View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5630_low_3 (Length: 375)

Name: NF5630_low_3
Description: NF5630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5630_low_3
NF5630_low_3
[»] scaffold0131 (1 HSPs)
scaffold0131 (40-128)||(29100-29188)
[»] chr6 (14 HSPs)
chr6 (40-131)||(10197459-10197550)
chr6 (40-126)||(23149332-23149418)
chr6 (40-127)||(30890814-30890901)
chr6 (44-126)||(31185861-31185943)
chr6 (40-126)||(11972245-11972326)
chr6 (40-100)||(23155020-23155080)
chr6 (77-125)||(24202627-24202675)
chr6 (77-119)||(4212736-4212778)
chr6 (94-128)||(10198997-10199031)
chr6 (94-128)||(12576869-12576903)
chr6 (94-126)||(15339385-15339417)
chr6 (93-125)||(18864486-18864518)
chr6 (80-123)||(23149285-23149326)
chr6 (98-126)||(24200920-24200948)
[»] scaffold0090 (1 HSPs)
scaffold0090 (40-126)||(41176-41262)
[»] chr4 (12 HSPs)
chr4 (13-128)||(13236137-13236252)
chr4 (40-126)||(37519373-37519459)
chr4 (40-126)||(37523589-37523675)
chr4 (40-127)||(35863959-35864046)
chr4 (40-126)||(1864958-1865044)
chr4 (40-127)||(6254103-6254191)
chr4 (40-127)||(49779997-49780085)
chr4 (40-126)||(610984-611076)
chr4 (77-127)||(55549961-55550011)
chr4 (77-127)||(49716671-49716721)
chr4 (94-126)||(795699-795731)
chr4 (97-126)||(14288639-14288668)
[»] chr1 (13 HSPs)
chr1 (40-128)||(24493725-24493813)
chr1 (40-128)||(48770622-48770710)
chr1 (40-127)||(37384073-37384160)
chr1 (40-120)||(27347019-27347099)
chr1 (40-126)||(6300525-6300611)
chr1 (61-128)||(2349461-2349528)
chr1 (77-127)||(52508116-52508166)
chr1 (77-131)||(16650056-16650110)
chr1 (94-127)||(16048435-16048468)
chr1 (94-127)||(28969511-28969544)
chr1 (94-126)||(7102780-7102812)
chr1 (94-126)||(25066553-25066585)
chr1 (94-126)||(14862415-14862447)
[»] scaffold0316 (1 HSPs)
scaffold0316 (13-126)||(8595-8707)
[»] chr7 (7 HSPs)
chr7 (40-127)||(12773141-12773228)
chr7 (40-126)||(12730731-12730817)
chr7 (77-127)||(42239870-42239920)
chr7 (78-128)||(46053530-46053580)
chr7 (95-127)||(7044592-7044624)
chr7 (94-126)||(12727309-12727341)
chr7 (94-126)||(42074059-42074091)
[»] chr5 (13 HSPs)
chr5 (40-127)||(30322379-30322466)
chr5 (40-126)||(8424637-8424723)
chr5 (40-127)||(37379953-37380040)
chr5 (40-128)||(2254365-2254452)
chr5 (40-127)||(27890287-27890374)
chr5 (40-123)||(37265974-37266057)
chr5 (77-127)||(24622701-24622751)
chr5 (77-126)||(10031981-10032030)
chr5 (77-127)||(3868222-3868272)
chr5 (77-126)||(3700878-3700927)
chr5 (94-125)||(14184606-14184637)
chr5 (94-128)||(4057221-4057255)
chr5 (93-125)||(6095206-6095238)
[»] chr2 (14 HSPs)
chr2 (40-130)||(28659302-28659392)
chr2 (40-127)||(39435843-39435930)
chr2 (40-126)||(33351646-33351732)
chr2 (40-126)||(37818139-37818225)
chr2 (40-125)||(41912404-41912489)
chr2 (77-133)||(26912893-26912949)
chr2 (77-127)||(24255452-24255502)
chr2 (78-127)||(2870628-2870677)
chr2 (77-128)||(3650533-3650584)
chr2 (77-126)||(21418817-21418866)
chr2 (40-126)||(11042388-11042474)
chr2 (94-126)||(24270556-24270588)
chr2 (94-126)||(40483710-40483742)
chr2 (94-126)||(3564632-3564664)
[»] chr8 (16 HSPs)
chr8 (40-125)||(30334002-30334087)
chr8 (40-126)||(25200563-25200649)
chr8 (41-128)||(7782692-7782779)
chr8 (41-128)||(7831966-7832053)
chr8 (40-129)||(18665943-18666032)
chr8 (77-127)||(14787572-14787622)
chr8 (77-127)||(14787795-14787845)
chr8 (77-127)||(14788018-14788068)
chr8 (77-127)||(14788241-14788291)
chr8 (77-127)||(14788464-14788514)
chr8 (78-127)||(14787350-14787399)
chr8 (40-129)||(23102937-23103026)
chr8 (77-126)||(14788685-14788734)
chr8 (94-126)||(4971292-4971324)
chr8 (94-128)||(14105027-14105061)
chr8 (94-126)||(33854788-33854820)
[»] scaffold0376 (1 HSPs)
scaffold0376 (40-129)||(14196-14285)
[»] chr3 (10 HSPs)
chr3 (40-127)||(43113-43200)
chr3 (40-127)||(10118505-10118592)
chr3 (50-117)||(10255563-10255630)
chr3 (77-128)||(37797236-37797287)
chr3 (78-127)||(15321309-15321358)
chr3 (77-126)||(27276354-27276403)
chr3 (78-126)||(10050011-10050059)
chr3 (78-126)||(11820567-11820615)
chr3 (94-127)||(682684-682717)
chr3 (94-129)||(41756767-41756802)
[»] scaffold0118 (1 HSPs)
scaffold0118 (77-127)||(19049-19099)
[»] scaffold0003 (1 HSPs)
scaffold0003 (78-126)||(192877-192925)
[»] scaffold0770 (1 HSPs)
scaffold0770 (77-127)||(4585-4635)
[»] scaffold0029 (2 HSPs)
scaffold0029 (77-127)||(102889-102939)
scaffold0029 (94-129)||(133356-133391)
[»] scaffold0025 (1 HSPs)
scaffold0025 (95-128)||(22120-22153)
[»] scaffold0012 (1 HSPs)
scaffold0012 (94-127)||(53001-53034)
[»] scaffold0583 (1 HSPs)
scaffold0583 (94-126)||(5847-5879)
[»] scaffold0073 (4 HSPs)
scaffold0073 (95-127)||(13425-13457)
scaffold0073 (40-127)||(48409-48496)
scaffold0073 (40-126)||(48664-48750)
scaffold0073 (40-126)||(53195-53281)
[»] scaffold0002 (1 HSPs)
scaffold0002 (94-129)||(311184-311219)
[»] scaffold0356 (1 HSPs)
scaffold0356 (94-128)||(2460-2494)
[»] scaffold0276 (1 HSPs)
scaffold0276 (94-127)||(181-214)
[»] scaffold0281 (1 HSPs)
scaffold0281 (94-126)||(9808-9840)
[»] scaffold0196 (1 HSPs)
scaffold0196 (94-126)||(25528-25560)
[»] scaffold0150 (1 HSPs)
scaffold0150 (94-126)||(8039-8071)


