View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5630_high_13 (Length: 228)
Name: NF5630_high_13
Description: NF5630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5630_high_13 |
 | |
|
| [»] chr6 (43 HSPs) |
| |
|
| [»] chr4 (5 HSPs) |
| |
|
| [»] chr8 (2 HSPs) |
| |
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| [»] chr1 (3 HSPs) |
| |
|
| [»] scaffold0349 (3 HSPs) |
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| [»] scaffold0277 (2 HSPs) |
| |
|
| [»] scaffold1254 (1 HSPs) |
| |
|
| [»] scaffold0419 (1 HSPs) |
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|
| [»] scaffold0038 (4 HSPs) |
| | |
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| [»] scaffold0019 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 43)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 26622823 - 26623050
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||| || ||||||||||||||| ||||| | ||| ||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
26622823 |
caatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatc |
26622922 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| || ||||| || || |
|
|
| T |
26622923 |
tctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcga |
26623022 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
26623023 |
agagtctaggatttttattcctgtgttt |
26623050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 26728801 - 26729028
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||| || ||||||||||||||| ||||| | ||| ||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
26728801 |
caatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatc |
26728900 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| || ||||| || || |
|
|
| T |
26728901 |
tctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcga |
26729000 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
26729001 |
agagtctaggatttttattcctgtgttt |
26729028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 31284135 - 31284362
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || ||||||||||||||||||||| | ||| || |||||||||||||| || |||||||| || |||| |
|
|
| T |
31284135 |
caatcatcttcctcttcctcttcaatttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatc |
31284234 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||| ||||||||||| |
|
|
| T |
31284235 |
tctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattga |
31284334 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||||||||| || |||||| |
|
|
| T |
31284335 |
agagtctaggatttttatccccgtgttt |
31284362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 26861463 - 26861690
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||| |||||||||||| |||||| || ||||||||||||| |||||||||| ||| ||||||||||||||||| || ||||| || || |||| |
|
|
| T |
26861463 |
caatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggttttaccggtaatc |
26861562 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||||| |
|
|
| T |
26861563 |
tctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaatgccattga |
26861662 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||||||||| ||||| |||||||||||| |
|
|
| T |
26861663 |
agagtctagaattttcattcctgtgttt |
26861690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 27593360 - 27593133
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagatt-caaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaat |
99 |
Q |
| |
|
|||||||||||||||||| ||||||||||| || |||| |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| || ||| |
|
|
| T |
27593360 |
caatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaat |
27593262 |
T |
|
| Q |
100 |
ctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattg |
199 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||| ||||||||| ||||||||| || ||||||| |
|
|
| T |
27593261 |
ctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattg |
27593162 |
T |
|
| Q |
200 |
aagagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
27593161 |
aagagtctaggatttttattcctgtgttt |
27593133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 27677954 - 27677727
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||| || | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||| |
|
|
| T |
27677954 |
caatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacggtttcaccggcaatc |
27677855 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
|||||||||||||| | ||||||||||||||||||||||| | | ||||||||||||||| |||||||||| ||||||||| || |||||||| |
|
|
| T |
27677854 |
tctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattga |
27677755 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||||||||||||||||||| |||||||| |
|
|
| T |
27677754 |
agagtctaggatttttattgctgtgttt |
27677727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 27678793 - 27679020
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||| || | |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| || |||| |
|
|
| T |
27678793 |
caatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatc |
27678892 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||||||||||| | || ||||||||||| |||||||||| ||||||||| || |||||||| |
|
|
| T |
27678893 |
tctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattga |
27678992 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
