View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5632-Insertion-6 (Length: 345)
Name: NF5632-Insertion-6
Description: NF5632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5632-Insertion-6 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 8 - 345
Target Start/End: Complemental strand, 30337173 - 30336837
Alignment:
| Q |
8 |
taaacatcaaaagatataattgtcattttattgtatgttaaataatactttcgcctacattcttgatttcaaaaatagtcgttgaaagctttgcacataa |
107 |
Q |
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| T |
30337173 |
taaacatcaaaagatataattgtcattttattgtatgttaaataatactttcgcctacattcttgatttcaaaaatagtcattgaaagctttgcacatta |
30337074 |
T |
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| Q |
108 |
attaaaaaactccgagcatcactaattttaagaaaatataatgatctgaatataatgctccatgtttaatatcaatcatttaaactcatttttaccaaat |
207 |
Q |
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| T |
30337073 |
attaaaaaactcc-agcatcactaattttaagaaaatataatgatctgaatataatgctccatgtttaatatcaatcatttaaactcatttttaccaaat |
30336975 |
T |
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| Q |
208 |
caatccttcaaactcaactctagtatatattctcaagtaacaactgaaatgggtgaaacatggataagttgtcacccacaaacactgaagcagcaaagac |
307 |
Q |
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| T |
30336974 |
caatccttcaaactcaactctagtatatattctcaagtaacaactgaaatgggtgaaacatggataagttgtcacccacaaacactgaagcagcaaagac |
30336875 |
T |
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| Q |
308 |
cacataaggccacataaaagtacacatgtaccggcagc |
345 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
30336874 |
cacataaggccacataaaagtacacatgtaccggcagc |
30336837 |
T |
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