Alignment Details
Target: scaffold0131 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 29100 - 29188
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29100 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaataggtcctaaatttatattatatagatta 29188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 8e-40; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 10197459 - 10197550
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagattacaa 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  10197459 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaatgggtcataaatttatattatatagattacaa 10197550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 23149418 - 23149332
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23149418 gaaagggacatgtggcaacaccaaaacaataataattcatttccataaaagtctatgaaataggtcctaaatttatattatatagat 23149332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 30890814 - 30890901
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  30890814 gaaagggacatgtggcaacaccaaaacaacagtaattcatttccataaaagtctatgaaatggatcctaaatttatattatatagatt 30890901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 44 - 126
Target Start/End: Original strand, 31185861 - 31185943
Alignment:
Q  44 gggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  || |||||||||||||| ||||||    
T  31185861 gggacatgtggcaataccaaaacaatagtaattcatttccataaaagtctatgaaatgagttctaaatttatattagatagat 31185943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 11972326 - 11972245
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||     || |||||||||| |||| ||||||||||||||||||||    
T  11972326 gaaagggacatgtggcaacaccaaaacaatagtaattcatttc-----aagtctatgaaatgggtcataaatttatattatatagat 11972245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 23155080 - 23155020
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaat 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  23155080 gaaagggacatgtggcaacaccaaaacaataataattcatttccataaaagtctatgaaat 23155020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 24202627 - 24202675
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatataga 125  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  24202627 catttccatataaagctatgaaataggtcctaaatttatattatataga 24202675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 4212778 - 4212736
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatatta 119  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  4212778 catttccataaaaagctatgaaataggtcataaatttatatta 4212736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 10198997 - 10199031
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||||||||||||||||||||||||||||||    
T  10198997 atgaaataggtcctaaatttatattatatagatta 10199031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 12576869 - 12576903
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||||||||||||||||||||||||||||||    
T  12576869 atgaaataggtcctaaatttatattatatagatta 12576903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 15339385 - 15339417
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||    
T  15339385 atgaaataggtcctaaatttatattatatagat 15339417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 18864486 - 18864518
Alignment:
Q  93 tatgaaataggtcctaaatttatattatataga 125  Q
    |||||||||||||||||||||||||||||||||    
T  18864486 tatgaaataggtcctaaatttatattatataga 18864518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 123
Target Start/End: Complemental strand, 23149326 - 23149285
Alignment:
Q  80 ttccataaaaatctatgaaataggtcctaaatttatattatata 123  Q
    |||||||||| ||||||||||||  |||||||||||||||||||    
T  23149326 ttccataaaagtctatgaaatag--cctaaatttatattatata 23149285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 24200920 - 24200948
Alignment:
Q  98 aataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||    
T  24200920 aataggtcctaaatttatattatatagat 24200948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 41262 - 41176
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41262 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcttaaatttatattatatagat 41176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 13236252 - 13236137
Alignment:
Q  13 aatatggtgagaacatttgtnnnnnnngaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatt 112  Q
    |||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  13236252 aatatggtgagagcatttgtaaaaaatgaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctataaaataggtcctaaatt 13236153  T
Q  113 tatattatatagatta 128  Q
    ||||||||||||||||    
T  13236152 tatattatatagatta 13236137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 37519459 - 37519373
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  37519459 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggtcctaaatttatattatatagat 37519373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 37523675 - 37523589
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  37523675 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggtcctaaatttatattatatagat 37523589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 35863959 - 35864046
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||||||    
T  35863959 gaaagggacatgtggcaacaccaaaacaatagtaattcatttctataaaagtctatgaaatgggtcctaaatttacattatatagatt 35864046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 1864958 - 1865044
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  1864958 gaaagggacatgtgacaacaccaaaacaataataattcatttccataaaagtctatgaaatggatcctaaatttatattatatagat 1865044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 6254103 - 6254191
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatg-aaataggtcctaaatttatattatatagatt 127  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| | ||||||||||||||||||||||||    
T  6254103 gaaagtgacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaaatggatcctaaatttatattatatagatt 6254191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 49780085 - 49779997
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaa-caatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  49780085 gaaagggatatgtggcaacaccaaaaacaatagtaattcatttccataaaagtctatgaaatgggttctaaatttatattatatagatt 49779997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 611076 - 610984
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcattt------ccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    ||||||||||||||||||||||||||||||||||||||||||      |||||||| |||||||||| |||| ||||||||||||||||||||    