27678993 |
agagtctaggatttttattcctgtgttt |
27679020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 27706742 - 27706515
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| || | |||||||||||||||||||| ||| |||||| |||||||||| ||||||||||| || |||| |
|
|
| T |
27706742 |
caatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatc |
27706643 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||| || | ||||||||||||||||||||||| | | ||||||||||||| | |||||||||| ||||||||| || |||||||| |
|
|
| T |
27706642 |
tctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttctcaaggccattga |
27706543 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
27706542 |
agagtctaggatttttattcctgtgttt |
27706515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 27718719 - 27718492
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| | |||||| |||||| |||||||| ||||||| |||||| || | ||||||||| || |||| || ||||||| |
|
|
| T |
27718719 |
caatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatc |
27718620 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || |||||||| |
|
|
| T |
27718619 |
tctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattga |
27718520 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
27718519 |
tgaatctaggatttttattcctgtgttt |
27718492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 27725185 - 27724958
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || |||||| |||||||| ||||| | |||||| || | ||||||||| ||||||| || ||||||| |
|
|
| T |
27725185 |
caatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatc |
27725086 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || |||||||| |
|
|
| T |
27725085 |
tctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattga |
27724986 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
27724985 |
tgaatctaggatttttattcctgtgttt |
27724958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 28786125 - 28786352
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || |||||| |||||||| ||||||| |||||| || | ||||||||| ||||||| || ||||||| |
|
|
| T |
28786125 |
caatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatc |
28786224 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || ||||| || |
|
|
| T |
28786225 |
tctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcga |
28786324 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
28786325 |
agaatctaggatttttattcctgtgttt |
28786352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 28792246 - 28792473
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || |||||| |||||||| ||||||| |||||| || | ||||||||| ||||||| || ||||||| |
|
|
| T |
28792246 |
caatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatc |
28792345 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || ||||| || |
|
|
| T |
28792346 |
tctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcga |
28792445 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
28792446 |
agaatctaggatttttattcctgtgttt |
28792473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 27698834 - 27698607
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||| ||||| ||||| || |||||| |||||||| ||| ||| |||||| || | ||||||||| ||||||| || ||||||| |
|
|
| T |
27698834 |
caatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatc |
27698735 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || |||||||| |
|
|
| T |
27698734 |
tctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattga |
27698635 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
27698634 |
tgaatctaggatttttattcctgtgttt |
27698607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 8 - 228
Target Start/End: Complemental strand, 27611335 - 27611115
Alignment:
| Q |
8 |
cttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaa |
107 |
Q |
| |
|
|||||||||| |||||| ||||| || |||||| |||||||| ||||||| |||||| || | ||||||||| ||||||| || |||||||||||||| |
|
|
| T |
27611335 |
cttcctcttcttcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaa |
27611236 |
T |
|
| Q |
108 |
ggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtct |
207 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||| ||| |||| |||||| |||||||||| |||||||||| || |||||||| || ||| |
|
|
| T |
27611235 |
ggctcttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatct |
27611136 |
T |
|
| Q |
208 |
aggatttttattcctgtgttt |
228 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
27611135 |
aggatttttattcctgtgttt |
27611115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 26802295 - 26802516
Alignment:
| Q |
7 |
ccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctaca |
106 |
Q |
| |
|
|||||||| ||||||||| |||| || |||||| |||||||| ||||||| |||||| || | ||||||||| |||||||| || || |||||||||| |
|
|
| T |
26802295 |
ccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctaca |
26802394 |
T |
|
| Q |
107 |
aggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtc |
206 |
Q |
| |
|
||||||||| | ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || ||||||||||| || |
|
|
| T |
26802395 |
aggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatc |
26802494 |
T |
|
| Q |
207 |
taggatttttattcctgtgttt |
228 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
26802495 |
tagaatttttattcctgtgttt |
