 12646061
Alignment:
Q  201 tggaggttgggggccggagttgttctttttggtggagggag 241  Q
    |||||| |||||||||||||||||||| |||||||||||||    
T  12646101 tggaggatgggggccggagttgttcttcttggtggagggag 12646061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 26146788 - 26146746
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtgg 235  Q
    |||||||||||||||||||||||||||| ||| || |||||||    
T  26146788 tgggaggttggaggttgggggccggagtggttattcttggtgg 26146746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 37445664 - 37445618
Alignment:
Q  195 ggaggttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    |||||||||||| ||||||||||||||||||||  |||||| |||||    
T  37445664 ggaggttggaggatgggggccggagttgttcttcgtggtggtgggag 37445618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 44028652 - 44028738
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgatag 144  Q
    ||||| |||||||||||| || |||| |||||| || ||||||  ||| ||| |||||||||| || ||||||||| |||| |||||    
T  44028652 ggagtatggaggtttgggtgttagacagttgaaggagtttaatgaggcgttgctaggtaagtggtgctggaggatgttagtggatag 44028738  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 14440310 - 14440269
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  14440310 ttggaggatgggggccggagttgttcttcgtggtggagggag 14440269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 34232447 - 34232143
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||| |    
T  34232447 cataggaaaatatcttggataggttggcatgatgtgtgccttcatagggagtttggaggtttgggggtgcgtcggttgaaagaatttaatttggctttat 34232348  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||||| ||||| ||||| |||||||||||||       ||||    
T  34232347 tagggaagtggtgttggaggatgctagttgataggagtggtttttggtatcgagttttagtcgaccgttatggcggagtaggtgggagg-------ttgg 34232255  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || |||| |||    |||||||| |||||||||||||||||||||||||||    
T  34232254 gggccggagttgttcttcttggtggagggaggtagggcggattagagaagggggagatgattcaggtggaggttggtttggggagtgtgtgtctaagaag 34232155  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  34232154 ttgggggatggt 34232143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 11 - 322
Target Start/End: Complemental strand, 4078023 - 4077719
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||| |    
T  4078023 cataggaaaatatcttggatagggtggaataatgtgtgccttcacaaggagtttggaggtttgggggtgagacagttgaaggaatttaatttggctttct 4077924  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| |||||||||||||||||||       ||||    
T  4077923 taggaaagtgatgttggaggatgctagttgataggagtggcttttagtatcgagttttagtcgcccgttatggcgaagtaggtgggagg-------ttgg 4077831  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaag 310  Q
    ||||||||||||||||  ||||||||||||||| || | |||||| || || |||||||| |||||||| ||||||||||||||| ||||||| ||  ||    
T  4077830 gggccggagttgttctacttggtggagggaggtgggtcagattagagatgggggaggtgatattggtggtggctggtttggggagagtgtgtcgaaacag 4077731  T
Q  311 ttgggggatggt 322  Q
    ||||||||||||    
T  4077730 ttgggggatggt 4077719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 45993330 - 45993084
Alignment:
Q  11 cataggaaaatatcttggataggttggcatgatgtgtgccttcacagggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgt 110  Q
    ||||||||||| ||||||||||||||| |   ||| || || || | |||||||||||| || ||||| |||| |||||| || |||||| | || ||      
T  45993330 cataggaaaatgtcttggataggttggaactctgtttgtctccagaaggagtttggagggttaggggttagacagttgaaggagtttaatgttgcattac 45993231  T
Q  111 taggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgg 210  Q
    |||| || || |||||||||||| |||| |||||| |||| |||||| || |||| ||||||||||||| |||||| ||  ||||||||||||||||| |    
T  45993230 tagggaaatggtgttggaggatgttagtggataggggtggtttttggtatagagttttagtcgcccgttatggcgaggtgtgtgggaggttggaggtt-g 45993132  T
Q  211 gggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||||||| ||||||| ||||||| ||| ||||||||||    
T  45993131 gggccggagttgttcttcttggtggcgggaggtggggaggattaggga 45993084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 58 - 288
Target Start/End: Complemental strand, 18768116 - 18767886
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    ||||||||||||||||||||| ||  | ||||| || |||||| | |||||  ||||||| || |||||||||||| ||||||||||    || || |||    