T  611076 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccatttccataaaagtctatgaaatgggtcataaatttatattatatagat 610984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 55550011 - 55549961
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55550011 catttccataaaaagctatgaaataggtcctaaatttatattatatagatt 55549961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 49716671 - 49716721
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  49716671 catttccataaaagtctatgaaatggatcctaaatttatattatatagatt 49716721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 795699 - 795731
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||    
T  795699 atgaaataggtcctaaatttatattatatagat 795731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 14288668 - 14288639
Alignment:
Q  97 aaataggtcctaaatttatattatatagat 126  Q
    ||||||||||||||||||||||||||||||    
T  14288668 aaataggtcctaaatttatattatatagat 14288639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 24493813 - 24493725
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  24493813 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggtcctaaatttatattatatagatta 24493725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 48770710 - 48770622
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  48770710 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggtcctaaatttatattatatagatta 48770622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 37384160 - 37384073
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  37384160 gaaagggacatgtggcaacaccaaaacaatagtaattcatttctataaaagtctatgaaatgggtcctaaatttatattatatagatt 37384073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 27347019 - 27347099
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattat 120  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  27347019 gaaagggacatgtggcaacaccaaaacaatagtaatttatttccataaaagtctatgaaataggtcctaaatttatattat 27347099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 6300611 - 6300525
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  6300611 gaaagggacatgtggcaacaccaaaataataataattcaattccataaaagtctatgaaataggtcctaaatttatattatatagat 6300525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 2349461 - 2349528
Alignment:
Q  61 caaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    |||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  2349461 caaaacgatagtaattcatttccataaaagtctatgaaatgggtcctaaatttatattatatagatta 2349528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 52508116 - 52508166
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52508116 catttccataaaaagctatgaaataggtcctaaatttatattatatagatt 52508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 16650110 - 16650056
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagattacaa 131  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  16650110 catttccataaaagtctatgaaatgggtactaaatttatattatatagataacaa 16650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 16048435 - 16048468
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||||||||||||||||||||||||    
T  16048435 atgaaataggtcctaaatttatattatatagatt 16048468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 28969511 - 28969544
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||||||||||||||||||||||||    
T  28969511 atgaaataggtcctaaatttatattatatagatt 28969544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 7102780 - 7102812
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||    
T  7102780 atgaaataggtcctaaatttatattatatagat 7102812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 25066585 - 25066553
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||    
T  25066585 atgaaataggtcctaaatttatattatatagat 25066553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 14862415 - 14862447
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||| ||||||||||||||||||||||||||    
T  14862415 atgaaacaggtcctaaatttatattatatagat 14862447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 8595 - 8707
Alignment:
Q  13 aatatggtgagaacatttgtnnnnnnngaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatt 112  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  8595 aatatggtgagaacatttgtaaaaaa-gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggtcctaaatt 8693  T
Q  113 tatattatatagat 126  Q
    ||||||||||||||    
T  8694 tatattatatagat 8707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 12773228 - 12773141
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  12773228 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggtcctaaatttatattatatagatt 12773141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 12730731 - 12730817
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  12730731 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggtcctaaatttatattatatagat 12730817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 42239870 - 42239920
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42239870 catttccataaaaagctatgaaataggtcctaaatttatattatatagatt 42239920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 46053530 - 46053580
Alignment:
Q  78 atttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46053530 atttccataaaaagctatgaaataggtcctaaatttatattatatagatta 46053580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 127
Target Start/End: Original strand, 7044592 - 7044624
Alignment:
Q  95 tgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||||||||||||||||||||||    
T  7044592 tgaaataggtcctaaatttatattatatagatt 7044624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 12727309 - 12727341
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    ||||||||| |||||||||||||||||||||||    
T  12727309 atgaaatagatcctaaatttatattatatagat 12727341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 42074091 - 42074059
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    ||||||||| |||||||||||||||||||||||    
T  42074091 atgaaatagatcctaaatttatattatatagat 42074059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 30322379 - 30322466
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  30322379 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatatgtcctaaatttatattatatagatt 30322466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 8424723 - 8424637
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  8424723 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggtcctaaatttatattatatagat 8424637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 37379953 - 37380040