26802516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 26646334 - 26646553
Alignment:
| Q |
9 |
ttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaag |
108 |
Q |
| |
|
|||||||||||||| ||||||| | |||||| ||||| || |||||||| || || || ||||||||||| ||||||| |||||| ||||||||||| |
|
|
| T |
26646334 |
ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag |
26646433 |
T |
|
| Q |
109 |
gctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtcta |
208 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||| |||| ||| | ||||| |||||||||| |||||||||| || ||||||||||| |||| |
|
|
| T |
26646434 |
gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta |
26646533 |
T |
|
| Q |
209 |
ggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
26646534 |
ggatttttattcctgtgttt |
26646553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 228
Target Start/End: Original strand, 26752302 - 26752521
Alignment:
| Q |
9 |
ttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaag |
108 |
Q |
| |
|
|||||||||||||| ||||||| | |||||| ||||| || |||||||| || || || ||||||||||| ||||||| |||||| ||||||||||| |
|
|
| T |
26752302 |
ttcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgacggttttactggacatctctacaag |
26752401 |
T |
|
| Q |
109 |
gctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtcta |
208 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||| |||| ||| | ||||| |||||||||| |||||||||| || ||||||||||| |||| |
|
|
| T |
26752402 |
gctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcactcatcaaggccattgaagaatcta |
26752501 |
T |
|
| Q |
209 |
ggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
26752502 |
ggatttttattcctgtgttt |
26752521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 26884023 - 26884230
Alignment:
| Q |
14 |
cttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctct |
113 |
Q |
| |
|
||||||||||| ||||| || |||||| |||||||| ||||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
26884023 |
cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct |
26884122 |
T |
|
| Q |
114 |
tactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatt |
213 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | | |||| |||||| ||||||| |||||||||| || ||||||||||| ||||| ||| |
|
|
| T |
26884123 |
tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt |
26884222 |
T |
|
| Q |
214 |
tttattcc |
221 |
Q |
| |
|
|||||||| |
|
|
| T |
26884223 |
tttattcc |
26884230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 28780986 - 28781213
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| | ||||| |||||||| ||||||| |||||| || | ||||||||| ||||||| || || |||| |
|
|
| T |
28780986 |
caattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatc |
28781085 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || ||||| || |
|
|
| T |
28781086 |
tctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcga |
28781185 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
28781186 |
agaatctaggatttttattcctgtgttt |
28781213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 37 - 228
Target Start/End: Original strand, 26823723 - 26823914
Alignment:
| Q |
37 |
ttcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactaga-aagggaatccacacc |
135 |
Q |
| |
|
|||||||||||||| || |||| ||||||||| ||||||||| || | || || || |||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
26823723 |
ttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttac-agacaagggaatccacacc |
26823821 |
T |
|
| Q |
136 |
ttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|| ||||||| ||||||||||||||||| ||| ||||| ||| ||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26823822 |
ttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttttattcctgtgttt |
26823914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 27229079 - 27229299
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||| | |||||| |||||||| ||||| | |||||| || | ||||||||| ||||||| || || |||| |
|
|
| T |
27229079 |
caatcaccttcctcttcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatc |
27229178 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| || ||||||| ||||||||||| || |||||||| |
|
|
| T |
27229179 |
tctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattga |
27229278 |
T |
|
| Q |
201 |
agagtctaggatttttattcc |
221 |
Q |
| |
|
|| ||| ||||||||||||| |
|
|
| T |
27229279 |
cgaatctcggatttttattcc |
27229299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26655836 - 26656056
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || | || ||||||||||| ||||||| |||||| || | |||||| || ||||||| || || |||| |
|
|
| T |
26655836 |
caatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatc |
26655935 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||| | ||||||||||| || |||||||||||| ||| |||| ||||| |||||||||| ||||||||||| || |||||||| |
|
|
| T |
26655936 |
tctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattga |
26656035 |
T |
|
| Q |
201 |
agagtctaggatttttattcc |
221 |
Q |
| |
|
||| || |||||||||||||| |
|
|
| T |
26656036 |
agaatccaggatttttattcc |
26656056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26761807 - 26762027
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || | || ||||||||||| ||||||| |||||| || | |||||| || ||||||| || || |||| |
|
|
| T |
26761807 |
caatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatc |
26761906 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||| | ||||||||||| || |||||||||||| ||| |||| ||||| |||||||||| ||||||||||| || |||||||| |
|
|
| T |
26761907 |
tctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattga |
26762006 |
T |
|
| Q |
201 |
agagtctaggatttttattcc |
221 |
Q |
| |
|
||| || |||||||||||||| |
|
|
| T |
26762007 |
agaatccaggatttttattcc |
26762027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 43 - 221
Target Start/End: Complemental strand, 27531495 - 27531317
Alignment:
| Q |
43 |
taccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattg |
142 |
Q |
| |
|
|||||||| ||||||| |||||| || |||||||| ||||||| || |||||||||||||||||||||||| ||||||||| | |||||||||| |
|
|
| T |
27531495 |
taccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctataccttcattg |
27531396 |
T |
|
| Q |
143 |
atgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
||||| ||| ||||||||||| |||||||||| ||||||||| |||||||||||||| | ||||||||||||||||| |
|
|
| T |
27531395 |
atgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcc |
27531317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 27338405 - 27338185
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||| | | ||||||||||| || ||||||| |||||| | | |||||||| |||||||| || || |||| |
|
|
| T |
27338405 |
caatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaatc |
27338306 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||| | ||||||||| | ||||||||||||||| || ||| ||||||| ||||||| || ||||||||| | || |||||||| |
|
|
| T |
27338305 |
tctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattga |
27338206 |
T |
|
| Q |
201 |
agagtctaggatttttattcc |
221 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
27338205 |
agagtctaggattttgattcc |
27338185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 27399145 - 27398925
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||| | | ||||||||||| || ||||||| |||||| | | |||||||| |||||||| || || |||| |
|
|
| T |
27399145 |
caatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaatc |
27399046 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||| | ||||||||| | ||||||||||||||| || ||| ||||||| ||||||| || ||||||||| | || |||||||| |
|
|
| T |
27399045 |
tctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattga |
27398946 |
T |
|
| Q |
201 |
agagtctaggatttttattcc |
221 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
27398945 |
agagtctaggattttgattcc |
27398925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 228
Target Start/End: Complemental strand, 27605036 - 27604818
Alignment:
| Q |
10 |
tcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaagg |
109 |
Q |
| |
|
||||| ||||||||| ||||| || ||||| |||||||| ||||| | |||||| || | |||||||||||||||||| || || ||||||||||||| |
|
|
| T |
27605036 |
tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg |
27604937 |
T |
|
| Q |
110 |
ctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctag |
209 |
Q |
| |
|
|||||||| |||||||| || |||||||||||||| ||| |||| |||||| |||||||||| |||| |||| || |||||||| || || || |
|
|
| T |
27604936 |
ctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccag |
27604837 |
T |
|
| Q |
210 |
gatttttattcctgtgttt |
228 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
27604836 |
gatttttattcctgtgttt |
27604818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 28242710 - 28242874
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| ||||||||||| || ||||| ||||||||||||||||| | |||| || |||||||| | |||||||||||||||| | ||||||| | |
|
|
| T |
28242710 |
ttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttcca |
28242809 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgt |
224 |
Q |
| |
|
||||||| |||| | ||||||||| || ||||||||||||||||||||||| |||||||| |
|
|
| T |
28242810 |
ggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgt |
28242874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 28234470 - 28234634
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| ||||||||||| || ||||| || | ||||||||| | |||||| | ||||||||||||||||||||||||||| | || |||||| |
|
|
| T |
28234470 |
ttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaa |
28234569 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgt |
224 |
Q |
| |
|
|||| |||||||| | ||||||||| || ||||||||||||||||||||||| |||||||| |
|
|
| T |
28234570 |
ggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgt |
28234634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 222
Target Start/End: Original strand, 28325387 - 28325549
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| ||||||||||| || ||||| ||||||||||||||||| | |||| ||| ||| |||| | ||||||||||||||| || |||||| |
|
|
| T |
28325387 |
ttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttcaa |
28325486 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcct |
222 |
Q |
| |
|
||||||| ||||| | ||| ||||| || ||||||||||||||||||||||| |||||| |
|
|
| T |
28325487 |
cgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcct |
28325549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 28139451 - 28139615
Alignment:
| Q |
64 |
agaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaag-ggaatccacaccttcattgatgaccgtgaacttcaaaga |
162 |
Q |
| |
|
||||| ||||||||||| | |||||||||||||||||||||||| |||||| | || | ||||||||||| || |||||||| | || |||||| || |