T  18768116 ggagtttggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttggaggatgttagttgatagagaagggttgtgg 18768017  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggg 257  Q
     |||  || |||||| |||||| |||| |||||||||||||||||||||| ||||||||||||  |||||| |||||| ||||||||||  ||||| | |    
T  18768016 tatcaggttttagtctcccgttatggcaaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtaggtaggattcgtg 18767917  T
Q  258 acggtggaggtgacattggtggaggctggtt 288  Q
    | || |  |||||||| |||||||| |||||    
T  18767916 atggcgttggtgacataggtggagggtggtt 18767886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 64 - 288
Target Start/End: Complemental strand, 18671872 - 18671648
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||| ||| ||   |||||| ||||||||| | |||||  ||||||| || |||||||||||| ||||||||||    || || ||| |||      
T  18671872 tggaggtttggtggttaggaagttgaaggaatttaatgttgctttactaggtaaatggtgttggaggatgttagttgatagagcagggttgtggtatcat 18671773  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacggtg 263  Q
    || |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||  |||||  |||||| ||||||||||  ||||| | || ||||    
T  18671772 gttttagtcgctcgttatggcgaagtaggtgggaggttggaggtggggggccggagtgtttcttcatggtggcgggaggtaggtaggattcgtgatggtg 18671673  T
Q  264 gaggtgacattggtggaggctggtt 288  Q
       ||||||| |||||||| |||||    
T  18671672 acagtgacataggtggagggtggtt 18671648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 58 - 255
Target Start/End: Original strand, 13553616 - 13553813
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagt-ggcttttg 156  Q
    ||||| ||| || |||||||| ||  ||||||  || |||||||| |||||||||| ||| || |||||||||||| | || ||||| ||| || || ||    
T  13553616 ggagtctggggggttgggggttaggaggttgagggagtttaattttgctttgttagataaatggtgttggaggatgttggtagatag-agtagggttgtg 13553714  T
Q  157 gcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    | || | ||  |||||||||||| |||||| || || |||||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||||    
T  13553715 gtatagtgttctagtcgcccgttatggcgaggttggagggaggttggaggttgggggccggagttgttctcattggtggagggaggtggggaggattag 13553813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 321
Target Start/End: Original strand, 33795878 - 33796052
Alignment:
Q  147 gtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
    |||| |||||| || |||| |||||||| |||| | |||| ||  ||||||||||||||| ||||||||||||| ||||||  |||||| |||||||| |    
T  33795878 gtggtttttggtatagagttttagtcgctcgttattgcgaggtttgtgggaggttggagggtgggggccggagtggttcttcgtggtggcgggaggtatg 33795977  T
Q  247 gcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatgg 321  Q
    ||| |||||||| || || || |   |||| ||||| ||||||  |||||||||| |||||||  ||||||||||    
T  33795978 gcgaattagggatgggggcggcggtgttggaggaggttggtttcaggagtgtgtgactaagaatgtgggggatgg 33796052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 246
Target Start/End: Original strand, 34457596 - 34457778
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||||||| ||  | ||||| || |||||| | |||||  ||||||| || ||||||  |||| ||||||||||    || || ||| |||      
T  34457596 tggaggtttgggggttaggagattgaaggagtttaatattgctttactaggtaaatggtgttgggtgatgttagttgatagagaagggttgtggtatcag 34457695  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagg 246  Q
    || |||||| |||||| |||| |||||||||||||||||||||| ||||||||||||  |||||| |||||| ||||||||||    
T  34457696 gttttagtcacccgttatggcaaagtaggtgggaggttggaggtggggggccggagtgtttctttgtggtggcgggaggtagg 34457778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 15653146 - 15653322
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||||| |||||| |||||| |||||||||   |||||||||||||| || |||||| ||||| | || || ||  ||||  ||||| || |     
T  15653146 tggaggtttgggg-tgagacagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggacagaggtgg--tttggtatagg 15653242  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||| ||| | | ||||||| ||||||| ||||||||||||||||||||||||   || | |||||||||||||||    
T  15653243 gtcttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtgtcgtgttggtggagggaggt 15653322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 220
Target Start/End: Complemental strand, 46626524 - 46626368
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    ||||||||||||||||||||  ||||| |||||||||   |||||||||||||| || |||||| ||||| |  | || ||  |||| || ||| || |     
T  46626524 tggaggtttgggggtgagacaattgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttgttggacagaggtggtttgtggtatagt 46626425  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagt 220  Q
    |||||||| ||| | | ||||||| ||||||| ||||||||||||||||||||||||    
T  46626424 gtcttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagt 46626368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 13440733 - 13440599
Alignment:
Q  86 ttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcg 185  Q
    ||||| || |||||||| ||||||||||| || || |||||| ||||| | || |||||  |||| || ||| |||| || ||||||||| | | |||||    
T  13440733 ttgaaggagtttaatttagctttgttaggaaaatggtgttggcggatgttggtggatagaggtggtttgtggtatcgggttttagtcgccaggtatggcg 13440634  T
Q  186 aagtaggtgggaggttggaggttgggggccggagt 220  Q
    || ||||||| ||||||||||||||||||||||||    
T  13440633 aattaggtggcaggttggaggttgggggccggagt 13440599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 36227692 - 36227759
Alignment:
Q  168 tagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtgg 235  Q
    ||||||| || | ||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||    
T  36227692 tagtcgcgcggtatggcgaagtaggtgggaggttggaggtggggggccggagtgattcttcttggtgg 36227759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 11341368 - 11341325
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggag 237  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  11341368 gggaggttggaggtcgggggccggagttgttccttttggtggag 11341325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 143
Target Start/End: Original strand, 32482455 - 32482526
Alignment:
Q  72 tgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgata 143  Q
    ||||||||||  |||||| |||||||||||||||| | ||||| ||||| |||||||||||| |||| ||||    
T  32482455 tgggggtgaggaggttgagagaatttaatttggctctattagggaagtggtgttggaggatgttagtagata 32482526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 12308690 - 12308732
Alignment:
Q  201 tggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  12308690 tggaggttgggggccggagtggttcttattggtggagggaggt 12308732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 17504126 - 17504176
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||| ||||||    
T  17504126 tgggaggttggaggatgggggccggagtggttctttgtggtggaaggaggt 17504176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 17549088 - 17549038
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| ||||||||||||| ||||||| ||||||| ||||||    
T  17549088 tgggaggttggaggatgggggccggagtggttctttgtggtggaaggaggt 17549038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 45165126 - 45165176
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||| ||||||    
T  45165126 tgggaggttggaggatggaggccggagtggttctttttggtggaaggaggt 45165176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 5327362 - 5327281
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggagg-ttgggggccggagttgttctttttggtggagggaggtaggg 247  Q
    ||||||||||| | |||||| ||||||||||||||||||| | ||||| | |||| |||||| |||||||  ||||||||||    
T  5327362 ttagtcgcccgatatggcgaggtaggtgggaggttggaggctggggggacagagtggttcttattggtggcaggaggtaggg 5327281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 19544972 - 19545036
Alignment:
Q  196 gaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattagggacg 260  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||  ||| |  |||||||||||    
T  19544972 gaggttggaggttgggggccggagtggttctttgtggtggaaggatctagtgaagattagggacg 19545036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 23887790 - 23887714
Alignment:
Q  59 gagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgct 135  Q
    ||||||||||| |||||||| |||| |||||  || |||||| | ||||||||||| || || ||||||||||||||    
T  23887790 gagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttaggaaaatggtgttggaggatgct 23887714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 23898966 - 23898890
Alignment:
Q  59 gagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgct 135  Q
    ||||||||||| |||||||| |||| |||||  || |||||| | ||||||||||| || || ||||||||||||||    
T  23898966 gagtttggagggttgggggtcagacagttgagggagtttaatatagctttgttaggaaaatggtgttggaggatgct 23898890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 39931163 - 39931211
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    |||| ||||||||| |||||||||||||||||||| ||||||| |||||    