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  37379953 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatggttcctaaatttatattatatagatt 37380040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 2254452 - 2254365
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  2254452 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccat-aaaatctatgaaatggatcctaaatttatattatatagatta 2254365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 27890287 - 27890374
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  27890287 gaaagggatatgtggcaacaccaaaacaatagcaattcatttccataaaagtctatgaaatgggtcctaaatttatattatatagatt 27890374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 37265974 - 37266057
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatata 123  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  37265974 gaaatggacatgtggcaacaccaaaagaatagtaattcatttccataaaagtctatgaaatggatcctaaatttatattatata 37266057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 24622751 - 24622701
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24622751 catttccataaaaagctatgaaataggtcctaaatttatattatatagatt 24622701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 10031981 - 10032030
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10031981 catttccataaaaagctatgaaataggtcctaaatttatattatatagat 10032030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 3868272 - 3868222
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  3868272 catttccttataaagctatgaaataggtcctaaatttatattatatagatt 3868222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 3700878 - 3700927
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    ||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  3700878 catttccttataaagctatgaaataggtcctaaatttatattatatagat 3700927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 14184637 - 14184606
Alignment:
Q  94 atgaaataggtcctaaatttatattatataga 125  Q
    ||||||||||||||||||||||||||||||||    
T  14184637 atgaaataggtcctaaatttatattatataga 14184606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 4057221 - 4057255
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatta 128  Q
    ||||||||| |||||||||||||||||||||||||    
T  4057221 atgaaatagatcctaaatttatattatatagatta 4057255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 6095206 - 6095238
Alignment:
Q  93 tatgaaataggtcctaaatttatattatataga 125  Q
    ||||||||| |||||||||||||||||||||||    
T  6095206 tatgaaataagtcctaaatttatattatataga 6095238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 28659392 - 28659302
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagattaca 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  28659392 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggttctaaatttatattatatagattaca 28659302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 39435930 - 39435843
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  39435930 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctataaaataggtcataaatttatattatatagatt 39435843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 33351646 - 33351732
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||    
T  33351646 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctacgaaatgggtcctaaatttatattatatagat 33351732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 37818225 - 37818139
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  37818225 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggttctaaatttatattatatagat 37818139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 41912489 - 41912404
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatataga 125  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  41912489 gaaagggacatgtggcaacaccaaaacaatagtagttcatttccataaaagtctatgaaatgggtcataaatttatattatataga 41912404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 26912949 - 26912893
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagattacaaga 133  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  26912949 catttccataaaaagctatgaaataggtcctaaatttatattatatagattaaaaga 26912893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 24255502 - 24255452
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24255502 catttccataaaaagctatgaaataggtcctaaatttatattatatagatt 24255452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 2870677 - 2870628
Alignment:
Q  78 atttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2870677 atttccataaaaagctatgaaataggtcctaaatttatattatatagatt 2870628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 3650533 - 3650584
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  3650533 catttccatataaagctatgaaataggtcctaaatttatattatatagatta 3650584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 21418817 - 21418866
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  21418817 catttccataaaaagctatgaaataggtcataaatttatattatatagat 21418866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 11042388 - 11042474
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    ||||||||||  |||||||||||||| |||||||| | | ||||||| |     |||||||||||| ||||||||||||||||||||    
T  11042388 gaaagggacacatggcaacaccaaaagaatagtaaattacttccatatagggacatgaaataggtcttaaatttatattatatagat 11042474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 24270556 - 24270588
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||    
T  24270556 atgaaataggtcctaaatttatattatatagat 24270588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 40483742 - 40483710
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||    
T  40483742 atgaaataggtcctaaatttatattatatagat 40483710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 3564664 - 3564632
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    ||||||||| |||||||||||||||||||||||    
T  3564664 atgaaatagatcctaaatttatattatatagat 3564632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 30334002 - 30334087
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatataga 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  30334002 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgggtcctaaatttatattatataga 30334087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 25200649 - 25200563
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  25200649 gaaagagacatgtggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatagatcctaaatttatattatatagat 25200563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 7782692 - 7782779
Alignment:
Q  41 aaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||    