|
|
| T |
28139451 |
agaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgt-gactgtggaatccacacttttattgatgatagggagcttcaagga |
28139549 |
T |
|
| Q |
163 |
ggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||||| ||||| ||| ||||||| ||| ||||||||||| ||||||||||| || ||||||||| |
|
|
| T |
28139550 |
ggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttt |
28139615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 221
Target Start/End: Original strand, 25579617 - 25579786
Alignment:
| Q |
52 |
ttcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtg |
151 |
Q |
| |
|
||||||| ||| ||||| ||||||||||| || ||| || || |||||||| ||||||||| | |||||||| | |||||| ||||||| || |
|
|
| T |
25579617 |
ttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgataatg |
25579716 |
T |
|
| Q |
152 |
aacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
| ||||||||||| |||||||||| ||||||||| | || ||||||||||| ||||||||||||||||| |
|
|
| T |
25579717 |
atcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcc |
25579786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 221
Target Start/End: Original strand, 25481640 - 25481809
Alignment:
| Q |
52 |
ttcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtg |
151 |
Q |
| |
|
||||||||||| || || ||||||||||| || ||| || || |||||||| ||||||||| | |||||||| | || ||||||||||| || |
|
|
| T |
25481640 |
ttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaaaatg |
25481739 |
T |
|
| Q |
152 |
aacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
| ||||||||||| |||||||||| ||||||||| | || ||||||||||| |||||||||| |||||| |
|
|
| T |
25481740 |
atcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcc |
25481809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 28226856 - 28227020
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| | ||||||||| || ||||| |||||||||||||||| | |||| || |||||||| ||||| ||| ||||||| | || |||||| |
|
|
| T |
28226856 |
ttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaa |
28226955 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgt |
224 |
Q |
| |
|
||||||||||||| | | ||||||| || | ||||||||| ||||||||||| |||||||| |
|
|
| T |
28226956 |
ggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgt |
28227020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 224
Target Start/End: Complemental strand, 28297994 - 28297830
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| |||||||| || ||| |||| | |||||||||| |||| | |||| ||| |||||||| | |||||||||||||||| | || ||| || |
|
|
| T |
28297994 |
ttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatctttgtaggaagggaattcgcaccttcattgatgacagagagcttaaa |
28297895 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgt |
224 |
Q |
| |
|
||||||| ||||| | ||||||||| || |||||||||| |||||||||| |||||||| |
|
|
| T |
28297894 |
ggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgt |
28297830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 28514079 - 28514243
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| |||||||| || ||| |||| | |||||||||| |||| | |||| ||| |||||||| | |||||||||||||||| | || ||| || |
|
|
| T |
28514079 |
ttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatctttgtaggaagggaattcgcaccttcattgatgacagagagcttaaa |
28514178 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgt |
224 |
Q |
| |
|
||||||| ||||| | ||||||||| || |||||||||| |||||||||| |||||||| |
|
|
| T |
28514179 |
ggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgt |
28514243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 26142847 - 26142932
Alignment:
| Q |
136 |
ttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
||||||||||| ||| ||| ||||||| |||||||||| ||||||||| | || ||||||||||| ||||||||||||||||| |
|
|
| T |
26142847 |
ttcattgatgataatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcc |
26142932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 28181021 - 28181181
Alignment:
| Q |
61 |
tttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaa |
160 |
Q |
| |
|
|||||||| |||||||||| || ||||| |||||||||||| | | |||||| | |||||||||| |||||||| |||||| | || |||||| |
|
|
| T |
28181021 |
tttagaggtggtgacactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaag |
28181120 |
T |
|
| Q |
161 |
gaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
||||||| ||||| | | ||||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
28181121 |
gaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcc |
28181181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 28185273 - 28185433
Alignment:
| Q |
61 |
tttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaa |
160 |
Q |
| |
|
|||||||| ||||||||||| || |||| |||||||||||| | | |||||| | |||||||||| |||||||| |||||| | || |||||| |
|
|
| T |
28185273 |
tttagaggtagtgacactcgttatcgttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaag |
28185372 |
T |
|
| Q |
161 |
gaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
||||||| ||||| | | ||||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
28185373 |
gaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcc |
28185433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 221
Target Start/End: Original strand, 26075794 - 26075963
Alignment:
| Q |
52 |
ttcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtg |
151 |
Q |
| |
|