T  39931163 tgggcggttggaggatgggggccggagttgttcttgttggtggtgggag 39931211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 235012 - 235067
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| | |||||||    
T  235012 ttggaggatgggggccggagttgttcttcgtggtggagggagatagtgaggattag 235067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 17721201 - 17721146
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    ||||||| ||||||||||||||||||||  |||||||||||| ||| | |||||||    
T  17721201 ttggaggatgggggccggagttgttcttcatggtggagggagatagtgaggattag 17721146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 23887655 - 23887592
Alignment:
Q  195 ggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||| ||| |  |||||||||    
T  23887655 ggaggttggaggttgggggtcggagtgtttcttcttggtggagggagatagcgaagattaggga 23887592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 23898831 - 23898768
Alignment:
Q  195 ggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattaggga 258  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||| ||| |  |||||||||    
T  23898831 ggaggttggaggttgggggtcggagtgtttcttcttggtggagggagatagcgaagattaggga 23898768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 243
Target Start/End: Original strand, 6335971 - 6336021
Alignment:
Q  193 tgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    |||||||||||||| |||||||| |||| ||||| ||||||||| ||||||    
T  6335971 tgggaggttggaggatgggggccagagtggttctatttggtggacggaggt 6336021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 22819286 - 22819336
Alignment:
Q  195 ggaggttggaggttgggggccggagttgttctttttggtggagggaggtag 245  Q
    ||||||||| ||||||||||||||||  |||||| ||||||| ||||||||    
T  22819286 ggaggttggcggttgggggccggagtgtttctttgtggtggaaggaggtag 22819336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 4937702 - 4937743
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  4937702 ttggaggatgggggccggagttgttcttcgtggtggagggag 4937743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 41340132 - 41340091
Alignment:
Q  167 ttagtcgcccgttttggcgaagtaggtgggaggttggaggtt 208  Q
    ||||||||||| | |||||| |||||||||||||||||||||    
T  41340132 ttagtcgcccgatatggcgaggtaggtgggaggttggaggtt 41340091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 12308591 - 12308643
Alignment:
Q  95 tttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggag 147  Q
    |||| |||| || |||| || ||||| ||||||||||||||||||||||||||    
T  12308591 tttattttgtctctgttgggaaagtggtgttggaggatgctagttgataggag 12308643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 17856305 - 17856249
Alignment:
Q  197 aggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
    |||| |||||| |||| |||||||||||||| ||||||| | ||||||||| |||||    
T  17856305 aggtgggaggtgggggtccggagttgttcttcttggtggcgagaggtagggaggatt 17856249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0912 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0912
Description:

Target: scaffold0912; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 129 - 322
Target Start/End: Original strand, 2376 - 2569
Alignment:
Q  129 ggatgctagttgataggagtggcttttggcatcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttcttt 228  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||     
T  2376 ggatgctagttgataggagtgtgttttggtatcgagtcttagtcgcccgttatggcgaagtgggtgggaggttggaggttgggggccggagttgttcttc 2475  T
Q  229 ttggtggagggaggtagggcggattagggacggtggaggtgacattggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggt 322  Q
    ||||||| ||||||||||||||||||| || || ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2476 ttggtggcgggaggtagggcggattagagatgggggaggtgattatggtggaggctggtttggggagtgtgtgtctaagaagttgggggatggt 2569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 253
Target Start/End: Complemental strand, 17853 - 17658
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    |||||||||||| |||||||| ||   |||||| || |||||| | || ||| |||| || || |||||| ||||| |||| |||||    || || |||    
T  17853 ggagtttggagggttgggggtcaggaagttgaaggagtttaatgttgcattgctagggaaatggtgttggtggatgttagtggatagagaaggattgtgg 17754  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggtagggcggatt 253  Q
     |||  || ||||||||||||| ||||||| ||||||||||||||||||| ||| || |||||||||||| ||||||| ||||||||||| |||||    