T  7782692 aaagggacatgtggcaagaccaaaacaatagtaattcatttccataaaagtctatgagatgggtcctaaatttatattatatagatta 7782779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 7831966 - 7832053
Alignment:
Q  41 aaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||    
T  7831966 aaagggacatgtggcaagaccaaaacaatagtaattcatttccataaaagtctatgagatgggtcctaaatttatattatatagatta 7832053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 18665943 - 18666032
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagattac 129  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||    
T  18665943 gaaagggacatgtggcaccaccaaaacaatagtaatttattttcataaaagtctatgaaatgggtcctaaatttatattatatagattac 18666032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 14787572 - 14787622
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14787572 catttccatataaagctatgaaataggtcctaaatttatattatatagatt 14787622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 14787795 - 14787845
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14787795 catttccatataaagctatgaaataggtcctaaatttatattatatagatt 14787845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 14788018 - 14788068
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14788018 catttccatataaagctatgaaataggtcctaaatttatattatatagatt 14788068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 14788241 - 14788291
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14788241 catttccatataaagctatgaaataggtcctaaatttatattatatagatt 14788291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 14788464 - 14788514
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14788464 catttccatataaagctatgaaataggtcctaaatttatattatatagatt 14788514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 14787350 - 14787399
Alignment:
Q  78 atttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14787350 atttccatataaagctatgaaataggtcctaaatttatattatatagatt 14787399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 23103026 - 23102937
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagattac 129  Q
    ||||||||||  || ||||||||||| |||||||| | | ||||||| |    |||||||||||||||||||||||||||||||||||||    
T  23103026 gaaagggacacatgacaacaccaaaagaatagtaaattacttccatatagggatatgaaataggtcctaaatttatattatatagattac 23102937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 14788685 - 14788734
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  14788685 cattttcatataaagctatgaaataggtcctaaatttatattatatagat 14788734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 4971292 - 4971324
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||    
T  4971292 atgaaataggtcctaaatttatattatatagat 4971324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 14105061 - 14105027
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||| ||||||||||||||||||||||||||    
T  14105061 atgaaatatgtcctaaatttatattatatagatta 14105027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 33854820 - 33854788
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    ||||||||||||| |||||||||||||||||||    
T  33854820 atgaaataggtcccaaatttatattatatagat 33854788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 14285 - 14196
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagattac 129  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  14285 gaaagggacatgtagcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatgagtcctaaatttatattatatagattac 14196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 43113 - 43200
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  43113 gaaagggacatctggcaacaccaaaacaatagtaattcatttccataaaagtctatgaaatggatcctaaatttatattatatagatt 43200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 10118505 - 10118592
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  10118505 gaaagggacatatgacaacaccaaaacaatagtaattcatttccataaaagtctatgaaatggatcctaaatttatattatatagatt 10118592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 10255563 - 10255630
Alignment:
Q  50 tgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatat 117  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||||    
T  10255563 tgtggcaacaccaaaacaataataattcatttccataaatgtctatgaaatgggtcctaaatttatat 10255630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 37797287 - 37797236
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  37797287 catttccataaaaaactatgaaatagatcctaaatttatattatatagatta 37797236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 15321358 - 15321309
Alignment:
Q  78 atttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  15321358 atttcaataaaaagatatgaaataggtcctaaatttatattatatagatt 15321309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 27276354 - 27276403
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  27276354 catttctataaaaagttatgaaataggtcctaaatttatattatatagat 27276403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 10050011 - 10050059
Alignment:
Q  78 atttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  10050011 atttccataaaagtctatgaaatgggtcataaatttatattatatagat 10050059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 11820567 - 11820615
Alignment:
Q  78 atttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  11820567 atttccataaaagtctatgaaatgggtcataaatttatattatatagat 11820615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 682717 - 682684
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||||||||||||||||||||||||    
T  682717 atgaaataggtcctaaatttatattatatagatt 682684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 41756802 - 41756767
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagattac 129  Q
    ||||||||||||| ||||||||||||||||||||||    
T  41756802 atgaaataggtcccaaatttatattatatagattac 41756767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 19099 - 19049
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19099 catttccataaaaagctatgaaataggtcctaaatttatattatatagatt 19049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 192877 - 192925
Alignment:
Q  78 atttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  192877 atttccataaaagtctatgaaatgggtcctaaatttatattatatagat 192925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 4635 - 4585
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  4635 cattttcataaaaagctatgaaataggtcataaatttatattatatagatt 4585  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 102939 - 102889
Alignment:
Q  77 catttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  102939 cattttcataaaaagctatgaaataggtcataaatttatattatatagatt 102889  T