||||||||||| || || ||||||||||| || ||| || || |||||||| ||||||||| | |||||||| | || ||||||||||| || |
|
|
| T |
26075794 |
ttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatg |
26075893 |
T |
|
| Q |
152 |
aacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
| ||||||||||| |||||||||| | ||||||| | || ||||| ||||| ||| ||||||||||||| |
|
|
| T |
26075894 |
atcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcc |
26075963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 25507092 - 25507029
Alignment:
| Q |
158 |
aaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
||||||| |||||||||| ||||||| ||| | ||||||||||| ||||||||||||||||| |
|
|
| T |
25507092 |
aaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattcc |
25507029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 27665385 - 27665311
Alignment:
| Q |
73 |
gacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgac |
147 |
Q |
| |
|
|||||||||| |||||||| || || ||||| ||||||||| || || |||||||||||||||||||||||| |
|
|
| T |
27665385 |
gacactcgatttggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattgatgac |
27665311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 26055908 - 26055993
Alignment:
| Q |
136 |
ttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
||||||||||| ||| ||||||||||| |||||||||| | ||||||| | || ||||| ||||| ||| ||||||||||||| |
|
|
| T |
26055908 |
ttcattgatgaaaatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcc |
26055993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 124; Significance: 6e-64; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 18724412 - 18724185
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || |||||| |||||||| ||||||| || || || ||||||||||| ||||||| ||||| ||| |
|
|
| T |
18724412 |
caatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatc |
18724313 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18724312 |
tctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattga |
18724213 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||| || |||||||||||| |
|
|
| T |
18724212 |
agagtctaggatcttcattcctgtgttt |
18724185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 18655804 - 18655577
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || |||||| |||||||| ||||||| || || || ||||||||||| ||||||| ||||| ||| |
|
|
| T |
18655804 |
caatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatc |
18655705 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||||||| ||||||||| | |
|
|
| T |
18655704 |
tctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattca |
18655605 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||| ||||||||||||||| |
|
|
| T |
18655604 |
agagtctaggatctttattcctgtgttt |
18655577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 18679894 - 18679667
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| | ||||||| ||||| || |||||| |||||||| ||||||| || || || ||||||||||| ||||||| ||||| ||| |
|
|
| T |
18679894 |
caatcaccttcctcattctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatc |
18679795 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18679794 |
tctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattga |
18679695 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||| || |||||||||||| |
|
|
| T |
18679694 |
agagtctaggatcttcattcctgtgttt |
18679667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 18731831 - 18731604
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || |||||| |||||||| ||||||| || || || ||||||||||| ||||||| ||||| ||| |
|
|
| T |
18731831 |
caatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatc |
18731732 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18731731 |
tctacagagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattga |
18731632 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||| || |||||||||||| |
|
|
| T |
18731631 |
agagtctaggatcttcattcctgtgttt |
18731604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 18699727 - 18699500
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || |||||| |||||||| ||||||| || || || | ||||||||| ||||||| ||||| ||| |
|
|
| T |
18699727 |
caatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatc |
18699628 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18699627 |
tctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattga |
18699528 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||| || |||||||||||| |
|
|
| T |
18699527 |
agagtctaggatcttcattcctgtgttt |
18699500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 29274110 - 29273883
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||| || || |||||| ||||| || |||||||| |||||||| |||||||||| ||||||| | ||| ||| |
|
|
| T |
29274110 |
caatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatc |
29274011 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||| |||| |||||| |
|
|
| T |
29274010 |
tctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcattga |
29273911 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||||||||| |||||||||||||||||| |
|
|
| T |
29273910 |
agagtctagaatttttattcctgtgttt |
29273883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 213
Target Start/End: Original strand, 31903770 - 31903910
Alignment:
| Q |
73 |
gacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaa |
172 |
Q |
