View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5632_high_2 (Length: 357)
Name: NF5632_high_2
Description: NF5632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5632_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 338
Target Start/End: Original strand, 35563660 - 35563997
Alignment:
| Q |
1 |
ttgatcaacattctaactaattttgtccaaaataaaaatctaaccaatatgtttgcaaaataaatttaaacaacaaatgttagtattatttgcaaagaaa |
100 |
Q |
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| T |
35563660 |
ttgatcaacattctaactaattttgtccaaaataaaaatctaaccaatatgtttgcaaaataaatttaaacaacaaatgttagtattgtttgcaaagaaa |
35563759 |
T |
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| Q |
101 |
ttattaaatttgtctaaaaattggagatgggtttatttttcaaattctcattttgatagctaattattcttttaaaggaataattctattattttaggtg |
200 |
Q |
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| T |
35563760 |
ttatgaaatttgtctaaaaattagagacggatttatttttcaaattctcattttgatagctaattattcttttaaaggaattattctattattttaggtg |
35563859 |
T |
|
| Q |
201 |
taacctactttaagaaaaaagggtgtgttagttcttctataactattgtttttactatttgtttcgtaatgttttggaactatgtcacagtataaattga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35563860 |
taacctactttaagaaaaaagggtgtgttagttcttctataactattgtttttactatttgtttcgtaatgttttggaactatgtcacagtataaattga |
35563959 |
T |
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| Q |
301 |
aaatgacattttcttttatagaaatgaaagtgacgtat |
338 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
35563960 |
aaatgacattttcttttatagaaatgaaagtgacgtat |
35563997 |
T |
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