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Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 133391 - 133356
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagattac 129  Q
    |||||||||||| |||||||||||||||||||||||    
T  133391 atgaaataggtcataaatttatattatatagattac 133356  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 22120 - 22153
Alignment:
Q  95 tgaaataggtcctaaatttatattatatagatta 128  Q
    ||||||||||||||||||||||||||||||||||    
T  22120 tgaaataggtcctaaatttatattatatagatta 22153  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 53034 - 53001
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||||||||||||||||||||||||    
T  53034 atgaaataggtcctaaatttatattatatagatt 53001  T

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Target: scaffold0583 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 5879 - 5847
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||||||||||||||||||||||    
T  5879 atgaaataggtcctaaatttatattatatagat 5847  T

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Target: scaffold0073 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 127
Target Start/End: Original strand, 13425 - 13457
Alignment:
Q  95 tgaaataggtcctaaatttatattatatagatt 127  Q
    |||||||||||||||||||||||||||||||||    
T  13425 tgaaataggtcctaaatttatattatatagatt 13457  T

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Target: scaffold0073; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 48409 - 48496
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||  || ||||||||||| || || || | |||||||||||     ||||||||| ||||||||||||||||||||||||    
T  48409 gaaagggacacatgtcaacaccaaaagaagagaaaattatttccataaagggacatgaaatagttcctaaatttatattatatagatt 48496  T

