View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5629_low_46 (Length: 258)
Name: NF5629_low_46
Description: NF5629
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5629_low_46 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 14 - 233
Target Start/End: Complemental strand, 10324386 - 10324167
Alignment:
| Q |
14 |
catagggggtcaaaactgtatttaagtcatataagaattgagttggtgcttttaatttttatacacgcaattcatatgaatactgagttagacaattaca |
113 |
Q |
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| T |
10324386 |
catagggggtcaaaactgtatttaagtcatataagaattgagttggtgcttttaatttttatacacgcaattcatatgaatactgagttagacaattaca |
10324287 |
T |
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| Q |
114 |
cacagaattagcaaatgttgtagatcaagaccttttaaagttctaacgtacgatgtaaaggagtcgtaaattgtagataaagaccttttttaaagaccaa |
213 |
Q |
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|| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10324286 |
caaagaattagcaaaagttgtagatcaagaccttttaaagttctaacatacgatgtaaaggagtcgtaaattgtagataaagaccttttttaaagaccaa |
10324187 |
T |
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| Q |
214 |
gaacttttgattcactaaac |
233 |
Q |
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|||||||||||||||||||| |
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| T |
10324186 |
gaacttttgattcactaaac |
10324167 |
T |
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