| |
|
|||||||| || ||||| ||||||||||||||||| |||||| | ||||||||||||||||| ||||| || |||||||||||||| |||||| |
|
|
| T |
31903770 |
gacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacctttattgacgatgaagaacttcaaagaggacatgaaa |
31903869 |
T |
|
| Q |
173 |
tcaaaccatcactcgaaaatgccattgaagagtctaggatt |
213 |
Q |
| |
|
||| ||||||||| | | || |||||||||||||||||| |
|
|
| T |
31903870 |
tcacaccatcacttttagaggcaattgaagagtctaggatt |
31903910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 268684 - 268457
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||| || || |||| ||||| || |||||||| || ||||| |||||||||| | ||||| | ||| ||| |
|
|
| T |
268684 |
caatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcgtgagggttttattggccatc |
268585 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
268584 |
tctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcgacaatgccattga |
268485 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
268484 |
agagtctaggatttttattcctgtgttt |
268457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 227
Target Start/End: Complemental strand, 28164681 - 28164463
Alignment:
| Q |
9 |
ttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaag |
108 |
Q |
| |
|
|||||||||||||||||||||| || |||||| ||||||||| ||||||| |||||| || ||||||||||| ||||||||||||| ||||||| ||| |
|
|
| T |
28164681 |
ttcctcttcctcttcaatttcctatggattcacataccaagtgttcctcagttttaggggcagtgacactcgtgacggtttcactggccatctctataag |
28164582 |
T |
|
| Q |
109 |
gctctt-actagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtct |
207 |
Q |
| |
|
|| ||| || | |||||||| ||||| ||||||||||| |||| ||| | ||||| || ||||||| ||| ||| || || ||||||||| | ||| |
|
|
| T |
28164581 |
gcccttgacga-caagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatct |
28164483 |
T |
|
| Q |
208 |
aggatttttattcctgtgtt |
227 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
28164482 |
tgaatttttattcctgtgtt |
28164463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 28127993 - 28127783
Alignment:
| Q |
15 |
ttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctctt |
114 |
Q |
| |
|
|||||||||||||||| || |||||| ||||||||| ||||||| || || || ||||||||||| ||||||||||||| ||||||||||||| ||| |
|
|
| T |
28127993 |
ttcctcttcaatttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctt |
28127894 |
T |
|
| Q |
115 |
actagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtg-atgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatt |
213 |
Q |
| |
|
| |||||||||||||| ||||||||||| || | ||| | ||||| | | |||||| ||| ||||| ||| ||||||||||| ||||| ||| |
|
|
| T |
28127893 |
tatgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaatt |
28127794 |
T |
|
| Q |
214 |
tttattcctgt |
224 |
Q |
| |
|
||||||||||| |
|
|
| T |
28127793 |
tttattcctgt |
28127783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 104; Significance: 5e-52; HSPs: 3)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 3762 - 3535
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || |||||| |||||||| ||||| | |||||| || | ||||||||| ||||||| || ||||||| |
|
|
| T |
3762 |
caatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatc |
3663 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || |||||||| |
|
|
| T |
3662 |
tctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattga |
3563 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
3562 |
tgaatctaggatttttattcctgtgttt |
3535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 14695 - 14468
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||| ||||| ||||| || |||||| |||||||| ||| ||| |||||| || | ||||||||| ||||||| || ||||||| |
|
|
| T |
14695 |
caatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatc |
14596 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || |||||||| |
|
|
| T |
14595 |
tctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattga |
14496 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
14495 |
tgaatctaggatttttattcctgtgttt |
14468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8141 - 8062
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcg |
80 |
Q |
| |
|
|||||||||||||| ||||||||| | |||||| |||||| |||||||| ||||||| |||||| || | ||||||||| |
|
|
| T |
8141 |
caatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcg |
8062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 5011 - 4784
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||||||||||||| ||||||||| ||||| || |||||| |||||||| ||||||| |||||| || | ||||||||| ||||||| || ||||||| |
|
|
| T |
5011 |
caatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatc |
4912 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||||||||||||| ||| ||||||||||| |||||||||| |||||| ||| || |||||||| |
|
|
| T |
4911 |
tctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattga |
4812 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
4811 |
tgaatctaggatttttattcctgtgttt |
4784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 13972 - 13745
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| | ||||| |||||||| ||||||| |||||| || | ||||||||| ||||||| || || |||| |
|
|
| T |
13972 |
caattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatc |
13873 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || ||||| || |
|
|
| T |
13872 |
tctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcga |