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Target: scaffold0073; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 48664 - 48750
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    ||||||||||  || ||||||||||| || || || | |||||||||||     ||||||||| |||||||||||||||||||||||    
T  48664 gaaagggacacatgtcaacaccaaaagaagagaaaattatttccataaagggacatgaaatagttcctaaatttatattatatagat 48750  T

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Target: scaffold0073; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 53195 - 53281
Alignment:
Q  40 gaaagggacatgtggcaacaccaaaacaatagtaattcatttccataaaaatctatgaaataggtcctaaatttatattatatagat 126  Q
    ||||||||||  || ||||||||||| || || || | |||||||||||     ||||||||| |||||||||||||||||||||||    
T  53195 gaaagggacacatgtcaacaccaaaagaagagaaaattatttccataaagggacatgaaatagttcctaaatttatattatatagat 53281  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 311219 - 311184
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagattac 129  Q
    |||||||||||| |||||||||||||||||||||||    
T  311219 atgaaataggtcataaatttatattatatagattac 311184  T

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Target: scaffold0356 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 2494 - 2460
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatta 128  Q
    |||||||| ||||||||||||||||||||||||||    
T  2494 atgaaatatgtcctaaatttatattatatagatta 2460  T

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Target: scaffold0276 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 181 - 214
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagatt 127  Q
    ||||||||||||| ||||||||||||||||||||    
T  181 atgaaataggtcccaaatttatattatatagatt 214  T

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Target: scaffold0281 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 9840 - 9808
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||| ||||||||||||||||||||    
T  9840 atgaaataggtcttaaatttatattatatagat 9808  T

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Target: scaffold0196 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 25560 - 25528
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||||| ||||||||||||||||||    
T  25560 atgaaataggtcctgaatttatattatatagat 25528  T

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Target: scaffold0150 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 8039 - 8071
Alignment:
Q  94 atgaaataggtcctaaatttatattatatagat 126  Q
    |||||||||||| ||||||||||||||||||||    
T  8039 atgaaataggtcttaaatttatattatatagat 8071  T

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