T  17753 tatcatgttttagtcgcccgttatggcgaaataggtgggaggttggaggtggggagctggagttgttcttcttggtggcgggaggtagggaggatt 17658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 327567 - 327752
Alignment:
Q  58 ggagtttggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttgg 157  Q
    ||||| |||||||||||||||||||| |||||| || ||||||   ||||||||||| || || |||||| ||||| | || |||||   ||| || |||    
T  327567 ggagtatggaggtttgggggtgagacagttgaaggagtttaatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtgg 327666  T
Q  158 catcgagtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
     || | || ||||| ||| | | ||||||| ||||||| ||||||||||||||||||||||||  ||| | |||||||||||||||    
T  327667 tatagggttttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcatgttggtggagggaggt 327752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 312120 - 312298
Alignment:
Q  65 ggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgag 164  Q
    ||||||||||||||||||| |||||| || ||||||   ||||||||||| || || |||||| ||||| | || |||||   ||| || ||| || | |    
T  312120 ggaggtttgggggtgagacagttgaaggagtttaatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtataggg 312219  T
Q  165 tcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    | ||||| ||| | | ||||||| ||||||| ||||||||||||||||||||||||  ||| | |||||||||||||||    
T  312220 ttttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcatgttggtggagggaggt 312298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 134293 - 134471
Alignment:
Q  65 ggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcgag 164  Q
    ||||||||||||||||||| |||||| || ||||||   ||||||||||| || || |||||| ||||| | || |||||   ||| || ||| || | |    
T  134293 ggaggtttgggggtgagacagttgaaggagtttaatagtgctttgttagggaaatggtgttggcggatgttggtggatagagatggtttgtggtataggg 134392  T
Q  165 tcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtggagggaggt 243  Q
    | ||||| ||| | | ||||||| ||||||| ||||||||||||||||||||||||  ||| | |||||||||||||||    
T  134393 ttttagttgccaggtatggcgaattaggtggcaggttggaggttgggggccggagtgtttcatgttggtggagggaggt 134471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 220
Target Start/End: Complemental strand, 8306 - 8150
Alignment:
Q  64 tggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgataggagtggcttttggcatcga 163  Q
    |||||||||||||||||||| |||||| |||||||||   |||||||||||||| || |||||| ||||| | || || ||  |||| || ||| || |     
T  8306 tggaggtttgggggtgagacagttgaaggaatttaatagtgctttgttaggtaaatggtgttggcggatgttggtggacagaggtggtttgtggtatagt 8207  T
Q  164 gtcttagtcgcccgttttggcgaagtaggtgggaggttggaggttgggggccggagt 220  Q
    |||||||| ||  | | ||||||| ||||||| || |||||||||||||||||||||    
T  8206 gtcttagttgctaggtatggcgaattaggtggcagattggaggttgggggccggagt 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 36205 - 36126
Alignment:
Q  65 ggaggtttgggggtgagacggttgaaagaatttaatttggctttgttaggtaagtgttgttggaggatgctagttgatag 144  Q
    |||||||||||||||||| |  |||||||||||||||||||| | ||||| || || |||||||||||| |||| |||||    
T  36205 ggaggtttgggggtgagaagaatgaaagaatttaatttggctctcttaggaaaatggtgttggaggatgatagtagatag 36126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 15203 - 15259
Alignment:
Q  179 tttggcgaagtaggtgggaggttggaggttgggggccggagttgttctttttggtgg 235  Q
    |||||||||||||||||||||  |||||| ||||||||||||  ||||| |||||||    
T  15203 tttggcgaagtaggtgggaggaaggaggtggggggccggagtgtttcttcttggtgg 15259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 3818 - 3763
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggaggtagggcggattag 255  Q
    |||||||||||||||||||||||||| |  |||||||||||| ||| | |||||||    
T  3818 ttggaggttgggggccggagttgttcgtcgtggtggagggagatagtgaggattag 3763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 67652 - 67606
Alignment:
Q  194 gggaggttggaggttgggggccggagttgttctttttggtggaggga 240  Q
    ||||||||||||||||||||| ||||| |||||| ||||||| ||||    
T  67652 gggaggttggaggttgggggctggagtggttcttcttggtggtggga 67606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 105417 - 105458
Alignment:
Q  200 ttggaggttgggggccggagttgttctttttggtggagggag 241  Q
    ||||||| ||||||||||||||||||||  ||||||||||||    
T  105417 ttggaggatgggggccggagttgttcttcgtggtggagggag 105458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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