13773 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
13772 |
agaatctaggatttttattcctgtgttt |
13745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1254 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1254
Description:
Target: scaffold1254; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 257 - 30
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
||||||||| |||||||||||||| |||| || ||||| |||||||| ||||| | |||||| || | ||||||||| ||||||| || || |||| |
|
|
| T |
257 |
caatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatc |
158 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || ||||| || |
|
|
| T |
157 |
tctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcga |
58 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
57 |
agaatctaggatttttattcctgtgttt |
30 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 7372 - 7599
Alignment:
| Q |
1 |
caatcaccttcctcttcctcttcaatttcccatagattcaaataccaagtattcctcaattttagaggaagtgacactcgatacggtttcactggaaatc |
100 |
Q |
| |
|
||||||||| |||||||||||||| |||| || ||||| |||||||| ||||| | |||||| || | ||||||||| ||||||| || || |||| |
|
|
| T |
7372 |
caatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatc |
7471 |
T |
|
| Q |
101 |
tctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||||||||||||| ||| ||||||||||| |||||||||| |||||||||| || ||||| || |
|
|
| T |
7472 |
tctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcga |
7571 |
T |
|
| Q |
201 |
agagtctaggatttttattcctgtgttt |
228 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
7572 |
agaatctaggatttttattcctgtgttt |
7599 |
T |
|
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Target: scaffold0038 (Bit Score: 61; Significance: 2e-26; HSPs: 4)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 42872 - 43036
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| ||||||||||| || ||||| ||||||||||||||||| | |||| || |||||||| | |||||||||||||||| | ||||||| | |
|
|
| T |
42872 |
ttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagagaacttcca |
42971 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgt |
224 |
Q |
| |
|
||||||| |||| | ||||||||| || ||||||||||||||||||||||| |||||||| |
|
|
| T |
42972 |
ggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgt |
43036 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 34631 - 34795
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| ||||||||||| || ||||| || | ||||||||| | |||||| | ||||||||||||||||||||||||||| | || |||||| |
|
|
| T |
34631 |
ttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacagggagcttcaa |
34730 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgt |
224 |
Q |
| |
|
|||| |||||||| | ||||||||| || ||||||||||||||||||||||| |||||||| |
|
|
| T |
34731 |
ggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgt |
34795 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 222
Target Start/End: Original strand, 116702 - 116864
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| ||||||||||| || ||||| ||||||||||||||||| | |||| ||| ||| |||| | ||||||||||||||| || |||||| |
|
|
| T |
116702 |
ttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtaccttcattgatgacaaagaccttcaa |
116801 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcct |
222 |
Q |
| |
|
||||||| ||||| | ||| ||||| || ||||||||||||||||||||||| |||||| |
|
|
| T |
116802 |
cgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcct |
116864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 27354 - 27518
Alignment:
| Q |
60 |
ttttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaa |
159 |
Q |
| |
|
||||||||| | ||||||||| || ||||| |||||||||||||||| | |||| || |||||||| ||||| ||| ||||||| | || |||||| |
|
|
| T |
27354 |
ttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgatagagagcttcaa |
27453 |
T |
|
| Q |
160 |
agaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcctgt |
224 |
Q |
| |
|
||||||||||||| | | ||||||| || | ||||||||| ||||||||||| |||||||| |
|
|
| T |
27454 |
ggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgt |
27518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 221
Target Start/End: Complemental strand, 58562 - 58402
Alignment:
| Q |
61 |
tttagaggaagtgacactcgatacggtttcactggaaatctctacaaggctcttactagaaagggaatccacaccttcattgatgaccgtgaacttcaaa |
160 |
Q |
| |
|
|||||||| |||||||||| || ||||| |||||||||||||||| |||||| | |||||||||| |||||||| |||||| | || |||||| |
|
|
| T |
58562 |
tttagaggttgtgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaag |
58463 |
T |
|
| Q |
161 |
gaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
||||||| ||||| | ||||||||| || |||||| |||||||||||||||| ||||| |
|
|
| T |
58462 |
gaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggattttcattcc |
58402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 221
Target Start/End: Original strand, 3279666 - 3279755
Alignment:
| Q |
132 |
caccttcattgatgaccgtgaacttcaaagaggtgatgaaatcaaaccatcactcgaaaatgccattgaagagtctaggatttttattcc |
221 |
Q |
| |
|
||||||||||||||| | || ||||| ||||||||||||||| || |||||| | || ||||| |||||||| | |||||||||||| |
|
|
| T |
3279666 |
caccttcattgatgatagggagcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattcc |
3279755 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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